Jatropha Genome Database
- JcCA0130881.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0130881.10 - phase: 0
(335 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38430.1 | Symbols: ATROPGEF1, ROPGEF1 | ROPGEF1; Rho guanyl-... 336 1e-92
AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | ROPGEF7; Rho guanyl-... 281 3e-76
AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROPGEF5 (ROP GUANINE... 266 1e-71
AT3G55660.1 | Symbols: ATROPGEF6, ROPGEF6 | ROPGEF6; Rho guanyl-... 252 3e-67
AT4G00460.2 | Symbols: ATROPGEF3, ROPGEF3 | Rho guanyl-nucleotid... 241 5e-64
AT4G00460.1 | Symbols: ATROPGEF3, ROPGEF3 | Rho guanyl-nucleotid... 241 6e-64
AT1G01700.1 | Symbols: ATROPGEF2, ROPGEF2 | ROPGEF2; Rho guanyl-... 233 2e-61
AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | ROPGEF12 (R... 227 8e-60
AT1G52240.1 | Symbols: ATROPGEF11, ROPGEF11 | ROPGEF11 (RHO GUAN... 226 1e-59
AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | ROPGEF9; Rho guanyl-... 220 9e-58
AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | ROPGEF8; Rho guanyl-... 217 1e-56
AT2G45890.1 | Symbols: ATROPGEF4, ROPGEF4 | ROPGEF4 (RHO GUANYL-... 207 8e-54
AT5G19560.1 | Symbols: ATROPGEF10, ROPGEF10 | ROPGEF10 (ROP UANI... 202 2e-52
AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13 | ROPGEF13; Rho guan... 202 2e-52
AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | ROPGEF14; Rho guan... 199 2e-51
>AT4G38430.1 | Symbols: ATROPGEF1, ROPGEF1 | ROPGEF1; Rho
guanyl-nucleotide exchange factor/ protein binding |
chr4:17986643-17988659 FORWARD
Length = 548
Score = 336 bits (861), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 224/335 (66%), Gaps = 19/335 (5%)
Query: 1 METVSSEEELDQLSERCEFDXXXXXXXXXXXXXXXXXXCPHYDHQGASTSFTSSP--LTG 58
M ++SSEE+ + SERC C +D +GAS+S SSP + G
Sbjct: 1 MGSLSSEEDDEVSSERC--GSYSPSADISESESSSSFSCHRFDGEGASSSIPSSPRVVAG 58
Query: 59 PQFHDGFNSPPPLPIMLPVVSGRHVTIPTKGAVKPDTGLSEVEMMKERFAKLLLGEDMSG 118
F+ P P+MLPV+ G+ V K +PD LSE+EMMKERFAKLLLGEDMSG
Sbjct: 59 RGFYF------PAPVMLPVIGGKDVVWDDK---QPDNDLSEIEMMKERFAKLLLGEDMSG 109
Query: 119 RGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSMWHREMEWLLCVSNSIVELVPS 178
G GVCTALAISNAITNLSA+VFGE W+LEPLA KK+MW RE+EWLLCVS+SIVEL+PS
Sbjct: 110 GGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRRELEWLLCVSDSIVELIPS 169
Query: 179 MQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSILDGFCNSDFSYVDSKVMVAVGD 238
+Q FP G T+E+M RPRSDL+ NLPALKKLDAML+ +LD F +++F Y D +++ D
Sbjct: 170 IQQFPGGGTYEIMETRPRSDLYANLPALKKLDAMLIDMLDAFSDTEFWYTDRGIVLGDCD 229
Query: 239 ETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSEDTRKRLQQCRECTNQILKAAMAIN 298
+ + QE+K WLP PKVP NGLSE+ RK+LQQCR+ NQILKAA+AIN
Sbjct: 230 KD------SYNSPASVRQEDKWWLPCPKVPPNGLSEEARKKLQQCRDFANQILKAALAIN 283
Query: 299 NSVLSEMEIPNAYLESLPKVWNTPCGMKFYFCTTS 333
+ VL+EMEIP+ YLE+LPK G Y T+
Sbjct: 284 SGVLAEMEIPDPYLETLPKSGKECLGEIIYQYLTA 318
>AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | ROPGEF7; Rho
guanyl-nucleotide exchange factor | chr5:383493-385698
FORWARD
Length = 546
