Jatropha Genome Database
- JcCA0136101.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0136101.20 - phase: 2 /partial
(440 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11590.1 | Symbols: | unknown protein | chr3:3660628-3663537... 404 e-113
AT1G50660.1 | Symbols: | unknown protein | chr1:18771386-187743... 171 8e-43
AT3G20350.1 | Symbols: | unknown protein | chr3:7096602-7099372... 160 2e-39
AT5G41620.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 132 6e-31
AT5G22310.1 | Symbols: | unknown protein | chr5:7383742-7385345... 130 2e-30
AT1G64180.1 | Symbols: | intracellular protein transport protei... 105 6e-23
AT2G46250.1 | Symbols: | myosin heavy chain-related | chr2:1899... 87 2e-17
AT1G11690.1 | Symbols: | unknown protein | chr1:3941469-3942212... 64 2e-10
AT1G64690.1 | Symbols: | unknown protein | chr1:24038069-240388... 49 6e-06
>AT3G11590.1 | Symbols: | unknown protein | chr3:3660628-3663537
FORWARD
Length = 622
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/447 (56%), Positives = 298/447 (66%), Gaps = 68/447 (15%)
Query: 4 KNYLKLINRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFA 63
K LK+INR+WG +DRPSSSMSL+SALH+ELERARLQVN LI E + + N+++YLMK FA
Sbjct: 234 KELLKIINRMWGQDDRPSSSMSLVSALHSELERARLQVNQLIHEHKPENNDISYLMKRFA 293
Query: 64 EEKAAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKEL 123
EEKA WK+ EQ+VV AAIES+AGELEVE+KLRRR ESLNKKLGKELAETKS+L+KAVKE+
Sbjct: 294 EEKAVWKSNEQEVVEAAIESVAGELEVERKLRRRFESLNKKLGKELAETKSALMKAVKEI 353
Query: 124 ENEKRARVVMEQVCDELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERV 183
ENEKRARV++E+VCDELARDI EDKAEVEELKRES K+ EVEKEREMLQLAD LREERV
Sbjct: 354 ENEKRARVMVEKVCDELARDISEDKAEVEELKRESFKVKEEVEKEREMLQLADALREERV 413
Query: 184 QMKLSEAKYQLEEKNAAVDKLRSQLEAFLGTKRSKEKGR--SSYHMNDEDIVAYLNKSRP 241
QMKLSEAK+QLEEKNAAVDKLR+QL+ +L KR KEK R +++E+ YLN
Sbjct: 414 QMKLSEAKHQLEEKNAAVDKLRNQLQTYLKAKRCKEKTREPPQTQLHNEEAGDYLN---- 469
Query: 242 VAHQNEVNXXXXXXXXXXXXXXXXSGESDLHSIELNMDNNNKSYKWTYPSGTPRDLRKAA 301
H SGESDLHSIELN+D NKSYKW Y
Sbjct: 470 --HHISFGSYNIEDGEVENGNEEGSGESDLHSIELNID--NKSYKWPY------------ 513
Query: 302 IDEEETKGRKSTSSKVPRRSTSLQRSISDGVEWSAQNERLSVTGD-GIDWGGLSELERHL 360
EE +GRKST PR+S SLQRSISD V+W Q+E+L +GD G+DWG ++E
Sbjct: 514 --GEENRGRKST----PRKSLSLQRSISDCVDWVVQSEKLQKSGDGGLDWGRSIDVE--- 564
Query: 361 QGKGYGDEMLGHQSVKGLR--DYLLSGSRVDSARGYASPTRQVGQRPSRDSNNAIQDRPP 418
KGY DE ++ K ++LSGSR+ + RG
Sbjct: 565 -PKGYIDETQAYKPNKASSKDHHILSGSRLSNFRG------------------------- 598
Query: 419 TAPGNASKSRL-----GEGVIGRKSKW 440
G+ SKSRL GE RKS+W
Sbjct: 599 ---GSVSKSRLSDASKGENQNARKSRW 622
>AT1G50660.1 | Symbols: | unknown protein | chr1:18771386-18774385
FORWARD
Length = 725
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 149/206 (72%), Gaps = 3/206 (1%)
Query: 10 INRVWGNE---DRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEK 66
+++++ N D+ +++SL+S+L AELE A ++ L E+RS + +L ++ +EE+
Sbjct: 219 VHQIYSNMKRIDQQVNAVSLVSSLEAELEEAHARIEDLESEKRSHKKKLEQFLRKVSEER 278
Query: 67 AAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENE 126
AAW+++E + V A I+ + ++ EKK R+RLE +N KL ELA++K ++ + +++ E E
Sbjct: 279 AAWRSREHEKVRAIIDDMKTDMNREKKTRQRLEIVNHKLVNELADSKLAVKRYMQDYEKE 338
Query: 127 KRARVVMEQVCDELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERVQMK 186
++AR ++E+VCDELA++IGEDKAE+E LKRES+ L EV+ ER MLQ+A+V REERVQMK
