Jatropha Genome Database

JcCA0135781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0135781.10 - phase: 0 /partial
         (261 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G03667.1 | Symbols:  | asparagine synthase (glutamine-hydroly...   282   1e-76

>AT2G03667.1 | Symbols:  | asparagine synthase
           (glutamine-hydrolyzing) | chr2:1114179-1117281 FORWARD
          Length = 610

 Score =  282 bits (722), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 160/262 (61%), Positives = 191/262 (72%), Gaps = 19/262 (7%)

Query: 1   DSSKTLWFGRDAFGRRSLLVHWPTVKDPQFMLSSVSPFSAVDQSSGADLGVEDCTEPNFW 60
           +SS+TLWFG+D FGRRSLLVH PTV+DP+F+LSSVSP S+V Q    + G    +   +W
Sbjct: 168 ESSRTLWFGKDPFGRRSLLVHSPTVEDPRFLLSSVSPASSVSQGLDTENG---NSLHRYW 224

Query: 61  EELSCGIYSLSMAASKLHGCTFGEVKRHEWANTALINLIKWERVSVEPKPEELSFSC--G 118
           EEL CG+YS+S   S+L  C  GEV +HEW NT    LI+WER  V P+PE+LS S   G
Sbjct: 225 EELPCGVYSISFGVSEL--CIHGEVTKHEWRNTIWKELIEWERKLVVPRPEDLSTSSLSG 282

Query: 119 LDQ-----TSFSLPARNVLSALKKSVMLRTSLHTIFKAGTSDGGQEELVPVAVLFSGGLD 173
           + +     TS    A+ VL  LK+SV  RTSLH+I++      G +E VPVAVLFSGGLD
Sbjct: 283 VQEDKSVSTSLGF-AQTVLVVLKESVRRRTSLHSIYQ------GDKEAVPVAVLFSGGLD 335

Query: 174 SMILAALLDQCLDPSYGIDLLNVSFDGQFAPDRISAKAGVEELSRIAPLRRWKLVEIDAD 233
           SMILAALL QCLDP Y +DLLNVSFDG  APDRISAKAG++EL +IAP RRWKLVEIDAD
Sbjct: 336 SMILAALLHQCLDPKYEVDLLNVSFDGPNAPDRISAKAGIKELKKIAPFRRWKLVEIDAD 395

Query: 234 LSKLKLEMKHVMALINPANTYM 255
           LSKL  E K VM+LINPA+TYM
Sbjct: 396 LSKLGFETKRVMSLINPADTYM 417