Jatropha Genome Database

JcCA0135211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0135211.10 + phase: 2 /partial
         (61 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26930.1 | Symbols: ATCDPMEK, PDE277, ISPE | ATCDPMEK (4-(CYT...    96   6e-21

>AT2G26930.1 | Symbols: ATCDPMEK, PDE277, ISPE | ATCDPMEK
           (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL
           KINASE); 4-(cytidine
           5'-diphospho)-2-C-methyl-D-erythritol kinase |
           chr2:11491829-11494229 REVERSE
          Length = 383

 Score = 95.5 bits (236), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 50/55 (90%)

Query: 1   GSTIVGIGSPDPPQFIYDDEDYKDVFISEANFLTREPNQWYKEPASTAACDATSE 55
           GSTI+GIGSPDPPQFIYDDE+YK+VF+SEANF+TRE N+WYKEPAS  A  +++E
Sbjct: 323 GSTIIGIGSPDPPQFIYDDEEYKNVFLSEANFMTREANEWYKEPASANATTSSAE 377