Score = 281 bits (720), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/248 (57%), Positives = 175/248 (70%), Gaps = 8/248 (3%)
Query: 88 KGAVKPDTGLSEVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKL 147
K ++ D+ +SEVEMMKERF+KLLLGEDMSG GNGVCTALAISNAITNL A++FG+ W+L
Sbjct: 59 KKKIRSDSRVSEVEMMKERFSKLLLGEDMSGSGNGVCTALAISNAITNLCATLFGQLWRL 118
Query: 148 EPLAQPKKSMWHREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALK 207
EPL KK MW REMEWLLCVS+ IVE+ P+ Q FP G E+M RPRSDL+VNLPAL+
Sbjct: 119 EPLPTEKKEMWRREMEWLLCVSDHIVEMTPTWQTFPDGTKLEIMTCRPRSDLYVNLPALR 178
Query: 208 KLDAMLLSILDGFCNSDFSYVDSKVMV--AVGDETKXXXXXXXXXXXXINQEEKCWLPFP 265
KLD MLL ILD F ++F YVD +M + D + QE+K WLP P
Sbjct: 179 KLDNMLLEILDSFEETEFWYVDQGIMAHESAADGSSSFRKSFQ------RQEDKWWLPVP 232
Query: 266 KVPRNGLSEDTRKRLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGM 325
+V GL E++RK+LQ R+CTNQILKAAMAIN+ L++MEIP +YLESLP+ + G
Sbjct: 233 RVSPGGLQENSRKQLQHKRDCTNQILKAAMAINSITLADMEIPESYLESLPRKGRSCLGD 292
Query: 326 KFYFCTTS 333
Y +S
Sbjct: 293 LIYRYISS 300
>AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROPGEF5 (ROP GUANINE
NUCLEOTIDE EXCHANGE FACTOR 5); Rho guanyl-nucleotide
exchange factor | chr5:1786028-1788363 FORWARD
Length = 611
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/236 (56%), Positives = 162/236 (68%), Gaps = 6/236 (2%)
Query: 98 SEVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSM 157
++VEMMKERFAKLLLGEDMSG G GVCTALAISNAITNL A++FG+ W+LEPL+ KK M
Sbjct: 101 ADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPLSSEKKEM 160
Query: 158 WHREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSIL 217
W REMEW+L VS+ IVEL PS Q +P G FEVM RPR DL +NLPAL+KLD MLL IL
Sbjct: 161 WRREMEWILSVSDHIVELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLDNMLLDIL 220
Query: 218 DGFCNSDFSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSEDTR 277
F ++F YVD ++ + D + QEEK WLP P++ NGL+E+ R
Sbjct: 221 ASFKKTEFWYVDQGIVASENDGSASFRRKIQ------RQEEKWWLPVPRLAPNGLTEEAR 274
Query: 278 KRLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFYFCTTS 333
L REC QILKAAMAIN+ L+EM++P +YLE+LPK + G Y TS
Sbjct: 275 TELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTS 330
>AT3G55660.1 | Symbols: ATROPGEF6, ROPGEF6 | ROPGEF6; Rho
guanyl-nucleotide exchange factor |
chr3:20649051-20651290 REVERSE
Length = 579
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/252 (53%), Positives = 166/252 (65%), Gaps = 14/252 (5%)
Query: 86 PTK----GAVKPDTGLSEVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVF 141
PTK G + T SE+E++KER AKLLLGEDMSG G GVC ALAISNAITNL A++
Sbjct: 90 PTKIDDFGFKRVGTETSEIELLKERMAKLLLGEDMSGSGEGVCPALAISNAITNLYAAIL 149
Query: 142 GEQWKLEPLAQPKKSMWHREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHV 201
G+QW+LEP+ KK MW RE+E LL VS+ IVELVPS Q+FP+G EVM RPRSDL
Sbjct: 150 GQQWRLEPIPSEKKLMWRREIEVLLSVSDHIVELVPSFQNFPNGNKIEVMNCRPRSDLFT 209
Query: 202 NLPALKKLDAMLLSILDGFCNSDFSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCW 261
LPAL+KLD ML+ ILD F ++F YVD ++ A + +K W
Sbjct: 210 CLPALRKLDNMLIEILDSFGETEFWYVDQGIVAAESARSNSFR----------EDGDKWW 259
