Jatropha Genome Database
- JcCA0128121.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0128121.10 - phase: 2 /partial
(579 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 868 0.0
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 502 e-142
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 486 e-137
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 485 e-137
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 483 e-136
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 474 e-134
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 473 e-133
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 469 e-132
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 469 e-132
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 469 e-132
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 468 e-132
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 466 e-131
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 460 e-129
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 456 e-128
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 455 e-128
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 452 e-127
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 452 e-127
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 449 e-126
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 448 e-126
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 447 e-126
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 447 e-126
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 447 e-125
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 445 e-125
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 444 e-125
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 442 e-124
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 441 e-124
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 440 e-123
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 439 e-123
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 439 e-123
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 436 e-122
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 435 e-122
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 434 e-122
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 433 e-121
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 432 e-121
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 432 e-121
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 432 e-121
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 431 e-121
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 430 e-120
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 430 e-120
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 429 e-120
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 427 e-120
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 423 e-118
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 423 e-118
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 422 e-118
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 420 e-117
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 419 e-117
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 419 e-117
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 418 e-117
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 417 e-116
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 416 e-116
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 414 e-115
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 413 e-115
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 412 e-115
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 412 e-115
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 409 e-114
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 408 e-114
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 407 e-114
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 403 e-112
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 401 e-112
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 398 e-111
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 398 e-111
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-111
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 395 e-110
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 395 e-110
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 394 e-110
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 394 e-110
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 391 e-109
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 391 e-109
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 390 e-108
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 388 e-108
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 387 e-107
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 387 e-107
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 386 e-107
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 383 e-106
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 380 e-105
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 376 e-104
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 371 e-103
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 371 e-103
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 371 e-103
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 366 e-101
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 347 9e-96
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 345 7e-95
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 344 8e-95
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 344 1e-94
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 339 4e-93
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 4e-93
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 337 2e-92
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 335 4e-92
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 3e-91
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 5e-90
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 7e-90
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 326 3e-89
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 324 9e-89
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 4e-88
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 321 7e-88
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 2e-87
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 5e-87
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 8e-87
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 317 1e-86
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 317 2e-86
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 315 4e-86
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 2e-85
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 2e-85
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 2e-85
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 2e-85
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 3e-85
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 311 6e-85
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 307 1e-83
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 306 2e-83
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 303 2e-82
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 2e-82
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 2e-81
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 2e-81
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 298 8e-81
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 297 1e-80
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 3e-80
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 4e-80
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 4e-80
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 293 2e-79
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 1e-78
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 2e-78
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 2e-78
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 3e-78
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 4e-78
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 1e-77
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 287 1e-77
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 1e-77
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 286 3e-77
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 285 6e-77
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 1e-76
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 283 3e-76
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 3e-76
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 1e-75
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 2e-75
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 3e-75
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 4e-75
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 6e-75
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 277 1e-74
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 3e-74
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 2e-73
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 4e-72
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 7e-72
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 1e-71
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 2e-71
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 2e-71
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 5e-71
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 262 4e-70
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 8e-70
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 3e-69
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 4e-68
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 9e-68
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 1e-67
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 7e-67
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 9e-67
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 251 1e-66
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 248 9e-66
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 1e-65
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 1e-65
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 2e-65
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 1e-63
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 2e-63
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 7e-62
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 9e-62
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 5e-60
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 8e-60
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 9e-60
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 2e-59
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 5e-59
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 7e-59
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 7e-59
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 2e-58
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 1e-56
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 216 2e-56
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 4e-53
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 8e-53
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 9e-52
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 4e-51
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 184 2e-46
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 1e-43
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 173 2e-43
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 5e-39
AT1G47580.1 | Symbols: | lipoyltransferase, putative | chr1:174... 147 1e-35
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 3e-28
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 113 3e-25
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 113 3e-25
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 5e-24
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 108 9e-24
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 107 2e-23
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 107 2e-23
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 100 2e-21
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 100 3e-21
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 5e-21
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 99 9e-21
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 98 1e-20
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 6e-20
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 95 1e-19
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 95 1e-19
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 91 1e-18
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 90 4e-18
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 89 6e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 88 1e-17
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 87 2e-17
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 87 4e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-17
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 81 2e-15
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 3e-15
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 80 3e-15
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 6e-15
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 9e-15
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 79 1e-14
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 79 1e-14
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 74 2e-13
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 74 3e-13
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 74 4e-13
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 73 5e-13
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 5e-13
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 72 1e-12
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 1e-11
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 68 2e-11
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 67 4e-11
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 66 5e-11
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 65 8e-11
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 64 2e-10
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 64 3e-10
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 61 2e-09
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G77150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 7e-09
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 9e-09
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 58 2e-08
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 56 6e-08
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 55 1e-07
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 55 1e-07
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 9e-07
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 50 3e-06
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 50 5e-06
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/578 (70%), Positives = 489/578 (84%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
+R I+SWN MI+LHM G++DLA+AQF+QM+ERDIVTWNSMI+G+NQ G+D AL++FS
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
ML+DS L PD+FTLAS LSAC NLE + +GKQIHS+I+ T FDISG V NALISMY++ G
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
GVE ARR++EQ DL FTALLDGY KLGD+ A+ IF SL++RDVVAWTAMIVGY
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
Q+G +A+ LFR+M G RPNS+TLAAMLSV+S ASL+HGKQIH SA++S E S+
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
SV NALITMYAKAG+I +A + F+LI DTVSW+SMIIALAQHG EEA+ELFE ML
Sbjct: 449 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
G+ PDHITYVGV SACTH GLV QGR YF++M V KI PTLSHYACM+DL+GRAGLLQ
Sbjct: 509 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 568
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYS 421
EA +FIE MPIEPDV+ WGSLLS+C+V+KN+DL K+AAERLLL+EP+NSGAYSALAN+YS
Sbjct: 569 EAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 628
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWE 481
ACGKWE+AAKIRK M D VKKEQG SW+E++++VH+FG ED HP+K+EIY M KIW+
Sbjct: 629 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWD 688
Query: 482 EIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICND 541
EIKK+G++PDT SVLHDLE EVK+++LR+HSEKLAIAFG+ISTP+ TTLRIMKNLR+CND
Sbjct: 689 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCND 748
Query: 542 CHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
CHTAIKFISKL+GREIIVRD TRFHHFKDGFCSCRDYW
Sbjct: 749 CHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 231/457 (50%), Gaps = 43/457 (9%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
LR+ SWN ++S + G +D F Q+ +RD V+W +MI GY G +A+ +
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M+++ ++P +FTL + L++ M GK++HS+I++ + +V N+L++MYAK G
Sbjct: 137 MVKEG-IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+A+ V ++ + D+ ++ A++ + ++G + A F+ + RD+V W +MI G+
Sbjct: 196 DPMMAKFVFDRMVVRDIS--SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 182 VQNGLNDDALELFRAMTKEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
Q G + AL++F M ++ P+ FTLA++LS + L GKQIH+ + + D+S
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 241 ISVGNALITMYAKAGSIDNAQKVFN--------------------------------LIC 268
V NALI+MY++ G ++ A+++ +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR 328
+ D V+W++MI+ QHG EAI LF M+ G P+ T +LS + + + G+
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 329 SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV 388
+I ++S +I +Y +AG + A + + + E D ++W S++ +
Sbjct: 434 QIHGSAVKSGEIY-SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 389 YKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSAC 423
+ + + A E +L+ + PD + V+SAC
Sbjct: 493 HGHAEEALELFETMLMEGLRPD----HITYVGVFSAC 525
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 162/340 (47%), Gaps = 44/340 (12%)
Query: 70 PDKFTLASTLSACTNLENMNLGKQ--------IHSYIIRTEFDISGAVQNALISMYAKTG 121
P +L++ L CTNL ++ K +H +I++ S + N L+++Y+KTG
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
AR++ ++ + A ++ +L Y+K GD+ + FD L RD V+WT MIVGY
Sbjct: 64 YALHARKLFDEMPLRT--AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
G A+ + M KEG P FTL +L+ + + GK++H+ ++ ++
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV 181
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLIC------WN------------------------N 271
SV N+L+ MYAK G A+ VF+ + WN
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 272 DTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSACTHVGLVEQGRS- 329
D V+W+SMI Q G A+++F KML + PD T VLSAC ++ + G+
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
+ +++ + I + + +I +Y R G ++ A + IE
Sbjct: 302 HSHIVTTGFDISGIVLN--ALISMYSRCGGVETARRLIEQ 339
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 502 bits (1292), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/577 (42%), Positives = 379/577 (65%), Gaps = 11/577 (1%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSER-DIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
SW M++ ++ +G DL + M + +V +N+MI+GY GF +EALE+ M+
Sbjct: 221 SWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS- 279
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
S ++ D+FT S + AC + LGKQ+H+Y++R E D S N+L+S+Y K G +
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDE 338
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
AR + E+ DL +++ ALL GY G I A+ IF ++ +++++W MI G +NG
Sbjct: 339 ARAIFEKMPAKDL--VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENG 396
Query: 186 LNDDALELFRAMTKEGPRPNSFTLA-AMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
++ L+LF M +EG P + + A+ S + GA N G+Q HA ++ D S+S G
Sbjct: 397 FGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN-GQQYHAQLLKIGFDSSLSAG 455
Query: 245 NALITMYAKAGSIDNAQKVF-NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
NALITMYAK G ++ A++VF + C D+VSW+++I AL QHG G EA++++E+ML G
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCL--DSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
I PD IT + VL+AC+H GLV+QGR YF+ M +V++I P HYA +IDL R+G +A
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 364 FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
IE++P +P W +LLS C+V+ N++L IAA++L + P++ G Y L+N+++A
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAAT 633
Query: 424 GKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEI 483
G+WE+ A++RKLM DRGVKKE SW+E++ +VH F +D+ HP+ + +Y + + +E+
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEM 693
Query: 484 KKLGFIPDTDSVLHDLEIEV-KDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDC 542
++LG++PDT VLHD+E + K+ +L HSEK+A+AFG++ P TT+RI KNLR C DC
Sbjct: 694 RRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDC 753
Query: 543 HTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
H +F+S ++ R+II+RD RFHHF++G CSC ++W
Sbjct: 754 HNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 175/351 (49%), Gaps = 49/351 (13%)
Query: 76 ASTLSACTNLE--NMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
A+ L C L ++ L + +H II F + N LI +Y K+ + AR++ +
Sbjct: 16 AANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFD-- 73
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFD--SLRNRDVVAWTAMIVGYVQNGLNDDAL 191
EIS+ D IA T ++ GY GDIT AR +F+ + RD V + AMI G+ N A+
Sbjct: 74 EISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAI 133
Query: 192 ELFRAMTKEGPRPNSFTLAAMLS-VSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
LF M EG +P++FT A++L+ ++ Q HA+A++S SV NAL+++
Sbjct: 134 NLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 251 YAKAGS----IDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGE------------- 290
Y+K S + +A+KVF+ I D SW++M+ ++G LGE
Sbjct: 194 YSKCASSPSLLHSARKVFDEI-LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 291 ----------------EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
EA+E+ +M++ GIE D TY V+ AC GL++ G+ +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK---QVH 309
Query: 335 ASVHKIEPTLSHY-ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
A V + E H+ ++ LY + G EA E MP + D+++W +LLS
Sbjct: 310 AYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS 359
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 147/307 (47%), Gaps = 37/307 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+ + SWN ++S +++SG I A F++M E++I++W MI+G ++GF +E L+LFS M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ +P + + + +C L G+Q H+ +++ FD S + NALI+MYAK G
Sbjct: 409 KRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
VE AR Q+F ++ D V+W A+I
Sbjct: 468 VEEAR---------------------------------QVFRTMPCLDSVSWNALIAALG 494
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS-AIRSREDLSI 241
Q+G +A++++ M K+G RP+ TL +L+ S ++ G++ S R
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
LI + ++G +A+ V + + W +++ HG E I +K+
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKL-- 612
Query: 302 LGIEPDH 308
G+ P+H
Sbjct: 613 FGLIPEH 619
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 486 bits (1252), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/644 (39%), Positives = 387/644 (60%), Gaps = 69/644 (10%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
++I N +I+L++ G + A F + + +VTWNSMI+GY +G D EAL +F SM
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDIS---------------- 106
+ + ++ + + AS + C NL+ + +Q+H +++ F
Sbjct: 287 -RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 107 -----------GAVQN-----ALISMYAKTGGVEVA--------RRVVEQSEIS------ 136
G V N A+IS + + G E A R+ V +E +
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 137 -------------------DLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAM 177
+ + TALLD Y KLG + A ++F + ++D+VAW+AM
Sbjct: 406 ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 178 IVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSV-SSRGASLNHGKQIHASAIRSR 236
+ GY Q G + A+++F +TK G +PN FT +++L+V ++ AS+ GKQ H AI+SR
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELF 296
D S+ V +AL+TMYAK G+I++A++VF D VSW+SMI AQHG +A+++F
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQ-REKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 297 EKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGR 356
++M ++ D +T++GV +ACTH GLVE+G YF++M KI PT H +CM+DLY R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSAL 416
AG L++A K IENMP W ++L++C+V+K +L ++AAE+++ ++P++S AY L
Sbjct: 645 AGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 417 ANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMM 476
+N+Y+ G W++ AK+RKLMN+R VKKE G SW+E++N+ + F A D HP KD+IY +
Sbjct: 705 SNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Query: 477 DKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNL 536
+ + +K LG+ PDT VL D++ E K+ +L HSE+LAIAFG+I+TP+ + L I+KNL
Sbjct: 765 EDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNL 824
Query: 537 RICNDCHTAIKFISKLMGREIIVRDVTRFHHF-KDGFCSCRDYW 579
R+C DCH IK I+K+ REI+VRD RFHHF DG CSC D+W
Sbjct: 825 RVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 182/374 (48%), Gaps = 40/374 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ +M F +M ER++VTW ++I+GY ++ + E L LF M Q+ +P
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM-QNEGTQP 192
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ FT A+ L G Q+H+ +++ D + V N+LI++Y K G V AR +
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+++E+ + VV W +MI GY NGL+ +A
Sbjct: 253 DKTEV---------------------------------KSVVTWNSMISGYAANGLDLEA 279
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L +F +M R + + A+++ + + L +Q+H S ++ ++ AL+
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y+K ++ +A ++F I + VSW++MI Q+ EEA++LF +M G+ P+ T
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
Y +L+A + ++ + ++ + ++ T+ ++D Y + G ++EA K +
Sbjct: 400 YSVILTA---LPVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGI 454
Query: 371 PIEPDVIAWGSLLS 384
+ D++AW ++L+
Sbjct: 455 D-DKDIVAWSAMLA 467
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 172/372 (46%), Gaps = 42/372 (11%)
Query: 16 MNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTL 75
++S R+ A F + RD ++ S++ G+++ G +EA LF + + ++ D
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN-IHRLGMEMDCSIF 96
Query: 76 ASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEI 135
+S L L + G+Q+H I+ F
Sbjct: 97 SSVLKVSATLCDELFGRQLHCQCIKFGF-------------------------------- 124
Query: 136 SDLDAIAF-TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
LD ++ T+L+D Y K + R++FD ++ R+VV WT +I GY +N +ND+ L LF
Sbjct: 125 --LDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
M EG +PNSFT AA L V + G Q+H +++ D +I V N+LI +Y K
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
G++ A+ +F+ V+W+SMI A +GL EA+ +F M + ++ V
Sbjct: 243 GNVRKARILFDKT-EVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSH--YACMIDLYGRAGLLQEAFKFIENMPI 372
+ C + +++ R L SV K ++ Y + + +A + + +
Sbjct: 302 IKLCAN---LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 373 EPDVIAWGSLLS 384
+V++W +++S
Sbjct: 359 VGNVVSWTAMIS 370
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/577 (40%), Positives = 356/577 (61%), Gaps = 14/577 (2%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++ SWN ++ + +I A F M+ RD+V+WN++I GY Q G EA +LF
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF---- 273
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYII-RTEFDISGAVQNALISMYAKTGG 122
D S D FT + +S + +++ + R E NA+++ Y +
Sbjct: 274 -DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAGYVQGER 327
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E+A+ + + ++ + ++ GYA+ G I+ A+ +FD + RD V+W AMI GY
Sbjct: 328 MEMAKELFDVMPCRNVST--WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
Q+G + +AL LF M +EG R N + ++ LS + +L GKQ+H ++ +
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 445
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
VGNAL+ MY K GSI+ A +F + D VSW++MI ++HG GE A+ FE M
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
G++PD T V VLSAC+H GLV++GR YF M + + P HYACM+DL GRAGLL++
Sbjct: 505 GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 363 AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSA 422
A ++NMP EPD WG+LL + +V+ N +LA+ AA+++ +EP+NSG Y L+N+Y++
Sbjct: 565 AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYAS 624
Query: 423 CGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEE 482
G+W D K+R M D+GVKK G SW+EIQN+ H F D HP+KDEI+ ++++
Sbjct: 625 SGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLR 684
Query: 483 IKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDC 542
+KK G++ T VLHD+E E K++++RYHSE+LA+A+GI+ +R++KNLR+C DC
Sbjct: 685 MKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDC 744
Query: 543 HTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
H AIK+++++ GR II+RD RFHHFKDG CSC DYW
Sbjct: 745 HNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 154/307 (50%), Gaps = 37/307 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++++WN MI+ + G+I A F +M +RD V+W +MIAGY+Q G EAL LF M
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ + ++ + +S LS C ++ + LGKQ+H +++ ++ V NAL+ MY K G
Sbjct: 401 EREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E A + + E++ D +++ ++ GY++
Sbjct: 460 IEEANDLFK--EMAGKDIVSWNTMIAGYSR------------------------------ 487
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G + AL F +M +EG +P+ T+ A+LS S ++ G+Q + + + S
Sbjct: 488 -HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 546
Query: 243 VGNA-LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
A ++ + +AG +++A + + + D W +++ A HG E A +K+ A
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA 606
Query: 302 LGIEPDH 308
+ EP++
Sbjct: 607 M--EPEN 611
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 92/381 (24%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
DI WN I+ Y + G EAL +F M + SS+
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV-------------------------- 96
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
SY N +IS Y + G E+AR++ + E+ + D +++ ++ GY +
Sbjct: 97 -SY-------------NGMISGYLRNGEFELARKLFD--EMPERDLVSWNVMIKGYVRNR 140
Query: 155 DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
++ AR++F+ + RDV +W M+ GY QNG DDA +F M P N + A+LS
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLS 196
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNAL--------------------------- 247
+ + + + +SRE+ ++ N L
Sbjct: 197 AYVQNSKMEEACML----FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS 252
Query: 248 ----ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
IT YA++G ID A+++F+ D +W++M+ Q+ + EEA ELF+KM
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESP-VQDVFTWTAMVSGYIQNRMVEEARELFDKM---- 307
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
E + +++ +L+ +E + F++M + +S + MI Y + G + EA
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQCGKISEA 362
Query: 364 FKFIENMPIEPDVIAWGSLLS 384
+ MP + D ++W ++++
Sbjct: 363 KNLFDKMP-KRDPVSWAAMIA 382
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 138/308 (44%), Gaps = 22/308 (7%)
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
+ D D + + Y + G A ++F + V++ MI GY++NG EL
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNG----EFEL 113
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
R + E P + + M+ R +L +++ I D + N +++ YA+
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF--EIMPERD--VCSWNTMLSGYAQ 169
Query: 254 AGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVG 313
G +D+A+ VF+ + ND VSW++++ A Q+ EEA LF+ + +++
Sbjct: 170 NGCVDDARSVFDRMPEKND-VSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNC 224
Query: 314 VLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE 373
+L + + R +F+ M + +S + +I Y ++G + EA + + P++
Sbjct: 225 LLGGFVKKKKIVEARQFFDSM----NVRDVVS-WNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 374 PDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIR 433
DV W +++S Y + + A E + N +++A+ Y + E A ++
Sbjct: 280 -DVFTWTAMVSG---YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 434 KLMNDRGV 441
+M R V
Sbjct: 336 DVMPCRNV 343
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
A I +Q L C ++D W+ I + + G EA+ +F++M ++Y
Sbjct: 43 ATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSY 98
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP 371
G++S G E R F+ M E L + MI Y R L +A + E MP
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMP-----ERDLVSWNVMIKGYVRNRNLGKARELFEIMP 153
Query: 372 IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAK 431
E DV +W ++LS VD A+ +R+ N +++AL + Y K E+A
Sbjct: 154 -ERDVCSWNTMLSGYAQNGCVDDARSVFDRM---PEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 432 IRK 434
+ K
Sbjct: 210 LFK 212
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/551 (42%), Positives = 354/551 (64%), Gaps = 8/551 (1%)
Query: 33 ERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGK 92
E +IV+WN +++G+N+ G+ KEA+ +F + PD+ T++S L + + E +N+G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 93 QIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAK 152
IH Y+I+ V +A+I MY K+G V + Q E+ ++A A + G ++
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM--MEAGVCNAYITGLSR 330
Query: 153 LGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT 208
G + A ++F+ + + +VV+WT++I G QNG + +ALELFR M G +PN T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC 268
+ +ML A+L HG+ H A+R ++ VG+ALI MYAK G I+ +Q VFN++
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR 328
N V W+S++ + HG +E + +FE ++ ++PD I++ +LSAC VGL ++G
Sbjct: 451 TKN-LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 329 SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV 388
YF +M+ + I+P L HY+CM++L GRAG LQEA+ I+ MP EPD WG+LL+SC++
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRL 569
Query: 389 YKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
NVDLA+IAAE+L +EP+N G Y L+N+Y+A G W + IR M G+KK G S
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 449 WLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLL 508
W++++N V+ A D HPQ D+I + MD+I +E++K G P+ D LHD+E + ++++L
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQML 689
Query: 509 RYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHF 568
HSEKLA+ FG+++TP+ T L+++KNLRIC DCH IKFIS GREI +RD RFHHF
Sbjct: 690 WGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHF 749
Query: 569 KDGFCSCRDYW 579
KDG CSC D+W
Sbjct: 750 KDGICSCGDFW 760
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 215/459 (46%), Gaps = 53/459 (11%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
Q + + I +++S+I + +++ +FS M L PD L + C L
Sbjct: 73 LQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG-LIPDSHVLPNLFKVCAELSA 131
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+GKQIH + D+ VQ ++ MY + G + AR+V ++ +SD D + +ALL
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDR--MSDKDVVTCSALL 189
Query: 148 DGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
YA+ G + +I + + ++V+W ++ G+ ++G + +A+ +F+ + G
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR--------------------------- 236
P+ T++++L LN G+ IH I+
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 237 ----EDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLG 289
E + V NA IT ++ G +D A ++F L + VSW+S+I AQ+G
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
EA+ELF +M G++P+H+T +L AC ++ + GRS VH ++ + +
Sbjct: 370 IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSA 428
Query: 350 MIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL--LIEP 407
+ID+Y + G + + + + NM +++ W SL++ ++ E L+ ++P
Sbjct: 429 LIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 408 DNSGAYSALANVYSACGK---WEDAAKIRKLMNDR-GVK 442
D + + ++ SACG+ ++ K K+M++ G+K
Sbjct: 488 D----FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 1/184 (0%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
D L+ Y+ A + S+ + + +++++I + L ++ +F M
Sbjct: 49 DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
G P+S L + V + ++ GKQIH + S D+ V ++ MY + G +
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMG 168
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
+A+KVF+ + + D V+ S+++ A A+ G EE + + +M + GIE + +++ G+LS
