Jatropha Genome Database
- JcCA0136721.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0136721.10 - phase: 0
(256 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20720.2 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 | C... 399 e-112
AT5G20720.1 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 | C... 399 e-112
AT1G14980.1 | Symbols: CPN10 | CPN10 (CHAPERONIN 10); chaperone ... 57 1e-08
AT1G23100.1 | Symbols: | 10 kDa chaperonin, putative | chr1:819... 57 2e-08
AT3G60210.1 | Symbols: | chloroplast chaperonin 10, putative | ... 55 6e-08
>AT5G20720.2 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 |
CPN20 (CHAPERONIN 20); calmodulin binding |
chr5:7015015-7016354 FORWARD
Length = 253
Score = 399 bits (1026), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/256 (79%), Positives = 225/256 (87%), Gaps = 3/256 (1%)
Query: 1 MATAQLTASSISVTARNLASFEGLRPSTVKFASFGNLKAAGLSQRSFRGLVVKAATVVAP 60
MA QLTAS ++++AR+LAS +GLR S+VKF+S LK L Q FR LVVKAA+VVAP
Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKFSS---LKPGTLRQSQFRRLVVKAASVVAP 57
Query: 61 KYTSIKPLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGKTKLDISV 120
KYTSIKPLGDRVLVKIK AEEKT GGILLP+TAQSKPQGGEVVAVGEG+TIGK K+DI+V
Sbjct: 58 KYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITV 117
Query: 121 KTGAQVIYSKYAGTEVEFNGSPHLILKEDDIVGVLETDDIKDLKPCNDRVFIKVAEAEEK 180
TGAQ+IYSKYAGTEVEFN HLILKEDDIVG+LET+DIKDLKP NDRVFIKVAEAEEK
Sbjct: 118 PTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEK 177
Query: 181 TAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSITPGNTVLYSKYAGNDFKGSDG 240
TAGGLLLTE +KEKPSIGTVIAVGPG LDEEG PL ++ G+TVLYSKYAGNDFKG DG
Sbjct: 178 TAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDG 237
Query: 241 TNYIALRASDVMAVLS 256
+NYIALRASDVMA+LS
Sbjct: 238 SNYIALRASDVMAILS 253
>AT5G20720.1 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 |
CPN20 (CHAPERONIN 20); calmodulin binding |
chr5:7015015-7016354 FORWARD
Length = 253
Score = 399 bits (1026), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/256 (79%), Positives = 225/256 (87%), Gaps = 3/256 (1%)
Query: 1 MATAQLTASSISVTARNLASFEGLRPSTVKFASFGNLKAAGLSQRSFRGLVVKAATVVAP 60
MA QLTAS ++++AR+LAS +GLR S+VKF+S LK L Q FR LVVKAA+VVAP
Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKFSS---LKPGTLRQSQFRRLVVKAASVVAP 57
Query: 61 KYTSIKPLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGKTKLDISV 120
KYTSIKPLGDRVLVKIK AEEKT GGILLP+TAQSKPQGGEVVAVGEG+TIGK K+DI+V
Sbjct: 58 KYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITV 117
Query: 121 KTGAQVIYSKYAGTEVEFNGSPHLILKEDDIVGVLETDDIKDLKPCNDRVFIKVAEAEEK 180
TGAQ+IYSKYAGTEVEFN HLILKEDDIVG+LET+DIKDLKP NDRVFIKVAEAEEK
Sbjct: 118 PTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEK 177
Query: 181 TAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSITPGNTVLYSKYAGNDFKGSDG 240
TAGGLLLTE +KEKPSIGTVIAVGPG LDEEG PL ++ G+TVLYSKYAGNDFKG DG
Sbjct: 178 TAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDG 237
Query: 241 TNYIALRASDVMAVLS 256
+NYIALRASDVMA+LS
Sbjct: 238 SNYIALRASDVMAILS 253
>AT1G14980.1 | Symbols: CPN10 | CPN10 (CHAPERONIN 10); chaperone
binding | chr1:5165930-5166654 REVERSE
Length = 98
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 67 PLGDRVLVKIKVAEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGKTKL-DISVKTGAQ 125
P +R+LV+ + KTE GILLP + SK G+V+AVG G KL +SVK G
Sbjct: 7 PTFNRILVQRVIQPAKTESGILLPEKS-SKLNSGKVIAVGPGSRDKDGKLIPVSVKEGDT 65
Query: 126 VIYSKYAGTEVEFNGSPHLILKEDDIVGVLETD 158
V+ +Y GT+V+ + + + +++D++G L D
Sbjct: 66 VLLPEYGGTQVKLGENEYHLFRDEDVLGTLHED 98
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 160 IKDLKPCNDRVFIKVAEAEEKTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSI 219
+K L P +R+ ++ KT G+LL E S + S G VIAVGPG D++G P+S+
Sbjct: 2 MKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNS-GKVIAVGPGSRDKDGKLIPVSV 60
Query: 220 TPGNTVLYSKYAGNDFKGSDGTNYIALRASDVMAVLS 256
G+TVL +Y G K + Y R DV+ L
Sbjct: 61 KEGDTVLLPEYGGTQVKLGE-NEYHLFRDEDVLGTLH 96
>AT1G23100.1 | Symbols: | 10 kDa chaperonin, putative |
chr1:8195867-8196336 FORWARD
Length = 97
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 161 KDLKPCNDRVFIKVAEAEEKTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIT 220
K L P +RV ++ KT G+LL E S + S G VIAVGPG D GN P+S+
Sbjct: 3 KRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNS-GRVIAVGPGARDRAGNLIPVSVK 61
Query: 221 PGNTVLYSKYAGNDFKGSDGTNYIALRASDVMAVLS 256
G+ VL ++ G K + ++ R D+MA L
Sbjct: 62 EGDNVLLPEFGGTQVKLGE-KEFLLYRDEDIMATLH 96
>AT3G60210.1 | Symbols: | chloroplast chaperonin 10, putative |
chr3:22251443-22252709 REVERSE
Length = 138
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 20/122 (16%)
Query: 41 GLSQRSFRGLVVKAATVVAPKYTSIK--PLGDRVLVKIKVAEEKTEGGILLPTTAQ--SK 96
G+ + SFR V+ K+ K P DRVLV+++V EK+ GG+LLP +A +
Sbjct: 31 GIRRNSFR------INAVSTKWEPAKVVPQADRVLVRLEVLPEKSSGGVLLPKSAVKFER 84
Query: 97 PQGGEVVAVGEGKTIGKTKLDISVKTGAQVIYSKYAGTEVEF--NGSPHLILKEDDIVGV 154
GEVV+V G +G+ V+ G +V++S + EV+F + H KE D++ +
Sbjct: 85 YLTGEVVSV--GSEVGE------VEPGKKVLFSDMSAYEVDFGTEDAKHCFCKESDLLAI 136
Query: 155 LE 156
++
Sbjct: 137 VQ 138