Query: 262 LPFPKVPRNGLSEDTRKRLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNT 321
LP P+VP +GL+E TRK+L RE TNQILKA M+IN+ L+EME+P +YLE+LPK +
Sbjct: 260 LPLPRVPSDGLTEQTRKKLDHTREFTNQILKACMSINSIALAEMEVPQSYLEALPKNGRS 319
Query: 322 PCGMKFYFCTTS 333
G Y TS
Sbjct: 320 CLGDFLYRNITS 331
>AT4G00460.2 | Symbols: ATROPGEF3, ROPGEF3 | Rho guanyl-nucleotide
exchange factor | chr4:211146-213094 REVERSE
Length = 473
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 158/230 (68%), Gaps = 3/230 (1%)
Query: 99 EVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSMW 158
E+E MKERFAKLLLGEDMSG G GVCTA+ ISNAITNL A+VFG+ +LEPL K+++W
Sbjct: 104 ELETMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALW 163
Query: 159 HREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSILD 218
REM LL V + IVE +P Q+ +GAT EVM RPR+D+++NLPAL+KLD+ML+ LD
Sbjct: 164 KREMNCLLSVCDYIVEFIPRCQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALD 223
Query: 219 GFCNSDFSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSEDTRK 278
F N++F Y + ++ ++ +EEK WLP P VP GLS+ RK
Sbjct: 224 SFQNTEFWYAEEG---SLSMKSARSSTGSFRKVIVQRKEEKWWLPVPLVPSEGLSDKARK 280
Query: 279 RLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFY 328
+L+ RE TNQI KAAMAIN+S+LSEMEIP++Y+ +LPK + G Y
Sbjct: 281 QLKNKRESTNQIHKAAMAINSSILSEMEIPDSYMTTLPKCGKSSVGDSIY 330
>AT4G00460.1 | Symbols: ATROPGEF3, ROPGEF3 | Rho guanyl-nucleotide
exchange factor | chr4:211731-213094 REVERSE
Length = 337
Score = 241 bits (614), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 160/233 (68%), Gaps = 11/233 (4%)
Query: 99 EVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSMW 158
E+E MKERFAKLLLGEDMSG G GVCTA+ ISNAITNL A+VFG+ +LEPL K+++W
Sbjct: 104 ELETMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALW 163
Query: 159 HREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSILD 218
REM LL V + IVE +P Q+ +GAT EVM RPR+D+++NLPAL+KLD+ML+ LD
Sbjct: 164 KREMNCLLSVCDYIVEFIPRCQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALD 223
Query: 219 GFCNSDFSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSEDTRK 278
F N++F Y + ++ ++ +EEK WLP P VP GLS+ RK
Sbjct: 224 SFQNTEFWYAEEG---SLSMKSARSSTGSFRKVIVQRKEEKWWLPVPLVPSEGLSDKARK 280
Query: 279 RLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFYFCT 331
+L+ RE TNQI KAAMAIN+S+LSEMEIP++Y+ +LPKV F+F T
Sbjct: 281 QLKNKRESTNQIHKAAMAINSSILSEMEIPDSYMTTLPKV--------FFFVT 325
>AT1G01700.1 | Symbols: ATROPGEF2, ROPGEF2 | ROPGEF2; Rho
guanyl-nucleotide exchange factor/ protein binding |
chr1:259495-261474 REVERSE
Length = 485
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 155/235 (65%), Gaps = 3/235 (1%)
Query: 99 EVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSMW 158
E+E MKERF+KLLLGEDMSG G GVCTA+ ISNAITNL A+VFG+ +LEPL +K+ W
Sbjct: 116 ELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTW 175
Query: 159 HREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSILD 218
REM LL V + I E +P Q+ +GAT EVM RPR+D+++NLPAL+KLD+ML+ LD
Sbjct: 176 KREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALD 235
Query: 219 GFCNSDFSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSEDTRK 278