Sbjct: 339 RKARELIEEVCDELAKEIGEDKAEIEALKRESMSLREEVDDERRMLQMAEVWREERVQMK 398
Query: 187 LSEAKYQLEEKNAAVDKLRSQLEAFL 212
L +AK LEE+ + ++KL LE+FL
Sbjct: 399 LIDAKVALEERYSQMNKLVGDLESFL 424
>AT3G20350.1 | Symbols: | unknown protein | chr3:7096602-7099372
FORWARD
Length = 673
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 142/207 (68%), Gaps = 2/207 (0%)
Query: 11 NRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEKAAWK 70
N W N+ + +SL S++ +L+ AR + L E+RS + +L +K +EE+AAW+
Sbjct: 202 NVKWNNQQ--VNDVSLASSIELKLQEARACIKDLESEKRSQKKKLEQFLKKVSEERAAWR 259
Query: 71 NKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENEKRAR 130
++E + V A I+ + ++ EKK R+RLE +N KL ELA++K ++ + + + + E++AR
Sbjct: 260 SREHEKVRAIIDDMKADMNQEKKTRQRLEIVNSKLVNELADSKLAVKRYMHDYQQERKAR 319
Query: 131 VVMEQVCDELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERVQMKLSEA 190
++E+VCDELA++I EDKAE+E LK ES+ L EV+ ER MLQ+A+V REERVQMKL +A
Sbjct: 320 ELIEEVCDELAKEIEEDKAEIEALKSESMNLREEVDDERRMLQMAEVWREERVQMKLIDA 379
Query: 191 KYQLEEKNAAVDKLRSQLEAFLGTKRS 217
K LEEK + ++KL +EAFL ++ +
Sbjct: 380 KVTLEEKYSQMNKLVGDMEAFLSSRNT 406
>AT5G41620.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane; EXPRESSED IN: 9 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: intracellular
protein transport protein USO1-related
(TAIR:AT1G64180.1); Has 2568 Blast hits to 2157 proteins
in 267 species: Archae - 27; Bacteria - 258; Metazoa -
955; Fungi - 181; Plants - 134; Viruses - 0; Other
Eukaryotes - 1013 (source: NCBI BLink). |
chr5:16646330-16648776 FORWARD
Length = 623
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 141/214 (65%), Gaps = 4/214 (1%)
Query: 7 LKLINRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEK 66
LK++NR+W E++ S++SLI AL E+ +R+++ L++ Q++D++EL+ ++K AEEK
Sbjct: 200 LKVLNRIWSLEEQHVSNISLIKALKTEVAHSRVRIKELLRYQQADRHELDSVVKQLAEEK 259
Query: 67 AAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENE 126
KNKE + +++A++S+ LE E+KLR+R ESL++K+ +EL+E KSSL VKELE
Sbjct: 260 LLSKNKEVERMSSAVQSVRKALEDERKLRKRSESLHRKMARELSEVKSSLSNCVKELERG 319
Query: 127 KRARVVMEQVCDELARDIGEDKAEVEELKRESV--KLCAEVEKEREMLQLADVLREERVQ 184
++ +ME +CDE A+ I + E+ LK++++ ++ +L +A+ +ER+Q
Sbjct: 320 SKSNKMMELLCDEFAKGIKSYEEEIHGLKKKNLDKDWAGRGGGDQLVLHIAESWLDERMQ 379
Query: 185 MKLSEAKYQLEEKNAAV-DKLRSQLEAFLGTKRS 217
M+L E L KN +V DKL ++E FL KR+
Sbjct: 380 MRL-EGGDTLNGKNRSVLDKLEVEIETFLQEKRN 412
>AT5G22310.1 | Symbols: | unknown protein | chr5:7383742-7385345
REVERSE
Length = 481
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 151/287 (52%), Gaps = 68/287 (23%)
Query: 4 KNYLKLINRVWG-NEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCF 62
K +K++ R+ +D ++S LISAL EL+RAR + HL+ E ++ E L++
Sbjct: 190 KELVKVLKRIGELGDDHKTASNRLISALLCELDRARSSLKHLMSELDEEEEEKRRLIESL 249
Query: 63 AEEKAAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKE 122
EE VE+KLRRR E +N++LG+EL E K + K +E
Sbjct: 250 QEEAM----------------------VERKLRRRTEKMNRRLGRELTEAKETERKMKEE 287
Query: 123 LENEKRARVVMEQVCDELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREER 182
++ EKRA+ V+E+VCDEL + IG+DK E+EKEREM+ +ADVLREER
Sbjct: 288 MKREKRAKDVLEEVCDELTKGIGDDK--------------KEMEKEREMMHIADVLREER 333
Query: 183 VQMKLSEAKYQLEEKNAAVDKLRSQLEAFLGTKRSKEKGRSSYHMNDEDIVAYLNKSRPV 242
VQMKL+EAK++ E+K AAV++L+ +L L E+G+ S + I+ ++ S
Sbjct: 334 VQMKLTEAKFEFEDKYAAVERLKKELRRVLDG----EEGKGSSEIR--RILEVIDGS--- 384