Sbjct: 169 DARKVFDRMS-DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 319 THVG 322
G
Sbjct: 228 NRSG 231
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 80/140 (57%), Gaps = 5/140 (3%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I ++ GRI+L+ F M +++V WNS++ G++ HG KE + +F S+++ + LKP
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR-TRLKP 487
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVARR 128
D + S LSAC + + G + + ++ E+ I +++ ++++ + G ++ A
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWK-YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 129 VVEQSEISDLDAIAFTALLD 148
++++ + D+ + ALL+
Sbjct: 547 LIKEMPF-EPDSCVWGALLN 565
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/573 (40%), Positives = 360/573 (62%), Gaps = 6/573 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I + + G +D A F + E+D+V+WNSMI G+ Q G +ALELF M + +
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM-ESEDV 228
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
K T+ LSAC + N+ G+Q+ SYI +++ + NA++ MY K G +E A+R
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ + E + D + +T +LDGYA D AR++ +S+ +D+VAW A+I Y QNG +
Sbjct: 289 LFDAME--EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 189 DALELFRAMT-KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+AL +F + ++ + N TL + LS ++ +L G+ IH+ + ++ V +AL
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
I MY+K G ++ +++VFN + D WS+MI LA HG G EA+++F KM ++P+
Sbjct: 407 IHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
+T+ V AC+H GLV++ S F+ M S + I P HYAC++D+ GR+G L++A KFI
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
E MPI P WG+LL +CK++ N++LA++A RLL +EP N GA+ L+N+Y+ GKWE
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWE 585
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLG 487
+ +++RK M G+KKE G S +EI +H F + D+ HP +++Y + ++ E++K G
Sbjct: 586 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645
Query: 488 FIPDTDSVLHDL-EIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAI 546
+ P+ VL + E E+K++ L HSEKLAI +G+IST +R++KNLR+C DCH+
Sbjct: 646 YEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVA 705
Query: 547 KFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
K IS+L REIIVRD RFHHF++G CSC D+W
Sbjct: 706 KLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 141/272 (51%), Gaps = 7/272 (2%)
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSS 217
AR++FD + + AW +I Y ++ F M E PN +T ++ ++
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 218 RGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWS 277
+SL+ G+ +H A++S + V N+LI Y G +D+A KVF I D VSW+
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI-KEKDVVSWN 201
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASV 337
SMI Q G ++A+ELF+KM + ++ H+T VGVLSAC + +E GR + +
Sbjct: 202 SMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE- 260
Query: 338 HKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKI 397
+++ L+ M+D+Y + G +++A + + M E D + W ++L + ++ + A+
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAR- 318
Query: 398 AAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
E L + + A++AL + Y GK +A
Sbjct: 319 --EVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 179/397 (45%), Gaps = 72/397 (18%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
++ A F ++ + + WN++I Y ++ F M+ +S P+K+T +
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
A + +++LG+ +H +++ V N+LI Y G ++ A +V + I + D
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF--TTIKEKDV 197
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
+++ ++++G+ + G A ++F + + DV A +VG
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG-------------------- 237
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
+LS ++ +L G+Q+ + +R ++++++ NA++ MY K GSI++A
Sbjct: 238 -----------VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 261 QKVFNL------ICWNN------------------------DTVSWSSMIIALAQHGLGE 290
+++F+ + W D V+W+++I A Q+G
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 291 EAIELFEKM-LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
EA+ +F ++ L ++ + IT V LSAC VG +E GR + + H I +
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSA 405
Query: 350 MIDLYGRAGLLQ---EAFKFIENMPIEPDVIAWGSLL 383
+I +Y + G L+ E F +E + DV W +++
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVE----KRDVFVWSAMI 438
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 75/317 (23%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
+W M+ + S + A M ++DIV WN++I+ Y Q+G EAL +F +
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
++K ++ TL STLSAC + + LG+ IHSYI + ++ V +ALI MY+K G +E
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
+R ++F+S+ RDV W+AMI G +G
Sbjct: 419 SR---------------------------------EVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
++A+++F M + +PN T + S
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH--------------------------- 478
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVS----WSSMIIALAQHGLGEEAIELFEKMLA 301
G +D A+ +F+ + N V ++ ++ L + G E+A++ E A
Sbjct: 479 --------TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE---A 527
Query: 302 LGIEPDHITYVGVLSAC 318
+ I P + +L AC
Sbjct: 528 MPIPPSTSVWGALLGAC 544
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/577 (41%), Positives = 352/577 (61%), Gaps = 36/577 (6%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+ +N ++ + G I+ AL F+ M E+D V+W +MI G Q+G KEA+E F M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ LK D++ S L AC L +N GKQIH+ IIRT F V +ALI MY
Sbjct: 262 -KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY----- 315
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
K + A+ +FD ++ ++VV+WTAM+VGY
Sbjct: 316 ----------------------------CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
Q G ++A+++F M + G P+ +TL +S + +SL G Q H AI S ++
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
V N+L+T+Y K G ID++ ++FN + D VSW++M+ A AQ G E I+LF+KM+
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMN-VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
G++PD +T GV+SAC+ GLVE+G+ YF LM S + I P++ HY+CMIDL+ R+G L+E
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 363 AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSA 422
A +FI MP PD I W +LLS+C+ N+++ K AAE L+ ++P + Y+ L+++Y++
Sbjct: 527 AMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYAS 586
Query: 423 CGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEE 482
GKW+ A++R+ M ++ VKKE G SW++ + ++H F A+D P D+IY ++++ +
Sbjct: 587 KGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNK 646
Query: 483 IKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDC 542
I G+ PDT V HD+E VK K+L YHSE+LAIAFG+I P +R+ KNLR+C DC
Sbjct: 647 IIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDC 706
Query: 543 HTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
H A K IS + GREI+VRD RFH FKDG CSC D+W
Sbjct: 707 HNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 210/386 (54%), Gaps = 14/386 (3%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++ SWN ++ + +G I + F+++ +RD VTWN +I GY+ G A++ +++M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+D S + TL + L ++ +++LGKQIH +I+ F+ V + L+ MYA G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
A++V + D + + + +L+ G G I A Q+F + +D V+W AMI G Q
Sbjct: 191 SDAKKVFYG--LDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQ 247
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
NGL +A+E FR M +G + + + ++L ++N GKQIHA IR+ I V
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
G+ALI MY K + A+ VF+ + N VSW++M++ Q G EEA+++F M G
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKN-VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC----MIDLYGRAGL 359
I+PDH T +SAC +V +E+G + I L HY ++ LYG+ G
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHG-----KAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSS 385
+ ++ + M + D ++W +++S+
Sbjct: 422 IDDSTRLFNEMNVR-DAVSWTAMVSA 446
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/573 (41%), Positives = 351/573 (61%), Gaps = 15/573 (2%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKE--ALELFSSMLQDSSLKPDKFTLAST 78
+D A F QM +R+ +WN++I G+++ DK A+ LF M+ D ++P++FT S
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR-----RVVEQS 133
L AC + GKQIH ++ F V + L+ MY G ++ AR ++E+
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 134 EI-------SDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
+ D + + + ++DGY +LGD AR +FD +R R VV+W MI GY NG
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
DA+E+FR M K RPN TL ++L SR SL G+ +H A S + +G+A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
LI MY+K G I+ A VF + N ++WS+MI A HG +AI+ F KM G+ P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPREN-VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
+ Y+ +L+AC+H GLVE+GR YF+ M SV +EP + HY CM+DL GR+GLL EA +F
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKW 426
I NMPI+PD + W +LL +C++ NV++ K A L+ + P +SGAY AL+N+Y++ G W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKL 486
+ +++R M ++ ++K+ G S ++I +H F ED HP+ EI M+ +I ++++
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Query: 487 GFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAI 546
G+ P T VL +LE E K+ +L YHSEK+A AFG+IST +RI+KNLRIC DCH++I
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 547 KFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
K ISK+ R+I VRD RFHHF+DG CSC DYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 155/354 (43%), Gaps = 70/354 (19%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
I WN+MI +M G A F +M +R +V+WN+MI+GY+ +GF K+A+E+F M +
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM-K 266
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
++P+ TL S L A + L ++ LG+ +H Y + I + +ALI MY+K G +E
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
A V F+ L +V+ W+AMI G+ +
Sbjct: 327 KAIHV---------------------------------FERLPRENVITWSAMINGFAIH 353
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
G DA++ F M + G RP+ +L+ S G + G++ + +
Sbjct: 354 GQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV----------- 402
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
S+D + + M+ L + GL +EA E +L + I
Sbjct: 403 -----------SVDGLEPRIE---------HYGCMVDLLGRSGLLDEAEEF---ILNMPI 439
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG 358
+PD + + +L AC G VE G+ N++ + + Y + ++Y G
Sbjct: 440 KPDDVIWKALLGACRMQGNVEMGKRVANILMDM--VPHDSGAYVALSNMYASQG 491
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 51/283 (18%)
Query: 155 DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDAL----ELFRAMTKEGPRPNSFTLA 210
D+ A +IF+ + R+ +W +I G+ ++ D AL + M+ E PN FT
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESD-EDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF------ 264
++L ++ + GKQIH A++ V + L+ MY G + +A+ +F
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 265 --------------NLICWN------------------------NDTVSWSSMIIALAQH 286
++ WN VSW++MI + +
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 287 GLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSH 346
G ++A+E+F +M I P+++T V VL A + +G +E G + +L A I
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVL 311
Query: 347 YACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
+ +ID+Y + G++++A E +P E +VI W ++++ ++
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIH 353
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/587 (40%), Positives = 359/587 (61%), Gaps = 37/587 (6%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALE 57
++ + SWN M++ + GR + A+ F++M E D+VTW++ I+GY Q G EAL
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 58 LFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMY 117
+ ML S +KP++ TL S LS C ++ + GK+IH Y I+ D+
Sbjct: 352 VCRQMLS-SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL------------ 398
Query: 118 AKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL--RNRDVVAWT 175
+ G V+ Q L+D YAK + AR +FDSL + RDVV WT
Sbjct: 399 -RKNGHGDENMVINQ-------------LIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEG--PRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
MI GY Q+G + ALEL M +E RPN+FT++ L + A+L GKQIHA A+
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 234 RSRED-LSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEA 292
R++++ + + V N LI MYAK GSI +A+ VF+ + N+ V+W+S++ HG GEEA
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHGYGEEA 563
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMID 352
+ +F++M +G + D +T + VL AC+H G+++QG YFN M +V + P HYAC++D
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVD 623
Query: 353 LYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGA 412
L GRAG L A + IE MP+EP + W + LS C+++ V+L + AAE++ + ++ G+
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGS 683
Query: 413 YSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEI 472
Y+ L+N+Y+ G+W+D +IR LM +GVKK G SW+E F D HP EI
Sbjct: 684 YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEI 743
Query: 473 YKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRI 532
Y+++ + IK +G++P+T LHD++ E KD LL HSEKLA+A+GI++TP+ +RI
Sbjct: 744 YQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRI 803
Query: 533 MKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
KNLR+C DCHTA ++S+++ +II+RD +RFHHFK+G CSC+ YW
Sbjct: 804 TKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 202/390 (51%), Gaps = 17/390 (4%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++++ + A F +MS D+V+WNS+I Y + G K ALE+FS M +
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+PD TL + L C +L +LGKQ+H + + +E + V N L+ MYAK G ++ A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQN 184
V S +S D +++ A++ GY+++G A ++F+ ++ DVV W+A I GY Q
Sbjct: 286 VF--SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS-- 242
GL +AL + R M G +PN TL ++LS + +L HGK+IH AI+ DL +
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGH 403
Query: 243 -----VGNALITMYAKAGSIDNAQKVFN-LICWNNDTVSWSSMIIALAQHGLGEEAIELF 296
V N LI MYAK +D A+ +F+ L D V+W+ MI +QHG +A+EL
Sbjct: 404 GDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 297 EKMLA--LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLY 354
+M P+ T L AC + + G+ + L C+ID+Y
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523
Query: 355 GRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
+ G + +A +NM + + + W SL++
Sbjct: 524 AKCGSISDARLVFDNM-MAKNEVTWTSLMT 552
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 260/606 (42%), Gaps = 142/606 (23%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERD--IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
+IS +++ G + A++ ++ D + WNS+I Y +G + L LF ++ S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG-LMHSLSW 123
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD +T AC + ++ G+ H+ + T F + V NAL++MY++ + AR+
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V + E+S D +++ ++++ YAKLG
Sbjct: 184 VFD--EMSVWDVVSWNSIIESYAKLGK-------------------------------PK 210
Query: 189 DALELFRAMTKE-GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
ALE+F MT E G RP++ TL +L + + + GKQ+H A+ S ++ VGN L
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 248 ITMYAKAGSIDNAQKVF------NLICWNN----------------------------DT 273
+ MYAK G +D A VF +++ WN D
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 274 VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSY--- 330
V+WS+ I AQ GLG EA+ + +ML+ GI+P+ +T + VLS C VG + G+
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 331 -----FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM-PIEPDVIAWGSLLS 384
+L + H E + + +ID+Y + + A +++ P E DV+ W ++
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 385 S---------------------CKVYKN--------VDLAKIAAERL-------LLIEPD 408
C+ N V A +AA R+ L
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 409 NSGAY---SALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSL 465
N+ + L ++Y+ CG DA R + ++ K E + L +H +G E++L
Sbjct: 509 NAVPLFVSNCLIDMYAKCGSISDA---RLVFDNMMAKNEVTWTSLMTGYGMHGYG-EEAL 564
Query: 466 HPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDL----EIEVKDKLLRYHSEKLAIAFGI 521
I++E++++GF D ++L L + D+ + Y + ++ FG+
Sbjct: 565 ------------GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN-RMKTVFGV 611
Query: 522 ISTPEN 527
PE+
Sbjct: 612 SPGPEH 617
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/571 (39%), Positives = 355/571 (62%), Gaps = 35/571 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
+++I ++ G++D A + + +D+V+W +MIAGY Q+ FD +AL F ML D +
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML-DRGI 587
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ D+ L + +SAC L+ + G+QIH+ + F QNAL+++Y++ G +
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI----- 642
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
E+S ++ F+ D +AW A++ G+ Q+G N+
Sbjct: 643 --EESYLA--------------------------FEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+AL +F M +EG N+FT + + +S A++ GKQ+HA ++ D V NALI
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 734
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+MYAK GSI +A+K F + N+ VSW+++I A ++HG G EA++ F++M+ + P+H
Sbjct: 735 SMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+T VGVLSAC+H+GLV++G +YF M S + + P HY C++D+ RAGLL A +FI+
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
MPI+PD + W +LLS+C V+KN+++ + AA LL +EP++S Y L+N+Y+ KW+
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 913
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
R+ M ++GVKKE G SW+E++N +H F D HP DEI++ + + ++G+
Sbjct: 914 RDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
Query: 489 IPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKF 548
+ D S+L++L+ E KD ++ HSEKLAI+FG++S P + +MKNLR+CNDCH IKF
Sbjct: 974 VQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKF 1033
Query: 549 ISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+SK+ REIIVRD RFHHF+ G CSC+DYW
Sbjct: 1034 VSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 184/379 (48%), Gaps = 43/379 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++SL+ + G + A F MS+RD VT+N++I G +Q G+ ++A+ELF M D L
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GL 385
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+PD TLAS + AC+ + G+Q+H+Y + F + ++ AL+++YAK +E A
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
++E+ +VV W M+V Y GL D
Sbjct: 446 YFLETEV---------------------------------ENVVLWNVMLVAY---GLLD 469
Query: 189 D---ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
D + +FR M E PN +T ++L R L G+QIH+ I++ L+ V +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
LI MYAK G +D A + D VSW++MI Q+ ++A+ F +ML GI
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
D + +SAC + +++G+ + A V L ++ LY R G ++E++
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 366 FIENMPIEPDVIAWGSLLS 384
E D IAW +L+S
Sbjct: 648 AFEQTE-AGDNIAWNALVS 665
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 174/377 (46%), Gaps = 41/377 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+++L+ I+ AL F + ++V WN M+ Y + + +F M Q + P
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVP 488
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+++T S L C L ++ LG+QIHS II+T F
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ-------------------------- 522
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
L+A + L+D YAKLG + A I +DVV+WT MI GY Q +D A
Sbjct: 523 -------LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L FR M G R + L +S + +L G+QIHA A S + NAL+T+
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y++ G I+ + F D ++W++++ Q G EEA+ +F +M GI+ ++ T
Sbjct: 636 YSRCGKIEESYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFT 694
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC--MIDLYGRAGLLQEAFKFIE 368
+ + A + ++QG+ + A + K C +I +Y + G + +A K
Sbjct: 695 FGSAVKAASETANMKQGK---QVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFL 751
Query: 369 NMPIEPDVIAWGSLLSS 385
+ + +V +W +++++
Sbjct: 752 EVSTKNEV-SWNAIINA 767
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 193/421 (45%), Gaps = 49/421 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I L+ +G +DLA F + +D +W +MI+G +++ + EA+ LF M +
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGI 284
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P + +S LSAC +E++ +G+Q+H +++ F V NAL+S+Y G + A
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ S +S DA+ + L++G + Q G +
Sbjct: 345 IF--SNMSQRDAVTYNTLINGLS-------------------------------QCGYGE 371
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
A+ELF+ M +G P+S TLA+++ S +L G+Q+HA + + + AL+
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+YAK I+ A F L + V W+ M++A + +F +M I P+
Sbjct: 432 NLYAKCADIETALDYF-LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC--MIDLYGRAGLLQEAFKF 366
TY +L C +G +E G + + + K L+ Y C +ID+Y + G L A+
Sbjct: 491 YTYPSILKTCIRLGDLELGE---QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL---IEPDNSGAYSALANVYSAC 423
+ DV++W ++++ Y N D + R +L I D G L N SAC
Sbjct: 548 LIRFA-GKDVVSWTTMIAGYTQY-NFDDKALTTFRQMLDRGIRSDEVG----LTNAVSAC 601
Query: 424 G 424
Sbjct: 602 A 602
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 204/457 (44%), Gaps = 70/457 (15%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+ ++ G + A F +M ER I TWN MI E LF M+ ++ + P
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN-VTP 184
Query: 71 DKFTLASTLSACTNLE-NMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
++ T + L AC ++ +QIH+ I+ S V N LI +Y++ G V++
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL---- 240
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
AR++FD LR +D +W AMI G +N +
Sbjct: 241 -----------------------------ARRVFDGLRLKDHSSWVAMISGLSKNECEAE 271
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
A+ LF M G P + +++LS + SL G+Q+H ++ V NAL++
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
+Y G++ +A+ +F+ + D V+++++I L+Q G GE+A+ELF++M G+EPD
Sbjct: 332 LYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 310 TYVGVLSACTHVGLVEQGR-------------------SYFNLMASVHKIEPTLSHYA-- 348
T ++ AC+ G + +G+ + NL A IE L ++
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 349 ---------CMIDLYGRAGLLQEAFKFIENMPIE---PDVIAWGSLLSSCKVYKNVDLAK 396
M+ YG L+ +F+ M IE P+ + S+L +C +++L +
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 397 IAAERLLLIEPD-NSGAYSALANVYSACGKWEDAAKI 432
+++ N+ S L ++Y+ GK + A I
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 21/235 (8%)
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFR--AMTKEGPRPNSFTLAAMLSVS 216
R +F +L ++ A+ V Y+ D++ + R ++ G RPN TL +L
Sbjct: 39 TRTVFPTLCGTRRASFAAISV-YISE---DESFQEKRIDSVENRGIRPNHQTLKWLLEGC 94
Query: 217 SR-GASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVS 275
+ SL+ G+++H+ ++ D + + L Y G + A KVF+ + +
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-ERTIFT 153
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA 335
W+ MI LA L E LF +M++ + P+ T+ GVL AC G F+++
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC------RGGSVAFDVVE 207
Query: 336 SVHK--IEPTL--SHYAC--MIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
+H + L S C +IDLY R G + A + + + ++ D +W +++S
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWVAMIS 261
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/575 (39%), Positives = 356/575 (61%), Gaps = 10/575 (1%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+ ++ + GRI+ A F +MS RD+VTWN+MI Y + G EA +LF M +DS++ P
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM-KDSNVMP 210
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D+ L + +SAC NM + I+ ++I + + + AL++MYA G +++AR
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+ + +L TA++ GY+K G + A+ IFD +D+V WT MI YV++ +A
Sbjct: 271 RKMSVRNL--FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L +F M G +P+ ++ +++S + L+ K +H+ + + +S+ NALI M
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK G +D + VF + N VSWSSMI AL+ HG +A+ LF +M +EP+ +T
Sbjct: 389 YAKCGGLDATRDVFEKMPRRN-VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+VGVL C+H GLVE+G+ F M + I P L HY CM+DL+GRA LL+EA + IE+M
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Query: 371 PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAA 430
P+ +V+ WGSL+S+C+++ ++L K AA+R+L +EPD+ GA ++N+Y+ +WED
Sbjct: 508 PVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVR 567
Query: 431 KIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIP 490
IR++M ++ V KE+G S ++ + H F D H Q +EIY +D++ ++K G++P
Sbjct: 568 NIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVP 627
Query: 491 DTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENT------TLRIMKNLRICNDCHT 544
D SVL D+E E K L+ +HSEKLA+ FG+++ + +RI+KNLR+C DCH
Sbjct: 628 DCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHL 687
Query: 545 AIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
K +SK+ REIIVRD TRFH +K+G CSCRDYW
Sbjct: 688 FFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
+R++ M+S + GR+D A F Q ++D+V W +MI+ Y + + +EAL +F
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M S +KPD ++ S +SAC NL ++ K +HS I + ++ NALI+MYAK G
Sbjct: 335 MCC-SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
G LDA R +F+ + R+VV+W++MI
Sbjct: 394 G---------------LDA------------------TRDVFEKMPRRNVVSWSSMINAL 420
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
+G DAL LF M +E PN T +L S + GK+I AS ++ +I
Sbjct: 421 SMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT---DEYNI 477
Query: 242 SVG----NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
+ ++ ++ +A + A +V + ++ V W S++ A H GE + F
Sbjct: 478 TPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIH--GELELGKFA 535
Query: 298 KMLALGIEPDH 308
L +EPDH
Sbjct: 536 AKRILELEPDH 546
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 184/387 (47%), Gaps = 16/387 (4%)
Query: 58 LFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMY 117
LF ++ + D+F+ L A + + + G ++H + V+ + MY
Sbjct: 97 LFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMY 156
Query: 118 AKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAM 177
A G + AR V + E+S D + + +++ Y + G + A ++F+ +++ +V+ +
Sbjct: 157 ASCGRINYARNVFD--EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 178 IVGYVQNGLNDDALELFRA----MTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ V + RA + + R ++ L A++++ + ++ ++
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF----F 270
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAI 293
R ++ V A+++ Y+K G +D+AQ +F+ D V W++MI A + +EA+
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT-EKKDLVCWTTMISAYVESDYPQEAL 329
Query: 294 ELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDL 353
+FE+M GI+PD ++ V+SAC ++G++++ + + + V+ +E LS +I++
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK-WVHSCIHVNGLESELSINNALINM 388
Query: 354 YGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVD--LAKIAAERLLLIEPDNSG 411
Y + G L E MP +V++W S++++ ++ L+ A + +EP N
Sbjct: 389 YAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP-NEV 446
Query: 412 AYSALANVYSACGKWEDAAKIRKLMND 438
+ + S G E+ KI M D
Sbjct: 447 TFVGVLYGCSHSGLVEEGKKIFASMTD 473
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 74/332 (22%)
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
G R + F+ +L S+ ++L G ++H A + V + MYA G I+ A
Sbjct: 106 GGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYA 165
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
+ VF+ + + D V+W++MI + GL +EA +LFE+M + PD + ++SAC
Sbjct: 166 RNVFDEMS-HRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 321 VGLVEQGRSYFNLM------ASVHKIEPTLSHYA------------------------CM 350
G + R+ + + H + ++ YA M
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 284
Query: 351 IDLYGRAGLL-------------------------------QEAFKFIENM---PIEPDV 376
+ Y + G L QEA + E M I+PDV
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 377 IAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSACGKWEDAAKIRK 434
++ S++S+C +D AK + + +E + S +AL N+Y+ CG + + +
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELS-INNALINMYAKCGGLDATRDVFE 403
Query: 435 LMNDRGVKKEQGSSWLEIQNEVHIFG-AEDSL 465
M R V SW + N + + G A D+L
Sbjct: 404 KMPRRNV-----VSWSSMINALSMHGEASDAL 430
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 123/277 (44%), Gaps = 39/277 (14%)
Query: 202 PRPNSFTLA-AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
P P + T A +L S SLNH KQ+HA +R+ + ++ +++ + + ++ A
Sbjct: 4 PPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYA 63
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
VF+ I +++ ++ + L++ I ++++ +G D +++ +L A +
Sbjct: 64 LNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSK 123
Query: 321 VGLVEQG-------------------RSYFNLMASVHKIE------PTLSH-----YACM 350
V + +G + ++ AS +I +SH + M
Sbjct: 124 VSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTM 183
Query: 351 IDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEP 407
I+ Y R GL+ EAFK E M + PD + +++S+C N+ + E LIE
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE--FLIEN 241
Query: 408 D---NSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
D ++ +AL +Y+ G + A + + M+ R +
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNL 278
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/563 (40%), Positives = 351/563 (62%), Gaps = 36/563 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++++ G ++ A F++M +RD VTW ++I+GY+QH +AL F+ ML+
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR-FGY 157
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P++FTL+S + A G Q+H + ++ FD V V
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD----------------SNVHVG-- 199
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ALLD Y + G + A+ +FD+L +R+ V+W A+I G+ + +
Sbjct: 200 ---------------SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
ALELF+ M ++G RP+ F+ A++ S L GK +HA I+S E L GN L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MYAK+GSI +A+K+F+ + D VSW+S++ A AQHG G+EA+ FE+M +GI P+
Sbjct: 305 DMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
I+++ VL+AC+H GL+++G Y+ LM I P HY ++DL GRAG L A +FIE
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
MPIEP W +LL++C+++KN +L AAE + ++PD+ G + L N+Y++ G+W D
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWND 482
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
AA++RK M + GVKKE SW+EI+N +H+F A D HPQ++EI + +++ +IK+LG+
Sbjct: 483 AARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGY 542
Query: 489 IPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKF 548
+PDT V+ ++ + ++ L+YHSEK+A+AF +++TP +T+ I KN+R+C DCHTAIK
Sbjct: 543 VPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKL 602
Query: 549 ISKLMGREIIVRDVTRFHHFKDG 571
SK++GREIIVRD RFHHFKD
Sbjct: 603 ASKVVGREIIVRDTNRFHHFKDA 625
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 167/332 (50%), Gaps = 40/332 (12%)
Query: 56 LELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALIS 115
L S+ L+ S + D+ + L CT + + G+ +H++I+++ F + N L++
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 116 MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWT 175
MYA K G + AR++F+ + RD V WT
Sbjct: 104 MYA---------------------------------KCGSLEEARKVFEKMPQRDFVTWT 130
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+I GY Q+ DAL F M + G PN FTL++++ ++ G Q+H ++
Sbjct: 131 TLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 190
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIEL 295
D ++ VG+AL+ +Y + G +D+AQ VF+ + ND VSW+++I A+ E+A+EL
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIAGHARRSGTEKALEL 249
Query: 296 FEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA--CMIDL 353
F+ ML G P H +Y + AC+ G +EQG+ M K L +A ++D+
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI---KSGEKLVAFAGNTLLDM 306
Query: 354 YGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
Y ++G + +A K + + + DV++W SLL++
Sbjct: 307 YAKSGSIHDARKIFDRLA-KRDVVSWNSLLTA 337
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/566 (38%), Positives = 347/566 (61%), Gaps = 39/566 (6%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQH-GFDKEALELFSSMLQDSSLKPDKFTLAS 77
G +D F +M + +++W ++I GY ++ EA+ LFS M+ ++P+ FT +S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 78 TLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISD 137
AC NL + +GKQ+ + + +V N++ISM+ K+ +E A+R
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRA-------- 430
Query: 138 LDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM 197
F+SL +++V++ + G +N + A +L +
Sbjct: 431 -------------------------FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 198 TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
T+ ++FT A++LS + S+ G+QIH+ ++ + V NALI+MY+K GSI
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
D A +VFN + N + +SW+SMI A+HG +E F +M+ G++P+ +TYV +LSA
Sbjct: 526 DTASRVFNFM-ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 318 CTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVI 377
C+HVGLV +G +FN M HKI+P + HYACM+DL RAGLL +AF+FI MP + DV+
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVL 644
Query: 378 AWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMN 437
W + L +C+V+ N +L K+AA ++L ++P+ AY L+N+Y+ GKWE++ ++R+ M
Sbjct: 645 VWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMK 704
Query: 438 DRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLH 497
+R + KE G SW+E+ +++H F D+ HP +IY +D++ EIK+ G++PDTD VLH
Sbjct: 705 ERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLH 764
Query: 498 DL----EIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLM 553
L + K++LL HSEK+A+AFG+IST ++ +R+ KNLR+C DCH A+K+IS +
Sbjct: 765 KLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVS 824
Query: 554 GREIIVRDVTRFHHFKDGFCSCRDYW 579
GREI++RD+ RFHHFKDG CSC DYW
Sbjct: 825 GREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 218/477 (45%), Gaps = 79/477 (16%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQM---SERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+N +ISL+ SG A F+ M +RD+V+W++M+A Y +G + +A+++F L+
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRT-EFDISGAVQNALISMYAKTGGV 123
L P+ + + + AC+N + + +G+ ++++T F+ V +LI M+ K
Sbjct: 160 -LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG--- 215
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
E S A ++FD + +VV WT MI +Q
Sbjct: 216 -------ENS----------------------FENAYKVFDKMSELNVVTWTLMITRCMQ 246
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
G +A+ F M G + FTL+++ S + +L+ GKQ+H+ AIRS L V
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS--GLVDDV 304
Query: 244 GNALITMYAKA---GSIDNAQKVFNLICWNNDTVSWSSMIIALAQH-GLGEEAIELFEKM 299
+L+ MYAK GS+D+ +KVF+ + ++ +SW+++I ++ L EAI LF +M
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Query: 300 LALG-IEPDHITYVGVLSAC-----THVGLVEQGRSYFNLMASVHKI------------- 340
+ G +EP+H T+ AC VG G+++ +AS +
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 341 ------------EPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSS 385
E L Y +D R ++AFK + + + + SLLS
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 386 CKVYKNVDLA-KIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
++ +I ++ + L N +AL ++YS CG + A+++ M +R V
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 168/380 (44%), Gaps = 56/380 (14%)
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M +D D T +S L +C + LGK +H+ +I EFDI
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI--EFDI---------------- 93
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR---NRDVVAWTAMI 178
+ D++ + +L+ Y+K GD A +F+++R RDVV+W+AM+
Sbjct: 94 ---------------EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE- 237
Y NG DA+++F + G PN + A++ S + G+ +++
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 238 DLSISVGNALITMYAKA-GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELF 296
+ + VG +LI M+ K S +NA KVF+ + N V+W+ MI Q G EAI F
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN-VVTWTLMITRCMQMGFPREAIRFF 257
Query: 297 EKMLALGIEPDHITYVGVLSACT---HVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDL 353
M+ G E D T V SAC ++ L +Q S+ V +E +L +D+
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSL------VDM 311
Query: 354 YGRA---GLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERL--LLIEPD 408