F ++F Y + ++ ++ +EEK WLP P VP GLSE RK
Sbjct: 236 SFQKTEFWYAEEG---SLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKARK 292
Query: 279 RLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFYFCTTS 333
+L+ RE TNQI KAAMAIN+S+L EM+IP++Y+ +LPK G Y TS
Sbjct: 293 QLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTS 347
>AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | ROPGEF12 (RHO
GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12); Rho
guanyl-nucleotide exchange factor |
chr1:30042172-30044092 REVERSE
Length = 515
Score = 227 bits (579), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 155/237 (65%), Gaps = 17/237 (7%)
Query: 97 LSEVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKS 156
L+++E MKERF+KLLLGED SG G GV +ALA+SNAITNL+ASVFGEQ +LEP+ +++
Sbjct: 90 LADMEQMKERFSKLLLGEDNSGGGKGVSSALALSNAITNLAASVFGEQRRLEPMPAERRA 149
Query: 157 MWHREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSI 216
W +E++WLL V++ +VE PS Q G E+M R R+DLH+N+PALKKLDAML+
Sbjct: 150 RWRKEIDWLLSVTDYVVEFAPSQQKNKDGTNMEIMTTRQRTDLHMNIPALKKLDAMLIDC 209
Query: 217 LDGFCN-SDFSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSED 275
L+ F + S+FSY+ G +EK W+P KVP +GLSE
Sbjct: 210 LENFKDQSEFSYISKDSPDLDGKRN----------------DEKWWIPTVKVPPDGLSEA 253
Query: 276 TRKRLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFYFCTT 332
+R+ LQ ++C NQ+LKAAMAIN VL EMEIP +Y++SLPK G + Y T
Sbjct: 254 SRRFLQYQKDCVNQVLKAAMAINAQVLFEMEIPESYIDSLPKNGRASLGDQMYKNIT 310
>AT1G52240.1 | Symbols: ATROPGEF11, ROPGEF11 | ROPGEF11 (RHO
GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho
guanyl-nucleotide exchange factor |
chr1:19455766-19459235 REVERSE
Length = 607
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/234 (53%), Positives = 152/234 (64%), Gaps = 17/234 (7%)
Query: 100 VEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSMWH 159
+E MKE+F+KLLLGEDMSG G GV +ALA+SNAITNL+AS FGEQ +LEP+A +K+ W
Sbjct: 169 MEQMKEKFSKLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRWR 228
Query: 160 REMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSILDG 219
RE+ WL+ V++ IVE P+ Q G + EVM R R+DL N+PALKKLDAMLL LD
Sbjct: 229 REIGWLISVADYIVEFAPTQQTNKDGTSMEVMSTRQRTDLLCNIPALKKLDAMLLDCLDK 288
Query: 220 FCNSD-FSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSEDTRK 278
F + D F YV + ET+ +EK WLP KVP NGLSE +R+
Sbjct: 289 FKDQDEFYYVKKDSPDSC--ETR--------------NDEKWWLPAVKVPPNGLSEISRR 332
Query: 279 RLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFYFCTT 332
LQ +EC NQ+LKAAMAIN VLSEMEIP +YLESLPK G Y T
Sbjct: 333 FLQSQKECVNQVLKAAMAINAQVLSEMEIPESYLESLPKNGRASLGDVIYRMIT 386
>AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | ROPGEF9; Rho
guanyl-nucleotide exchange factor | chr4:7680153-7682414
FORWARD
Length = 517
Score = 220 bits (561), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/244 (49%), Positives = 156/244 (63%), Gaps = 18/244 (7%)
Query: 92 KPDTGLSEVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLA 151
+ D SE EMMK+RF KLLLGEDMSG G GV +ALA+SNAITNL+AS+FGEQ KL+P+A
Sbjct: 67 RQDKQQSETEMMKDRFTKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMA 126
