Jatropha Genome Database
- JcCA0132071.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0132071.10 + phase: 0
(379 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32900.1 | Symbols: | starch synthase, putative | chr1:11920... 538 e-153
AT3G01180.1 | Symbols: AtSS2 | AtSS2 (starch synthase 2); transf... 237 1e-62
AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | SSI1 (SUPPRESSOR OF SA... 220 1e-57
AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | ATSS4; transferase, tr... 107 2e-23
AT1G11720.1 | Symbols: ATSS3 | ATSS3 (starch synthase 3); starch... 85 1e-16
>AT1G32900.1 | Symbols: | starch synthase, putative |
chr1:11920582-11923506 REVERSE
Length = 610
Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust.
Identities = 245/322 (76%), Positives = 285/322 (88%)
Query: 6 ANGHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPMFLEK 65
A GHRVMTI PRYDQYKD+WDT VV+QI+VG K+E VRFFHCYKRGVDRVFVDHP+FL K
Sbjct: 115 ARGHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAK 174
Query: 66 VWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFIAN 125
V GKTGSK+YGP G DY +NQLRFSL CQAA+EAP++L+LNS KYFSGPYGEDVVF+AN
Sbjct: 175 VVGKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVAN 234
Query: 126 DWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFDFF 185
DWHTALLPCYLK+ Y+S+G+Y NAKVVFCIHNIAYQGRFAF D++LLNLP FK+SFDF
Sbjct: 235 DWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFM 294
Query: 186 DGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTGISGIVN 245
DGYEKPVKGRKINWMKA ILE+ R++TVSP+YA+EL+SG+++GVEL LRM +SGI+N
Sbjct: 295 DGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIIN 354
Query: 246 GMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVIGFIGRLEEQK 305
GMDVQEWNPSTDKYI++KYD TV +AKPL+KEALQA VGLP+DR++PVIGFIGRLEEQK
Sbjct: 355 GMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQK 414
Query: 306 GSDILAAAIPFLIQENVQIIIL 327
GSDIL AI + NVQ++IL
Sbjct: 415 GSDILVEAISKFMGLNVQMVIL 436
>AT3G01180.1 | Symbols: AtSS2 | AtSS2 (starch synthase 2);
transferase, transferring glycosyl groups |
chr3:62456-65678 REVERSE
Length = 792
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 191/330 (57%), Gaps = 32/330 (9%)
Query: 8 GHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPMFLEKVW 67
GHRVM + PRY +Y ++ D V + +V G+ V +FH + GVD VF+D P F
Sbjct: 334 GHRVMVVVPRYAEYAEAKDLGVRKRYKVAGQDMEVMYFHAFIDGVDFVFIDSPEFRH--- 390
Query: 68 GKTGSKLYGPQAGTDYENNQL----RFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFI 123
+ +YG N+L R LFC+AA+E P + Y G ++ FI
Sbjct: 391 --LSNNIYG--------GNRLDILKRMVLFCKAAVEVPWYVPCGGVCYGDG----NLAFI 436
Query: 124 ANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFD 183
ANDWHTALLP YLKA+Y+ G+ + + V IHNIA+QGR DF+ ++LP + +SF
Sbjct: 437 ANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNIAHQGRGPVDDFSYVDLPSHYLDSFK 496
Query: 184 FFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTG--IS 241
+D PV G N AG+ +DR++TVS Y+ E V +E G L NI+
Sbjct: 497 LYD----PVGGEHFNIFAAGLKAADRVLTVSHGYSWE-VKTLEGGWGLHNIINENDWKFR 551
Query: 242 GIVNGMDVQEWNPSTDKYIN----VKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVIGF 297
GIVNG+D QEWNP D Y++ Y + KP K ALQ E+GLP+ ++P+IGF
Sbjct: 552 GIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLHIGKPQCKAALQKELGLPVRPDVPLIGF 611
Query: 298 IGRLEEQKGSDILAAAIPFLIQENVQIIIL 327
IGRL+ QKG D++A A+P+++ ++VQ+++L
Sbjct: 612 IGRLDHQKGVDLIAEAVPWMMSQDVQLVML 641
>AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | SSI1 (SUPPRESSOR OF
SALICYLIC ACID INSENSITIVITY 1); starch synthase/
transferase, transferring glycosyl groups |
chr5:8266934-8270860 FORWARD
Length = 652
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 194/341 (56%), Gaps = 27/341 (7%)
Query: 2 LLVQANGHRVMTISPRY-------DQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDR 54