Y + G + + K + M + V++W +L++ KN +LA A ++ +
Sbjct: 312 YAKCSADGSVDDCRKVFDRME-DHSVMSWTALITG--YMKNCNLATEAINLFSEMITQGH 368
Query: 409 NSGAYSALANVYSACGKWED 428
+ ++ + ACG D
Sbjct: 369 VEPNHFTFSSAFKACGNLSD 388
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 133/277 (48%), Gaps = 12/277 (4%)
Query: 165 SLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRP-NSFTLAAMLSVSSRGASLN 223
S+ NR VA +I+ ++ G A+ M ++G RP +S T +++L R
Sbjct: 21 SVSNRINVA-DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFR 79
Query: 224 HGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI--CWNNDTVSWSSMII 281
GK +HA I + + N+LI++Y+K+G A+ VF + D VSWS+M+
Sbjct: 80 LGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMA 139
Query: 282 ALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIE 341
+G +AI++F + L LG+ P+ Y V+ AC++ V GR + E
Sbjct: 140 CYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFE 199
Query: 342 PTLSHYACMIDLYGRA-GLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAE 400
+ +ID++ + + A+K + M E +V+ W +++ C + + A
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIR 255
Query: 401 RLL--LIEPDNSGAYSALANVYSACGKWEDAAKIRKL 435
L ++ S ++ L++V+SAC + E+ + ++L
Sbjct: 256 FFLDMVLSGFESDKFT-LSSVFSACAELENLSLGKQL 291
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS++ G ID A F M R++++W SMI G+ +HGF LE F+ M+++ +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE-GV 571
Query: 69 KPDKFTLASTLSACTNL 85
KP++ T + LSAC+++
Sbjct: 572 KPNEVTYVAILSACSHV 588
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/563 (41%), Positives = 351/563 (62%), Gaps = 10/563 (1%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAST 78
G+I +LA F Q + D+ + + I + +G +A L+ +L S + P++FT +S
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL-SSEINPNEFTFSSL 136
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
L +C+ GK IH+++++ I V L+ +YAK G V A++V ++ + +
Sbjct: 137 LKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR--MPER 190
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
++ TA++ YAK G++ AR +FDS+ RD+V+W MI GY Q+G +DAL LF+ +
Sbjct: 191 SLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLL 250
Query: 199 KEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
EG P+P+ T+ A LS S+ +L G+ IH SR L++ V LI MY+K GS+
Sbjct: 251 AEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSL 310
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL-GIEPDHITYVGVLS 316
+ A VFN D V+W++MI A HG ++A+ LF +M + G++P IT++G L
Sbjct: 311 EEAVLVFN-DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 317 ACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDV 376
AC H GLV +G F M + I+P + HY C++ L GRAG L+ A++ I+NM ++ D
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 377 IAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLM 436
+ W S+L SCK++ + L K AE L+ + NSG Y L+N+Y++ G +E AK+R LM
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
Query: 437 NDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVL 496
++G+ KE G S +EI+N+VH F A D H + EIY M+ KI E IK G++P+T++VL
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549
Query: 497 HDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGRE 556
DLE K++ L+ HSE+LAIA+G+IST + L+I KNLR+C+DCHT K ISK+ GR+
Sbjct: 550 QDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRK 609
Query: 557 IIVRDVTRFHHFKDGFCSCRDYW 579
I++RD RFHHF DG CSC D+W
Sbjct: 610 IVMRDRNRFHHFTDGSCSCGDFW 632
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 153/338 (45%), Gaps = 44/338 (13%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
RS+ S MI+ + G ++ A A F M ERDIV+WN MI GY QHGF +AL LF +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
L + KPD+ T+ + LSAC+ + + G+ IH ++ + ++ V LI MY+K G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E A V + D+ +A+ A++ GYA
Sbjct: 310 LEEAVLVFNDTPRKDI--VAWNAMIAGYA------------------------------- 336
Query: 183 QNGLNDDALELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS-----AIRSR 236
+G + DAL LF M G +P T L + +N G +I S I+ +
Sbjct: 337 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELF 296
I L+++ +AG + A + + + D+V WSS++ + HG E+
Sbjct: 397 ----IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIA 452
Query: 297 EKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
E ++ L I+ I YV + + VG E NLM
Sbjct: 453 EYLIGLNIKNSGI-YVLLSNIYASVGDYEGVAKVRNLM 489
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/555 (40%), Positives = 345/555 (62%), Gaps = 41/555 (7%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F+ M +D+V++N++IAGY Q G ++AL + M + LKPD FTL+S L + +
Sbjct: 163 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVD 221
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+ GK+IH Y+IR G+ D D ++L+
Sbjct: 222 VIKGKEIHGYVIRK--------------------GI-------------DSDVYIGSSLV 248
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
D YAK I + ++F L RD ++W +++ GYVQNG ++AL LFR M +P +
Sbjct: 249 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 308
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF--- 264
++++ + A+L+ GKQ+H +R +I + +AL+ MY+K G+I A+K+F
Sbjct: 309 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 368
Query: 265 NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLV 324
N++ D VSW+++I+ A HG G EA+ LFE+M G++P+ + +V VL+AC+HVGLV
Sbjct: 369 NVL----DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 424
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
++ YFN M V+ + L HYA + DL GRAG L+EA+ FI M +EP W +LLS
Sbjct: 425 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 484
Query: 385 SCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
SC V+KN++LA+ AE++ ++ +N GAY + N+Y++ G+W++ AK+R M +G++K+
Sbjct: 485 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 544
Query: 445 QGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVK 504
SW+E++N+ H F + D HP D+I + + + E+++K G++ DT VLHD++ E K
Sbjct: 545 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 604
Query: 505 DKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTR 564
+LL HSE+LA+AFGII+T TT+R+ KN+RIC DCH AIKFISK+ REIIVRD +R
Sbjct: 605 RELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSR 664
Query: 565 FHHFKDGFCSCRDYW 579
FHHF G CSC DYW
Sbjct: 665 FHHFNRGNCSCGDYW 679
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 191/380 (50%), Gaps = 37/380 (9%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
S TS +I+IS++ N + AL F+ + ++ W S+I + +AL F M
Sbjct: 38 SHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEM- 96
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+ S PD S L +CT + ++ G+ +H +I+R D NAL++MYAK G+
Sbjct: 97 RASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGM 156
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
+ RRV E + P +DVV++ +I GY Q
Sbjct: 157 DSVRRVFE------------------------VMP---------RKDVVSYNTIIAGYAQ 183
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
+G+ +DAL + R M +P+SFTL+++L + S + GK+IH IR D + +
Sbjct: 184 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 243
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
G++L+ MYAK+ I+++++VF+ + + D +SW+S++ Q+G EA+ LF +M+
Sbjct: 244 GSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK 302
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
++P + + V+ AC H+ + G+ + + + ++D+Y + G ++ A
Sbjct: 303 VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGNIKAA 361
Query: 364 FKFIENMPIEPDVIAWGSLL 383
K + M + D ++W +++
Sbjct: 362 RKIFDRMNV-LDEVSWTAII 380
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 115/193 (59%), Gaps = 7/193 (3%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ S RI+ + F ++ RD ++WNS++AGY Q+G EAL LF M+ + +KP
Sbjct: 247 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKP 305
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+S + AC +L ++LGKQ+H Y++R F + + +AL+ MY+K G ++ AR++
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 365
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VAWTAMIVGYVQNGL 186
++ + LD +++TA++ G+A G A +F+ ++ + V VA+ A++ GL
Sbjct: 366 DRMNV--LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 423
Query: 187 NDDALELFRAMTK 199
D+A F +MTK
Sbjct: 424 VDEAWGYFNSMTK 436
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 156/363 (42%), Gaps = 51/363 (14%)
Query: 163 FDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASL 222
F +L++ V+AW ++I + L AL F M G P+ ++L + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 223 NHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIA 282
G+ +H +R D + GNAL+ MYAK +D+ ++VF ++ D VS++++I
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMP-RKDVVSYNTIIAG 180
Query: 283 LAQHGLGEEAIELFEKMLALGIEPDHIT----------YVGVLSACTHVGLVEQ------ 326
AQ G+ E+A+ + +M ++PD T YV V+ G V +
Sbjct: 181 YAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD 240
Query: 327 ---GRSYFNLMASVHKIEPT---LSHYAC--------MIDLYGRAGLLQEAFKFIENM-- 370
G S ++ A +IE + S C ++ Y + G EA + M
Sbjct: 241 VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT 300
Query: 371 -PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE-PDNSGAYSALANVYSACGKWED 428
++P +A+ S++ +C + L K +L N SAL ++YS CG +
Sbjct: 301 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKA 360
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
A KI MN V E SW I I G +LH E + +EE+K+ G
Sbjct: 361 ARKIFDRMN---VLDE--VSWTAI-----IMG--HALHGHGHEAVSL----FEEMKRQGV 404
Query: 489 IPD 491
P+
Sbjct: 405 KPN 407
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/579 (40%), Positives = 354/579 (61%), Gaps = 37/579 (6%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + S+ +I + + G I+ A F ++ +D+V+WN+MI+GY + G KEALELF M
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ ++++PD+ T+ + +SAC ++ LG+Q+H +I F + + NALI
Sbjct: 258 MK-TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI-------- 308
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
D Y+K G++ A +F+ L +DV++W +I GY
Sbjct: 309 -------------------------DLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS-- 240
L +AL LF+ M + G PN T+ ++L + +++ G+ IH + + ++
Sbjct: 344 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
S+ +LI MYAK G I+ A +VFN I + SW++MI A HG + + +LF +M
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
+GI+PD IT+VG+LSAC+H G+++ GR F M +K+ P L HY CMIDL G +GL
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 361 QEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVY 420
+EA + I M +EPD + W SLL +CK++ NV+L + AE L+ IEP+N G+Y L+N+Y
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 421 SACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIW 480
++ G+W + AK R L+ND+G+KK G S +EI + VH F D HP+ EIY M++++
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 642
Query: 481 EEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICN 540
++K GF+PDT VL ++E E K+ LR+HSEKLAIAFG+IST T L I+KNLR+C
Sbjct: 643 VLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCR 702
Query: 541 DCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+CH A K ISK+ REII RD TRFHHF+DG CSC DYW
Sbjct: 703 NCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 211/411 (51%), Gaps = 39/411 (9%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
+ A++ F+ + E +++ WN+M G+ AL+L+ M+ L P+ +T L
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS-LGLLPNSYTFPFVLK 142
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
+C + G+QIH ++++ D+ V +LISMY + G +E A +V ++S D
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS--PHRDV 200
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
+++TAL+ GYA G I A+++FD + +DVV+W AMI GY + G +ALELF+ M K
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
RP+ T+ ++S ++ S+ G+Q+H ++ + NALI +Y+K G ++ A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
+F + + D +SW+++I L +EA+ LF++ML G P+ +T + +L AC H
Sbjct: 321 CGLFERLPY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 321 VGLVEQGR---------------------SYFNLMASVHKIEP-----------TLSHYA 348
+G ++ GR S ++ A IE +LS +
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 349 CMI---DLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAK 396
MI ++GRA + F + + I+PD I + LLS+C +DL +
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/576 (39%), Positives = 355/576 (61%), Gaps = 37/576 (6%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+T N++I+ + G ++LA F M ER +V+WN+MI Y ++ + EAL++F M +
Sbjct: 88 VTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM-R 146
Query: 65 DSSLKPDKFTLASTLSAC-TNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+ K +FT++S LSAC N + + K++H ++T
Sbjct: 147 NEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSVKT---------------------- 183
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
DL+ TALLD YAK G I A Q+F+S++++ V W++M+ GYVQ
Sbjct: 184 -----------CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ 232
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
N ++AL L+R + N FTL++++ S A+L GKQ+HA +S ++ V
Sbjct: 233 NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 292
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
++ + MYAK GS+ + +F+ + N + W+++I A+H +E + LFEKM G
Sbjct: 293 ASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTIISGFAKHARPKEVMILFEKMQQDG 351
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
+ P+ +T+ +LS C H GLVE+GR +F LM + + + P + HY+CM+D+ GRAGLL EA
Sbjct: 352 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 411
Query: 364 FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
++ I+++P +P WGSLL+SC+VYKN++LA++AAE+L +EP+N+G + L+N+Y+A
Sbjct: 412 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 471
Query: 424 GKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEI 483
+WE+ AK RKL+ D VKK +G SW++I+++VH F +S HP+ EI +D + +
Sbjct: 472 KQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF 531
Query: 484 KKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCH 543
+K G+ P + LHD+EI K++LL HSEKLA+ FG++ PE++ +RIMKNLRIC DCH
Sbjct: 532 RKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCH 591
Query: 544 TAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+K S R IIVRDV RFHHF DG CSC D+W
Sbjct: 592 EFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 627
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 212 MLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN 271
+L + +R ++ K H IR + +++ N LI Y+K G ++ A++VF+ +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM-LER 117
Query: 272 DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC-THVGLVEQGRSY 330
VSW++MI ++ + EA+++F +M G + T VLSAC + +E +
Sbjct: 118 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK-- 175
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
+ ++ I+ L ++DLY + G++++A + E+M + + W S+++ K
Sbjct: 176 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNK 234
Query: 391 NVDLAKIAAER 401
N + A + R
Sbjct: 235 NYEEALLLYRR 245
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/581 (38%), Positives = 354/581 (60%), Gaps = 46/581 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ N ++ F M +R I WN+MIAGY+Q+ DKEAL LF M + + L
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ T+A + AC + + IH ++++ D VQN L+ MY++ G +++A R
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR-- 461
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
IF + +RD+V W MI GYV + ++DA
Sbjct: 462 -------------------------------IFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 191 LELFRAM-----------TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
L L M ++ +PNS TL +L + ++L GK+IHA AI++
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
++VG+AL+ MYAK G + ++KVF+ I N ++W+ +I+A HG G+EAI+L M
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN-VITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
+ G++P+ +T++ V +AC+H G+V++G F +M + +EP+ HYAC++DL GRAG
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 360 LQEAFKFIENMPIEPDVI-AWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALAN 418
++EA++ + MP + + AW SLL + +++ N+++ +IAA+ L+ +EP+ + Y LAN
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 419 VYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDK 478
+YS+ G W+ A ++R+ M ++GV+KE G SW+E +EVH F A DS HPQ +++ ++
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 789
Query: 479 IWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRI 538
+WE ++K G++PDT VLH++E + K+ LL HSEKLAIAFGI++T T +R+ KNLR+
Sbjct: 790 LWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRV 849
Query: 539 CNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
CNDCH A KFISK++ REII+RDV RFH FK+G CSC DYW
Sbjct: 850 CNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 217/451 (48%), Gaps = 56/451 (12%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++++ G++ + RD+VTWN++++ Q+ EALE M+ + +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-V 298
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRT-EFDISGAVQNALISMYAKTGGVEVAR 127
+PD+FT++S L AC++LE + GK++H+Y ++ D + V +AL+ MY V R
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
RV FD + +R + W AMI GY QN +
Sbjct: 359 RV---------------------------------FDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 188 DDALELFRAMTKE-GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+AL LF M + G NS T+A ++ R + + + IH ++ D V N
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL---- 302
L+ MY++ G ID A ++F + + D V+W++MI E+A+ L KM L
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 303 -------GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYG 355
++P+ IT + +L +C + + +G+ + A + + ++ + ++D+Y
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYA 563
Query: 356 RAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSA 415
+ G LQ + K + +P + +VI W ++ + ++ N A I R+++++ +
Sbjct: 564 KCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEA-IDLLRMMMVQGVKPNEVTF 621
Query: 416 LANVYSAC---GKWEDAAKIRKLMN-DRGVK 442
++ V++AC G ++ +I +M D GV+
Sbjct: 622 IS-VFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 188/386 (48%), Gaps = 43/386 (11%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
S+T N +++L+ G F ++SER+ V+WNS+I+ + ALE F ML
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 64 QDSSLKPDKFTLASTLSACTNL---ENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
D +++P FTL S ++AC+NL E + +GKQ+H+Y +R + +++ + N L++MY K
Sbjct: 192 -DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGK- 248
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
LG + ++ + S RD+V W ++
Sbjct: 249 --------------------------------LGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DL 239
QN +ALE R M EG P+ FT++++L S L GK++HA A+++ D
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
+ VG+AL+ MY + + ++VF+ + ++ W++MI +Q+ +EA+ LF M
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 300 -LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG 358
+ G+ + T GV+ AC G + + + ++ ++D+Y R G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQNTLMDMYSRLG 454
Query: 359 LLQEAFKFIENMPIEPDVIAWGSLLS 384
+ A + M + D++ W ++++
Sbjct: 455 KIDIAMRIFGKME-DRDLVTWNTMIT 479
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 165/381 (43%), Gaps = 96/381 (25%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM------ 62
N ++ ++ G+ID+A+ F +M +RD+VTWN+MI GY ++AL L M
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 63 ----LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
SLKP+ TL + L +C L + GK+IH+Y I+ AV +AL+ MYA
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 119 KTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMI 178
K G ++++R+V FD + ++V+ W +I
Sbjct: 564 KCGCLQMSRKV---------------------------------FDQIPQKNVITWNVII 590
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRED 238
+ Y +G +A++L R M +G +PN T ++ + S ++ G +I + D
Sbjct: 591 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVM---KPD 647
Query: 239 LSISVGN----ALITMYAKAGSIDNAQKVFNLICWN-NDTVSWSSMIIALAQHG---LGE 290
+ + ++ + +AG I A ++ N++ + N +WSS++ A H +GE
Sbjct: 648 YGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGE 707
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTL-SHYAC 349
A + NL+ ++EP + SHY
Sbjct: 708 IAAQ-------------------------------------NLI----QLEPNVASHYVL 726
Query: 350 MIDLYGRAGLLQEAFKFIENM 370
+ ++Y AGL +A + NM
Sbjct: 727 LANIYSSAGLWDKATEVRRNM 747
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 39/265 (14%)
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDI-SGAVQNALISMYAKTGGVEVA 126
+KPD + + L A +L++M LGKQIH+++ + + + S V N L+++Y K
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC------ 146
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
GD ++FD + R+ V+W ++I
Sbjct: 147 ---------------------------GDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSR---GASLNHGKQIHASAIRSREDLSISV 243
+ ALE FR M E P+SFTL ++++ S L GKQ+HA +R E L+ +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFI 238
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
N L+ MY K G + +++ + D V+W++++ +L Q+ EA+E +M+ G
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSF-GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 304 IEPDHITYVGVLSACTHVGLVEQGR 328
+EPD T VL AC+H+ ++ G+
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGK 322
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 21/281 (7%)
Query: 156 ITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSV 215
++ A IF S ++R W ++ V++ L +A+ + M G +P+++ A+L
Sbjct: 48 VSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 216 SSRGASLNHGKQIHASAIRSREDL-SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTV 274
+ + GKQIHA + + S++V N L+ +Y K G KVF+ I N V
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ-V 165
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE------QGR 328
SW+S+I +L E A+E F ML +EP T V V++AC+++ + E Q
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225
Query: 329 SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS-CK 387
+Y + K E ++ +YG+ G L + + + D++ W ++LSS C+
Sbjct: 226 AY-----GLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQ 279
Query: 388 VYKNVDLAKIAAERLLL-IEPDNSGAYSALANVYSACGKWE 427
+ ++ + E +L +EPD +++V AC E
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDE----FTISSVLPACSHLE 316
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/575 (38%), Positives = 349/575 (60%), Gaps = 38/575 (6%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML-----QD 65
+I ++ G+++ A F ++ +R+IV+W SMI GY+ +G +A+ LF +L D
Sbjct: 117 LIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDD 176
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
++ D L S +SAC+ + L + IHS++I+ FD +V N L+ YAK G
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE--- 233
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
G + AR+IFD + ++D V++ +++ Y Q+G
Sbjct: 234 ----------------------------GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 186 LNDDALELFRAMTKEGPRP-NSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
++++A E+FR + K N+ TL+ +L S +L GK IH IR + + VG
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
++I MY K G ++ A+K F+ + N + SW++MI HG +A+ELF M+ G+
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRM-KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
P++IT+V VL+AC+H GL +G +FN M +EP L HY CM+DL GRAG LQ+A+
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
I+ M ++PD I W SLL++C+++KNV+LA+I+ RL ++ N G Y L+++Y+ G
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 425 KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
+W+D ++R +M +RG+ K G S LE+ EVH+F D HPQ+++IY+ + ++ ++
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 485 KLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHT 544
+ G++ +T SV HD++ E K+ LR HSEKLAIAFGI++T +T+ ++KNLR+C+DCH
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624
Query: 545 AIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
IK ISK++ RE +VRD RFHHFKDG CSC DYW
Sbjct: 625 VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 202/425 (47%), Gaps = 61/425 (14%)
Query: 29 QQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENM 88
+ + + D+ +WNS+IA + G EAL FSSM + SL P + + + AC++L ++
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM-RKLSLYPTRSSFPCAIKACSSLFDI 92
Query: 89 NLGKQIH--SYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTAL 146
GKQ H +++ + DI V +ALI MY+ G +E AR+V
Sbjct: 93 FSGKQTHQQAFVFGYQSDI--FVSSALIVMYSTCGKLEDARKV----------------- 133
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM------TKE 200
FD + R++V+WT+MI GY NG DA+ LF+ + +
Sbjct: 134 ----------------FDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDD 177
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA--GSID 258
+S L +++S SR + + IH+ I+ D +SVGN L+ YAK G +
Sbjct: 178 AMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP-DHITYVGVLSA 317
A+K+F+ I + D VS++S++ AQ G+ EA E+F +++ + + IT VL A
Sbjct: 238 VARKIFDQIV-DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLA 296
Query: 318 CTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVI 377
+H G + G+ + + + +E + +ID+Y + G ++ A K + M +V
Sbjct: 297 VSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVR 354
Query: 378 AWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG---------KWED 428
+W ++++ ++ + AK +I+ Y +V +AC +W +
Sbjct: 355 SWTAMIAGYGMHGHA--AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
Query: 429 AAKIR 433
A K R
Sbjct: 413 AMKGR 417
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 40/308 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQ--FQQMSERDIVTWNSMIAGYNQHGFDKEALELFS 60
R ++ N ++ + G +A+A+ F Q+ ++D V++NS+++ Y Q G EA E+F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
++++ + + TL++ L A ++ + +GK IH +IR + V ++I MY K
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G VE AR+ FD ++N++V +WTAMI G
Sbjct: 336 GRVETARKA---------------------------------FDRMKNKNVRSWTAMIAG 362
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR-GASLNHGKQIHASAIRSREDL 239
Y +G ALELF AM G RPN T ++L+ S G + + +A R +
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEP 422
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
+ ++ + +AG + A + + D++ WSS++ A H + +EL E
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH----KNVELAEIS 478
Query: 300 LALGIEPD 307
+A E D
Sbjct: 479 VARLFELD 486
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 144/331 (43%), Gaps = 49/331 (14%)
Query: 160 RQIFDSLRNR-----DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
RQ +L NR DV +W ++I ++G + +AL F +M K P + +
Sbjct: 25 RQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIK 84
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTV 274
S + GKQ H A I V +ALI MY+ G +++A+KVF+ I N V
Sbjct: 85 ACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN-IV 143
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY------VGVLSACTHV---GLVE 325
SW+SMI +G +A+ LF+ +L + D + V V+SAC+ V GL E
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 326 QGRSY-----FNLMASVHK------------------------IEPTLSHYACMIDLYGR 356
S+ F+ SV ++ Y ++ +Y +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 357 AGLLQEAF----KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE-PDNSG 411
+G+ EAF + ++N + + I ++L + + + K ++++ + D+
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 412 AYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
+++ ++Y CG+ E A K M ++ V+
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVR 354
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 447 bits (1150), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/634 (37%), Positives = 376/634 (59%), Gaps = 62/634 (9%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+I SWN ++S +M +G ID A F M ER++V+W +++ GY +G A LF M
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 63 ---------------LQDSSLK---------PDKFTLAST--LSACTNLENMNLGKQI-- 94
LQD + PDK +A T + ++ ++I
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 95 ----HSYIIRTEFDISGAVQN----------------------ALISMYAKTGGVEVARR 128
S I T ++G QN +++ Y + G +E A
Sbjct: 197 EMSERSVITWTTM-VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEE 255
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ E + + IA A++ G + G+I AR++FDS++ R+ +W +I + +NG
Sbjct: 256 LFEVMPVKPV--IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL 313
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+AL+LF M K+G RP TL ++LSV + ASL+HGKQ+HA +R + D+ + V + L+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM-LALGIEPD 307
TMY K G + ++ +F+ + D + W+S+I A HGLGEEA+++F +M L+ +P+
Sbjct: 374 TMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPN 432
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
+T+V LSAC++ G+VE+G + M SV ++P +HYACM+D+ GRAG EA + I
Sbjct: 433 EVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
++M +EPD WGSLL +C+ + +D+A+ A++L+ IEP+NSG Y L+N+Y++ G+W
Sbjct: 493 DSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWA 552
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIF--GAEDSLHPQKDEIYKMMDKIWEEIKK 485
D A++RKLM R V+K G SW E++N+VH F G +S HP+++ I K++D++ +++
Sbjct: 553 DVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINS-HPEQESILKILDELDGLLRE 611
Query: 486 LGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTA 545
G+ PD LHD++ E K L+YHSE+LA+A+ ++ E +R+MKNLR+C+DCHTA
Sbjct: 612 AGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTA 671
Query: 546 IKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
IK ISK+ REII+RD RFHHF++G CSC+DYW
Sbjct: 672 IKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 39/314 (12%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
++ + + N MIS G I A F M ER+ +W ++I + ++GF+ EAL+LF
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF-I 320
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
++Q ++P TL S LS C +L +++ GKQ+H+ ++R +FD+ V + L++MY K
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC- 379
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
G++ ++ IFD ++D++ W ++I GY
Sbjct: 380 --------------------------------GELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 182 VQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
+GL ++AL++F M G +PN T A LS S + G +I+ S
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 241 ISVGNA-LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
I+ A ++ M +AG + A ++ + + D W S++ A H + A E K
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA-EFCAKK 526
Query: 300 LALGIEPDHI-TYV 312
L + IEP++ TY+
Sbjct: 527 L-IEIEPENSGTYI 539
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 182/408 (44%), Gaps = 55/408 (13%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N+ I+ G+I A F + I +WNSM+AGY + ++A +LF M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR- 127
PD+ ++ ++N + + + + E ++ AL+ Y G V+VA
Sbjct: 75 -PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV--VSWTALVKGYVHNGKVDVAES 131
Query: 128 ---RVVEQSEIS-------------------------DLDAIAFTALLDGYAKLGDITPA 159
++ E++++S D D IA T+++ G K G + A
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 160 RQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRG 219
R+IFD + R V+ WT M+ GY QN DDA ++F M P + +ML +
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQN 247
Query: 220 ASLNHGKQI-HASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSS 278
+ +++ ++ + NA+I+ + G I A++VF+ + ND SW +
Sbjct: 248 GRIEDAEELFEVMPVK-----PVIACNAMISGLGQKGEIAKARRVFDSMKERNDA-SWQT 301
Query: 279 MIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVH 338
+I ++G EA++LF M G+ P T + +LS C + + G+ + A +
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK---QVHAQLV 358
Query: 339 KIEPTLSHY--ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
+ + + Y + ++ +Y + G L ++ + P D+I W S++S
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIIS 405
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 39/342 (11%)
Query: 111 NALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRD 170
N++++ Y AR++ + E+ D + I++ L+ GY K G+I AR++FD + R+
Sbjct: 52 NSMVAGYFANLMPRDARKLFD--EMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERN 109
Query: 171 VVAWTAMIVGYVQNGLNDDALELFRAMT---------------KEGPRPNSFTLAAMLSV 215
VV+WTA++ GYV NG D A LF M ++G ++ L M+
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD 169
Query: 216 SSRGA--SLNHGKQIHASAIRSRE------DLSISVGNALITMYAKAGSIDNAQKVFNLI 267
A S+ HG +RE + S+ ++T Y + +D+A+K+F+++
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+ VSW+SM++ Q+G E+A ELFE M + I ++S G + +
Sbjct: 230 PEKTE-VSWTSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIAKA 284
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLS 384
R F+ M E + + +I ++ R G EA F ++ + P S+LS
Sbjct: 285 RRVFDSMK-----ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 385 SCKVYKNVDLAKIAAERLLLIEPD-NSGAYSALANVYSACGK 425
C ++ K +L+ + D + S L +Y CG+
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 35/303 (11%)
Query: 151 AKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
+++G I AR++FDS ++ + +W +M+ GY N + DA +LF M P N +
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----PDRNIISWN 83
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
++S + ++ +++ + R +S + AL+ Y G +D A+ +F W
Sbjct: 84 GLVSGYMKNGEIDEARKVF-DLMPERNVVSWT---ALVKGYVHNGKVDVAESLF----WK 135
Query: 271 ---NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+ VSW+ M+I Q G ++A +L+E + + D+I ++ G V++
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEA 191
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCK 387
R F+ M+ E ++ + M+ YG+ + +A K + MP E ++W S+L
Sbjct: 192 REIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMG-- 243
Query: 388 VYKNVDLAKIA-AERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQG 446
V +I AE L + P A + S G+ + AK R++ + +K+
Sbjct: 244 ---YVQNGRIEDAEELFEVMP--VKPVIACNAMISGLGQKGEIAKARRVFD--SMKERND 296
Query: 447 SSW 449
+SW
Sbjct: 297 ASW 299
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 447 bits (1150), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/578 (39%), Positives = 343/578 (59%), Gaps = 36/578 (6%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + N ++ + R+ F +M E D V++N +I+ Y+Q + +L F M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
Q F A+ LS NL ++ +G+Q+H + D V N+L+ MYAK
Sbjct: 343 -QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC-- 399
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ E++E+ IF SL R V+WTA+I GYV
Sbjct: 400 -----EMFEEAEL--------------------------IFKSLPQRTTVSWTALISGYV 428
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
Q GL+ L+LF M R + T A +L S+ ASL GKQ+HA IRS ++
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
G+ L+ MYAK GSI +A +VF + + + VSW+++I A A +G GE AI F KM+
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEM-PDRNAVSWNALISAHADNGDGEAAIGAFAKMIES 547
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
G++PD ++ +GVL+AC+H G VEQG YF M+ ++ I P HYACM+DL GR G E
Sbjct: 548 GLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 363 AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEP-DNSGAYSALANVYS 421
A K ++ MP EPD I W S+L++C+++KN LA+ AAE+L +E ++ AY +++N+Y+
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYA 667
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWE 481
A G+WE ++K M +RG+KK SW+E+ +++H+F + D HP DEI + ++++
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Query: 482 EIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICND 541
EI++ G+ PDT SV+ D++ ++K + L+YHSE+LA+AF +ISTPE + +MKNLR C D
Sbjct: 728 EIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRD 787
Query: 542 CHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
CH AIK ISK++ REI VRD +RFHHF +G CSC DYW
Sbjct: 788 CHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 234/525 (44%), Gaps = 75/525 (14%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+T N+++ + R+DLA F+++ E+D VT+N++I GY + G E++ LF M Q
Sbjct: 184 LTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ 243
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
S +P FT + L A L + LG+Q+H+ + T F +V N ++ Y+K
Sbjct: 244 -SGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD--- 299
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
RV+E R +FD + D V++ +I Y Q
Sbjct: 300 ---RVLE---------------------------TRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
+ +L FR M G +F A MLS+++ +SL G+Q+H A+ + D + VG
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
N+L+ MYAK + A+ +F + TVSW+++I Q GL ++LF KM +
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSL-PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
D T+ VL A + G+ + +E S ++D+Y + G +++A