Query: 243 AHQNEVNXXXXXXXXXXXXXXXXSGESDLHSIELNMDNNNKSYKWTY 289
ESDL SIELNM++ + KW Y
Sbjct: 385 -------------------GSDDDEESDLKSIELNMESGS---KWGY 409
>AT1G64180.1 | Symbols: | intracellular protein transport protein
USO1-related | chr1:23821640-23824193 FORWARD
Length = 593
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 128/209 (61%), Gaps = 15/209 (7%)
Query: 7 LKLINRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEK 66
LK++NR+W E++ S+++SLI +L EL +R ++ L++ +++D+ +++ +K AEEK
Sbjct: 192 LKVLNRIWILEEQHSANISLIKSLKTELAHSRARIKDLLRCKQADKRDMDDFVKQLAEEK 251
Query: 67 AAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENE 126
+ KE +++A++S LE E+KLR+R ESL +KL +EL+E KS+L VKE+E
Sbjct: 252 LSKGTKEHDRLSSAVQS----LEDERKLRKRSESLYRKLAQELSEVKSTLSNCVKEMERG 307
Query: 127 KRARVVMEQVCDELARDIGEDKAEVEELKRESVK-LCAEVEKEREMLQLADVLREERVQM 185
++ ++E++CDE A+ I + E+ LK++ K E++ +L +A+ +ER+Q
Sbjct: 308 TESKKILERLCDEFAKGIKSYEREIHGLKQKLDKNWKGWDEQDHMILCIAESWLDERIQ- 366
Query: 186 KLSEAKYQLEEKNAAVDKLRSQLEAFLGT 214
+A++KL ++E FL T
Sbjct: 367 ---------SGNGSALEKLEFEIETFLKT 386
>AT2G46250.1 | Symbols: | myosin heavy chain-related |
chr2:18991386-18993201 FORWARD
Length = 468
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 108/183 (59%), Gaps = 19/183 (10%)
Query: 7 LKLINRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEK 66
LK++NR+W E++ +++MSL+ AL EL+ R ++ + Q ++ L
Sbjct: 166 LKVLNRIWSLEEQNTANMSLVRALKMELDECRAEIKEVQQRKKLSDRPLR---------- 215
Query: 67 AAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENE 126
K KE++ V SI EL+ E+K+R+ E+L++KL +EL E K L KA+K+LE E
Sbjct: 216 ---KKKEEEEVKDVFRSIKRELDDERKVRKESETLHRKLTRELCEAKHCLSKALKDLEKE 272
Query: 127 KRARVVMEQVCDELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERVQMK 186
+ RVV+E +CDE A+ + + + +V + ++S ++ ++Q+A+V ++R+QMK
Sbjct: 273 TQERVVVENLCDEFAKAVKDYEDKVRRIGKKSPV------SDKVIVQIAEVWSDQRLQMK 326
Query: 187 LSE 189
L E
Sbjct: 327 LEE 329
>AT1G11690.1 | Symbols: | unknown protein | chr1:3941469-3942212
FORWARD
Length = 247
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 106/193 (54%), Gaps = 21/193 (10%)
Query: 24 MSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEKAAWKNKEQKVVAAAIES 83
+L+ L EL +A+ ++ L E+ + + L++ +N++++ ++
Sbjct: 32 FNLVPCLQTELWKAQTRIKELEAEKFKSEETIRCLIR-------NQRNEKEETTNPFVDY 84
Query: 84 IAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENEKRARVVMEQVCDELARD 143
+ +L E++ ++R+++ N +L K++ + +SS+ + +R R ME+VC+EL
Sbjct: 85 LKEKLSKEREEKKRVKAENSRLKKKILDMESSVNRL-------RRERDTMEKVCEELV-- 135
Query: 144 IGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERVQMKLSEAKYQLEEKNAAVDK 203
++ELK + ++ E E+ER+MLQ+A++ REERV++K +AK L+EK ++
Sbjct: 136 -----TRIDELKVNTRRVWDETEEERQMLQMAEMWREERVRVKFMDAKLALQEKYEEMNL 190
Query: 204 LRSQLEAFLGTKR 216
+LE L T R
Sbjct: 191 FVVELEKCLETAR 203
>AT1G64690.1 | Symbols: | unknown protein | chr1:24038069-24038890
FORWARD
Length = 273
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 69/111 (62%), Gaps = 21/111 (18%)
Query: 81 IESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENEKRARVVMEQVCDEL 140
I+ + EL+ E+K RRR E + KKL K++ E + + + +E++N++ L
Sbjct: 84 IKELKAELDYERKARRRAELMIKKLAKDVEEERMA--REAEEMQNKR------------L 129
Query: 141 ARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERVQMKLSEAK 191
+++ +K+E+ +KR+ +E+ER+M +LA+VLREERVQMKL +A+
Sbjct: 130 FKELSSEKSEMVRMKRD-------LEEERQMHRLAEVLREERVQMKLMDAR 173