Jatropha Genome Database

JcCA0129501.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0129501.30 - phase: 1 /pseudo/partial
         (293 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47800.1 | Symbols:  | aldose 1-epimerase family protein | ch...   380   e-106
AT5G15140.1 | Symbols:  | aldose 1-epimerase family protein | ch...   301   4e-82
AT3G17940.1 | Symbols:  | aldose 1-epimerase family protein | ch...   273   6e-74
AT3G01260.1 | Symbols:  | aldose 1-epimerase/ carbohydrate bindi...   173   9e-44

>AT3G47800.1 | Symbols:  | aldose 1-epimerase family protein |
           chr3:17634971-17636998 FORWARD
          Length = 358

 Score =  380 bits (976), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 178/262 (67%), Positives = 217/262 (82%), Gaps = 1/262 (0%)

Query: 4   DIVLGFESIEEYKNDTTYFGSIVGRVANRIGKSQFTLNGTVYKLVPNNGKNSLHGGPKGF 63
           D+VLGF++++ YKNDTTYFG+IVGRVANRIG ++F LNG +YK  PN G+N+LHGG KGF
Sbjct: 66  DVVLGFDTVDGYKNDTTYFGAIVGRVANRIGGAKFKLNGHLYKTDPNEGRNTLHGGSKGF 125

Query: 64  SEVLWKVYSYNKDSHITFTYDSFDGEEGYPGDLSVSVTYFVIGTNKIAVKMVAKPLNKAT 123
           S+V+W V  Y   SHITFTYDSFDGEEG+PG+++V VTY +IG NK+ VKM AKPLNK T
Sbjct: 126 SDVIWSVQKYVPTSHITFTYDSFDGEEGFPGNVTVKVTYMLIGENKLGVKMEAKPLNKPT 185

Query: 124 PVNLALHTYFNLAGHNSGDILSHKIQLFAPEITPVDSELIPTGKITPVKGTPFDFLEPRE 183
           P+NLALHTY+NL  HNSG+ILSHKIQL A +ITPVD +LIPTG+IT + GTP+DFLEPRE
Sbjct: 186 PINLALHTYWNLHSHNSGNILSHKIQLLAGKITPVDDKLIPTGEITSITGTPYDFLEPRE 245

Query: 184 IGSRIKEVP-GYDINYVLEDLKSGHLKRAAIVKEDVSGRKLELWTNQPGVQFYTSNMLHD 242
           IGSRI E+P GYDINYV++     HL++ A+V E V+GRK+ELWTNQPGVQFYTSNM+  
Sbjct: 246 IGSRIHELPGGYDINYVIDGPIGKHLRKTAVVTEQVTGRKMELWTNQPGVQFYTSNMMKR 305

Query: 243 VKGKDGFIYQKFAGFCLETQGF 264
           V GK   +Y+K+ G CLETQGF
Sbjct: 306 VVGKGKAVYEKYGGLCLETQGF 327


>AT5G15140.1 | Symbols:  | aldose 1-epimerase family protein |
           chr5:4908686-4910670 FORWARD
          Length = 490

 Score =  301 bits (770), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 193/265 (72%), Gaps = 5/265 (1%)

Query: 4   DIVLGFESIEEYKNDTTYFGSIVGRVANRIGKSQFTLNGTVYKLVPNNGKNSLHGGPKGF 63
           DIVLG++S++ YK D  YFG+ VGRVANRIGK +F LNG  YK   N+GKN+LHGG KGF
Sbjct: 195 DIVLGYDSVKTYKTDKVYFGATVGRVANRIGKGKFKLNGKEYKTSVNDGKNTLHGGKKGF 254

Query: 64  SEVLWKVYSYN---KDSHITFTYDSFDGEEGYPGDLSVSVTYFVIGTNKIAVKMVAKPLN 120
            +V+W V  +    K  HI FT+ S DG++G+PG+LSV+VTY ++  N+++V M AKP +
Sbjct: 255 GDVVWAVAKHQYDGKKPHIVFTHTSPDGDQGFPGELSVTVTYKLVKDNELSVVMEAKPKD 314

Query: 121 KATPVNLALHTYFNLAGHNSGDILSHKIQLFAPEITPVDSELIPTGKITPVKGTPFDFLE 180
           KATPVNLA H+Y+NL GHNSGDILS +IQ+     TPVD ELIPTGKI PVKGT +DFL+
Sbjct: 315 KATPVNLAHHSYWNLGGHNSGDILSEEIQILGSGYTPVDGELIPTGKINPVKGTAYDFLQ 374

Query: 181 PREIGSRIKEVP-GYDINYVLEDLKSGHLKRAAIVKEDVSGRKLELWTNQPGVQFYTSNM 239
            R I   +K++  GYDINY L D K+  +++   + +  SGRK+EL  NQ G+QFYT  M
Sbjct: 375 LRPIKDNMKDLKTGYDINYCL-DGKAKKMRKIVELVDKKSGRKMELSGNQAGLQFYTGGM 433