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAV 507
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSA 422
+ E MP + + ++W +L+S+ + + A A +++ ++PD+ L S
Sbjct: 508 QVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC-SH 565
Query: 423 CGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI--- 479
CG EQG+ + + + ++ + P+K M+D +
Sbjct: 566 CGFV-----------------EQGTEYFQAMSPIY------GITPKKKHYACMLDLLGRN 602
Query: 480 --WEEIKKL----GFIPDT---DSVLHDLEIEVKDKLLRYHSEKL 515
+ E +KL F PD SVL+ I L +EKL
Sbjct: 603 GRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 210/476 (44%), Gaps = 75/476 (15%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
++ S N MIS H+ +G + A F M +R +VTW ++ Y ++ EA +LF M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 63 LQDSSLK-PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISG--AVQNALISMYAK 119
+ SS PD T + L C + N Q+H++ ++ FD + V N L+ Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIV 179
+++A + E EI + D++ F L+ GY K
Sbjct: 197 VRRLDLACVLFE--EIPEKDSVTFNTLITGYEK--------------------------- 227
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
+GL +++ LF M + G +P+ FT + +L G+Q+HA ++ +
Sbjct: 228 ----DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
SVGN ++ Y+K + + +F+ + D VS++ +I + +Q E ++ F +M
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEM-PELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
+G + + + +LS ++ ++ GR + A + + L ++D+Y + +
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQ-LHCQALLATADSILHVGNSLVDMYAKCEM 401
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLS----------SCKVYKNVDLAKIAAER-------- 401
+EA +++P + ++W +L+S K++ + + + A++
Sbjct: 402 FEEAELIFKSLP-QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 402 -------LLLIEP-----------DNSGAYSALANVYSACGKWEDAAKIRKLMNDR 439
LLL + +N + S L ++Y+ CG +DA ++ + M DR
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%), Gaps = 21/304 (6%)
Query: 92 KQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYA 151
+++ + II+T FD N ++ + G V AR+V + E+ + ++ ++ G+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYD--EMPHKNTVSTNTMISGHV 90
Query: 152 KLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP--RPNSFTL 209
K GD++ AR +FD++ +R VV WT ++ Y +N D+A +LFR M + P+ T
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSREDLS--ISVGNALITMYAKAGSIDNAQKVFNLI 267
+L + N Q+HA A++ D + ++V N L+ Y + +D A +F I
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
D+V+++++I + GL E+I LF KM G +P T+ GVL A VGL +
Sbjct: 211 -PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHD-- 265
Query: 328 RSYFNLMASVHKIEPT--LSHYAC----MIDLYGRAGLLQEAFKFIENMPIEPDVIAWGS 381
F L +H + T S A ++D Y + + E + MP E D +++
Sbjct: 266 ---FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNV 321
Query: 382 LLSS 385
++SS
Sbjct: 322 VISS 325
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/523 (41%), Positives = 330/523 (63%), Gaps = 8/523 (1%)
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+++ + PD T L + N ++ LG++ H+ I+ D V+ +L++MY+ G
Sbjct: 53 MRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGD 112
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ A+RV + S DL A + ++++ YAK G I AR++FD + R+V++W+ +I GYV
Sbjct: 113 LRSAQRVFDDSGSKDLPA--WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 183 QNGLNDDALELFRAMTKEGP-----RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE 237
G +AL+LFR M P RPN FT++ +LS R +L GK +HA +
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 238 DLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
++ I +G ALI MYAK GS++ A++VFN + D ++S+MI LA +GL +E +LF
Sbjct: 231 EIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 298 KMLAL-GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGR 356
+M I P+ +T+VG+L AC H GL+ +G+SYF +M I P++ HY CM+DLYGR
Sbjct: 291 EMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSAL 416
+GL++EA FI +MP+EPDV+ WGSLLS ++ ++ + A +RL+ ++P NSGAY L
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLL 410
Query: 417 ANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMM 476
+NVY+ G+W + IR M +G+ K G S++E++ VH F D + + IY M+
Sbjct: 411 SNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAML 470
Query: 477 DKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNL 536
D+I + +++ G++ DT VL DL + K+ L YHSEKLAIAF ++ T T +RI+KNL
Sbjct: 471 DEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNL 530
Query: 537 RICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
RIC DCH +K ISKL REI+VRD RFHHF+DG CSCRD+W
Sbjct: 531 RICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 44/287 (15%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+ + +WN +++ + +G ID A F +M ER++++W+ +I GY G KEAL+LF M
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 63 ----LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
++ ++P++FT+++ LSAC L + GK +H+YI + +I + ALI MYA
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 119 KTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMI 178
K G +E A+RV F AL +DV A++AMI
Sbjct: 246 KCGSLERAKRV-------------FNALGS-------------------KKDVKAYSAMI 273
Query: 179 VGYVQNGLNDDALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE 237
GL D+ +LF M T + PNS T +L +N GK I E
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI---E 330
Query: 238 DLSISVG----NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMI 280
+ I+ ++ +Y ++G I A+ + D + W S++
Sbjct: 331 EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 36/251 (14%)
Query: 178 IVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE 237
IV V + + ++ M P+ T +L L G++ HA +
Sbjct: 34 IVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGL 93
Query: 238 DLSISVGNALITMYAKAGSIDNAQKVF------NLICWNN-------------------- 271
D V +L+ MY+ G + +AQ+VF +L WN+
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 272 ----DTVSWSSMIIALAQHGLGEEAIELFEKMLALG-----IEPDHITYVGVLSACTHVG 322
+ +SWS +I G +EA++LF +M + P+ T VLSAC +G
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 323 LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
+EQG+ + H +E + +ID+Y + G L+ A + + + DV A+ ++
Sbjct: 214 ALEQGKWVHAYIDKYH-VEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAM 272
Query: 383 LSSCKVYKNVD 393
+ +Y D
Sbjct: 273 ICCLAMYGLTD 283
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/579 (40%), Positives = 350/579 (60%), Gaps = 49/579 (8%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDS 66
S+NIM+S ++ + + A + F +M +D +WN+MI GY + G ++A ELF SM++ +
Sbjct: 40 SYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN 99
Query: 67 SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
+ NA+IS Y + G +E A
Sbjct: 100 EVS----------------------------------------WNAMISGYIECGDLEKA 119
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIF-DSLRNRDVVAWTAMIVGYVQNG 185
+ + + + +A+TA++ GY K + A +F D N+++V W AMI GYV+N
Sbjct: 120 SHFFKVAPVRGV--VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENS 177
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
+D L+LFRAM +EG RPNS L++ L S ++L G+QIH +S ++
Sbjct: 178 RPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALT 237
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
+LI+MY K G + +A K+F ++ D V+W++MI AQHG ++A+ LF +M+ I
Sbjct: 238 SLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 296
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
PD IT+V VL AC H GLV G +YF M +K+EP HY CM+DL GRAG L+EA K
Sbjct: 297 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 356
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
I +MP P +G+LL +C+V+KNV+LA+ AAE+LL + N+ Y LAN+Y++ +
Sbjct: 357 LIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNR 416
Query: 426 WEDAAKIRKLMNDRGVKKEQ-----GSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIW 480
WED A++RK M + V K + G SW+EI+N+VH F + D +HP+ D I+K + ++
Sbjct: 417 WEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELE 476
Query: 481 EEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICN 540
+++K G+ P+ + LH++E E K+KLL +HSEKLA+AFG I P+ + +++ KNLRIC
Sbjct: 477 KKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICG 536
Query: 541 DCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
DCH AIKFIS++ REIIVRD TRFHHFKDG CSC DYW
Sbjct: 537 DCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 575
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 73/290 (25%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHG-------FDKE 54
+ SWN MI+ + G ++ A F M E++ V+WN+MI+GY + G F K
Sbjct: 66 FKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKV 125
Query: 55 A--------------------LELFSSMLQDSSL-------------------------- 68
A +EL +M +D ++
Sbjct: 126 APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKL 185
Query: 69 ---------KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+P+ L+S L C+ L + LG+QIH + ++ +LISMY K
Sbjct: 186 FRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 245
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPA----RQIFDSLRNRDVVAWT 175
G + A ++ E + D +A+ A++ GYA+ G+ A R++ D+ D + +
Sbjct: 246 CGELGDAWKLFEV--MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 303
Query: 176 AMIVGYVQNGLNDDALELFRAMTKE---GPRPNSFTLAAMLSVSSRGASL 222
A+++ GL + + F +M ++ P+P+ +T M+ + R L
Sbjct: 304 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT--CMVDLLGRAGKL 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+T+ +IS++ G + A F+ M ++D+V WN+MI+GY QHG +AL LF M+
Sbjct: 233 VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI- 291
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRT-EFDISGAVQNALISMYAKTGGV 123
D+ ++PD T + L AC + +N+G ++R + + ++ + + G +
Sbjct: 292 DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 351
Query: 124 EVARRVVEQSEISDLDAIAFTAL 146
E A +++ A+ T L
Sbjct: 352 EEALKLIRSMPFRPHAAVFGTLL 374
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/545 (40%), Positives = 336/545 (61%), Gaps = 35/545 (6%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D+V WN+M+AGY Q + L+LF+ M + + D FTLA+ C L +N GKQ+
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
H+Y I++ +D LD + +LD Y K G
Sbjct: 540 HAYAIKSGYD---------------------------------LDLWVSSGILDMYVKCG 566
Query: 155 DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
D++ A+ FDS+ D VAWT MI G ++NG + A +F M G P+ FT+A +
Sbjct: 567 DMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAK 626
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTV 274
SS +L G+QIHA+A++ VG +L+ MYAK GSID+A +F I N T
Sbjct: 627 ASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT- 685
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
+W++M++ LAQHG G+E ++LF++M +LGI+PD +T++GVLSAC+H GLV + + M
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDL 394
+ I+P + HY+C+ D GRAGL+++A IE+M +E + +LL++C+V + +
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Query: 395 AKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQN 454
K A +LL +EP +S AY L+N+Y+A KW++ R +M VKK+ G SW+E++N
Sbjct: 806 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Query: 455 EVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEK 514
++HIF +D + Q + IY+ + + +IK+ G++P+TD L D+E E K++ L YHSEK
Sbjct: 866 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEK 925
Query: 515 LAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCS 574
LA+AFG++STP +T +R++KNLR+C DCH A+K+I+K+ REI++RD RFH FKDG CS
Sbjct: 926 LAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICS 985
Query: 575 CRDYW 579
C DYW
Sbjct: 986 CGDYW 990
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 225/452 (49%), Gaps = 59/452 (13%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+T N +I+++ + A F MSERD+++WNS+IAG Q+G + EA+ LF +L+
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 65 DSSLKPDKFTLASTLSACTNL-ENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
LKPD++T+ S L A ++L E ++L KQ+H + I+ ++S
Sbjct: 410 -CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN-NVS----------------- 450
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
D+ TAL+D Y++ + A +F+ N D+VAW AM+ GY Q
Sbjct: 451 ---------------DSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQ 494
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
+ L+LF M K+G R + FTLA + ++N GKQ+HA AI+S DL + V
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
+ ++ MY K G + AQ F+ I +D V+W++MI ++G E A +F +M +G
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHY--ACMIDLYGRAGLLQ 361
+ PD T + A + + +EQGR + A+ K+ T + ++D+Y + G +
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGR---QIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 362 EA---FKFIENMPIEPDVIAWGSLLSSCKVY--KNVDLAKIAAERLLLIEPDNSGAYSAL 416
+A FK IE M ++ AW ++L + L + L I+PD
Sbjct: 671 DAYCLFKRIEMM----NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK----VTF 722
Query: 417 ANVYSAC---GKWEDAAK-IRKLMNDRGVKKE 444
V SAC G +A K +R + D G+K E
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 171/357 (47%), Gaps = 41/357 (11%)
Query: 32 SERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLG 91
S +I+ N ++ Y G L+ F+ M++ S ++ D+ T L+ ++++ LG
Sbjct: 276 SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE-SDVECDQVTFILMLATAVKVDSLALG 334
Query: 92 KQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYA 151
+Q+H ++ D+ V N+LI+MY K L F
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCK------------------LRKFGF-------- 368
Query: 152 KLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAA 211
AR +FD++ RD+++W ++I G QNGL +A+ LF + + G +P+ +T+ +
Sbjct: 369 -------ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 212 ML-SVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
+L + SS L+ KQ+H AI+ V ALI Y++ + A+ +F N
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER--HN 479
Query: 271 NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS- 329
D V+W++M+ Q G + ++LF M G D T V C + + QG+
Sbjct: 480 FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
+ + S + ++ +S + ++D+Y + G + A +++P+ PD +AW +++S C
Sbjct: 540 HAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 208/462 (45%), Gaps = 57/462 (12%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFD-----KEALELFSSML 63
N +IS++ G + A F +M +RD+V+WNS++A Y Q ++A LF +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
QD + + TL+ L C + + + H Y + D V AL+++Y K G V
Sbjct: 138 QDV-VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKV 196
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLG----------------------------- 154
+ + + E E+ D + + +L Y ++G
Sbjct: 197 KEGKVLFE--EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLAR 254
Query: 155 ---DITPARQIFDSLRNRDVVAWTAMIVG------YVQNGLNDDALELFRAMTKEGPRPN 205
D + A Q+ D + + +I Y+ +G L+ F M + +
Sbjct: 255 ISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECD 314
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
T ML+ + + SL G+Q+H A++ DL ++V N+LI MY K A+ VF+
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD 374
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHV--GL 323
+ D +SW+S+I +AQ+GL EA+ LF ++L G++PD T VL A + + GL
Sbjct: 375 NMS-ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ + + + ++ + + A +ID Y R ++EA E D++AW +++
Sbjct: 434 SLSKQVHVHAI-KINNVSDSFVSTA-LIDAYSRNRCMKEAEILFERHNF--DLVAWNAMM 489
Query: 384 SS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
+ + + K+ A L+ + + S ++ LA V+ CG
Sbjct: 490 AGYTQSHDGHKTLKLFA--LMHKQGERSDDFT-LATVFKTCG 528
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G ID A F+++ +I WN+M+ G QHG KE L+LF M + +KP
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM-KSLGIKP 717
Query: 71 DKFTLASTLSACTN----LENMNLGKQIHS-YIIRTEFDISGAVQNALISMYAKTGGVEV 125
DK T LSAC++ E + +H Y I+ E + + +AL + G V+
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL----GRAGLVKQ 773
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQI 162
A ++E + + A + LL GD +++
Sbjct: 774 AENLIESMSM-EASASMYRTLLAACRVQGDTETGKRV 809
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 225 GKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALA 284
GK HA + E+ + N LI+MY+K GS+ A++VF+ + + D VSW+S++ A A
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP-DRDLVSWNSILAAYA 116
Query: 285 QHGLG-----EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK 339
Q ++A LF + + +T +L C H G V S+ +
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI-G 175
Query: 340 IEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
++ ++++Y + G ++E E MP DV+ W +L +
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/634 (36%), Positives = 358/634 (56%), Gaps = 66/634 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ R++ A F +M E+D + WN+MI+GY ++ E++++F ++ +S +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRT-----EFDISGAVQ--------------- 110
D TL L A L+ + LG QIHS +T ++ ++G +
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 111 -----------NALISMYAKTGGVEVARRVVEQSEISDL--------------------- 138
NA+I Y G E++ + ++ +S
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 139 -------------DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
A TAL Y+KL +I AR++FD + + +W AMI GY QNG
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
L +DA+ LFR M K PN T+ +LS ++ +L+ GK +H + + SI V
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
ALI MYAK GSI A+++F+L+ N+ V+W++MI HG G+EA+ +F +ML GI
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNE-VTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
P +T++ VL AC+H GLV++G FN M + EP++ HYACM+D+ GRAG LQ A +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
FIE M IEP W +LL +C+++K+ +LA+ +E+L ++PDN G + L+N++SA
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRN 638
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKK 485
+ AA +R+ R + K G + +EI H+F + D HPQ EIY+ ++K+ ++++
Sbjct: 639 YPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698
Query: 486 LGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTA 545
G+ P+T+ LHD+E E ++ +++ HSE+LAIAFG+I+T T +RI+KNLR+C DCHT
Sbjct: 699 AGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTV 758
Query: 546 IKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
K ISK+ R I+VRD RFHHFKDG CSC DYW
Sbjct: 759 TKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 187/453 (41%), Gaps = 66/453 (14%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAST 78
G I A F + D+ +N ++ G++ + +L +F+ + + + LKP+ T A
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
+SA + + G+ IH + D + + ++ MY K VE AR+V
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKV--------- 176
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
FD + +D + W MI GY +N + +++++FR +
Sbjct: 177 ------------------------FDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 199 KEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
E R ++ TL +L + L G QIH+ A ++ V I++Y+K G I
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
+F D V++++MI +G E ++ LF++++ G T V ++
Sbjct: 273 KMGSALFREF-RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331
Query: 318 CTHVGLVEQGRSY----------------------FNLMASVHKI-----EPTLSHYACM 350
H+ L+ Y N + S K+ E +L + M
Sbjct: 332 SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 351 IDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEP 407
I Y + GL ++A F+ ++ P+ + +LS+C + L K + + +
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451
Query: 408 DNSGAYS-ALANVYSACGKWEDAAKIRKLMNDR 439
++S S AL +Y+ CG +A ++ LM +
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 441 bits (1133), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/569 (39%), Positives = 343/569 (60%), Gaps = 36/569 (6%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G ++ A F M ER++V+WNSMI Y Q+ KEA+ +F ML D +KP
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEGVKP 335
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
++ L AC +L ++ G+ IH + D + +V N+LISMY K V+
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT----- 390
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
A +F L++R +V+W AMI+G+ QNG DA
Sbjct: 391 ----------------------------AASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L F M +P++FT ++++ + + +H K IH +RS D ++ V AL+ M
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK G+I A+ +F+++ + T +W++MI HG G+ A+ELFE+M I+P+ +T
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVT-TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVT 541
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
++ V+SAC+H GLVE G F +M + IE ++ HY M+DL GRAG L EA+ FI M
Sbjct: 542 FLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Query: 371 PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAA 430
P++P V +G++L +C+++KNV+ A+ AAERL + PD+ G + LAN+Y A WE
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVG 661
Query: 431 KIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIP 490
++R M +G++K G S +EI+NEVH F + + HP +IY ++K+ IK+ G++P
Sbjct: 662 QVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVP 721
Query: 491 DTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFIS 550
DT+ VL +E +VK++LL HSEKLAI+FG+++T TT+ + KNLR+C DCH A K+IS
Sbjct: 722 DTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYIS 780
Query: 551 KLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+ GREI+VRD+ RFHHFK+G CSC DYW
Sbjct: 781 LVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 199/405 (49%), Gaps = 78/405 (19%)
Query: 20 RIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
+++ A F +M ERD+V+WN+++AGY+Q+G + ALE+ SM ++ +LKP T+ S L
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE-NLKPSFITIVSVL 243
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
A + L +++GK+IH Y +R+ FD + AL+ MYAK G +E
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET-------------- 289
Query: 140 AIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTK 199
ARQ+FD + R+VV+W +MI YVQN +A+ +F+ M
Sbjct: 290 -------------------ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 200 EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDN 259
EG +P ++ L + L G+ IH ++ D ++SV N+LI+MY K +D
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 260 AQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA-- 317
A +F + + VSW++MI+ AQ+G +A+ F +M + ++PD TYV V++A
Sbjct: 391 AASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 318 ---CTH------------------------------VGLVEQGRSYFNLMASVHKIEPTL 344
TH G + R F++M+ H +
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-----V 504
Query: 345 SHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSC 386
+ + MID YG G + A + E M I+P+ + + S++S+C
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 221/465 (47%), Gaps = 69/465 (14%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++SL G +D A F+ + + V +++M+ G+ + +AL+ F M D ++P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD-VEP 133
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ L C + + +GK+IH ++++ F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS-------------------------- 167
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
LD A T L + YAK + AR++FD + RD+V+W ++ GY QNG+ A
Sbjct: 168 -------LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
LE+ ++M +E +P+ T+ ++L S ++ GK+IH A+RS D +++ AL+ M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK GS++ A+++F+ + N VSW+SMI A Q+ +EA+ +F+KML G++P ++
Sbjct: 281 YAKCGSLETARQLFDGMLERN-VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 311 YVGVLSACTHVGLVEQGR---------------SYFNLMASVH--------------KIE 341
+G L AC +G +E+GR S N + S++ K++
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 342 P-TLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSCKVYKNVDLAK- 396
TL + MI + + G +A + M ++PD + S++++ AK
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 397 IAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
I + N +AL ++Y+ CG A I +M++R V
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 35/259 (13%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+++ N +IS++ +D A + F ++ R +V+WN+MI G+ Q+G +AL FS M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ ++KPD FT S ++A L + K IH ++R+ D + V AL+ MYAK G
Sbjct: 430 -RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ +AR + FD + R V W AMI GY
Sbjct: 489 IMIARLI---------------------------------FDMMSERHVTTWNAMIDGYG 515
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHG-KQIHASAIRSREDLSI 241
+G ALELF M K +PN T +++S S + G K + +LS+
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 242 SVGNALITMYAKAGSIDNA 260
A++ + +AG ++ A
Sbjct: 576 DHYGAMVDLLGRAGRLNEA 594
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 147/305 (48%), Gaps = 12/305 (3%)
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
T L+ + + G + A ++F+ + ++ V + M+ G+ + D AL+ F M +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
P + +L V A L GK+IH ++S L + L MYAK ++ A+KV
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 264 FNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGL 323
F+ + D VSW++++ +Q+G+ A+E+ + M ++P IT V VL A + + L
Sbjct: 193 FDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ G+ A + ++ ++D+Y + G L+ A + + M +E +V++W S++
Sbjct: 252 ISVGKEIHGY-AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMI 309
Query: 384 SSCKVYKNVDLAKIAAERLL--LIEPDNSGAYSALANVYSAC---GKWEDAAKIRKLMND 438
+ +N A + +++L ++P + AL AC G E I KL +
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL----HACADLGDLERGRFIHKLSVE 365
Query: 439 RGVKK 443
G+ +
Sbjct: 366 LGLDR 370
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/571 (38%), Positives = 349/571 (61%), Gaps = 40/571 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N++I++++ ++ A F QM +R++++W +MI+ Y++ ++ALEL ML+D+ +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN-V 158
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+P+ +T +S L +C + ++ + +H II+ G+E
Sbjct: 159 RPNVYTYSSVLRSCNGMSDV---RMLHCGIIKE--------------------GLES--- 192
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
D +AL+D +AKLG+ A +FD + D + W ++I G+ QN +D
Sbjct: 193 ----------DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 242
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
ALELF+ M + G TL ++L + A L G Q H ++ +DL ++ NAL+
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALV 300
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MY K GS+++A +VFN + D ++WS+MI LAQ+G +EA++LFE+M + G +P++
Sbjct: 301 DMYCKCGSLEDALRVFNQM-KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
IT VGVL AC+H GL+E G YF M ++ I+P HY CMIDL G+AG L +A K +
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
M EPD + W +LL +C+V +N+ LA+ AA++++ ++P+++G Y+ L+N+Y+ KW+
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
+IR M DRG+KKE G SW+E+ ++H F D+ HPQ E+ K ++++ + +G+
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Query: 489 IPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKF 548
+P+T+ VL DLE E + LR+HSEKLA+AFG+++ P +RI KNLRIC DCH K
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599
Query: 549 ISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
SKL R I++RD R+HHF+DG CSC DYW
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 347/575 (60%), Gaps = 41/575 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I L+ GR+ F +M RD+++WNS+I Y + A+ LF M + S +
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRI 344
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEF---DISGAVQNALISMYAKTGGVEV 125
+PD TL S S + L ++ + + + +R + DI+ + NA++ MYAK
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT--IGNAVVVMYAK------ 396
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
LG + AR +F+ L N DV++W +I GY QNG
Sbjct: 397 ---------------------------LGLVDSARAVFNWLPNTDVISWNTIISGYAQNG 429
Query: 186 LNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
+A+E++ M +EG N T ++L S+ +L G ++H +++ L + V
Sbjct: 430 FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV 489
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+L MY K G +++A +F I N +V W+++I HG GE+A+ LF++ML G+
Sbjct: 490 TSLADMYGKCGRLEDALSLFYQIPRVN-SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
+PDHIT+V +LSAC+H GLV++G+ F +M + + I P+L HY CM+D+YGRAG L+ A
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
KFI++M ++PD WG+LLS+C+V+ NVDL KIA+E L +EP++ G + L+N+Y++ G
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 425 KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
KWE +IR + + +G++K G S +E+ N+V +F + HP +E+Y+ + + ++K
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 485 KLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHT 544
+G++PD VL D+E + K+ +L HSE+LAIAF +I+TP TT+RI KNLR+C DCH+
Sbjct: 729 MIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHS 788
Query: 545 AIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
KFISK+ REIIVRD RFHHFK+G CSC DYW
Sbjct: 789 VTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 195/465 (41%), Gaps = 97/465 (20%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+++L+ G + LA F + RD+ WN MI+GY + G E + FS + S L P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D T S L AC + + G +IH ++ F V +LI +Y++ V AR +
Sbjct: 152 DYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
++ + D+ ++ A++ GY + G+ A + + LR D
Sbjct: 209 DEMPVRDMG--SWNAMISGYCQSGNAKEALTLSNGLRAMD-------------------- 246
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
S T+ ++LS + N G IH+ +I+ + + V N LI +
Sbjct: 247 ---------------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YA+ G + + QKVF+ + + D +SW+S+I A + AI LF++M I+PD +T
Sbjct: 292 YAEFGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 311 YV---------GVLSACTHV---------------------------GLVEQGRSYFNLM 334
+ G + AC V GLV+ R+ FN +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIA----WGSLLSSCKVYK 390
+ I + +I Y + G EA + M E ++ A W S+L +C
Sbjct: 411 PNTDVIS-----WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 391 NVDLAKIAAERLLLIEPDNSGAY------SALANVYSACGKWEDA 429
+ RLL +G Y ++LA++Y CG+ EDA
Sbjct: 466 ALRQGMKLHGRLL-----KNGLYLDVFVVTSLADMYGKCGRLEDA 505
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 46/321 (14%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
L IT N ++ ++ G +D A A F + D+++WN++I+GY Q+GF EA+E+++
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M ++ + ++ T S L AC+ + G ++H +++ + V +L MY K G
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+E DA++ +F + + V W +I +
Sbjct: 501 RLE--------------DALS-------------------LFYQIPRVNSVPWNTLIACH 527
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
+G + A+ LF+ M EG +P+ T +LS S ++ G Q +++ ++
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-QWCFEMMQTDYGITP 586
Query: 242 SVGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEAIE-L 295
S+ + ++ MY +AG ++ A K + D W +++ A HG LG+ A E L
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 296 FEKMLALGIEPDHITYVGVLS 316
FE +EP+H+ Y +LS
Sbjct: 647 FE------VEPEHVGYHVLLS 661
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/640 (36%), Positives = 356/640 (55%), Gaps = 71/640 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I+L++ A F M ER++V+W +M+ GY GFD E L+LF SM
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNAL--------------- 113
+P++F +C+N + GKQ H ++ V+N L
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 114 ----------------ISMYAKTG----GVEVARRVVEQ----------------SEISD 137
+S Y + G G++V R+ + S + D
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 138 LDAI-----------------AFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
L+ A AL++ Y K G + A+++FD +++ T ++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 181 YVQNGLNDDALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
Y Q+ ++AL LF M TKE P PN +T A +L+ + + L G +H ++S
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVP-PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
+ VGNAL+ MYAK+GSI++A+K F+ + + D V+W++MI + HGLG EA+E F++M
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
+ G P+ IT++GVL AC+H+G VEQG YFN + ++P + HY C++ L +AG+
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANV 419
++A F+ PIE DV+AW +LL++C V +N L K AE + P++SG Y L+N+
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNI 550
Query: 420 YSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
++ +WE AK+R LMN+RGVKKE G SW+ I+N+ H+F AED+ HP+ IY + ++
Sbjct: 551 HAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEV 610
Query: 480 WEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRIC 539
+IK LG+ PD HD++ E ++ L YHSEKLA+A+G+I TPE + L + KN+RIC
Sbjct: 611 MSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRIC 670
Query: 540 NDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+DCH+AIK ISK+ R I++RD RFHHF DG CSC DYW
Sbjct: 671 DDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 122/291 (41%), Gaps = 45/291 (15%)
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSE 134
L L C N + +G+ IH+++I V QS
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLI-----------------------------VTNQSS 64
Query: 135 ISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
++ DA +L++ Y K + AR++FD + R+VV+W AM+ GY +G + + L+LF
Sbjct: 65 RAE-DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLF 123
Query: 195 RAMTKEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
++M G RPN F + S + GKQ H ++ V N L+ MY+
Sbjct: 124 KSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSL 183
Query: 254 AGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVG 313
A +V + + + + +V +SS + + G +E +++ K +++TY+
Sbjct: 184 CSGNGEAIRVLDDLPYCDLSV-FSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLS 242
Query: 314 VLSACTHVGLVEQGRSYFNLMASVHK------IEPTLSHYACMIDLYGRAG 358
L +++ NL VH + +I++YG+ G
Sbjct: 243 SLRLFSNL-------RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCG 286
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 337/546 (61%), Gaps = 35/546 (6%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
++ WN++I GY + G A L+ M ++PD T + A T + ++ LG+ I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
HS +IR+ F VQN+L+ +YA G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANC---------------------------------G 170
Query: 155 DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
D+ A ++FD + +D+VAW ++I G+ +NG ++AL L+ M +G +P+ FT+ ++LS
Sbjct: 171 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLS 230
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTV 274
++ +L GK++H I+ ++ N L+ +YA+ G ++ A+ +F+ + + ++V
Sbjct: 231 ACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV-DKNSV 289
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLAL-GIEPDHITYVGVLSACTHVGLVEQGRSYFNL 333
SW+S+I+ LA +G G+EAIELF+ M + G+ P IT+VG+L AC+H G+V++G YF
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 334 MASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVD 393
M +KIEP + H+ CM+DL RAG +++A+++I++MP++P+V+ W +LL +C V+ + D
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Query: 394 LAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQ 453
LA+ A ++L +EP++SG Y L+N+Y++ +W D KIRK M GVKK G S +E+
Sbjct: 410 LAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVG 469
Query: 454 NEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSE 513
N VH F D HPQ D IY + ++ ++ G++P +V D+E E K+ + YHSE
Sbjct: 470 NRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSE 529
Query: 514 KLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFC 573
K+AIAF +ISTPE + + ++KNLR+C DCH AIK +SK+ REI+VRD +RFHHFK+G C
Sbjct: 530 KIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSC 589
Query: 574 SCRDYW 579
SC+DYW
Sbjct: 590 SCQDYW 595
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 44/305 (14%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ L+ N G + A F +M E+D+V WNS+I G+ ++G +EAL L++ M +
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGI 218
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KPD FT+ S LSAC + + LGK++H Y+I+ + N L+ +YA+ G VE A+
Sbjct: 219 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK- 277
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+FD + +++ V+WT++IVG NG
Sbjct: 278 --------------------------------TLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 189 DALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG--- 244
+A+ELF+ M + EG P T +L S + G + R RE+ I
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR---RMREEYKIEPRIEH 362
Query: 245 -NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
++ + A+AG + A + + + V W +++ A H G+ + F ++ L
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQ 420
Query: 304 IEPDH 308
+EP+H
Sbjct: 421 LEPNH 425
