Jatropha Genome Database

JcCA0131921.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0131921.10 + phase: 0 /pseudo
         (339 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05240.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   137   1e-32
AT2G40630.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   107   1e-23

>AT5G05240.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; CONTAINS InterPro DOMAIN/s:
           Uncharacterised conserved protein UCP030365
           (InterPro:IPR016953); BEST Arabidopsis thaliana protein
           match is: unknown protein (TAIR:AT2G40630.1); Has 24
           Blast hits to 24 proteins in 7 species: Archae - 0;
           Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 22;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr5:1554023-1556230 REVERSE
          Length = 530

 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/158 (48%), Positives = 100/158 (63%), Gaps = 7/158 (4%)

Query: 162 NAEDVTSSMNQELLS--TSKNHDQMKSRGDASECGSTTGPAEGKDPLKVWKEMKQNXXXX 219
           NA+ V+S +N +L S  +S+   +  S    SECGS+ G    +DP+KVW EMKQN    
Sbjct: 113 NADAVSSCLNDDLTSVCSSRISQKTSSMDVYSECGSSNGSVAKRDPMKVWTEMKQNGYLS 172

Query: 220 XXX--XXXXXXXXXXXXXHGGIPMPKQRGRKSK--NDV-LKKKMELAKKEQVDRFTKIAA 274
                             HGGIP PK+RGRK+K  ND  + KK ++ +KE+VDRF ++AA
Sbjct: 173 NPNGGISTTSSSCLISSSHGGIPAPKKRGRKTKINNDAAVAKKRKIERKEEVDRFARLAA 232

Query: 275 PSGLLNGLNPGIINHVRNRKQVHSIIEALVRSEKQENN 312
           PSGLLN LNPGIINHVRN+KQV SIIE +V+SE+   N
Sbjct: 233 PSGLLNELNPGIINHVRNKKQVLSIIENIVKSERDAGN 270


>AT2G40630.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast; EXPRESSED IN: 23 plant structures;
           EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
           DOMAIN/s: Uncharacterised conserved protein UCP030365
           (InterPro:IPR016953); BEST Arabidopsis thaliana protein
           match is: unknown protein (TAIR:AT5G05240.1); Has 101
           Blast hits to 95 proteins in 44 species: Archae - 0;
           Bacteria - 32; Metazoa - 24; Fungi - 6; Plants - 20;
           Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
           | chr2:16958442-16960942 FORWARD
          Length = 535

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 158/331 (47%), Gaps = 19/331 (5%)

Query: 3   SEGDLGLPGSDSKEIGEKRSSGELGEKQESAPKRIKMRDLHSVLRSEVHSEISTHHSKEE 62
           S G +  P S+S   GEKR+   L EK E   KR+K+ DL S  ++   S + +H +   
Sbjct: 8   SSGVVSEPASNSVISGEKRNGNGLDEKDELGSKRVKVPDLASDAKT---SSLQSHGNSNS 64

Query: 63  EANDQLQFGEEMSQITSVPITLDPDASELGRTSR--TVLSVEVNPATRPLDLNSEAYVAD 120
                L   E++S+++ V +   PDA  + R  R   VLS ++ P++    + +  Y+  
Sbjct: 65  VQQPNLS-SEKLSKVSKVLVA--PDAEGIRRVVRENDVLSKDIKPSS---TVETRTYLPK 118

Query: 121 SSAGHGSPEGTEACN--KVSLLKQHN-REHDYKRVTSRGIGLDLNAEDVTSSMNQELLST 177
           + +   + +     N  K +LL+ H  +  D K    + I L    E   S ++Q   + 
Sbjct: 119 AKS-ISTDDNRRVVNSGKQALLENHTVKTDDSKCRVVKNISLLKPRETTESVVSQRGAAE 177

Query: 178 SKNHDQMKSRGDASE-CGSTTGPAEGKDPLKVWKEMKQNXXXXXXXXXXXXXXXXXXXXH 236
                 +  +    + C S  G     D ++ W+EMK+N                     
Sbjct: 178 PSVSVPVGDKVSPFQMCSSADGSLGESDSMRRWREMKRNGFLSGPLGGVAAPTSTVVTTP 237

Query: 237 GGIPMPKQRGRKSKN-DVLKKKMELAKKEQ--VDRFTKIAAPSGLLNGLNPGIINHVRNR 293
             +P PKQ+  K +  + LKKK ++ KKEQ  VDRF  + APSGLL  LNPGIINHVR +
Sbjct: 238 VEVPAPKQQKNKRRGGESLKKKNDVPKKEQQLVDRFANVTAPSGLLTELNPGIINHVRTK 297

Query: 294 KQVHSIIEALVRSEKQENNCTEAKQDSHLKN 324
           KQV SIIEAL+RS   +    E   D ++++
Sbjct: 298 KQVCSIIEALIRSSNDDATTRERHGDFNVRD 328