Query: 240 LHDVKGKDGFIYQKFAGFCLETQGF 264
           L DVKGK+G +YQ F G CLETQ +
Sbjct: 434 LKDVKGKNGAVYQAFGGLCLETQSY 458


>AT3G17940.1 | Symbols:  | aldose 1-epimerase family protein |
           chr3:6143707-6145244 REVERSE
          Length = 341

 Score =  273 bits (699), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 146/269 (54%), Positives = 180/269 (66%), Gaps = 7/269 (2%)

Query: 3   ADIVLGFESIEEY-KNDTTYFGSIVGRVANRIGKSQFTLNGTVYKLVPNNGKNSLHGGPK 61
            D+VLGF+S++ Y K    YFG IVGRVANRI + +F+LNG  Y L  N   NSLHGG K
Sbjct: 43  GDVVLGFDSVDPYVKGLAPYFGCIVGRVANRIKEGKFSLNGVNYTLPINKPPNSLHGGNK 102

Query: 62  GFSEVLWKVYSYNKDSH---ITFTYDSFDGEEGYPGDLSVSVTYFVIGTNKIAVKMVAKP 118
           GF + +W+V  + +D     ITF Y S DGEEGYPG +SV+ TY +     + + M A P
Sbjct: 103 GFDKKIWEVAGHKRDGEKPFITFKYHSADGEEGYPGAVSVTATYTLTSATTMRLDMEAVP 162

Query: 119 LNKATPVNLALHTYFNLAGHNSGDILSHKIQLFAPEITPVDSELIPTGKITPVKGTPFDF 178
            NK TP+NLA HTY+NLAGH+SG+IL HKIQ++   ITPVD   +PTG+I PVKGTPFDF
Sbjct: 163 ENKDTPINLAQHTYWNLAGHDSGNILDHKIQIWGSHITPVDEYTVPTGEILPVKGTPFDF 222

Query: 179 LEPREIGSRIKEVP-GYDINYVLE--DLKSGHLKRAAIVKEDVSGRKLELWTNQPGVQFY 235
            E + IG  I EV  GYD NYVL+  D +   LK AA + +  S R L LWTN PG+QFY
Sbjct: 223 TEEKRIGESIGEVGIGYDHNYVLDCPDQEKEGLKHAAKLSDAASSRVLNLWTNVPGMQFY 282

Query: 236 TSNMLHDVKGKDGFIYQKFAGFCLETQGF 264
           T N ++ V GK   +Y K AG CLETQGF
Sbjct: 283 TGNYVNGVVGKGNAVYGKHAGVCLETQGF 311


>AT3G01260.1 | Symbols:  | aldose 1-epimerase/ carbohydrate binding
           / catalytic/ isomerase | chr3:80244-82005 REVERSE
          Length = 426

 Score =  173 bits (439), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 99/265 (37%), Positives = 155/265 (58%), Gaps = 24/265 (9%)

Query: 4   DIVLGFESIEEYKNDTTYFGSIVGRVANRIGKSQFTLNGTVYKLVPNNGKNSLHGGPKGF 63
           DIVLG++S+ ++  DT + G  + RVA++  K+             N+GKN++HGG K  
Sbjct: 154 DIVLGYDSVNDHMIDTVFCGVTLARVASKKEKA-----------AANDGKNTIHGGTKES 202

Query: 64  SEVLWKVYSYN---KDSHITFTYDSFDGEEGYPGDLSVSVTYFVIGTNKIAVKMVAKPLN 120
           S+V+W+V  +    K  +I FTY +    +G  G L V+VTY ++G N++ + M AK   
Sbjct: 203 SDVIWRVKKHKHNGKKPYIVFTYTT--SPDGDQGKLEVTVTYKLVGENRLKMVMQAKAKE 260

Query: 121 KATPVNLALHTYFNLAGHNSGDILSHKIQLFAPEITPVDSELIPTGKITPVKGTPFDFLE 180
           K TP+NL   +Y+NL GHN+ DI S +IQ+     T +D  L PTGKI  VKGTPFDF +
Sbjct: 261 KTTPLNLVHRSYWNLGGHNNEDIFSEEIQILGSGYTHLDDNLTPTGKILAVKGTPFDFRQ 320

Query: 181 PREIGSRIKEVP-GYDINYVLEDLKSGHLKRAAIVKEDVSGRKLELWTNQPGVQFYTSNM 239
            R I   I E+  GY INY L+ + +  +++   + ++ S  K+EL T+Q G++  T+  
Sbjct: 321 LRPIKDNINELKTGYGINYCLDGV-ANKMRKVVELVDNKSKIKMELSTDQSGLRLKTT-- 377

Query: 240 LHDVKGKDGFIYQKFAGFCLETQGF 264
               K K+G +++ ++G CLE+   
Sbjct: 378 ----KPKNGSVHKAYSGLCLESHAI 398