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 5/227 (2%)
Query: 159 ARQIFDSLRNR-DVVAWTAMIVGYVQNGLNDDALELFRAMTKEG-PRPNSFTLAAMLSVS 216
A ++F + +V W +I GY + G + A L+R M G P++ T ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 217 SRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSW 276
+ A + G+ IH+ IRS I V N+L+ +YA G + +A KVF+ + D V+W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAW 190
Query: 277 SSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMAS 336
+S+I A++G EEA+ L+ +M + GI+PD T V +LSAC +G + G+ M
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 337 VHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
V + L ++DLY R G ++EA + M ++ + ++W SL+
Sbjct: 251 V-GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ S N+++ L+ GR++ A F +M +++ V+W S+I G +GF KEA+ELF M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKT 120
L P + T L AC++ + G + +R E+ I +++ ++ + A+
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARA 373
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGD 155
G V+ A ++ + + + + LL GD
Sbjct: 374 GQVKKAYEYIKSMPMQP-NVVIWRTLLGACTVHGD 407
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/572 (38%), Positives = 336/572 (58%), Gaps = 36/572 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ G +D A A F++MS+R +V++ SMIAGY + G EA++LF M ++ +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM-EEEGI 393
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD +T+ + L+ C ++ GK++H +I + V NAL+ M
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM------------ 441
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
YAK G + A +F +R +D+++W +I GY +N +
Sbjct: 442 ---------------------YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 189 DALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+AL LF + +E P+ T+A +L + ++ + G++IH +R+ V N+L
Sbjct: 481 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 540
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ MYAK G++ A +F+ I + D VSW+ MI HG G+EAI LF +M GIE D
Sbjct: 541 VDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 599
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
I++V +L AC+H GLV++G +FN+M KIEPT+ HYAC++D+ R G L +A++FI
Sbjct: 600 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 659
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
ENMPI PD WG+LL C+++ +V LA+ AE++ +EP+N+G Y +AN+Y+ KWE
Sbjct: 660 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWE 719
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLG 487
++RK + RG++K G SW+EI+ V+IF A DS +P+ + I + K+ + + G
Sbjct: 720 QVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEG 779
Query: 488 FIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIK 547
+ P T L D E K++ L HSEKLA+A GIIS+ +R+ KNLR+C DCH K
Sbjct: 780 YSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAK 839
Query: 548 FISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
F+SKL REI++RD RFH FKDG CSCR +W
Sbjct: 840 FMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 194/378 (51%), Gaps = 40/378 (10%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++ ++ + R+D A F +M+ERD+++WNS+I GY +G ++ L +F ML S +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV-SGI 292
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ D T+ S + C + ++LG+ +HS ++ F N L+ MY+K G ++ A+
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V E+SD +++T+++ GYA+ GL
Sbjct: 353 VFR--EMSDRSVVSYTSMIAGYAR-------------------------------EGLAG 379
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+A++LF M +EG P+ +T+ A+L+ +R L+ GK++H + I V NAL+
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPD 307
MYAK GS+ A+ VF+ + D +SW+++I +++ EA+ LF +L PD
Sbjct: 440 DMYAKCGSMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 308 HITYVGVLSACTHVGLVEQGRSYFN-LMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
T VL AC + ++GR +M + + + +++ ++D+Y + G L A
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS--LVDMYAKCGALLLAHML 556
Query: 367 IENMPIEPDVIAWGSLLS 384
+++ D+++W +++
Sbjct: 557 FDDIA-SKDLVSWTVMIA 573
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 203/427 (47%), Gaps = 48/427 (11%)
Query: 14 LHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKF 73
++ N G + A F ++ + WN ++ + G ++ LF M+ S ++ D +
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSY 196
Query: 74 TLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
T + + ++L +++ G+Q+H +I+++ F +V N+L++ Y K V+
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD--------- 247
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
AR++FD + RDV++W ++I GYV NGL + L +
Sbjct: 248 ------------------------SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR---SREDLSISVGNALITM 250
F M G + T+ ++ + + ++ G+ +H+ ++ SRED N L+ M
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED---RFCNTLLDM 340
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y+K G +D+A+ VF + + VS++SMI A+ GL EA++LFE+M GI PD T
Sbjct: 341 YSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
VL+ C L+++G+ + + + + ++D+Y + G +QEA M
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKE-NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
Query: 371 PIEPDVIAWGSLLS--SCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
++ D+I+W +++ S Y N L+ LLL E S +A V AC
Sbjct: 459 RVK-DIISWNTIIGGYSKNCYANEALSLF---NLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 429 AAKIRKL 435
K R++
Sbjct: 515 FDKGREI 521
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 168 NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQ 227
+R V + + ++G ++A++L K P TL ++L + + SL GK+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 228 IHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG 287
+ + + ++G+ L MY G + A +VF+ + + W+ ++ LA+ G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK-ALFWNILMNELAKSG 174
Query: 288 LGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHY 347
+I LF+KM++ G+E D T+ V + + + V G + E S
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN-SVG 233
Query: 348 ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
++ Y + + A K + M E DVI+W S+++
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIIN 269
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 350/579 (60%), Gaps = 38/579 (6%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
++ +WN M+ ++ G++D AL F+QM +++++W +MI G +Q+ EAL+LF +
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
ML+ +K ++AC N ++G Q+H II+ F V +LI+ YA
Sbjct: 216 MLR-CCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANC- 273
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
++GD +R++FD + V WTA++ GY
Sbjct: 274 -----------------------------KRIGD---SRKVFDEKVHEQVAVWTALLSGY 301
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
N ++DAL +F M + PN T A+ L+ S +L+ GK++H A++ +
Sbjct: 302 SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDA 361
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
VGN+L+ MY+ +G++++A VF I + VSW+S+I+ AQHG G+ A +F +M+
Sbjct: 362 FVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMAS-VHKIEPTLSHYACMIDLYGRAGLL 360
L EPD IT+ G+LSAC+H G +E+GR F M+S ++ I+ + HY CM+D+ GR G L
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL 480
Query: 361 QEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVY 420
+EA + IE M ++P+ + W +LLS+C+++ +VD + AA + ++ +S AY L+N+Y
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 421 SACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIW 480
++ G+W + +K+R M G+ K+ GSSW+ I+ + H F + D P IY+ ++ +
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLR 598
Query: 481 EEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICN 540
E++K+LG+ PD S LHD+E E K+++L YHSE+LAIAFG+I+T E + + +MKNLR+C
Sbjct: 599 EKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCE 658
Query: 541 DCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
DCHT IK IS ++GREI++RD RFHHFK+G CSC DYW
Sbjct: 659 DCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 198/430 (46%), Gaps = 17/430 (3%)
Query: 10 IMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLK 69
++I H+ S RID A F Q+ + + MI GY + +AL LF M
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR---- 95
Query: 70 PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
D + S +S C +MN ++ + + S A+++ ++G V+ A R+
Sbjct: 96 -DVVSWNSMISGCVECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAERL 150
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
Q + D A+ +++ GY + G + A ++F + ++V++WT MI G QN + +
Sbjct: 151 FYQMPVK--DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE 208
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
AL+LF+ M + + S +++ + + + G Q+H I+ V +LIT
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLIT 268
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
YA I +++KVF+ + W++++ + + E+A+ +F ML I P+
Sbjct: 269 FYANCKRIGDSRKVFDEKV-HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQS 327
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T+ L++C+ +G ++ G+ + + +E ++ +Y +G + +A
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKL-GLETDAFVGNSLVVMYSDSGNVNDAVSVFIK 386
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLI--EPDNSGAYSALANVYSACGKWE 427
+ + +++W S++ C + A + +++ + EPD ++ L + S CG E
Sbjct: 387 I-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEI-TFTGLLSACSHCGFLE 444
Query: 428 DAAKIRKLMN 437
K+ M+
Sbjct: 445 KGRKLFYYMS 454
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 345/570 (60%), Gaps = 37/570 (6%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++S++ SGR++ A F ++ +R +VTW ++ +GY G +EA++LF M++ +KP
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVE-MGVKP 210
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D + + LSAC ++ +++ G+ I Y+ E + V+ L+++YAK G +E AR V
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV- 269
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
FDS+ +D+V W+ MI GY N +
Sbjct: 270 --------------------------------FDSMVEKDIVTWSTMIQGYASNSFPKEG 297
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS-ISVGNALIT 249
+ELF M +E +P+ F++ LS + +L+ G + S I E L+ + + NALI
Sbjct: 298 IELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALID 356
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MYAK G++ +VF + D V ++ I LA++G + + +F + LGI PD
Sbjct: 357 MYAKCGAMARGFEVFKEM-KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T++G+L C H GL++ G +FN ++ V+ ++ T+ HY CM+DL+GRAG+L +A++ I +
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
MP+ P+ I WG+LLS C++ K+ LA+ + L+ +EP N+G Y L+N+YS G+W++A
Sbjct: 476 MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEA 535
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFI 489
A++R +MN +G+KK G SW+E++ +VH F A+D HP D+IY ++ + E++ +GF+
Sbjct: 536 AEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFV 595
Query: 490 PDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFI 549
P T+ V D+E E K+++L YHSEKLA+A G+IST +R++KNLR+C DCH +K I
Sbjct: 596 PTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLI 655
Query: 550 SKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
SK+ REI+VRD RFH F +G CSC DYW
Sbjct: 656 SKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 183/390 (46%), Gaps = 49/390 (12%)
Query: 28 FQQMSERDIVTWNSMIAGY-NQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLE 86
F +I +NS+I G+ N H F E L+LF S ++ L FT L ACT
Sbjct: 68 FSHTQFPNIFLYNSLINGFVNNHLF-HETLDLFLS-IRKHGLYLHGFTFPLVLKACTRAS 125
Query: 87 NMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTAL 146
+ LG +HS +++ F+ A +L+S+Y+ +G + A ++ + EI D + +TAL
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFD--EIPDRSVVTWTAL 183
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNS 206
GY G R+R +A++LF+ M + G +P+S
Sbjct: 184 FSGYTTSG------------RHR-------------------EAIDLFKKMVEMGVKPDS 212
Query: 207 FTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS----VGNALITMYAKAGSIDNAQK 262
+ + +LS L+ G+ I ++ E++ + V L+ +YAK G ++ A+
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWI----VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
VF+ + D V+WS+MI A + +E IELF +ML ++PD + VG LS+C +G
Sbjct: 269 VFDSMV-EKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 323 LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
++ G +L+ H+ L +ID+Y + G + F+ + M E D++ +
Sbjct: 328 ALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAA 385
Query: 383 LSSCKVYKNVDL--AKIAAERLLLIEPDNS 410
+S +V L A L I PD S
Sbjct: 386 ISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 162 IFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGAS 221
+F + ++ + ++I G+V N L + L+LF ++ K G + FT +L +R +S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 222 LNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMII 281
G +H+ ++ + ++ +L+++Y+ +G +++A K+F+ I + V+W+++
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWTALFS 185
Query: 282 ALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIE 341
G EAI+LF+KM+ +G++PD V VLSAC HVG ++ G M + +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 342 PTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ +++LY + G +++A ++M +E D++ W +++
Sbjct: 246 NSFVR-TTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/554 (38%), Positives = 334/554 (60%), Gaps = 37/554 (6%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
+M E+++V+W +MI+ Y+Q G EAL +F+ M++ S KP++FT A+ L++C
Sbjct: 110 LDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR-SDGKPNEFTFATVLTSCIRASG 168
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+ LGKQIH I++ +D S I ++LL
Sbjct: 169 LGLGKQIHGLIVKWNYD----------------------------SHI-----FVGSSLL 195
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
D YAK G I AR+IF+ L RDVV+ TA+I GY Q GL+++ALE+F + EG PN
Sbjct: 196 DMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYV 255
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
T A++L+ S A L+HGKQ H +R + N+LI MY+K G++ A+++F+ +
Sbjct: 256 TYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKML-ALGIEPDHITYVGVLSACTHVGLVEQ 326
+SW++M++ ++HGLG E +ELF M ++PD +T + VLS C+H + +
Sbjct: 316 -PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDT 374
Query: 327 GRSYFN-LMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
G + F+ ++A + +P HY C++D+ GRAG + EAF+FI+ MP +P GSLL +
Sbjct: 375 GLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGA 434
Query: 386 CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQ 445
C+V+ +VD+ + RL+ IEP+N+G Y L+N+Y++ G+W D +R +M + V KE
Sbjct: 435 CRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEP 494
Query: 446 GSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKD 505
G SW++ + +H F A D HP+++E+ M +I ++K+ G++PD VL+D++ E K+
Sbjct: 495 GRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKE 554
Query: 506 KLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRF 565
K+L HSEKLA+ FG+I+T E +R+ KNLRIC DCH K SK+ RE+ +RD RF
Sbjct: 555 KMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRF 614
Query: 566 HHFKDGFCSCRDYW 579
H DG CSC DYW
Sbjct: 615 HQIVDGICSCGDYW 628
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 182/364 (50%), Gaps = 59/364 (16%)
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
L+AC + + G+++H+++I+T + L + Y +T
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRY---------LPATYLRT------------------ 91
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
LL Y K + AR++ D + ++VV+WTAMI Y Q G + +AL +F M
Sbjct: 92 ------RLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM 145
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
+ +PN FT A +L+ R + L GKQIH ++ D I VG++L+ MYAKAG I
Sbjct: 146 RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 205
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
A+++F + D VS +++I AQ GL EEA+E+F ++ + G+ P+++TY +L+A
Sbjct: 206 EAREIFECL-PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 319 THVGLVEQGRSYFNLMASVHKIEPTLSHYAC----MIDLYGRAGLLQEAFKFIENMPIEP 374
+ + L++ G+ A H + L YA +ID+Y + G L A + +NMP E
Sbjct: 265 SGLALLDHGKQ-----AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP-ER 318
Query: 375 DVIAWGSLLSSCKVYKNVDLAKIAAERLLL------IEPDNSGAYSALANVYSAC--GKW 426
I+W ++L Y L + E L ++PD A + LA V S C G+
Sbjct: 319 TAISWNAMLVG---YSKHGLGREVLELFRLMRDEKRVKPD---AVTLLA-VLSGCSHGRM 371
Query: 427 EDAA 430
ED
Sbjct: 372 EDTG 375
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 46/268 (17%)
Query: 5 ITSWNI---------MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEA 55
I WN ++ ++ +G+I A F+ + ERD+V+ ++IAGY Q G D+EA
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 56 LELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALIS 115
LE+F L + P+ T AS L+A + L ++ GKQ H +++R E +QN+LI
Sbjct: 239 LEMFHR-LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 116 MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWT 175
MY+K G + ARR+ + + + AI++ A+L GY+K
Sbjct: 298 MYSKCGNLSYARRLFDN--MPERTAISWNAMLVGYSK----------------------- 332
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
+GL + LELFR M E +P++ TL A+LS S G + G I +
Sbjct: 333 --------HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 235 SREDLSISVGN--ALITMYAKAGSIDNA 260
+ ++ M +AG ID A
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 192 ELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
E M GP A+L+ +L G+++HA I++R + + L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
K +++A+KV + + N VSW++MI +Q G EA+ +F +M+ +P+ T+
Sbjct: 98 GKCDCLEDARKVLDEMPEKN-VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 312 VGVLSAC---THVGLVEQ----------------GRSYFNLMASVHKIEPTLSHYACM-- 350
VL++C + +GL +Q G S ++ A +I+ + C+
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 351 ---------IDLYGRAGLLQEAFKFIENMPIE---PDVIAWGSLLSSCKVYKNVDLAKIA 398
I Y + GL +EA + + E P+ + + SLL++ +D K A
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 399 AERLLLIE-PDNSGAYSALANVYSACGKWEDAAKIRKLMNDR 439
+L E P + ++L ++YS CG A ++ M +R
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 318
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ G + A F M ER ++WN+M+ GY++HG +E LELF M + +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVA 126
KPD TL + LS C++ + G I ++ E+ ++ ++ M + G ++ A
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 127 RRVVEQ 132
+++
Sbjct: 413 FEFIKR 418
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 348/574 (60%), Gaps = 42/574 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQ--QMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDS 66
N +I+L+ R+ A F+ + ER IV+W ++++ Y Q+G EALE+FS M +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM-RKM 216
Query: 67 SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
+KPD L S L+A T L+++ G+ IH+ +++ +I + +L +MYAK
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC------ 270
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
G + A+ +FD +++ +++ W AMI GY +NG
Sbjct: 271 ---------------------------GQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS--REDLSISVG 244
+A+++F M + RP++ ++ + +S ++ SL + ++ RS R+D+ IS
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS-- 361
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+ALI M+AK GS++ A+ VF+ + D V WS+MI+ HG EAI L+ M G+
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTL-DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
P+ +T++G+L AC H G+V +G +FN MA HKI P HYAC+IDL GRAG L +A+
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
+ I+ MP++P V WG+LLS+CK +++V+L + AA++L I+P N+G Y L+N+Y+A
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAAR 539
Query: 425 KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
W+ A++R M ++G+ K+ G SW+E++ + F D HP+ +EI + ++ I +K
Sbjct: 540 LWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
Query: 485 KLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHT 544
+ GF+ + D+ LHDL E ++ L HSE++AIA+G+ISTP+ T LRI KNLR C +CH
Sbjct: 600 EGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHA 659
Query: 545 AIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDY 578
A K ISKL+ REI+VRD RFHHFKDG CSC DY
Sbjct: 660 ATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 189/366 (51%), Gaps = 37/366 (10%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAST 78
G I A F + I WN++I GY+++ ++AL ++S+M Q + + PD FT
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHL 125
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
L AC+ L ++ +G+ +H+ + R FD VQN LI++YAK + AR V E + +
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
+++TA++ YA+ G+ A +IF +R DV
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV--------------------------- 218
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
+P+ L ++L+ + L G+ IHAS ++ ++ + +L TMYAK G +
Sbjct: 219 ----KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
A+ +F+ + N + W++MI A++G EAI++F +M+ + PD I+ +SAC
Sbjct: 275 TAKILFDKMKSPN-LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Query: 319 THVGLVEQGRSYFNLMA-SVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVI 377
VG +EQ RS + + S ++ + +S + +ID++ + G ++ A + + + ++ DV+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGA-RLVFDRTLDRDVV 390
Query: 378 AWGSLL 383
W +++
Sbjct: 391 VWSAMI 396
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 165/339 (48%), Gaps = 45/339 (13%)
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
T L+ + GDIT ARQ+FD L + W A+I GY +N DAL ++ M
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
P+SFT +L S + L G+ +HA R D + V N LI +YAK + +A+ V
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 264 FNLICWNNDT-VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
F + T VSW++++ A AQ+G EA+E+F +M + ++PD + V VL+A T +
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 323 LVEQGRSYFNLMASVHK----IEPTL-----SHYA------------------------C 349
++QGRS + ASV K IEP L + YA
Sbjct: 237 DLKQGRS---IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 350 MIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE 406
MI Y + G +EA F + N + PD I+ S +S+C +++ A+ E + +
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 407 -PDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
D+ SAL ++++ CG E A +L+ DR + ++
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGA----RLVFDRTLDRD 388
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/569 (36%), Positives = 363/569 (63%), Gaps = 5/569 (0%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++M ID+A F + ++ N+M + Y + G +EAL +F+ M+ DS ++P
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM-DSGVRP 335
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D+ ++ S +S+C+ L N+ GK H Y++R F+ + NALI MY K + A R+
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
++ +S+ + + +++ GY + G++ A + F+++ +++V+W +I G VQ L ++A
Sbjct: 396 DR--MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 191 LELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
+E+F +M ++EG + T+ ++ S +L+ K I+ ++ L + +G L+
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
M+++ G ++A +FN + N D +W++ I A+A G E AIELF+ M+ G++PD +
Sbjct: 514 MFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
+VG L+AC+H GLV+QG+ F M +H + P HY CM+DL GRAGLL+EA + IE+
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
MP+EP+ + W SLL++C+V NV++A AAE++ ++ P+ +G+Y L+NVY++ G+W D
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 692
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFI 489
AK+R M ++G++K G+S ++I+ + H F + D HP+ I M+D++ + LG +
Sbjct: 693 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 752
Query: 490 PDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFI 549
PD +VL D++ + K +L HSEKLA+A+G+IS+ + TT+RI+KNLR+C+DCH+ KF
Sbjct: 753 PDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFA 812
Query: 550 SKLMGREIIVRDVTRFHHFKDGFCSCRDY 578
SK+ REII+RD RFH+ + G CSC D+
Sbjct: 813 SKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 193/402 (48%), Gaps = 66/402 (16%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ + G +D A F +MSER++V+W SMI GY + F K+A++LF M++D +
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P+ T+ +SAC LE++ G++++++I + +++ + +AL+ MY K ++VA+R
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ ++ S+LD AM YV+ GL
Sbjct: 293 LFDEYGASNLDLC---------------------------------NAMASNYVRQGLTR 319
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+AL +F M G RP+ ++ + +S S+ ++ GK H +R+ + ++ NALI
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 249 TMYAKAGSIDNAQKVFN------LICWNN------------------------DTVSWSS 278
MY K D A ++F+ ++ WN+ + VSW++
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 279 MIIALAQHGLGEEAIELFEKMLAL-GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASV 337
+I L Q L EEAIE+F M + G+ D +T + + SAC H+G ++ + + +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK- 498
Query: 338 HKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
+ I+ + ++D++ R G + A I N DV AW
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMS-IFNSLTNRDVSAW 539
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 172/358 (48%), Gaps = 38/358 (10%)
Query: 39 WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
+NS+I GY G EA+ LF M+ +S + PDK+T LSAC G QIH I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 99 IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITP 158
++ + VQN+L+ YA+ G ++ AR+V + E+S+ + +++T
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFD--EMSERNVVSWT-------------- 204
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTK-EGPRPNSFTLAAMLSVSS 217
+MI GY + DA++LF M + E PNS T+ ++S +
Sbjct: 205 -----------------SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 218 RGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWS 277
+ L G++++A S +++ + +AL+ MY K +ID A+++F+ +N + +
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC-N 306
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASV 337
+M + GL EA+ +F M+ G+ PD I+ + +S+C+ + + G+S +
Sbjct: 307 AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR- 365
Query: 338 HKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
+ E + +ID+Y + AF+ + M V+ W S+++ VD A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAA 422
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 158/360 (43%), Gaps = 77/360 (21%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+++ +WN +++ ++ +G +D A F+ M E++IV+WN++I+G Q +EA+E+F SM
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ D T+ S SAC +L ++L K I+ YI + + + L+ M+++
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC-- 518
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
GD A IF+SL NRDV AWTA I
Sbjct: 519 -------------------------------GDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR----SRED 238
G + A+ELF M ++G +P+ L+ S G + GK+I S ++ S ED
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 239 LSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
V + M+ L + GL EEA++L E
Sbjct: 608 -----------------------------------VHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 299 MLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG 358
M +EP+ + + +L+AC G VE +Y V E T S Y + ++Y AG
Sbjct: 633 M---PMEPNDVIWNSLLAACRVQGNVEMA-AYAAEKIQVLAPERTGS-YVLLSNVYASAG 687
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 163/344 (47%), Gaps = 40/344 (11%)
Query: 137 DLDAIAFTALLDGYAKLG---DITPARQIFDSLRNRDVV-AWTAMIVGYVQNGLNDDALE 192
D D T L+ +LG ++ A+++F++ + + ++I GY +GL ++A+
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 193 LFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYA 252
LF M G P+ +T LS ++ + +G QIH ++ + V N+L+ YA
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA 180
Query: 253 KAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA-LGIEPDHITY 311
+ G +D+A+KVF+ + N VSW+SMI A+ ++A++LF +M+ + P+ +T
Sbjct: 181 ECGELDSARKVFDEMSERN-VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 312 VGVLSACTHVGLVEQGRSYF-----------NLMAS-----------VHKIEPTLSHY-A 348
V V+SAC + +E G + +LM S + + Y A
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 349 CMIDL-------YGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIA 398
+DL Y R GL +EA F + + + PD I+ S +SSC +N+ K
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 399 AERLLLIEPDN-SGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
+L ++ +AL ++Y C + + A +I M+++ V
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 355/598 (59%), Gaps = 48/598 (8%)
Query: 22 DLALAQ--FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
D+A A+ F ++ ER+++ N MI Y +GF E +++F +M +++PD +T L
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVL 147
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
AC+ + +G++IH + + V N L+SMY K G + AR V++ E+S D
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD--EMSRRD 205
Query: 140 AIAFTALLDGYAK-------------------------LGDITPA------------RQI 162
+++ +L+ GYA+ + + PA + +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDM 265
Query: 163 FDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASL 222
F + + +V+W MI Y++N + +A+EL+ M +G P++ ++ ++L ++L
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 223 NHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIA 282
+ GK+IH R + ++ + NALI MYAK G ++ A+ VF + + D VSW++MI A
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM-KSRDVVSWTAMISA 384
Query: 283 LAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP 342
G G +A+ LF K+ G+ PD I +V L+AC+H GL+E+GRS F LM +KI P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 343 TLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERL 402
L H ACM+DL GRAG ++EA++FI++M +EP+ WG+LL +C+V+ + D+ +AA++L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 403 LLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAE 462
+ P+ SG Y L+N+Y+ G+WE+ IR +M +G+KK G+S +E+ +H F
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVG 564
Query: 463 DSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGII 522
D HPQ DEIY+ +D + +++K+LG++PD++S LHD+E E K+ L HSEKLAI F ++
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALM 624
Query: 523 STPE-----NTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSC 575
+T E N T+RI KNLRIC DCH A K IS++ REII+RD RFH F+ G CSC
Sbjct: 625 NTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 16/304 (5%)
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
L+ YA L D+ AR++FD + R+V+ MI YV NG + +++F M RP+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
+T +L S ++ G++IH SA + ++ VGN L++MY K G + A+ V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGL-- 323
+ D VSW+S+++ AQ+ ++A+E+ +M ++ I D T +L A ++
Sbjct: 200 EMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWG 380
V + F M + +L + MI +Y + + EA + M EPD ++
Sbjct: 259 VMYVKDMFFKMG-----KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 381 SLLSSCKVYKNVDLAKIA---AERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMN 437
S+L +C + L K ER LI N +AL ++Y+ CG E A + + M
Sbjct: 314 SVLPACGDTSALSLGKKIHGYIERKKLIP--NLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 438 DRGV 441
R V
Sbjct: 372 SRDV 375
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 150/356 (42%), Gaps = 63/356 (17%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++S++ G + A +MS RD+V+WNS++ GY Q+ +ALE+ M + +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKI 237
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDI---SGAVQNALISMYAKTG---- 121
D T+AS L A +N N+ Y+ F + S N +I +Y K
Sbjct: 238 SHDAGTMASLLPAVSNTTTENV-----MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 122 GVEVARRVVEQSEISDLDAIAFT-----------------------------------AL 146
VE+ R+ +++ + DA++ T AL
Sbjct: 293 AVELYSRM--EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNS 206
+D YAK G + AR +F+++++RDVV+WTAMI Y +G DA+ LF + G P+S
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 410
Query: 207 FTLAAMLSVSSRGASLNHGKQI------HASAIRSREDLSISVGNALITMYAKAGSIDNA 260
L+ S L G+ H E L+ ++ + +AG + A
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA-----CMVDLLGRAGKVKEA 465
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLS 316
+ + + W +++ A H + + +K+ L P+ Y +LS
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA--PEQSGYYVLLS 519
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 197 MTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGS 256
+ ++ P+ F L +L +L + +H+ I + S+G L+ YA
Sbjct: 33 LDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKD 89
Query: 257 IDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLS 316
+ +A+KVF+ I N + + MI + +G E +++F M + PDH T+ VL
Sbjct: 90 VASARKVFDEIPERN-VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 317 ACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDV 376
AC+ G + GR V + TL ++ +YG+ G L EA ++ M DV
Sbjct: 149 ACSCSGTIVIGRKIHGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDV 206
Query: 377 IAWGSLL 383
++W SL+
Sbjct: 207 VSWNSLV 213
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 355/598 (59%), Gaps = 48/598 (8%)
Query: 22 DLALAQ--FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
D+A A+ F ++ ER+++ N MI Y +GF E +++F +M +++PD +T L
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVL 147
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
AC+ + +G++IH + + V N L+SMY K G + AR V++ E+S D
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD--EMSRRD 205
Query: 140 AIAFTALLDGYAK-------------------------LGDITPA------------RQI 162
+++ +L+ GYA+ + + PA + +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDM 265
Query: 163 FDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASL 222
F + + +V+W MI Y++N + +A+EL+ M +G P++ ++ ++L ++L
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 223 NHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIA 282
+ GK+IH R + ++ + NALI MYAK G ++ A+ VF + + D VSW++MI A
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM-KSRDVVSWTAMISA 384
Query: 283 LAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP 342
G G +A+ LF K+ G+ PD I +V L+AC+H GL+E+GRS F LM +KI P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 343 TLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERL 402
L H ACM+DL GRAG ++EA++FI++M +EP+ WG+LL +C+V+ + D+ +AA++L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 403 LLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAE 462
+ P+ SG Y L+N+Y+ G+WE+ IR +M +G+KK G+S +E+ +H F
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVG 564
Query: 463 DSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGII 522
D HPQ DEIY+ +D + +++K+LG++PD++S LHD+E E K+ L HSEKLAI F ++
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALM 624
Query: 523 STPE-----NTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSC 575
+T E N T+RI KNLRIC DCH A K IS++ REII+RD RFH F+ G CSC
Sbjct: 625 NTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 16/304 (5%)
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
L+ YA L D+ AR++FD + R+V+ MI YV NG + +++F M RP+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
+T +L S ++ G++IH SA + ++ VGN L++MY K G + A+ V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGL-- 323
+ D VSW+S+++ AQ+ ++A+E+ +M ++ I D T +L A ++
Sbjct: 200 EMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWG 380
V + F M + +L + MI +Y + + EA + M EPD ++
Sbjct: 259 VMYVKDMFFKMG-----KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 381 SLLSSCKVYKNVDLAKIA---AERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMN 437
S+L +C + L K ER LI N +AL ++Y+ CG E A + + M
Sbjct: 314 SVLPACGDTSALSLGKKIHGYIERKKLIP--NLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 438 DRGV 441
R V
Sbjct: 372 SRDV 375
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 150/356 (42%), Gaps = 63/356 (17%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++S++ G + A +MS RD+V+WNS++ GY Q+ +ALE+ M + +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKI 237
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDI---SGAVQNALISMYAKTG---- 121
D T+AS L A +N N+ Y+ F + S N +I +Y K
Sbjct: 238 SHDAGTMASLLPAVSNTTTENV-----MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 122 GVEVARRVVEQSEISDLDAIAFT-----------------------------------AL 146
VE+ R+ +++ + DA++ T AL
Sbjct: 293 AVELYSRM--EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNS 206
+D YAK G + AR +F+++++RDVV+WTAMI Y +G DA+ LF + G P+S
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 410
Query: 207 FTLAAMLSVSSRGASLNHGKQI------HASAIRSREDLSISVGNALITMYAKAGSIDNA 260
L+ S L G+ H E L+ ++ + +AG + A
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA-----CMVDLLGRAGKVKEA 465