+ + GHRVM ISPRY Y + D + + + G + V F+H Y+ GVD
Sbjct: 169 IALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIRVTVNCFGGSQEVSFYHEYRDGVDW 228
Query: 55 VFVDHPMFLEKVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSG 114
VFVDH K + + G+ YG G + +NQ RF+L C AA EAP +L L F+
Sbjct: 229 VFVDH-----KSYHRPGNP-YGDSKGA-FGDNQFRFTLLCHAACEAPLVLPLGG---FT- 277
Query: 115 PYGEDVVFIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNL 174
YGE +F+ NDWH L+P L A Y+ G+Y++A+ + IHN+A+QG + + L L
Sbjct: 278 -YGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGL 336
Query: 175 PERFKNS----FDFFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVE 230
P + + F + G +N +K I+ SDRI+TVS YA E+ + +E G
Sbjct: 337 PSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITT-VEGGYG 395
Query: 231 LDNIL--RMTGISGIVNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPI 288
L ++L R + I+GI NG++V EWNPSTD++I Y + V E K K ALQ E+GLPI
Sbjct: 396 LQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSE-KIKCKMALQKELGLPI 454
Query: 289 DRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQIIILVS 329
P+IGFIGRL+ QKG D++ A P L+ +++Q ++L S
Sbjct: 455 RPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGS 495
>AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | ATSS4; transferase,
transferring glycosyl groups | chr4:10082221-10087044
FORWARD
Length = 1040
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 48/341 (14%)
Query: 4 VQANGHRVMTISPRYD--QY---KDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVD 58
+Q GH V I P+YD QY +D + V++ GKL + + G+ F++
Sbjct: 571 LQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVESYFDGKLYKNKIWIGTVEGLPVHFIE 630
Query: 59 HPMFLEKVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGE 118
P K + + + YG Q ++ RFS F +AA+E L L SGK
Sbjct: 631 -PQHPSKFFWR--GQFYGEQ------DDFRRFSYFSRAALE----LLLQSGK------KP 671
Query: 119 DVVFIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFS-------DFAL 171
D++ +DW TA + Y KG+ +A++ F HN YQG + S D
Sbjct: 672 DIIH-CHDWQTAFVAPLYWDLYAPKGL-DSARICFTCHNFEYQGTASASELGSCGLDVNQ 729
Query: 172 LNLPERFKNSFDFFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVEL 231
LN P+R ++ G ++N +K I+ S+ + TVSP YA+E V E G L
Sbjct: 730 LNRPDRMQDH----------SSGDRVNPVKGAIIFSNIVTTVSPTYAQE-VRTAEGGKGL 778
Query: 232 DNILRMTGIS--GIVNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGL-PI 288
+ L GI+NG+D WNP+TD ++ +++ A ++ K K AL+ ++GL
Sbjct: 779 HSTLNFHSKKFIGILNGIDTDSWNPATDPFLKAQFN-AKDLQGKEENKHALRKQLGLSSA 837
Query: 289 DRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQIIILVS 329
+ P++G I RL QKG ++ AI ++ Q ++L S
Sbjct: 838 ESRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGS 878
>AT1G11720.1 | Symbols: ATSS3 | ATSS3 (starch synthase 3); starch
synthase/ transferase, transferring glycosyl groups |
chr1:3952511-3956840 FORWARD
Length = 1025
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 100/241 (41%), Gaps = 54/241 (22%)
Query: 89 RFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFIANDWHTALLPCYLKAFYKSKGMYRN 148
RF FC AA+E G + D++ +DW +A + K Y G+ +
Sbjct: 680 RFGFFCHAALEF----------LLQGGFHPDILH-CHDWSSAPVSWLFKDHYTQYGLIK- 727
Query: 149 AKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFDFFDGYEKPVKGRKINWMKAGILESD 208
++VF IHN+ + N + + +D
Sbjct: 728 TRIVFTIHNLEFGA-----------------------------------NAIGKAMTFAD 752
Query: 209 RIVTVSPHYAEELVSGIEKGVELDNILRMTGISGIVNGMDVQEWNPSTDKYINVKYDSAT 268
+ TVSP YA+E+ L GI+NG+D W+P D +I V Y S
Sbjct: 753 KATTVSPTYAKEVAGNSVISAHL------YKFHGIINGIDPDIWDPYNDNFIPVPYTSEN 806
Query: 269 VMEAKPLLKEALQAEVGLPIDRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQIIILV 328
V+E K KE LQ +GL + PV+G I RL QKG ++ AI ++ N Q+++L
Sbjct: 807 VVEGKRAAKEELQNRLGLK-SADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLG 865
Query: 329 S 329
S
Sbjct: 866 S 866