Query: 152 QPKKSMWHREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDA 211
+++ W +E++WLL V++ IVE VPS Q G E+MV R R DL +N+PAL+KLDA
Sbjct: 127 PDRRARWKKEIDWLLSVTDHIVEFVPSQQISKEGVCTEIMVTRQRGDLLMNIPALRKLDA 186
Query: 212 MLLSILDGF-CNSDFSYV--DSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVP 268
ML+ LD F +++F YV DS+ +E ++K WLP KVP
Sbjct: 187 MLIDTLDNFRGHNEFWYVSRDSEEGKQARNE---------------RTKDKWWLPPVKVP 231
Query: 269 RNGLSEDTRKRLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFY 328
NGLSE R+ L ++ +Q+ KAAMAIN VLSEM IP++Y+ESLPK G Y
Sbjct: 232 PNGLSESARRMLHFQKDSVSQVQKAAMAINAQVLSEMAIPDSYIESLPKNGRVSLGDSLY 291
Query: 329 FCTT 332
T
Sbjct: 292 KSIT 295
>AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | ROPGEF8; Rho
guanyl-nucleotide exchange factor | chr3:8980695-8982793
REVERSE
Length = 523
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 168/267 (62%), Gaps = 25/267 (9%)
Query: 70 PLPIMLPVVSGRHVTIPTKGAVKPDTGLSEVEMMKERFAKLLLGEDMSGRGNGVCTALAI 129
P+ LP++S +T P K + + +++EMMK+RFAKLLLGEDMSG G GV +ALA+
Sbjct: 61 PVESSLPMIS--PLTRPGK---RSERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALAL 115
Query: 130 SNAITNLSASVFGEQWKLEPLAQPKKSMWHREMEWLLCVSNSIVELVPSMQDFPSGATFE 189
SNAITNL+AS+FGEQ KL+P+ Q +++ W +E++WLL V++ IVE VPS Q G E
Sbjct: 116 SNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTE 175
Query: 190 VMVPRPRSDLHVNLPALKKLDAMLLSILDGF-CNSDFSYV--DSKV-MVAVGDETKXXXX 245
+MV R R DL +N+PAL+KLDAML+ LD F +++F YV DS+ A D T
Sbjct: 176 IMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSEEGQQARNDRTN---- 231
Query: 246 XXXXXXXXINQEEKCWLPFPKVPRNGLSEDTRKRLQQCRECTNQILKAAMAINNSVLSEM 305
+K WLP KVP GLSE +R+ L ++ Q+ KAAMAIN VLSEM
Sbjct: 232 ------------DKWWLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEM 279
Query: 306 EIPNAYLESLPKVWNTPCGMKFYFCTT 332
EIP +Y++SLPK G Y T
Sbjct: 280 EIPESYIDSLPKNGRASLGDSIYKSIT 306
>AT2G45890.1 | Symbols: ATROPGEF4, ROPGEF4 | ROPGEF4 (RHO
GUANYL-NUCLEOTIDE EXCHANGE FACTOR 4); Rho
guanyl-nucleotide exchange factor |
chr2:18883540-18885440 FORWARD
Length = 463
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 151/236 (63%), Gaps = 7/236 (2%)
Query: 98 SEVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSM 157
+E+EMM+ERFAKLLLGEDMSG G GVCTA+ +SN+ITNL A+VFG+ +L+PL+ KK +
Sbjct: 92 AELEMMRERFAKLLLGEDMSGSGKGVCTAVTVSNSITNLYATVFGQSLRLQPLSTEKKDL 151
Query: 158 WHREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSIL 217
W REM + + + IVE++P G E+ + RSD+ ++LPAL+KLD ML+ IL
Sbjct: 152 WKREMNCFMSICDYIVEVIPR----SLGTNVEITETKLRSDILMSLPALRKLDNMLMEIL 207
Query: 218 DGFCNSDFSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSEDTR 277
D F ++F YV+ + ++ ++EK WLP P VP GLSE+ R
Sbjct: 208 DSFTENEFWYVE-RGSSSMNSGGGGRDSGTFRKVVVQRKDEKWWLPVPCVPAEGLSEEER 266
Query: 278 KRLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFY--FCT 331
K L+ R+C +QI KAA+AIN+S L++M+IP++YL +LPK G Y CT
Sbjct: 267 KHLRHKRDCASQIHKAALAINDSTLNDMDIPDSYLTTLPKSGKASVGDVIYKQLCT 322
>AT5G19560.1 | Symbols: ATROPGEF10, ROPGEF10 | ROPGEF10 (ROP UANINE