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLS 316
+ + + W +++ A H + + +K+ L P+ Y +LS
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA--PEQSGYYVLLS 519
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 197 MTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGS 256
+ ++ P+ F L +L +L + +H+ I + S+G L+ YA
Sbjct: 33 LDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKD 89
Query: 257 IDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLS 316
+ +A+KVF+ I N + + MI + +G E +++F M + PDH T+ VL
Sbjct: 90 VASARKVFDEIPERN-VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 317 ACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDV 376
AC+ G + GR V + TL ++ +YG+ G L EA ++ M DV
Sbjct: 149 ACSCSGTIVIGRKIHGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDV 206
Query: 377 IAWGSLL 383
++W SL+
Sbjct: 207 VSWNSLV 213
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/575 (38%), Positives = 337/575 (58%), Gaps = 41/575 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I ++ + G +D A F + +R I WN++ G +E L L+ M ++
Sbjct: 118 LIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM-NRIGVES 176
Query: 71 DKFTLASTLSACTNLE----NMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
D+FT L AC E ++ GK+IH+++ R + + L+ MYA+ G V+ A
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA 236
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
V F + R+VV+W+AMI Y +NG
Sbjct: 237 SYV---------------------------------FGGMPVRNVVSWSAMIACYAKNGK 263
Query: 187 NDDALELFRAMTKEGP--RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
+AL FR M +E PNS T+ ++L + A+L GK IH +R D + V
Sbjct: 264 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 323
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+AL+TMY + G ++ Q+VF+ + + D VSW+S+I + HG G++AI++FE+MLA G
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA 382
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
P +T+V VL AC+H GLVE+G+ F M H I+P + HYACM+DL GRA L EA
Sbjct: 383 SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAA 442
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
K +++M EP WGSLL SC+++ NV+LA+ A+ RL +EP N+G Y LA++Y+
Sbjct: 443 KMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQ 502
Query: 425 KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
W++ +++KL+ RG++K G W+E++ +++ F + D +P ++I+ + K+ E++K
Sbjct: 503 MWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562
Query: 485 KLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHT 544
+ G+IP T VL++LE E K++++ HSEKLA+AFG+I+T + +RI KNLR+C DCH
Sbjct: 563 EKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHL 622
Query: 545 AIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
KFISK M +EI+VRDV RFH FK+G CSC DYW
Sbjct: 623 FTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 130/262 (49%), Gaps = 13/262 (4%)
Query: 136 SDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFR 195
SD D T L+ Y+ LG + AR++FD R R + W A+ G ++ L L+
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 196 AMTKEGPRPNSFTLAAMLSVS-SRGASLNH---GKQIHASAIRSREDLSISVGNALITMY 251
M + G + FT +L + ++NH GK+IHA R + + L+ MY
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY 227
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML--ALGIEPDHI 309
A+ G +D A VF + N VSWS+MI A++G EA+ F +M+ P+ +
Sbjct: 228 ARFGCVDYASYVFGGMPVRN-VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 310 TYVGVLSACTHVGLVEQGR--SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
T V VL AC + +EQG+ + L + I P +S ++ +YGR G L+ +
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVIS---ALVTMYGRCGKLEVGQRVF 343
Query: 368 ENMPIEPDVIAWGSLLSSCKVY 389
+ M + DV++W SL+SS V+
Sbjct: 344 DRMH-DRDVVSWNSLISSYGVH 364
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 118/291 (40%), Gaps = 44/291 (15%)
Query: 192 ELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
+ R +++E P+ T ++ +SL+ ++H + + D + LI MY
Sbjct: 64 QAIRVLSQESS-PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMY 122
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
+ GS+D A+KVF+ W+++ AL G GEE + L+ KM +G+E D TY
Sbjct: 123 SDLGSVDYARKVFDKT-RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Query: 312 VGVLSACT---------------HVGLVEQGRS--------------------YFNLMAS 336
VL AC H L +G S Y + +
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFG 241
Query: 337 VHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE-----PDVIAWGSLLSSCKVYKN 391
+ +S ++ MI Y + G EA + M E P+ + S+L +C
Sbjct: 242 GMPVRNVVS-WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 392 VDLAKIAAERLLLIEPDN-SGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
++ K+ +L D+ SAL +Y CGK E ++ M+DR V
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDV 351
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/577 (37%), Positives = 342/577 (59%), Gaps = 34/577 (5%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + SWN+M++ + G ++ A F +M+E+D +W +M+ GY + +EAL L+S M
Sbjct: 149 RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLM 208
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ + +P+ FT++ ++A ++ + GK+IH +I+R D + ++L+ MY K G
Sbjct: 209 QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGC 268
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
++ AR + ++ I + D +++T+++D Y F S R R
Sbjct: 269 IDEARNIFDK--IVEKDVVSWTSMIDRY------------FKSSRWR------------- 301
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+ LF + RPN +T A +L+ + + GKQ+H R D
Sbjct: 302 ------EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
++L+ MY K G+I++A+ V + C D VSW+S+I AQ+G +EA++ F+ +L
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDG-CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
G +PDH+T+V VLSACTH GLVE+G +F + H++ T HY C++DL R+G ++
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ 474
Query: 363 AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSA 422
I MP++P W S+L C Y N+DLA+ AA+ L IEP+N Y +AN+Y+A
Sbjct: 475 LKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAA 534
Query: 423 CGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEE 482
GKWE+ K+RK M + GV K GSSW EI+ + H+F A D+ HP ++I + + ++ ++
Sbjct: 535 AGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKK 594
Query: 483 IKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDC 542
+K+ G++P T VLHD+E E K++ L YHSEKLA+AF I+ST E T +++ KNLR C DC
Sbjct: 595 MKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDC 654
Query: 543 HTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
H AIKFIS + R+I VRD TRFH F++G CSC DYW
Sbjct: 655 HGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 191/372 (51%), Gaps = 13/372 (3%)
Query: 53 KEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNA 112
+EA++L + KP T + + C+ + GK++H +I + F + N
Sbjct: 71 REAVQLLGR-----AKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 113 LISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV 172
L+ MYAK G + AR+V + E+ + D ++ +++GYA++G + AR++FD + +D
Sbjct: 126 LLRMYAKCGSLVDARKVFD--EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS 231
+WTAM+ GYV+ ++AL L+ M + RPN FT++ ++ ++ + GK+IH
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 232 AIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEE 291
+R+ D + ++L+ MY K G ID A+ +F+ I D VSW+SMI + E
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV-EKDVVSWTSMIDRYFKSSRWRE 302
Query: 292 AIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMI 351
LF +++ P+ T+ GVL+AC + E G+ M V +P + ++
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLV 361
Query: 352 DLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSG 411
D+Y + G ++ A ++ P +PD+++W SL+ C D A + LL++
Sbjct: 362 DMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFD--LLLKSGTKP 418
Query: 412 AYSALANVYSAC 423
+ NV SAC
Sbjct: 419 DHVTFVNVLSAC 430
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/577 (40%), Positives = 352/577 (61%), Gaps = 38/577 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSE-RDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
N ++ + G + A++ F M E RD V+WNSMI Y QH +AL L+ M+
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF-KG 235
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
K D FTLAS L+A T+L+++ G+Q H +I+ F + V + LI Y+K GG
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC---- 291
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG-L 186
DG + + ++F + + D+V W MI GY N L
Sbjct: 292 --------------------DG------MYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR-EDLSISVGN 245
+++A++ FR M + G RP+ + + S S +S + KQIH AI+S ISV N
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
ALI++Y K+G++ +A+ VF+ + N VS++ MI AQHG G EA+ L+++ML GI
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELN-AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
P+ IT+V VLSAC H G V++G+ YFN M KIEP HY+CMIDL GRAG L+EA +
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
FI+ MP +P +AW +LL +C+ +KN+ LA+ AA L++++P + Y LAN+Y+ K
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARK 564
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKK 485
WE+ A +RK M + ++K+ G SW+E++ + H+F AED HP E+ + ++++ +++KK
Sbjct: 565 WEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKK 624
Query: 486 LGFIPDTD-SVLHDLEIEVKDKLLR--YHSEKLAIAFGIISTPENTTLRIMKNLRICNDC 542
+G++ D +++ + E D+ +R +HSEKLA+AFG++ST + L ++KNLRIC DC
Sbjct: 625 VGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDC 684
Query: 543 HTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
H AIKF+S + GREIIVRD RFH FKDG CSC DYW
Sbjct: 685 HNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 214/441 (48%), Gaps = 44/441 (9%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++ S+N+++ + +I +A F ++ + D V++N++I+GY A+ LF M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM- 131
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+ + D FTL+ ++AC + ++L KQ+H + + FD +V NA ++ Y+K G
Sbjct: 132 RKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG-- 187
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
+ R V S +D + RD V+W +MIV Y Q
Sbjct: 188 -LLREAV--SVFYGMDEL---------------------------RDEVSWNSMIVAYGQ 217
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
+ AL L++ M +G + + FTLA++L+ + L G+Q H I++ + V
Sbjct: 218 HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 244 GNALITMYAKAGSID---NAQKVFNLICWNNDTVSWSSMIIALAQH-GLGEEAIELFEKM 299
G+ LI Y+K G D +++KVF I + D V W++MI + + L EEA++ F +M
Sbjct: 278 GSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
+G PD ++V V SAC+++ Q + L H +S +I LY ++G
Sbjct: 337 QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGN 396
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL--LIEPDNSGAYSALA 417
LQ+A + MP E + +++ ++ + + A + +R+L I P N + A+
Sbjct: 397 LQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP-NKITFVAVL 454
Query: 418 NVYSACGKWEDAAKIRKLMND 438
+ + CGK ++ + M +
Sbjct: 455 SACAHCGKVDEGQEYFNTMKE 475
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 173/355 (48%), Gaps = 24/355 (6%)
Query: 91 GKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGY 150
GK +H+ +++ S + N +++Y+K G + AR +E + + ++ ++ Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTE--EPNVFSYNVIVKAY 84
Query: 151 AKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
AK I ARQ+FD + D V++ +I GY A+ LF+ M K G + FTL+
Sbjct: 85 AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
+++ L KQ+H ++ D SV NA +T Y+K G + A VF +
Sbjct: 145 GLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 271 NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSY 330
D VSW+SMI+A QH G +A+ L+++M+ G + D T VL+A T + + GR +
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 331 FN--LMASVHKIEPTLSHYACMIDLYGRAG---LLQEAFKFIENMPIEPDVIAWGSLLSS 385
+ A H+ S +ID Y + G + ++ K + + + PD++ W +++S
Sbjct: 263 HGKLIKAGFHQNSHVGSG---LIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISG 318
Query: 386 CKVYKNVDLAKIAAERLLLIE-----PDNSGAYSALANVYSACGKWEDAAKIRKL 435
+ N +L++ A + ++ PD+ + V SAC ++ +++
Sbjct: 319 YSM--NEELSEEAVKSFRQMQRIGHRPDD----CSFVCVTSACSNLSSPSQCKQI 367
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/631 (36%), Positives = 360/631 (57%), Gaps = 57/631 (9%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ SWN ++S ++ + I A F+ M ER++V+W +M+ GY Q G EA LF M
Sbjct: 77 RNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM 136
Query: 63 LQ-------------------DSSLKPDKFTLASTLSACTNLEN--MNLGKQIHSYIIRT 101
+ D + K + A TN+ G+ + +I
Sbjct: 137 PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFD 196
Query: 102 EFDISGAVQ-NALISMYAKTGGVEVARRVVE----QSEIS---------------DLD-- 139
E V +I+ Y + V+VAR++ E ++E+S D +
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 140 --------AIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDAL 191
IA A++ G+ ++G+I+ AR++FD + +RD W MI Y + G +AL
Sbjct: 257 FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEAL 316
Query: 192 ELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
+LF M K+G RP+ +L ++LSV + ASL +G+Q+HA +R + D + V + L+TMY
Sbjct: 317 DLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMY 376
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
K G + A+ VF+ + D + W+S+I A HGLGEEA+++F +M + G P+ +T
Sbjct: 377 VKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTL 435
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP 371
+ +L+AC++ G +E+G F M S + PT+ HY+C +D+ GRAG + +A + IE+M
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495
Query: 372 IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAK 431
I+PD WG+LL +CK + +DLA++AA++L EPDN+G Y L+++ ++ KW D A
Sbjct: 496 IKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAV 555
Query: 432 IRKLMNDRGVKKEQGSSWLEIQNEVHIF---GAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
+RK M V K G SW+E+ +VH+F G ++ HP++ I M++K +++ G+
Sbjct: 556 VRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKN--HPEQAMILMMLEKTDGLLREAGY 613
Query: 489 IPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKF 548
PD VLHD++ E K L HSE+LA+A+G++ PE +R+MKNLR+C DCH AIK
Sbjct: 614 SPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKL 673
Query: 549 ISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
ISK+ REII+RD RFHHF +G CSCRDYW
Sbjct: 674 ISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 209/446 (46%), Gaps = 35/446 (7%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ ++I SWN ++S + ++G A F +MSER++V+WN +++GY ++ EA +F
Sbjct: 44 QFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFE 103
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEF-DISGAVQNALISMYAK 119
M P++ ++ T ++ +G+ + E ++S V +
Sbjct: 104 LM-------PERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV---MFGGLID 153
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIV 179
G ++ AR++ + + D+ +A T ++ G + G + AR IFD +R R+VV WT MI
Sbjct: 154 DGRIDKARKLYDMMPVKDV--VASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMIT 211
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
GY QN D A +LF M P + +ML + + ++
Sbjct: 212 GYRQNNRVDVARKLFEVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK---- 263
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
+ NA+I + + G I A++VF+L+ + D +W MI A + G EA++LF +M
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLM-EDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
G+ P + + +LS C + ++ GR + + + + + ++ +Y + G
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC-QFDDDVYVASVLMTMYVKCGE 381
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYS---AL 416
L +A K + + D+I W S++S Y + L + A + + E +SG L
Sbjct: 382 LVKA-KLVFDRFSSKDIIMWNSIISG---YASHGLGEEALK--IFHEMPSSGTMPNKVTL 435
Query: 417 ANVYSAC---GKWEDAAKIRKLMNDR 439
+ +AC GK E+ +I + M +
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESK 461
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 157/361 (43%), Gaps = 43/361 (11%)
Query: 111 NALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRD 170
N+++S Y G + AR++ + E+S+ + +++ L+ GY K I AR +F+ + R+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFD--EMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 171 VVAWTAMIVGYVQNGLNDDALELFRAMTK---------------EGPRPNSFTLAAMLSV 215
VV+WTAM+ GY+Q G+ +A LF M + +G + L M+ V
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV 169
Query: 216 SSRGASLN-------HGKQIHASAIRSR-EDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
AS N G+ A I + ++ +IT Y + +D A+K+F ++
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 229
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+ VSW+SM++ G E+A E FE M + + VG VG + +
Sbjct: 230 PEKTE-VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF----GEVGEISKA 284
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLS 384
R F+LM + + MI Y R G EA M + P + S+LS
Sbjct: 285 RRVFDLMEDRDN-----ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 385 SCKVYKNVDLAKIAAERLLLIE-PDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKK 443
C ++ + L+ + D+ S L +Y CG+ A KL+ DR K
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA----KLVFDRFSSK 395
Query: 444 E 444
+
Sbjct: 396 D 396
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 55/287 (19%)
Query: 151 AKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
+++G I AR+ FDSL+ + + +W +++ GY NGL +A +LF M++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER---------- 77
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
++ N L++ Y K I A+ VF L+
Sbjct: 78 -----------------------------NVVSWNGLVSGYIKNRMIVEARNVFELMPER 108
Query: 271 NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSY 330
N VSW++M+ Q G+ EA LF +M E + +++ + G +++ R
Sbjct: 109 N-VVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKL 163
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
+++M + T MI R G + EA + M E +V+ W ++++ +
Sbjct: 164 YDMMPVKDVVAST-----NMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGYRQNN 217
Query: 391 NVDLAKIAAERLLLIEPDNSG-AYSALANVYSACGKWEDAAKIRKLM 436
VD+A+ +L + P+ + +++++ Y+ G+ EDA + ++M
Sbjct: 218 RVDVAR----KLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 336/580 (57%), Gaps = 36/580 (6%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFS 60
R ++ S NI+I+ ++ +G + A F +M +R + TWN+MIAG Q F++E L LF
Sbjct: 21 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 80
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M PD++TL S S L ++++G+QIH Y I+ ++ V ++L MY +
Sbjct: 81 EM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G ++ V+ S+ R++VAW +I+G
Sbjct: 140 GKLQDGEIVIR---------------------------------SMPVRNLVAWNTLIMG 166
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
QNG + L L++ M G RPN T +LS S A G+QIHA AI+
Sbjct: 167 NAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSV 226
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
++V ++LI+MY+K G + +A K F+ + D V WSSMI A HG G+EAIELF M
Sbjct: 227 VAVVSSLISMYSKCGCLGDAAKAFSER-EDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 285
Query: 301 -ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
+E + + ++ +L AC+H GL ++G F++M + +P L HY C++DL GRAG
Sbjct: 286 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANV 419
L +A I +MPI+ D++ W +LLS+C ++KN ++A+ + +L I+P++S Y LANV
Sbjct: 346 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANV 405
Query: 420 YSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
+++ +W D +++RK M D+ VKKE G SW E + EVH F D + EIY + ++
Sbjct: 406 HASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKEL 465
Query: 480 WEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRIC 539
E+K G+ PDT SVLHD++ E K+ L HSEKLA+AF ++ PE +RI+KNLR+C
Sbjct: 466 TLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVC 525
Query: 540 NDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+DCH A K+IS + REI +RD +RFHHF +G CSC DYW
Sbjct: 526 SDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/525 (41%), Positives = 330/525 (62%), Gaps = 36/525 (6%)
Query: 55 ALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALI 114
+LE M+ +L+PD L S +C L ++G+ +H ++T +D
Sbjct: 100 SLEFLKKMMA-GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA--------- 149
Query: 115 SMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAW 174
D ++L+D YAK G+I AR++FD + R+VV W
Sbjct: 150 ------------------------DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTW 185
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
+ M+ GY Q G N++AL LF+ E N ++ ++++SV + L G+QIH +I+
Sbjct: 186 SGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIK 245
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIE 294
S D S VG++L+++Y+K G + A +VFN + N + W++M+ A AQH ++ IE
Sbjct: 246 SSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGI-WNAMLKAYAQHSHTQKVIE 304
Query: 295 LFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLY 354
LF++M G++P+ IT++ VL+AC+H GLV++GR YF+ M +IEPT HYA ++D+
Sbjct: 305 LFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE-SRIEPTDKHYASLVDML 363
Query: 355 GRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYS 414
GRAG LQEA + I NMPI+P WG+LL+SC V+KN +LA AA+++ + P +SG +
Sbjct: 364 GRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHI 423
Query: 415 ALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYK 474
+L+N Y+A G++EDAAK RKL+ DRG KKE G SW+E +N+VH F A + H + EIY+
Sbjct: 424 SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYE 483
Query: 475 MMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMK 534
+ ++ EE++K G+I DT VL +++ + K++ +RYHSE+LAIAFG+I+ P + +R+MK
Sbjct: 484 KLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMK 543
Query: 535 NLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
NLR+C DCH AIKF+S R IIVRD RFH F+DG CSC DYW
Sbjct: 544 NLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 34/293 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G I A F +M +R++VTW+ M+ GY Q G ++EAL LF L ++ L
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN-LAV 215
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ ++ +S +S C N + LG+QIH I++ FD S V ++L+S+Y+K G E
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE------ 269
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
A Q+F+ + +++ W AM+ Y Q+
Sbjct: 270 ---------------------------GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKV 302
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
+ELF+ M G +PN T +L+ S ++ G+ SR + + +L+ M
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
+AG + A +V + + W +++ + H E A +K+ LG
Sbjct: 363 LGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELG 415
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 91 GKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGY 150
G Q+H Y++++ + V N LI+ Y+K+ +RR E S
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP---------------- 77
Query: 151 AKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
+ W+++I + QN L +LE + M RP+ L
Sbjct: 78 -----------------QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLP 120
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
+ + + + G+ +H ++++ D + VG++L+ MYAK G I A+K+F+ +
Sbjct: 121 SATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQR 180
Query: 271 NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSY 330
N V+WS M+ AQ G EEA+ LF++ L + + ++ V+S C + L+E GR
Sbjct: 181 N-VVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI 239
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
L + + ++ LY + G+ + A++ +P++ ++ W ++L +
Sbjct: 240 HGLSIKSSFDSSSFVGSS-LVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKA 292
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/552 (39%), Positives = 340/552 (61%), Gaps = 12/552 (2%)
Query: 34 RDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQ 93
R+ W ++I GY G EA+ ++ M ++ + P FT ++ L AC ++++NLG+Q
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEE-ITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 94 IHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKL 153
H+ R V N +I MY K ++ AR+V + E+ + D I++T L+ YA++
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFD--EMPERDVISWTELIAAYARV 228
Query: 154 GDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAML 213
G++ A ++F+SL +D+VAWTAM+ G+ QN +ALE F M K G R + T+A +
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYI 288
Query: 214 SVSSR-GAS--LNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
S ++ GAS + QI + S D + +G+ALI MY+K G+++ A VF + N
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPSD-HVVIGSALIDMYSKCGNVEEAVNVF--MSMN 345
Query: 271 NDTV-SWSSMIIALAQHGLGEEAIELFEKMLA-LGIEPDHITYVGVLSACTHVGLVEQGR 328
N V ++SSMI+ LA HG +EA+ LF M+ I+P+ +T+VG L AC+H GLV+QGR
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 329 SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV 388
F+ M ++PT HY CM+DL GR G LQEA + I+ M +EP WG+LL +C++
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 389 YKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
+ N ++A+IAAE L +EPD G Y L+NVY++ G W ++RKL+ ++G+KK S
Sbjct: 466 HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Query: 449 WLEIQN-EVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKL 507
W+ +N ++H F + HP ++I ++++ E + LG+ PD SV +D+ K +
Sbjct: 526 WVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLI 585
Query: 508 LRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHH 567
L H+EKLA+AF +++T ++T+ IMKNLR+C DCH ++ S++ G+ II+RD RFHH
Sbjct: 586 LIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHH 645
Query: 568 FKDGFCSCRDYW 579
F+ G CSC D+W
Sbjct: 646 FRSGDCSCGDFW 657
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 148/341 (43%), Gaps = 66/341 (19%)
Query: 74 TLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
+L S L C NL + KQIH +++R D S + LI K G
Sbjct: 51 SLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLG------------ 95
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
+D YA R++ + ++ R+ WTA+I GY G D+A+ +
Sbjct: 96 -----------VPMDPYA--------RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAM 136
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
+ M KE P SFT +A+L LN G+Q HA R R + VGN +I MY K
Sbjct: 137 YGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVK 196
Query: 254 AGSIDNAQKVF------NLICW------------------------NNDTVSWSSMIIAL 283
SID A+KVF ++I W D V+W++M+
Sbjct: 197 CESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGF 256
Query: 284 AQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG-RSYFNLMASVHKIEP 342
AQ+ +EA+E F++M GI D +T G +SAC +G + R+ S +
Sbjct: 257 AQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSD 316
Query: 343 TLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ + +ID+Y + G ++EA +M +V + S++
Sbjct: 317 HVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMI 356
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 12/229 (5%)
Query: 221 SLNHGKQIHASAIRSREDLSISVGNALITMYAKAG-SIDN-AQKVFNLICWNNDTVSWSS 278
+LN KQIH +R D S + LI K G +D A++V + + N + W++
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFL-WTA 119
Query: 279 MIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVH 338
+I A G +EAI ++ M I P T+ +L AC + + GR + A
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH---AQTF 176
Query: 339 KIEPTLSHYA--CMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAK 396
++ Y MID+Y + + A K + MP E DVI+W L+++ Y V +
Sbjct: 177 RLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAA---YARVGNME 232
Query: 397 IAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQ 445
AAE + + A++A+ ++ K ++A + M G++ ++
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I ++ G ++ A+ F M+ +++ T++SMI G HG +EAL LF M+ + +KP
Sbjct: 324 LIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKP 383
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVARR 128
+ T L AC++ ++ G+Q+ + +T F + + ++ + +TG ++ A
Sbjct: 384 NTVTFVGALMACSHSGLVDQGRQVFDSMYQT-FGVQPTRDHYTCMVDLLGRTGRLQEALE 442
Query: 129 VVEQSEI 135
+++ +
Sbjct: 443 LIKTMSV 449
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/574 (36%), Positives = 353/574 (61%), Gaps = 6/574 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++++ G AL F +M RD + W S++ NQ + L +FSS+ S L
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+PD F ++ + AC NL +++ G+Q+H + I +E+ V+++L+ MYAK G + A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V + + + I++TA++ GYAK G A ++F L +++ +WTA+I G+VQ+G
Sbjct: 162 VFDSIRVKN--TISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219
Query: 189 DALELFRAMTKEGPRP-NSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+A +F M +E + L++++ + A+ G+Q+H I D + + NAL
Sbjct: 220 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
I MYAK + A+ +F+ + + D VSW+S+I+ +AQHG E+A+ L++ M++ G++P+
Sbjct: 280 IDMYAKCSDVIAAKDIFSRM-RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
+T+VG++ AC+HVG VE+GR F M + I P+L HY C++DL GR+GLL EA I
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLA-KIAAERLLLIEPDNSGAYSALANVYSACGKW 426
MP PD W +LLS+CK + +IA + + + Y L+N+Y++ W
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLW 458
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK-K 485
++ R+ + + V+K+ G S +E++ E +F A ++ HP K++I++++ K+ EE++ +
Sbjct: 459 GKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIR 518
Query: 486 LGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTA 545
G++PDT +LHD++ + K+KLL +HSE+ A+A+G++ T +RI+KNLR+C DCH
Sbjct: 519 NGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVV 578
Query: 546 IKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+K IS++ REIIVRD TR+HHFK G CSC D+W
Sbjct: 579 LKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 34/313 (10%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFS 60
R+++ SW M+S + SGR + AL F+ + +++ +W ++I+G+ Q G EA +F+
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M ++ D L+S + AC NL G+Q+H +I FD + NALI MYAK
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
V A+ + S + D +++T+L IVG
Sbjct: 287 SDVIAAKDIF--SRMRHRDVVSWTSL-------------------------------IVG 313
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DL 239
Q+G + AL L+ M G +PN T ++ S + G+++ S +
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
S+ L+ + ++G +D A+ + + + + D +W++++ A + G G+ I + + +
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Query: 300 LALGIEPDHITYV 312
++ D TY+
Sbjct: 434 VSSFKLKDPSTYI 446
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 110/222 (49%), Gaps = 9/222 (4%)
Query: 213 LSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNND 272
L + +R +L K +HA ++ + N L+ +Y K G+ +A +VF+ + + D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP-HRD 68
Query: 273 TVSWSSMIIALAQHGL-GEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS-Y 330
++W+S++ AL Q L G+ + G+ PD + ++ AC ++G ++ GR +
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
+ + S + + + + ++D+Y + GLL A +++ ++ + I+W +++S Y
Sbjct: 129 CHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG---YA 182
Query: 391 NVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKI 432
+ A E ++ N +++AL + + GK +A +
Sbjct: 183 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSV 224
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/553 (39%), Positives = 331/553 (59%), Gaps = 36/553 (6%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F+ MSE DIV +NSM GY++ E LF +L+D L PD +T S L AC +
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACAVAKA 144
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+ G+Q+H ++ D + V LI+MY +E D+D+
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMY---------------TECEDVDS------- 182
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
AR +FD + VV + AMI GY + ++AL LFR M + +PN
Sbjct: 183 -----------ARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEI 231
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
TL ++LS + SL+ GK IH A + + V ALI M+AK GS+D+A +F +
Sbjct: 232 TLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM 291
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+ DT +WS+MI+A A HG E+++ +FE+M + ++PD IT++G+L+AC+H G VE+G
Sbjct: 292 RYK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCK 387
R YF+ M S I P++ HY M+DL RAG L++A++FI+ +PI P + W LL++C
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Query: 388 VYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGS 447
+ N+DLA+ +ER+ ++ + G Y L+N+Y+ KWE +RK+M DR K G
Sbjct: 411 SHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGC 470
Query: 448 SWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLH-DLEIEVKDK 506
S +E+ N VH F + D + ++++ +D++ +E+K G++PDT V+H ++ + K+
Sbjct: 471 SSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEI 530
Query: 507 LLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFH 566
LRYHSEKLAI FG+++TP TT+R++KNLR+C DCH A K IS + GR++++RDV RFH
Sbjct: 531 TLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFH 590
Query: 567 HFKDGFCSCRDYW 579
HF+DG CSC D+W
Sbjct: 591 HFEDGKCSCGDFW 603
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 145/294 (49%), Gaps = 37/294 (12%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I+++ +D A F ++ E +V +N+MI GY + EAL LF M Q LKP
Sbjct: 170 LINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM-QGKYLKP 228
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
++ TL S LS+C L +++LGK IH Y + F V ALI M+AK G ++
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLD------ 282
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
DA++ IF+ +R +D AW+AMIV Y +G + +
Sbjct: 283 --------DAVS-------------------IFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--ALI 248
+ +F M E +P+ T +L+ S + G++ + S + S+ + S+ + +++
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK-YFSQMVSKFGIVPSIKHYGSMV 374
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
+ ++AG++++A + + + + + W ++ A + H + A ++ E++ L
Sbjct: 375 DLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 149/302 (49%), Gaps = 10/302 (3%)
Query: 136 SDLDAIAFTALLDGYAKLG----DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDAL 191
S ++ ++F A L + ++ AR +F+++ D+V + +M GY + +
Sbjct: 55 SHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVF 114
Query: 192 ELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
LF + ++G P+++T ++L + +L G+Q+H +++ D ++ V LI MY
Sbjct: 115 SLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMY 174
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
+ +D+A+ VF+ I V +++MI A+ EA+ LF +M ++P+ IT
Sbjct: 175 TECEDVDSARCVFDRIV-EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITL 233
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP 371
+ VLS+C +G ++ G+ + + A H + +ID++ + G L +A E M
Sbjct: 234 LSVLSSCALLGSLDLGK-WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 372 IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSACGKWEDA 429
+ D AW +++ + + + + + ER+ ++PD + L N S G+ E+
Sbjct: 293 YK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI-TFLGLLNACSHTGRVEEG 350
Query: 430 AK 431
K
Sbjct: 351 RK 352
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/563 (37%), Positives = 331/563 (58%), Gaps = 37/563 (6%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAST 78
G + A F +M + I WN++ GY ++ E+L L+ M +D ++PD+FT
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPFV 115
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
+ A + L + + G +H+++++ F G V L+ MY K
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMK------------------- 156
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
G+++ A +F+S++ +D+VAW A + VQ G + ALE F M
Sbjct: 157 --------------FGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
+ + +SFT+ +MLS + SL G++I+ A + D +I V NA + M+ K G+ +
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
A+ +F + N VSWS+MI+ A +G EA+ LF M G+ P+++T++GVLSAC
Sbjct: 263 AARVLFEEMKQRN-VVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 319 THVGLVEQGRSYFNLMASVH--KIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDV 376
+H GLV +G+ YF+LM + +EP HYACM+DL GR+GLL+EA++FI+ MP+EPD
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 377 IAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLM 436
WG+LL +C V++++ L + A+ L+ PD + L+N+Y+A GKW+ K+R M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 437 NDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVL 496
G KK S +E + ++H F D HPQ IY+ +D+I ++I+K+G++PDT SV
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Query: 497 HDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGRE 556
HD+E+E K+ L +HSEKLAIAFG+I +R+MKNLR C+DCH KF+S L E
Sbjct: 502 HDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTE 561
