Jatropha Genome Database

JcCA0128511.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0128511.20 - phase: 0 /partial
         (232 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08510.1 | Symbols: FATB | FATB (fatty acyl-ACP thioesterases...   184   4e-47
AT3G25110.1 | Symbols: AtFaTA | AtFaTA (Arabidopsis FatA acyl-AC...   170   8e-43
AT4G13050.1 | Symbols:  | acyl-(acyl carrier protein) thioestera...   164   4e-41

>AT1G08510.1 | Symbols: FATB | FATB (fatty acyl-ACP thioesterases
           B); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase
           | chr1:2691546-2693409 REVERSE
          Length = 412

 Score =  184 bits (467), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 86/150 (57%), Positives = 109/150 (72%), Gaps = 1/150 (0%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
           G+VVE+DTWV  SGKNGMRRDWLVR   TG+   RA+S WVMMN+ TRRLSK+PEEVR E
Sbjct: 212 GDVVEVDTWVSQSGKNGMRRDWLVRDCNTGETLTRASSVWVMMNKLTRRLSKIPEEVRGE 271

Query: 61  IAPWFIEKQAIKEEVPEKIAKLDDK-ARYVVTNLKPKRSDLDMNQHVNNVKYVRWMLETL 119
           I P+F+    +  E   K+ K+DDK A YV + L P+ SDLD+NQHVNNVKY+ W+LE+ 
Sbjct: 272 IEPYFVNSDPVLAEDSRKLTKIDDKTADYVRSGLTPRWSDLDVNQHVNNVKYIGWILESA 331

Query: 120 PDQFFENHQLSGITLEYKRECGSSDIVESL 149
           P    E  +L  +TLEY+RECG   +++SL
Sbjct: 332 PVGIMERQKLKSMTLEYRRECGRDSVLQSL 361


>AT3G25110.1 | Symbols: AtFaTA | AtFaTA (Arabidopsis FatA acyl-ACP
           thioesterase); acyl carrier/ acyl-[acyl-carrier-protein]
           hydrolase | chr3:9146589-9148273 REVERSE
          Length = 362

 Score =  170 bits (430), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 134/232 (57%), Gaps = 38/232 (16%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
           G+VVEI+TW  + G+ G RRDW+++   TG+V  RATS WVMMN+ TRRL K+ ++VR E
Sbjct: 157 GDVVEIETWCQSEGRIGTRRDWILKDSVTGEVTGRATSKWVMMNQDTRRLQKVSDDVRDE 216

Query: 61  IAPWFIE--KQAIKEE---VPEKIAKLDDKARYVVTNLKPKRSDLDMNQHVNNVKYVRWM 115
              +  +  + A  EE     +KI KL+D A+Y +  LKP+R+DLDMNQHVNNV Y+ W+
Sbjct: 217 YLVFCPQEPRLAFPEENNRSLKKIPKLEDPAQYSMIGLKPRRADLDMNQHVNNVTYIGWV 276

Query: 116 LETLPDQFFENHQLSGITLEYKRECGSSDIVESLCEPDEEEGIIN----TGLKQNNDKSL 171
           LE++P +  + H+L  ITL+Y+REC   D+V+SL     E G  N    +G + +ND   
Sbjct: 277 LESIPQEIVDTHELQVITLDYRRECQQDDVVDSLTTTTSEIGGTNGSATSGTQGHNDS-- 334

Query: 172 FNGFSLPSEIMEGNGFLSSLEKTPLKYTHLLVAKGKTQSEEIVRGKTIWKKK 223
                                    ++ HLL   G  Q  EI RG T+W+KK
Sbjct: 335 -------------------------QFLHLLRLSGDGQ--EINRGTTLWRKK 359


>AT4G13050.1 | Symbols:  | acyl-(acyl carrier protein) thioesterase,
           putative / acyl-ACP thioesterase, putative /
           oleoyl-(acyl-carrier protein) hydrolase, putative /
           S-acyl fatty acid synthase thioesterase, putative |
           chr4:7617739-7619355 FORWARD
          Length = 367

 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 24/228 (10%)

Query: 1   GEVVEIDTWVGASGKNGMRRDWLVRSQATGQVFARATSTWVMMNEKTRRLSKMPEEVRAE 60
            +VVEI+TW  + G+ G RRDW+++  ATG+V  RATS WVMMN+ TRRL ++ +EVR E
Sbjct: 156 SDVVEIETWCQSEGRIGTRRDWILKDCATGEVIGRATSKWVMMNQDTRRLQRVTDEVRDE 215

Query: 61  IAPWFIE--KQAIKEE---VPEKIAKLDDKARYVVTNLKPKRSDLDMNQHVNNVKYVRWM 115
              +     + A  EE     +KI KL+D A+Y +  LKP+R+DLDMNQHVNNV Y+ W+
Sbjct: 216 YLVFCPPEPRLAFPEENNSSLKKIPKLEDPAQYSMLGLKPRRADLDMNQHVNNVTYIGWV 275

Query: 116 LETLPDQFFENHQLSGITLEYKRECGSSDIVESLCEPDEEEGIINTGLKQNNDKSLFNGF 175
           LE++P +  + H+L  ITL+Y+REC   DIV+SL   +    ++                
Sbjct: 276 LESIPQEIIDTHELKVITLDYRRECQQDDIVDSLTTSETPNEVV---------------- 319

Query: 176 SLPSEIMEGNGFLSSLEKTPLKYTHLLVAKGKTQSEEIVRGKTIWKKK 223
              S++   NG  +S ++   +   L + +     +EI RG+T W+KK
Sbjct: 320 ---SKLTGTNGSTTSSKREHNESHFLHILRLSENGQEINRGRTQWRKK 364