NUCLEOTIDE EXCHANGE FACTOR 10); Rho guanyl-nucleotide
exchange factor | chr5:6603291-6606130 FORWARD
Length = 493
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 147/238 (61%), Gaps = 18/238 (7%)
Query: 98 SEVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSM 157
S++E+MKERFAKLLLGEDMSG G G +ALA+SNAIT L+ S+FGEQ KL+P+ K
Sbjct: 43 SDMEVMKERFAKLLLGEDMSGGGTGETSALALSNAITKLADSMFGEQMKLQPMYPETKEN 102
Query: 158 WHREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSIL 217
W +EM WLL V + IV+ VPS Q +G E+MV + R DL N+PAL+KLD++LL L
Sbjct: 103 WRKEMGWLLSVIDHIVQFVPSRQMGKNGQFTEIMVTKQRDDLLTNIPALRKLDSVLLETL 162
Query: 218 DGFCNS-DFSYV--DSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSE 274
D F + DF YV D + GD ++E WLP KVP +GLSE
Sbjct: 163 DNFKDQKDFWYVPRDMEDADHNGD---------------WRRDENWWLPVVKVPTDGLSE 207
Query: 275 DTRKRLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFYFCTT 332
++R+ LQ ++ Q+LKAA AIN VLSEM +P Y++SLPK T G Y T
Sbjct: 208 ESRRWLQNQKDSVAQVLKAATAINAHVLSEMHVPENYIDSLPKNGKTSLGDFLYKSIT 265
>AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13 | ROPGEF13; Rho
guanyl-nucleotide exchange factor | chr3:5466246-5468512
FORWARD
Length = 576
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 144/237 (60%), Gaps = 14/237 (5%)
Query: 97 LSEVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKS 156
++E+E MK++FAKLLLGEDMSG GV +ALA+SNAITNL+AS FGE +LE +++ KK
Sbjct: 126 VTELEQMKDKFAKLLLGEDMSGGSKGVSSALALSNAITNLAASAFGEIRRLEAISEDKKE 185
Query: 157 MWHREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSI 216
W RE+ WLL V++ IVE P+ Q G++ EVM + R+DL N+P+LKKLD MLL
Sbjct: 186 RWRREIGWLLSVTDHIVEFSPTHQTNEDGSSMEVMTTKQRTDLVSNIPSLKKLDEMLLDC 245
Query: 217 LDGFCNSD-FSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSED 275
LD F + D F YV ++K WLP KVP GLSE
Sbjct: 246 LDKFKDQDEFYYV-------------TPGSPESENSNSTRNDDKWWLPIVKVPPKGLSET 292
Query: 276 TRKRLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFYFCTT 332
++ L REC Q+L +AMAIN+ VL+EMEIP +Y++SLPK G Y T
Sbjct: 293 LKRFLLSQRECVCQVLNSAMAINSQVLTEMEIPESYIDSLPKKGRASLGDMIYRMIT 349
>AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | ROPGEF14; Rho
guanyl-nucleotide exchange factor |
chr1:11326474-11329767 REVERSE
Length = 576
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 146/230 (63%), Gaps = 13/230 (5%)
Query: 99 EVEMMKERFAKLLLGEDMSGRGNGVCTALAISNAITNLSASVFGEQWKLEPLAQPKKSMW 158
+VE MKE+F+KLLLGED++G GV ALA+SNA+T+L+ S+FGE WKLEPL + KK W
Sbjct: 136 DVEAMKEKFSKLLLGEDVTGGCKGVQVALALSNAVTHLATSIFGELWKLEPLCEEKKQKW 195
Query: 159 HREMEWLLCVSNSIVELVPSMQDFPSGATFEVMVPRPRSDLHVNLPALKKLDAMLLSILD 218
REM+WLL +N ++ELVPS Q+ +G + E+M P+ R+D+H+NLPAL+KLD+ML+ LD
Sbjct: 196 RREMDWLLSPTNYMIELVPSKQNDANGRSLEIMTPKARADIHMNLPALQKLDSMLIETLD 255
Query: 219 GFCNSDFSYVDSKVMVAVGDETKXXXXXXXXXXXXINQEEKCWLPFPKVPRNGLSEDTRK 278
N++F Y + +G + ++ ++ WLP P+VP+ GLS RK
Sbjct: 256 SMVNTEFWYSE------IGSRAE-------GKNKSTSESKRWWLPSPQVPKPGLSNSGRK 302
Query: 279 RLQQCRECTNQILKAAMAINNSVLSEMEIPNAYLESLPKVWNTPCGMKFY 328
+L + Q+ KA AIN ++L EM +P E++PK G + Y
Sbjct: 303 KLLDKGKVVYQVFKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELY 352