Query: 557 IIVRDVTRFHHFKDGFCSCRDYW 579
II+RD RFHHF++G CSC+++W
Sbjct: 562 IIMRDKNRFHHFRNGVCSCKEFW 584
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 135/314 (42%), Gaps = 78/314 (24%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++M G + A F+ M +D+V WN+ +A Q G ALE F+ M D +++
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD-AVQF 208
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D FT+ S LSAC L ++ +G++I+ + E D + V+NA + M+ K G E AR +
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
E E+ + ++++ ++ GYA NG + +A
Sbjct: 269 E--EMKQRNVVSWSTMIVGYA-------------------------------MNGDSREA 295
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L LF M EG RPN T +LS S +N GK
Sbjct: 296 LTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGK------------------------ 331
Query: 251 YAKAGSIDNAQKVFNLICWNND------TVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+ F+L+ +ND ++ M+ L + GL EEA E +KM +
Sbjct: 332 -----------RYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM---PV 377
Query: 305 EPDHITYVGVLSAC 318
EPD + +L AC
Sbjct: 378 EPDTGIWGALLGAC 391
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
Query: 143 FTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP 202
T LL+ +GD+ ARQ+FD + + W + GYV+N L ++L L++ M G
Sbjct: 46 LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGV 105
Query: 203 RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQK 262
RP+ FT ++ S+ + G +HA ++ V L+ MY K G + +A+
Sbjct: 106 RPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEF 165
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
+F + D V+W++ + Q G A+E F KM A ++ D T V +LSAC +G
Sbjct: 166 LFESM-QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLG 224
Query: 323 LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
+E G ++ A +I+ + +D++ + G + A E M + +V++W ++
Sbjct: 225 SLEIGEEIYD-RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTM 282
Query: 383 L 383
+
Sbjct: 283 I 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 87/161 (54%), Gaps = 5/161 (3%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N + +H+ G + A F++M +R++V+W++MI GY +G +EAL LF++M Q+ L
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM-QNEGL 307
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRT---EFDISGAVQNALISMYAKTGGVEV 125
+P+ T LSAC++ +N GK+ S ++++ + ++ + ++G +E
Sbjct: 308 RPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEE 367
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL 166
A +++ + + D + ALL A D+ +++ D L
Sbjct: 368 AYEFIKKMPV-EPDTGIWGALLGACAVHRDMILGQKVADVL 407
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/572 (37%), Positives = 329/572 (57%), Gaps = 36/572 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ + G + A F + + + +WN++I G+ Q + +L+ M + S L
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGL 492
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD FT+ S LSAC+ L+++ LGK++H +IIR +
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE------------------------ 528
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
D + ++L Y G++ + +FD++ ++ +V+W +I GY+QNG D
Sbjct: 529 ---------RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 579
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
AL +FR M G + ++ + S SL G++ HA A++ + + +LI
Sbjct: 580 RALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI 639
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MYAK GSI + KVFN + T SW++MI+ HGL +EAI+LFE+M G PD
Sbjct: 640 DMYAKNGSITQSSKVFNGL-KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI- 367
+T++GVL+AC H GL+ +G Y + M S ++P L HYAC+ID+ GRAG L +A + +
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
E M E DV W SLLSSC++++N+++ + A +L +EP+ Y L+N+Y+ GKWE
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 818
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLG 487
D K+R+ MN+ ++K+ G SW+E+ +V F + +EI + + +I K+G
Sbjct: 819 DVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 878
Query: 488 FIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIK 547
+ PDT SV HDL E K + LR HSEKLA+ +G+I T E TT+R+ KNLRIC DCH A K
Sbjct: 879 YRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAK 938
Query: 548 FISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
ISK+M REI+VRD RFHHFK+G CSC DYW
Sbjct: 939 LISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 202/448 (45%), Gaps = 76/448 (16%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ---D 65
N ++S + G + AL F M ER++V+WNSMI ++ +GF +E+ L M++ D
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDIS--------------GAVQN 111
+ PD TL + L C + LGK +H + ++ D G + N
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 112 A-----------LISMYAKTGGV----------EVARRV------VEQSEISDLDAIAF- 143
A ++S GG +V R++ V+ E++ L+A+
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 144 ----------------------------TALLDGYAKLGDITPARQIFDSLRNRDVVAWT 175
A + YAK G ++ A+++F +R++ V +W
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
A+I G+ Q+ +L+ M G P+SFT+ ++LS S+ SL GK++H IR+
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIEL 295
+ + V +++++Y G + Q +F+ + + VSW+++I Q+G + A+ +
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNGFPDRALGV 584
Query: 296 FEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYG 355
F +M+ GI+ I+ + V AC+ + + GR + A H +E +ID+Y
Sbjct: 585 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYA 643
Query: 356 RAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ G + ++ K + E +W +++
Sbjct: 644 KNGSITQSSKVFNGLK-EKSTASWNAMI 670
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 40/316 (12%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I+++ G D + F + +++ WN++I+ Y+++ E LE F M+ + L P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D FT + AC + ++ +G +H +++T V NAL+S Y G V
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV------- 238
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
T A Q+FD + R++V+W +MI + NG ++++
Sbjct: 239 --------------------------TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 191 LELFRAMTKEGP----RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
L M +E P+ TL +L V +R + GK +H A++ R D + + NA
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNA 332
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG--I 304
L+ MY+K G I NAQ +F + N + VSW++M+ + G ++ +MLA G +
Sbjct: 333 LMDMYSKCGCITNAQMIFKMNN-NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391
Query: 305 EPDHITYVGVLSACTH 320
+ D +T + + C H
Sbjct: 392 KADEVTILNAVPVCFH 407
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 133/279 (47%), Gaps = 11/279 (3%)
Query: 113 LISMYAKTGGVEVARRV---VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR 169
L+ K +E+ R++ V S D + T ++ YA G +R +FD+LR++
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 170 DVVAWTAMIVGYVQNGLNDDALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQI 228
++ W A+I Y +N L D+ LE F M + P+ FT ++ + + + G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 229 HASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGL 288
H +++ + VGNAL++ Y G + +A ++F+++ N VSW+SMI + +G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN-LVSWNSMIRVFSDNGF 268
Query: 289 GEEAIELFEKMLAL----GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTL 344
EE+ L +M+ PD T V VL C + G+ + +++ L
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKEL 327
Query: 345 SHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
++D+Y + G + A + I M +V++W +++
Sbjct: 328 VLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMV 365
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 146/336 (43%), Gaps = 73/336 (21%)
Query: 209 LAAMLSVSSRGASLNHGKQIH---ASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
L +L S + + G++IH + + R R D + +ITMYA GS D+++ VF+
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLC--TRIITMYAMCGSPDDSRFVFD 144
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL-GIEPDHITYVGVLSACTHVGLV 324
+ + + W+++I + +++ L +E +E F +M++ + PDH TY V+ AC + V
Sbjct: 145 AL-RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
G + L+ +E A ++ YG G + +A + + MP E ++++W S++
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNA-LVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI- 260
Query: 385 SCKVYKNVDLAKIAAERLLLI----EPDNSGAY--------------------------- 413
+V+ + ++ E LL+ E + GA+
Sbjct: 261 --RVFSDNGFSE---ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 315
Query: 414 ---------------SALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHI 458
+AL ++YS CG +A I K+ N++ V SW V
Sbjct: 316 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV-----VSW---NTMVGG 367
Query: 459 FGAEDSLHPQKDEIYKMM----DKIWEEIKKLGFIP 490
F AE H D + +M+ D +E+ L +P
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/548 (37%), Positives = 326/548 (59%), Gaps = 18/548 (3%)
Query: 40 NSMIAGYNQHGFDKEALELFSSMLQDSS-LKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
NSMI + + +++ + + +L + LKPD +T+ + ACT L G Q+H
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 99 IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITP 158
IR FD VQ LIS+YA+ G ++ +V + I D + TA++ A+ GD+
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVF--NSIPCPDFVCRTAMVTACARCGDVVF 192
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR 218
AR++F+ + RD +AW AMI GY Q G + +AL +F M EG + N + ++LS ++
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQ 252
Query: 219 GASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN---NDTVS 275
+L+ G+ H+ R++ +++ + L+ +YAK G ++ A +VF W + +
Sbjct: 253 LGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF----WGMEEKNVYT 308
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA 335
WSS + LA +G GE+ +ELF M G+ P+ +T+V VL C+ VG V++G+ +F+ M
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 336 SVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
+ IEP L HY C++DLY RAG L++A I+ MP++P W SLL + ++YKN++L
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 396 KIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNE 455
+A++++L +E N GAY L+N+Y+ W++ + +R+ M +GV+K+ G S +E+ E
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGE 488
Query: 456 VHIFGAEDSLHPQKDEIYKMMDKIWEEIKK----LGFIPDTDSVLHDLEIEVKDKLLRYH 511
VH F D HP+ Y +D +W++I + G+ DT V+ D++ E K+ L H
Sbjct: 489 VHEFFVGDKSHPK----YTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLH 544
Query: 512 SEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDG 571
SEK AIAFGI+S E+ +RI+KNLR+C DCH ISK+ REIIVRD RFHHFKDG
Sbjct: 545 SEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDG 604
Query: 572 FCSCRDYW 579
CSC +W
Sbjct: 605 HCSCNGFW 612
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 38/304 (12%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
M++ G + A F+ M ERD + WN+MI+GY Q G +EAL +F ++Q +K
Sbjct: 180 MVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVF-HLMQLEGVKV 238
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ + S LSACT L ++ G+ HSYI R + I+ + L+ +YAK
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC---------- 288
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
GD+ A ++F + ++V W++ + G NG +
Sbjct: 289 -----------------------GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKC 325
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--ALI 248
LELF M ++G PN+ T ++L S ++ G Q H ++R+ + + + L+
Sbjct: 326 LELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGCLV 384
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+YA+AG +++A + + WSS++ A + E + +KML L +H
Sbjct: 385 DLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELET-ANH 443
Query: 309 ITYV 312
YV
Sbjct: 444 GAYV 447
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/578 (39%), Positives = 341/578 (58%), Gaps = 43/578 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFD-KEALELFSSMLQDSS 67
N +++L+ +G ++ F M E D V+WNS+I + EA+ F + Q +
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA-QRAG 512
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
K ++ T +S LSA ++L LGKQIH ++ +NALI+ Y K
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKC------- 565
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL-RNRDVVAWTAMIVGYVQNGL 186
G++ +IF + RD V W +MI GY+ N L
Sbjct: 566 --------------------------GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
AL+L M + G R +SF A +LS + A+L G ++HA ++R+ + + VG+A
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IE 305
L+ MY+K G +D A + FN + N + SW+SMI A+HG GEEA++LFE M G
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRN-SYSWNSMISGYARHGQGEEALKLFETMKLDGQTP 718
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
PDH+T+VGVLSAC+H GL+E+G +F M+ + + P + H++CM D+ GRAG L +
Sbjct: 719 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLED 778
Query: 366 FIENMPIEPDVIAWGSLLSSC--KVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
FIE MP++P+V+ W ++L +C + +L K AAE L +EP+N+ Y L N+Y+A
Sbjct: 779 FIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 838
Query: 424 GKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEI 483
G+WED K RK M D VKKE G SW+ +++ VH+F A D HP D IYK + ++ ++
Sbjct: 839 GRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898
Query: 484 KKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTL--RIMKNLRICND 541
+ G++P T L+DLE E K+++L YHSEKLA+AF +++ ++TL RIMKNLR+C D
Sbjct: 899 RDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGD 957
Query: 542 CHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
CH+A K+ISK+ GR+II+RD RFHHF+DG CSC D+W
Sbjct: 958 CHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 187/378 (49%), Gaps = 39/378 (10%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++++ G I A F M+++D V+WNSMI G +Q+G EA+E + SM + L
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P FTL S+LS+C +L+ LG+QIH ++ D++ +V NAL+++YA+T
Sbjct: 413 -PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET-------- 463
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN- 187
G + R+IF S+ D V+W ++I ++ +
Sbjct: 464 -------------------------GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+A+ F + G + N T +++LS S + GKQIH A+++ + NAL
Sbjct: 499 PEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENAL 558
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
I Y K G +D +K+F+ + D V+W+SMI + L +A++L ML G D
Sbjct: 559 IACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHK-IEPTLSHYACMIDLYGRAGLLQEAFKF 366
Y VLSA V +E+G SV +E + + ++D+Y + G L A +F
Sbjct: 619 SFMYATVLSAFASVATLERGMEVH--ACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676
Query: 367 IENMPIEPDVIAWGSLLS 384
MP+ + +W S++S
Sbjct: 677 FNTMPVR-NSYSWNSMIS 693
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 185/385 (48%), Gaps = 45/385 (11%)
Query: 9 NIMISLHMNS-GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
N++IS++ G + AL F + ++ V+WNS+I+ Y+Q G + A +FSSM D S
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 68 LKPDKFTLASTL-SACTNLE-NMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
+P ++T S + +AC+ E ++ L +QI I ++ V + L+S +AK+G +
Sbjct: 203 -RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
AR+V F+ + R+ V ++VG V+
Sbjct: 262 ARKV---------------------------------FNQMETRNAVTLNGLMVGLVRQK 288
Query: 186 LNDDALELF---RAMTKEGPRPNSFTLAAMLSVS-SRGASLNHGKQIHASAIRSR-EDLS 240
++A +LF +M P L++ S + L G+++H I + D
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
+ +GN L+ MYAK GSI +A++VF + + D+VSW+SMI L Q+G EA+E ++ M
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
I P T + LS+C + + G+ + I+ +S ++ LY G L
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYL 466
Query: 361 QEAFKFIENMPIEPDVIAWGSLLSS 385
E K +MP E D ++W S++ +
Sbjct: 467 NECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 181/379 (47%), Gaps = 40/379 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++S SG + A F QM R+ VT N ++ G + + +EA +LF M + P
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 71 DKFT-LASTLSACTNLENMNL--GKQIHSYIIRTEF-DISGAVQNALISMYAKTGGVEVA 126
+ + L S+ + E + L G+++H ++I T D + N L++MYAK
Sbjct: 309 ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC------ 362
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
G I AR++F + ++D V+W +MI G QNG
Sbjct: 363 ---------------------------GSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+A+E +++M + P SFTL + LS + G+QIH +++ DL++SV NA
Sbjct: 396 FIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNA 455
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLG-EEAIELFEKMLALGIE 305
L+T+YA+ G ++ +K+F+ + +D VSW+S+I ALA+ EA+ F G +
Sbjct: 456 LMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
+ IT+ VLSA + + E G+ L A + I + +I YG+ G + K
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGL-ALKNNIADEATTENALIACYGKCGEMDGCEK 573
Query: 366 FIENMPIEPDVIAWGSLLS 384
M D + W S++S
Sbjct: 574 IFSRMAERRDNVTWNSMIS 592
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 184/388 (47%), Gaps = 51/388 (13%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I+ ++ +G A F +M R+ V+W +++GY+++G KEAL M+++ +
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKE-GI 98
Query: 69 KPDKFTLASTLSACTNLENMNL--GKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
+++ S L AC + ++ + G+QIH + + + + V N LISMY K
Sbjct: 99 FSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC------ 152
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
+G + A F + ++ V+W ++I Y Q G
Sbjct: 153 --------------------------IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHG-----KQIHASAIRSREDLSI 241
A +F +M +G RP +T ++++ + SL +QI + +S +
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTA---CSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
VG+ L++ +AK+GS+ A+KVFN + N V+ + +++ L + GEEA +LF M +
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRN-AVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQ-----GRSYFNLMASVHKIEPTLSHYACMIDLYGR 356
+ I+ +YV +LS+ L E+ GR + + ++ + ++++Y +
Sbjct: 303 M-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLS 384
G + +A + M + D ++W S+++
Sbjct: 362 CGSIADARRVFYFMT-DKDSVSWNSMIT 388
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 144/323 (44%), Gaps = 62/323 (19%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSER-DIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
T+ N +I+ + G +D F +M+ER D VTWNSMI+GY + +AL+L MLQ
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
+ + D F A+ LSA ++ + G ++H+ +R + V +AL+ MY+K G ++
Sbjct: 613 -TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
A R F+++ R+ +W +MI GY ++
Sbjct: 672 YALR---------------------------------FFNTMPVRNSYSWNSMISGYARH 698
Query: 185 GLNDDALELFRAMTKEGPR-PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
G ++AL+LF M +G P+ T +LS S L G + E +S S
Sbjct: 699 GQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG-------FKHFESMSDSY 751
Query: 244 G--------NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG-----LGE 290
G + + + +AG +D + + + + W +++ A + LG+
Sbjct: 752 GLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGK 811
Query: 291 EAIELFEKMLALGIEPDH-ITYV 312
+A E+ +EP++ + YV
Sbjct: 812 KAAEML-----FQLEPENAVNYV 829
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 148/353 (41%), Gaps = 57/353 (16%)
Query: 137 DLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRA 196
D D L++ Y + GD AR++FD + R+ V+W ++ GY +NG + +AL R
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 197 MTKEGPRPNSFTLAAMLSVSSRGASLN--HGKQIHASAIRSREDLSISVGNALITMYAKA 254
M KEG N + ++L S+ G+QIH + + V N LI+MY K
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 255 -GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVG 313
GS+ A F I N +VSW+S+I +Q G A +F M G P T+
Sbjct: 153 IGSVGYALCAFGDIEVKN-SVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 314 -VLSACT----HVGLVEQGRSYFNLMASVHK--IEPTLSHYACMIDLYGRAGLLQEAFKF 366
V +AC+ V L+EQ +M ++ K + L + ++ + ++G L A K
Sbjct: 212 LVTTACSLTEPDVRLLEQ------IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 367 IENMPIEPDVIAWGSLLS---------SCKVYKN----VDLAKIAAERLLLIEPDNS--- 410
M V G ++ + K++ + +D++ + LL P+ S
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAE 325
Query: 411 ------------------------GAYSALANVYSACGKWEDAAKIRKLMNDR 439
G + L N+Y+ CG DA ++ M D+
Sbjct: 326 EVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/572 (36%), Positives = 334/572 (58%), Gaps = 36/572 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++S++ G + + QM RD+V WN++I GY + +AL F +M + +
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGV 459
Query: 69 KPDKFTLASTLSACTNLENM-NLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
+ T+ S LSAC ++ GK +H+YI+ F+ V+N+LI+MYAK
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC------- 512
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
GD++ ++ +F+ L NR+++ W AM+ +G
Sbjct: 513 --------------------------GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 546
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
++ L+L M G + F+ + LS +++ A L G+Q+H A++ + + NA
Sbjct: 547 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 606
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
MY+K G I K+ N SW+ +I AL +HG EE F +ML +GI+P
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSV-NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 665
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
H+T+V +L+AC+H GLV++G +Y++++A +EP + H C+IDL GR+G L EA FI
Sbjct: 666 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFI 725
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
MP++P+ + W SLL+SCK++ N+D + AAE L +EP++ Y +N+++ G+WE
Sbjct: 726 SKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWE 785
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLG 487
D +RK M + +KK+Q SW++++++V FG D HPQ EIY ++ I + IK+ G
Sbjct: 786 DVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 845
Query: 488 FIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIK 547
++ DT L D + E K+ L HSE+LA+A+ ++STPE +T+RI KNLRIC+DCH+ K
Sbjct: 846 YVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYK 905
Query: 548 FISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
F+S+++GR I++RD RFHHF+ G CSC+DYW
Sbjct: 906 FVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 183/381 (48%), Gaps = 44/381 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS+ + G +D A F QMSERD ++WNS+ A Y Q+G +E+ +FS M +
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD- 257
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ + T+++ LS ++++ G+ IH +++ FD V N L+ MYA G R
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG------R 311
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
VE A +F + +D+++W +++ +V +G +
Sbjct: 312 SVE---------------------------ANLVFKQMPTKDLISWNSLMASFVNDGRSL 344
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
DAL L +M G N T + L+ G+ +H + S + +GNAL+
Sbjct: 345 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 404
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+MY K G + +++V L D V+W+++I A+ ++A+ F+ M G+ ++
Sbjct: 405 SMYGKIGEMSESRRVL-LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNY 463
Query: 309 ITYVGVLSACTHVG-LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL---QEAF 364
IT V VLSAC G L+E+G+ + S E +I +Y + G L Q+ F
Sbjct: 464 ITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 365 KFIENMPIEPDVIAWGSLLSS 385
++N ++I W ++L++
Sbjct: 523 NGLDNR----NIITWNAMLAA 539
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 178/373 (47%), Gaps = 38/373 (10%)
Query: 14 LHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKF 73
++ GR+ A F M R+ V+WN+M++G + G E +E F M D +KP F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSF 59
Query: 74 TLASTLSACTNLENM-NLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQ 132
+AS ++AC +M G Q+H ++ ++ V A++ +Y G V +R+V E
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE- 118
Query: 133 SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALE 192
E+ D + +++T+L+ GY+ G+ ++ ++
Sbjct: 119 -EMPDRNVVSWTSLMVGYSDKGE-------------------------------PEEVID 146
Query: 193 LFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYA 252
+++ M EG N +++ ++S + G+QI ++S + ++V N+LI+M
Sbjct: 147 IYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLG 206
Query: 253 KAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYV 312
G++D A +F+ + DT+SW+S+ A AQ+G EE+ +F M E + T
Sbjct: 207 SMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 265
Query: 313 GVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPI 372
+LS HV + GR L+ + + + ++ +Y AG EA + MP
Sbjct: 266 TLLSVLGHVDHQKWGRGIHGLVVKM-GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 324
Query: 373 EPDVIAWGSLLSS 385
+ D+I+W SL++S
Sbjct: 325 K-DLISWNSLMAS 336
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 334/553 (60%), Gaps = 5/553 (0%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F D WN MI G++ + +L L+ ML SS + +T S L AC+NL
Sbjct: 72 FDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLC-SSAPHNAYTFPSLLKACSNLSA 130
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
QIH+ I + ++ N+LI+ YA TG ++A + ++ I + D +++ +++
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDR--IPEPDDVSWNSVI 188
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
GY K G + A +F + ++ ++WT MI GYVQ +N +AL+LF M P++
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
+LA LS ++ +L GK IH+ ++R + +G LI MYAK G ++ A +VF I
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+W+++I A HG G EAI F +M +GI+P+ IT+ VL+AC++ GLVE+G
Sbjct: 309 -KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCK 387
+ F M + ++PT+ HY C++DL GRAGLL EA +FI+ MP++P+ + WG+LL +C+
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 388 VYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGS 447
++KN++L + E L+ I+P + G Y AN+++ KW+ AA+ R+LM ++GV K G
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 448 SWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDL-EIEVKDK 506
S + ++ H F A D HP+ ++I + ++++ G++P+ + +L DL + + ++
Sbjct: 488 STISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREA 547
Query: 507 LLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFH 566
++ HSEKLAI +G+I T T +RIMKNLR+C DCH K ISK+ R+I++RD TRFH
Sbjct: 548 IVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFH 607
Query: 567 HFKDGFCSCRDYW 579
HF+DG CSC DYW
Sbjct: 608 HFRDGKCSCGDYW 620
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 43/307 (14%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
SWN +I ++ +G++D+AL F++M+E++ ++W +MI+GY Q +KEAL+LF M Q+
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QN 240
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
S ++PD +LA+ LSAC L + GK IHSY+ +T + + LI MYAK G +E
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
A V + I A+TAL+ GYA +G
Sbjct: 301 ALEVFKN--IKKKSVQAWTALISGYA-------------------------------YHG 327
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLSISVG 244
+A+ F M K G +PN T A+L+ S + GK I S R +I
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEAIELFEKMLA 301
++ + +AG +D A++ + + V W +++ A H LGEE E+
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL----- 442
Query: 302 LGIEPDH 308
+ I+P H
Sbjct: 443 IAIDPYH 449
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 73/352 (20%)
Query: 67 SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
SL+ + + S L C+ E + KQIH+ +++T G +Q++ YA T +
Sbjct: 9 SLEHNLYETMSCLQRCSKQEEL---KQIHARMLKT-----GLMQDS----YAITKFLSFC 56
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQI-FDSLRNRDVVAWTAMIVGYVQNG 185
I+ T+ D P QI FD D W MI G+ +
Sbjct: 57 --------------ISSTS--------SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSD 94
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
+ +L L++ M N++T ++L S ++ QIHA + + + N
Sbjct: 95 EPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVN 154
Query: 246 ALITMYAKAGSIDNAQKVFNLI------CWNN------------------------DTVS 275
+LI YA G+ A +F+ I WN+ + +S
Sbjct: 155 SLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAIS 214
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR---SYFN 332
W++MI Q + +EA++LF +M +EPD+++ LSAC +G +EQG+ SY N
Sbjct: 215 WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLN 274
Query: 333 LMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
+ +++ L +ID+Y + G ++EA + +N+ + V AW +L+S
Sbjct: 275 --KTRIRMDSVLG--CVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALIS 321
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/557 (36%), Positives = 336/557 (60%), Gaps = 5/557 (0%)
Query: 24 ALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACT 83
A F Q+ ++ +N +I ++ +A ++ ML+ S + PD T + A +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKASS 128
Query: 84 NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAF 143
+E + +G+Q HS I+R F V+N+L+ MYA G + A R+ Q D+ +++
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV--VSW 186
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
T+++ GY K G + AR++FD + +R++ W+ MI GY +N + A++LF M +EG
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
N + +++S + +L G++ + ++S +++ +G AL+ M+ + G I+ A V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 264 FNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGL 323
F + D++SWSS+I LA HG +A+ F +M++LG P +T+ VLSAC+H GL
Sbjct: 307 FEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
VE+G + M H IEP L HY C++D+ GRAG L EA FI M ++P+ G+LL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 384 SSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKK 443
+CK+YKN ++A+ L+ ++P++SG Y L+N+Y+ G+W+ +R +M ++ VKK
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 444 EQGSSWLEIQNEVHIFG-AEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIE 502
G S +EI +++ F +D HP+ +I + ++I +I+ +G+ +T D++ E
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEE 545
Query: 503 VKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDV 562
K+ + HSEKLAIA+G++ T TT+RI+KNLR+C DCHT K IS++ GRE+IVRD
Sbjct: 546 EKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDR 605
Query: 563 TRFHHFKDGFCSCRDYW 579
RFHHF++G CSCRDYW
Sbjct: 606 NRFHHFRNGVCSCRDYW 622
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 8/256 (3%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ N G I A F QM RD+V+W SM+AGY + G + A E+F M
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHR--- 212
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ FT + ++ + ++ R + V ++IS A G +E R
Sbjct: 213 --NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 129 VVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
E S + + I TAL+D + + GDI A +F+ L D ++W+++I G +G
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLSISVGN 245
A+ F M G P T A+LS S G + G +I+ + + + +
Sbjct: 331 AHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYG 390
Query: 246 ALITMYAKAGSIDNAQ 261
++ M +AG + A+
Sbjct: 391 CIVDMLGRAGKLAEAE 406
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/571 (36%), Positives = 332/571 (58%), Gaps = 36/571 (6%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML-QDSSLK 69
++ ++ G A F +M ERD+V+WNS+I+GY+ G+ + E+ S M+ + +
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 70 PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
P++ T S +SAC + G+ IH +++ V NA I+ Y KT
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKT--------- 182
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
GD+T + ++F+ L +++V+W MIV ++QNGL +
Sbjct: 183 ------------------------GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEK 218
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
L F + G P+ T A+L + + IH + + + AL+
Sbjct: 219 GLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLD 278
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
+Y+K G ++++ VF+ I + D+++W++M+ A A HG G +AI+ FE M+ GI PDH+
Sbjct: 279 LYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHV 337
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T+ +L+AC+H GLVE+G+ YF M+ ++I+P L HY+CM+DL GR+GLLQ+A+ I+
Sbjct: 338 TFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKE 397
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
MP+EP WG+LL +C+VYK+ L AAERL +EP + Y L+N+YSA G W+DA
Sbjct: 398 MPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDA 457
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK-KLGF 488
++IR LM +G+ + G S++E N++H F D HP+ ++I K + +I +++K ++G+
Sbjct: 458 SRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGY 517
Query: 489 IPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKF 548
T+ VLHD+ +VK++++ HSEK+A+AFG++ + I KNLRIC DCH K
Sbjct: 518 KSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKA 577
Query: 549 ISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
IS + R II+RD RFHHF DG CSC DYW
Sbjct: 578 ISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 46/339 (13%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
L + N I+ + +G + + F+ +S +++V+WN+MI + Q+G ++ L F +
Sbjct: 166 LEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-N 224
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M + +PD+ T + L +C ++ + L + IH I+ F + + AL+ +Y+K G
Sbjct: 225 MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLG 284
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+E + V EI+ D++A+TA+L YA
Sbjct: 285 RLEDSSTVFH--EITSPDSMAWTAMLAAYA------------------------------ 312
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS-AIRSREDLS 240
+G DA++ F M G P+ T +L+ S + GK + + R R D
Sbjct: 313 -THGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEAIE-LF 296
+ + ++ + ++G + +A + + + W +++ A + LG +A E LF
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLF 431
Query: 297 EKMLALGIEP-DHITYVGVLSACTHVGLVEQGRSYFNLM 334
E +EP D YV + + + GL + NLM
Sbjct: 432 E------LEPRDGRNYVMLSNIYSASGLWKDASRIRNLM 464
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 91/177 (51%), Gaps = 5/177 (2%)
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC 268
++++++ S+ + +H ++S +G+ L+ Y + G A+K+F+ +
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKML--ALGIEPDHITYVGVLSACTHVGLVEQ 326
D VSW+S+I + G + E+ +M+ +G P+ +T++ ++SAC + G E+
Sbjct: 94 -ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
GR L+ +E A I+ YG+ G L + K E++ I+ ++++W +++
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNA-FINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI 207
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 314/496 (63%), Gaps = 35/496 (7%)
Query: 85 LENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFT 144
+ ++ LG+ IHS +IR+ F VQN+L+ +YA G
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG----------------------- 37
Query: 145 ALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRP 204
D+ A ++FD + +D+VAW ++I G+ +NG ++AL L+ M +G +P
Sbjct: 38 ----------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 87
Query: 205 NSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF 264
+ FT+ ++LS ++ +L GK++H I+ ++ N L+ +YA+ G ++ A+ +F
Sbjct: 88 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 147
Query: 265 NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL-GIEPDHITYVGVLSACTHVGL 323
+ + + ++VSW+S+I+ LA +G G+EAIELF+ M + G+ P IT+VG+L AC+H G+
Sbjct: 148 DEMV-DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
V++G YF M +KIEP + H+ CM+DL RAG +++A+++I++MP++P+V+ W +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 384 SSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKK 443
+C V+ + DLA+ A ++L +EP++SG Y L+N+Y++ +W D KIRK M GVKK
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 444 EQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEV 503
G S +E+ N VH F D HPQ D IY + ++ ++ G++P +V D+E E
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 504 KDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVT 563
K+ + YHSEK+AIAF +ISTPE + + ++KNLR+C DCH AIK +SK+ REI+VRD +
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 564 RFHHFKDGFCSCRDYW 579
RFHHFK+G CSC+DYW
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 44/305 (14%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ L+ N G + A F +M E+D+V WNS+I G+ ++G +EAL L++ M +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGI 85
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KPD FT+ S LSAC + + LGK++H Y+I+ + N L+ +YA+ G VE A+
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK- 144
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+FD + +++ V+WT++IVG NG
Sbjct: 145 --------------------------------TLFDEMVDKNSVSWTSLIVGLAVNGFGK 172
Query: 189 DALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG--- 244
+A+ELF+ M + EG P T +L S + G + R RE+ I
Sbjct: 173 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR---RMREEYKIEPRIEH 229
Query: 245 -NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
++ + A+AG + A + + + V W +++ A H G+ + F ++ L
Sbjct: 230 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQ 287
Query: 304 IEPDH 308
+EP+H
Sbjct: 288 LEPNH 292
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ S N+++ L+ GR++ A F +M +++ V+W S+I G +GF KEA+ELF M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKT 120
L P + T L AC++ + G + +R E+ I +++ ++ + A+
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARA 240
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGD 155
G V+ A ++ + + + + LL GD
Sbjct: 241 GQVKKAYEYIKSMPMQP-NVVIWRTLLGACTVHGD 274
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/577 (35%), Positives = 340/577 (58%), Gaps = 39/577 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ GRI+ A F+++ +R +++WN+MIAG+ G+ +AL+ F M+Q++++
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG-MMQEANI 204
Query: 69 K--PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
K PD+FTL S L AC++ + GKQIH +++R+ F +
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS------------------ 246
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
A +L+D Y K G + AR+ FD ++ + +++W+++I+GY Q G
Sbjct: 247 -------------ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+A+ LF+ + + + +SF L++++ V + A L GKQ+ A A++ L SV N+
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
++ MY K G +D A+K F + D +SW+ +I +HGLG++++ +F +ML IEP
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
D + Y+ VLSAC+H G++++G F+ + H I+P + HYAC++DL GRAG L+EA
Sbjct: 413 DEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKW 426
I+ MPI+P+V W +LLS C+V+ +++L K + LL I+ N Y ++N+Y G W
Sbjct: 473 IDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYW 532
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK-K 485
+ R+L N +G+KKE G SW+EI+ EVH F + + HP I + + + ++ +
Sbjct: 533 NEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREE 592
Query: 486 LGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPEN---TTLRIMKNLRICNDC 542
LG++ LHD++ E K++ LR HSEKLAI + + N T+R+ KNLR+C DC
Sbjct: 593 LGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDC 652
Query: 543 HTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
H IK +SK+ +VRD RFH F+DG CSC DYW
Sbjct: 653 HEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 149/312 (47%), Gaps = 38/312 (12%)
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSE 134
L S L CT + G Q+H Y+++ SG+ N + S Y
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLK-----SGSGLNLITSNY----------------- 46
Query: 135 ISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
L+D Y K + A ++FDS+ R+VV+W+A++ G+V NG +L LF
Sbjct: 47 -----------LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLF 95
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
M ++G PN FT + L +L G QIH ++ ++ + VGN+L+ MY+K
Sbjct: 96 SEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 155
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE--PDHITYV 312
G I+ A+KVF I + +SW++MI G G +A++ F M I+ PD T
Sbjct: 156 GRINEAEKVFRRIV-DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 313 GVLSACTHVGLVEQGRSYFN-LMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP 371
+L AC+ G++ G+ L+ S + + ++DLY + G L A K + +
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 372 IEPDVIAWGSLL 383
E +I+W SL+
Sbjct: 275 -EKTMISWSSLI 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 204 PNSF-TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQK 262
PN L ++L V +R + G Q+H ++S L++ N LI MY K A K
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
VF+ + N VSWS+++ +G + ++ LF +M GI P+ T+ L AC +
Sbjct: 63 VFDSMPERN-VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 323 LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
+E+G + E + ++D+Y + G + EA K + ++ +I+W ++
Sbjct: 122 ALEKGLQIHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAM 179
Query: 383 LSS 385
++
Sbjct: 180 IAG 182
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 324/577 (56%), Gaps = 30/577 (5%)
Query: 33 ERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGK 92
E D +N+++ GY++ ++ +F M++ + PD F+ A + A N ++ G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 93 QIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA------------ 140
Q+H ++ + V LI MY G VE AR+V ++ +L A
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 141 -----------------IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
++ +L GY K G++ A++IF + +RD V+W+ MIVG
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
NG +++ FR + + G PN +L +LS S+ S GK +H ++ +SV
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
NALI MY++ G++ A+ VF + VSW+SMI LA HG GEEA+ LF +M A G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
+ PD I+++ +L AC+H GL+E+G YF+ M V+ IEP + HY CM+DLYGR+G LQ+A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 364 FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
+ FI MPI P I W +LL +C + N++LA+ +RL ++P+NSG L+N Y+
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 424 GKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEI 483
GKW+D A IRK M + +KK S +E+ ++ F A + E ++ + +I +
Sbjct: 487 GKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Query: 484 K-KLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDC 542
K + G+ P+ S L+D+E E K+ + HSEKLA+AF + + +RI+KNLRIC DC
Sbjct: 547 KDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDC 606
Query: 543 HTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
H +K SK+ G EI+VRD RFH FKDG CSCRDYW
Sbjct: 607 HAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 142/302 (47%), Gaps = 44/302 (14%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
+R+ TSWN+M++ ++ +G ++ A F +M RD V+W++MI G +G E+ L+
Sbjct: 200 VRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESF-LYFR 258
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
LQ + + P++ +L LSAC+ + GK +H ++ + + +V NALI MY++ G
Sbjct: 259 ELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
V +AR V E + R +V+WT+MI G
Sbjct: 319 NVPMARLVFEGMQ--------------------------------EKRCIVSWTSMIAGL 346
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLS 240
+G ++A+ LF MT G P+ + ++L S + G+ + R +
Sbjct: 347 AMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPE 406
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICW---NNDTVSWSSMIIALAQHGLGEEAIELFE 297
I ++ +Y ++G + QK ++ IC + W +++ A + HG IEL E
Sbjct: 407 IEHYGCMVDLYGRSGKL---QKAYDFICQMPIPPTAIVWRTLLGACSSHG----NIELAE 459
Query: 298 KM 299
++
Sbjct: 460 QV 461
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 141/370 (38%), Gaps = 97/370 (26%)
Query: 77 STLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEIS 136
S L++C NL + QIH I+ D LI A IS
Sbjct: 10 SLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLILHCA----------------IS 50
Query: 137 DLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRA 196
DA+ + AR++ D + ++ GY ++ +++ +F
Sbjct: 51 ISDALPY---------------ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVE 95
Query: 197 MTKEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAG 255
M ++G P+SF+ A ++ SL G Q+H A++ + + VG LI MY G
Sbjct: 96 MMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCG 155
Query: 256 SIDNAQKVF------NLICWN---------NDT--------------------------- 273
++ A+KVF NL+ WN ND
Sbjct: 156 CVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK 215
Query: 274 -------------------VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
VSWS+MI+ +A +G E+ F ++ G+ P+ ++ GV
Sbjct: 216 AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGV 275
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
LSAC+ G E G+ + +S +ID+Y R G + A E M +
Sbjct: 276 LSACSQSGSFEFGKILHGFVEKA-GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 375 DVIAWGSLLS 384
+++W S+++
Sbjct: 335 CIVSWTSMIA 344
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 333/576 (57%), Gaps = 45/576 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVT---WNSMIAGYNQHGFDKEALELFSSMLQDSS 67
+I+L R+DLA F +++ ++T W +M GY+++G ++AL ++ ML S
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLC-SF 231
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
++P F+++ L AC +L+++ +G+ IH+ I++ +
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRK------------------------- 266
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
+D + + LL Y + G AR++FD + R+VV W ++I +
Sbjct: 267 --------EKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRV 318
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+ LFR M +E + TL +L SR A+L GK+IHA ++S+E + + N+L
Sbjct: 319 HEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSL 378
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ MY K G ++ +++VF+++ D SW+ M+ A +G EE I LFE M+ G+ PD
Sbjct: 379 MDMYGKCGEVEYSRRVFDVML-TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD 437
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
IT+V +LS C+ GL E G S F M + ++ P L HYAC++D+ GRAG ++EA K I
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVI 497
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
E MP +P WGSLL+SC+++ NV + +IAA+ L ++EP N G Y ++N+Y+ W+
Sbjct: 498 ETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWD 557
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEE----I 483
+ KIR++M RGVKKE G SW+++++++ IF A + + YK K+W E I
Sbjct: 558 NVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYK---KVWTELQEAI 614
Query: 484 KKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCH 543
+K G+ P+T VLHD++ E K + HSE+LA + +I T E +RI KNLR+C DCH
Sbjct: 615 EKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCH 674
Query: 544 TAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+ +K +S++ R I++RD RFHHF DG CSC+DYW
Sbjct: 675 SWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 45/297 (15%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
+N+++ L+M SG D A F MSER++VTWNS+I+ ++ E LF M Q+
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM-QEEM 332
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
+ TL + L AC+ + + GK+IH+ I++++ + N+L+ MY K G VE +R
Sbjct: 333 IGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSR 392
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
RV FD + +D+ +W M+ Y NG
Sbjct: 393 RV---------------------------------FDVMLTKDLASWNIMLNCYAINGNI 419
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG--- 244
++ + LF M + G P+ T A+LS S +G + R + + +S
Sbjct: 420 EEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE---RMKTEFRVSPALEH 476
Query: 245 -NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGE-EAIELF 296
L+ + +AG I A KV + + W S++ + HG +GE A ELF
Sbjct: 477 YACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 533
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/483 (40%), Positives = 300/483 (62%), Gaps = 15/483 (3%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G ++ A F +M +R++V+WNS+I + Q+G EAL++F ML+ S ++P
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE-SRVEP 251
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTE---FDISGAVQNALISMYAKTGGVEVAR 127
D+ TLAS +SAC +L + +G+++H +++ + DI + NA + MYAK ++ AR
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI--ILSNAFVDMYAKCSRIKEAR 309
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
+ + I ++ IA T+++ GYA AR +F + R+VV+W A+I GY QNG N
Sbjct: 310 FIFDSMPIRNV--IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN 367
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR------SREDLSI 241
++AL LF + +E P ++ A +L + A L+ G Q H ++ S E+ I
Sbjct: 368 EEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDI 427
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
VGN+LI MY K G ++ VF + D VSW++MII AQ+G G EA+ELF +ML
Sbjct: 428 FVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
G +PDHIT +GVLSAC H G VE+GR YF+ M + P HY CM+DL GRAG L+
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLE 546
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYS 421
EA IE MP++PD + WGSLL++CKV++N+ L K AE+LL +EP NSG Y L+N+Y+
Sbjct: 547 EAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYA 606
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWE 481
GKWED +RK M GV K+ G SW++IQ H+F +D HP+K +I+ ++D +
Sbjct: 607 ELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIA 666
Query: 482 EIK 484
E++
Sbjct: 667 EMR 669
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 203/424 (47%), Gaps = 85/424 (20%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+I +WN +++ G +D A + F+ M ERD TWNSM++G+ QH +EAL F +M
Sbjct: 84 RNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF-AM 142
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ ++++ AS LSAC+ L +MN G Q+HS I ++ F + +AL+ MY+K G
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
V A+RV FD + +R+VV+W ++I +
Sbjct: 203 VNDAQRV---------------------------------FDEMGDRNVVSWNSLITCFE 229
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS---REDL 239
QNG +AL++F+ M + P+ TLA+++S + +++ G+++H +++ R D+
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNN---------------------------- 271
+S NA + MYAK I A+ +F+ + N
Sbjct: 290 ILS--NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 272 --DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
+ VSW+++I Q+G EEA+ LF + + P H ++ +L AC + + G
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG-- 405
Query: 330 YFNLMASVHKIEPTLSHYA----------CMIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
+ A VH ++ + +ID+Y + G ++E + M +E D ++W
Sbjct: 406 ---MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSW 461
Query: 380 GSLL 383
+++
Sbjct: 462 NAMI 465
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 203/389 (52%), Gaps = 10/389 (2%)
Query: 55 ALELFSSMLQDSSLKPDKFTLASTLSAC--TNLENMNLGKQIHSYIIRTEFDISGAVQNA 112
A + F + D S D A L +C + L + + + +H+ +I++ F +QN
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 60
Query: 113 LISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV 172
LI Y+K G +E R+V ++ + + + +++ G KLG + A +F S+ RD
Sbjct: 61 LIDAYSKCGSLEDGRQVFDK--MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
W +M+ G+ Q+ ++AL F M KEG N ++ A++LS S +N G Q+H+
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEA 292
+S + +G+AL+ MY+K G++++AQ+VF+ + + + VSW+S+I Q+G EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM-GDRNVVSWNSLITCFEQNGPAVEA 237
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMID 352
+++F+ ML +EPD +T V+SAC + ++ G+ + K+ + +D
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 353 LYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGA 412
+Y + ++EA ++MPI +VIA S++S + + A++ ++ N +
Sbjct: 298 MYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAASTKAARLMFTKM---AERNVVS 353
Query: 413 YSALANVYSACGKWEDAAKIRKLMNDRGV 441
++AL Y+ G+ E+A + L+ V
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESV 382
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 47/295 (15%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
+R++ + MIS + + A F +M+ER++V+WN++IAGY Q+G ++EAL LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-C 375
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA------VQNALIS 115
+L+ S+ P ++ A+ L AC +L ++LG Q H ++++ F V N+LI
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 116 MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWT 175
MY K G VE +GY +F + RD V+W
Sbjct: 436 MYVKCGCVE-----------------------EGYL----------VFRKMMERDCVSWN 462
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
AMI+G+ QNG ++ALELFR M + G +P+ T+ +LS + G+ +S R
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR- 521
Query: 236 REDLSISV----GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQH 286
D ++ ++ + +AG ++ A+ + + D+V W S++ A H
Sbjct: 522 --DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I +++ G ++ F++M ERD V+WN+MI G+ Q+G+ EALELF ML+ S
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE-SGE 489
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVA 126
KPD T+ LSAC + + G+ S + R +F ++ + ++ + + G +E A
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTR-DFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL---RNRDVVAWTAMIVGYVQ 183
+ ++E+ + D++ + +LL +IT + + + L + + + Y +
Sbjct: 549 KSMIEEMPMQP-DSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAE 607
Query: 184 NGLNDDALELFRAMTKEG 201
G +D + + ++M KEG
Sbjct: 608 LGKWEDVMNVRKSMRKEG 625
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/570 (36%), Positives = 326/570 (57%), Gaps = 36/570 (6%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ L+ G + A F +M + D+V W+ MIA + Q+GF EA++LF M +++ + P
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVP 346
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
++FTL+S L+ C + LG+Q+H +++ FD+ V NALI
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALI---------------- 390
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
D YAK + A ++F L +++ V+W +IVGY G A
Sbjct: 391 -----------------DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
+FR + T ++ L + AS++ G Q+H AI++ ++V N+LI M
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDM 493
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK G I AQ VFN + D SW+++I + HGLG +A+ + + M +P+ +T
Sbjct: 494 YAKCGDIKFAQSVFNEM-ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
++GVLS C++ GL++QG+ F M H IEP L HY CM+ L GR+G L +A K IE +
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGI 612
Query: 371 PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAA 430
P EP V+ W ++LS+ N + A+ +AE +L I P + Y ++N+Y+ +W + A
Sbjct: 613 PYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVA 672
Query: 431 KIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIP 490
IRK M + GVKKE G SW+E Q +VH F S HP I M++ + + + G++P
Sbjct: 673 SIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVP 732
Query: 491 DTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPEN-TTLRIMKNLRICNDCHTAIKFI 549
D ++VL D++ E KDK L HSE+LA+A+G++ P + + IMKNLRIC+DCH+A+K I
Sbjct: 733 DRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVI 792
Query: 550 SKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
S ++ R++++RD+ RFHHF G CSC D+W
Sbjct: 793 SSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 179/377 (47%), Gaps = 43/377 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I+ + G +D A F+ + +DIV W +++ Y ++G+ +++L+L S M + + P
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM-RMAGFMP 245
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ +T + L A L + K +H I++T +
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV-------------------------- 279
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
LD LL Y +LGD++ A ++F+ + DVV W+ MI + QNG ++A
Sbjct: 280 -------LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEA 332
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
++LF M + PN FTL+++L+ + G G+Q+H ++ DL I V NALI +
Sbjct: 333 VDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDV 392
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK +D A K+F + N+ VSW+++I+ G G +A +F + L + +T
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNE-VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG---LLQEAFKFI 367
+ L AC + ++ G L + + + +ID+Y + G Q F +
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAKCGDIKFAQSVFNEM 510
Query: 368 ENMPIEPDVIAWGSLLS 384
E + DV +W +L+S
Sbjct: 511 ETI----DVASWNALIS 523
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 170/358 (47%), Gaps = 28/358 (7%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D+ N ++ Y + GFDK+AL LF M + +++ F + AC + + L ++
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVS---FVTLAQGYACQ--DPIGLYSRL 137
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL--DAIAFT--ALLDGY 150
H R +++ V + + ++ E+ + S I L D+ AF AL++ Y
Sbjct: 138 H----REGHELNPHVFTSFLKLFVSLDKAEICPWL--HSPIVKLGYDSNAFVGAALINAY 191
Query: 151 AKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
+ G + AR +F+ + +D+V W ++ YV+NG +D+L+L M G PN++T
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFD 251
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
L S + + K +H +++ L VG L+ +Y + G + +A KVFN +
Sbjct: 252 TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM-PK 310
Query: 271 NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT---HVGLVEQG 327
ND V WS MI Q+G EA++LF +M + P+ T +L+ C GL EQ
Sbjct: 311 NDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ- 369
Query: 328 RSYFNLMASVHKIEPTLSHYA--CMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
L V K+ L Y +ID+Y + + A K + + +V +W +++
Sbjct: 370 -----LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV-SWNTVI 421
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 38/308 (12%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ ++D A+ F ++S ++ V+WN++I GY G +A +F L++ +
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN-QV 445
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ T +S L AC +L +M+LG Q+H I+T AV N+LI MYAK G ++ A+
Sbjct: 446 SVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V +E+ +D ++ AL+ GY+ G A +I D +++RD
Sbjct: 506 VF--NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDC----------------- 546
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLSISVGNAL 247
+PN T +LS S ++ G++ S IR + + +
Sbjct: 547 --------------KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP- 306
+ + ++G +D A K+ I + + W +M+ A E A E++L I P
Sbjct: 593 VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILK--INPK 650
Query: 307 DHITYVGV 314
D TYV V
Sbjct: 651 DEATYVLV 658
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 136 SDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFR 195
S LD A LL+ Y K G A +FD + R+ V++ + GY D + L+
Sbjct: 80 SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYS 135
Query: 196 AMTKEGPR--PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
+ +EG P+ FT L VS A + +H+ ++ D + VG ALI Y+
Sbjct: 136 RLHREGHELNPHVFTSFLKLFVSLDKAEI--CPWLHSPIVKLGYDSNAFVGAALINAYSV 193
Query: 254 AGSIDNAQKVF-NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYV 312
GS+D+A+ VF ++C D V W+ ++ ++G E++++L M G P++ T+
Sbjct: 194 CGSVDSARTVFEGILC--KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFD 251
Query: 313 GVLSACTHVGLVEQGRS-YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP 371
L A +G + + + ++ + + ++P + ++ LY + G + +AFK MP
Sbjct: 252 TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 372 IEPDVIAWGSLLS 384
+ DV+ W +++
Sbjct: 310 -KNDVVPWSFMIA 321
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 334/581 (57%), Gaps = 40/581 (6%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
RS + +I+L ++ I F + D +NS+I ++ + + M
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM 98
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
L S++ P +T S + +C +L + +GK +H + + + F + VQ AL++ Y+
Sbjct: 99 L-SSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYS---- 153
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
K GD+ ARQ+FD + + +VAW +++ G+
Sbjct: 154 -----------------------------KCGDMEGARQVFDRMPEKSIVAWNSLVSGFE 184
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
QNGL D+A+++F M + G P+S T ++LS ++ +++ G +H I DL++
Sbjct: 185 QNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK 244
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA- 301
+G ALI +Y++ G + A++VF+ + N +W++MI A HG G++A+ELF KM
Sbjct: 245 LGTALINLYSRCGDVGKAREVFDKMKETN-VAAWTAMISAYGTHGYGQQAVELFNKMEDD 303
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
G P+++T+V VLSAC H GLVE+GRS + M +++ P + H+ CM+D+ GRAG L
Sbjct: 304 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 363
Query: 362 EAFKFIENMPIEPDVIA---WGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALAN 418
EA+KFI + A W ++L +CK+++N DL A+RL+ +EPDN G + L+N
Sbjct: 364 EAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSN 423
Query: 419 VYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDK 478
+Y+ GK ++ + IR M ++K+ G S +E++N+ ++F D H + EIY+ ++
Sbjct: 424 IYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLET 483
Query: 479 IWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRI 538
+ K++G+ P ++ V+H +E E K+ LRYHSEKLA+AFG++ T + + I+KNLRI
Sbjct: 484 LISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRI 542
Query: 539 CNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
C DCH+A K+IS + R+I VRD RFHHF++G CSC DYW
Sbjct: 543 CEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
AA ++ G + +Q+HA I + S S+ LIT+ A +I +F +
Sbjct: 10 AAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPL 69
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
+D + ++S+I + ++ L + + +ML+ + P + T+ V+ +C + + G+
Sbjct: 70 PDDFL-FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
+ A V A ++ Y + G ++ A + + MP E ++AW SL+S +
Sbjct: 129 -VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP-EKSIVAWNSLVSG---F 183
Query: 390 KNVDLAKIAAE-----RLLLIEPDNSGAYSALANVYSACGK 425
+ LA A + R EPD++ S L SAC +
Sbjct: 184 EQNGLADEAIQVFYQMRESGFEPDSATFVSLL----SACAQ 220
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 333/572 (58%), Gaps = 48/572 (8%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
I+ A F +M E ++V+W S+I+GYN G + AL +F M +D + P+++T AS
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
AC+ L +GK IH+ +ISG +N ++S
Sbjct: 140 ACSALAESRIGKNIHA-----RLEISGLRRNIVVS------------------------- 169
Query: 141 IAFTALLDGYAKLGDITPARQIFDSL--RNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
++L+D Y K D+ AR++FDS+ R+VV+WT+MI Y QN +A+ELFR+
Sbjct: 170 ---SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFN 226
Query: 199 K--EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGS 256
R N F LA+++S S L GK H R + + V +L+ MYAK GS
Sbjct: 227 AALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGS 286
Query: 257 IDNAQKVFNLI-CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVL 315
+ A+K+F I C + +S++SMI+A A+HGLGE A++LF++M+A I P+++T +GVL
Sbjct: 287 LSCAEKIFLRIRC--HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVL 344
Query: 316 SACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPI--E 373
AC+H GLV +G Y +LMA + + P HY C++D+ GR G + EA++ + + + E
Sbjct: 345 HACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAE 404
Query: 374 PDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIR 433
+ WG+LLS+ +++ V++ A++RL+ + AY AL+N Y+ G WED+ +R
Sbjct: 405 QGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLR 464
Query: 434 KLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF----- 488
M G KE+ SW+E ++ V++F A D + EI + + + + +K+ G
Sbjct: 465 LEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSS 524
Query: 489 -IPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIK 547
I + SV D++ E KD+++ H E+LA+A+G++ P +T+RIM NLR+C DCH A K
Sbjct: 525 MITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFK 584
Query: 548 FISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
IS+++ REI+VRDV RFH FK+G C+CRDYW
Sbjct: 585 LISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 164/350 (46%), Gaps = 46/350 (13%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
D L+ Y KL +I AR++FD + +VV+WT++I GY G +AL +F+ M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 199 KEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
++ P PN +T A++ S A GK IHA S +I V ++L+ MY K +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 258 DNAQKVFN-LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA--LGIEPDHITYVGV 314
+ A++VF+ +I + + VSW+SMI A AQ+ G EAIELF A + V
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 315 LSACTHVGLVEQGR-------------------SYFNLMASVHKIE-----------PTL 344
+SAC+ +G ++ G+ S ++ A + ++
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 345 SHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSCK----VYKNVDLAKI 397
Y MI + GL + A K + M I P+ + +L +C V + ++ +
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 398 AAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGS 447
AE+ ++ PD S Y+ + ++ G+ ++A ++ K + V EQG+
Sbjct: 363 MAEKYGVV-PD-SRHYTCVVDMLGRFGRVDEAYELAKTIE---VGAEQGA 407
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 333/572 (58%), Gaps = 47/572 (8%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++++++ G + A F QM+ + V ++ GY Q G ++AL+LF ++ + ++
Sbjct: 225 IVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEW 283
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D F + L AC +LE +NLGKQIH+ + AK G
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACV-------------------AKLG--------- 315
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+SE+S T L+D Y K A + F +R + V+W+A+I GY Q ++A
Sbjct: 316 LESEVS-----VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 191 LELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
++ F+++ +K NSFT ++ S A N G Q+HA AI+ S +ALIT
Sbjct: 371 VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT 430
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MY+K G +D+A +VF + N D V+W++ I A +G EA+ LFEKM++ G++P+ +
Sbjct: 431 MYSKCGCLDDANEVFESM-DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV 489
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T++ VL+AC+H GLVEQG+ + M + + PT+ HY CMID+Y R+GLL EA KF++N
Sbjct: 490 TFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKN 549
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
MP EPD ++W LS C +KN++L +IA E L ++P+++ Y N+Y+ GKWE+A
Sbjct: 550 MPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEA 609
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFI 489
A++ KLMN+R +KKE SW++ + ++H F D HPQ EIY E++K+
Sbjct: 610 AEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIY-------EKLKEFDGF 662
Query: 490 PDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPEN--TTLRIMKNLRICNDCHTAIK 547
+ D ++ E +++LL HSE+LAIAFG+IS N +++ KNLR C DCH K
Sbjct: 663 MEGDMFQCNM-TERREQLLD-HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAK 720
Query: 548 FISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+S + G EI++RD RFHHFK+G CSC DYW
Sbjct: 721 HVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 191/410 (46%), Gaps = 56/410 (13%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
S+ N ++ ++ ++ A F +MSE + V+ +MI+ Y + G +A+ LFS ML
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
S KP + L + N ++ G+QIH+++IR + +++ +++MY K
Sbjct: 177 A-SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC--- 232
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
G + A+++FD + + VA T ++VGY Q
Sbjct: 233 ------------------------------GWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
G DAL+LF + EG +SF + +L + LN GKQIHA + + +SV
Sbjct: 263 AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV 322
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
G L+ Y K S ++A + F I ND VSWS++I Q EEA++ F+ + +
Sbjct: 323 GTPLVDFYIKCSSFESACRAFQEIREPND-VSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 304 IEP-DHITYVGVLSACTHVGLVEQGRSYFNLMASVH--KIEPTL--SHY--ACMIDLYGR 356
+ TY + AC+ + N+ VH I+ +L S Y + +I +Y +
Sbjct: 382 ASILNSFTYTSIFQACSVLADC-------NIGGQVHADAIKRSLIGSQYGESALITMYSK 434
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE 406
G L +A + E+M PD++AW + +S Y N A+E L L E
Sbjct: 435 CGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGN------ASEALRLFE 477
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 154/345 (44%), Gaps = 37/345 (10%)
Query: 40 NSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYII 99
N + ++H EA E M + + ++ AC L +++ G+ +H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEM-DKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMR 110
Query: 100 RTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPA 159
+ S +QN ++ MY + +E A ++ + E+S+L+A++ T ++ YA
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFD--EMSELNAVSRTTMISAYA-------- 160
Query: 160 RQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRG 219
+ G+ D A+ LF M G +P S +L
Sbjct: 161 -----------------------EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNP 197
Query: 220 ASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSM 279
+L+ G+QIHA IR+ + S+ ++ MY K G + A++VF+ + V+ + +
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKK-PVACTGL 256
Query: 280 IIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK 339
++ Q G +A++LF ++ G+E D + VL AC + + G+ +A +
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKL-G 315
Query: 340 IEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
+E +S ++D Y + + A + + + EP+ ++W +++S
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIIS 359
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 10/214 (4%)
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
++A E + M K G +S++ + SL+HG+ +H E+ S+ + N +
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCV 124
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ MY + S+++A K+F+ + N VS ++MI A A+ G+ ++A+ LF MLA G +P
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELN-AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTL----SHYACMIDLYGRAGLLQEA 363
Y +L + + ++ GR H I L S ++++Y + G L A
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQI-----HAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 364 FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKI 397
+ + M ++ V G ++ + + D K+
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKL 272
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/562 (37%), Positives = 332/562 (59%), Gaps = 40/562 (7%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGY-NQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
++ A + F+ + + +N+MI GY N F+ EAL ++ M+Q + +PD FT L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFE-EALCFYNEMMQRGN-EPDNFTYPCLL 139
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
ACT L+++ GKQIH + + + VQN+LI+MY +
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC------------------- 180
Query: 140 AIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTK 199
G++ + +F+ L ++ +W++M+ G+ + L LFR M
Sbjct: 181 --------------GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCS 226
Query: 200 EG--PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
E S ++A+L+ ++ GA LN G IH +R+ +L+I V +L+ MY K G +
Sbjct: 227 ETNLKAEESGMVSALLACANTGA-LNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCL 285
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
D A +F + N+ +++S+MI LA HG GE A+ +F KM+ G+EPDH+ YV VL+A
Sbjct: 286 DKALHIFQKMEKRNN-LTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNA 344
Query: 318 CTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVI 377
C+H GLV++GR F M K+EPT HY C++DL GRAGLL+EA + I+++PIE + +
Sbjct: 345 CSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDV 404
Query: 378 AWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMN 437
W + LS C+V +N++L +IAA+ LL + N G Y ++N+YS W+D A+ R +
Sbjct: 405 IWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIA 464
Query: 438 DRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLH 497
+G+K+ G S +E++ + H F ++D HP+ EIYKM+ ++ ++K G+ PD +L
Sbjct: 465 IKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILL 524
Query: 498 DLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREI 557
+++ E K + L+ HS+K+AIAFG++ TP + ++I +NLR+C+DCHT K IS + REI
Sbjct: 525 NVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREI 584
Query: 558 IVRDVTRFHHFKDGFCSCRDYW 579
+VRD RFH FK G CSC+DYW
Sbjct: 585 VVRDRNRFHLFKGGTCSCKDYW 606
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 34/273 (12%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I+++ G ++L+ A F+++ + +W+SM++ G E L LF M +++L
Sbjct: 171 NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
K ++ + S L AC N +NLG IH +++R +++ VQ +L+ MY K G ++
Sbjct: 231 KAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLD---- 286
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
A IF + R+ + ++AMI G +G +
Sbjct: 287 -----------------------------KALHIFQKMEKRNNLTYSAMISGLALHGEGE 317
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR-SREDLSISVGNAL 247
AL +F M KEG P+ ++L+ S + G+++ A ++ + + + L
Sbjct: 318 SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCL 377
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMI 280
+ + +AG ++ A + I + V W + +
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/510 (39%), Positives = 308/510 (60%), Gaps = 5/510 (0%)
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D L L +C N Q H+ I + + ++ + ++ Y + +ARR++
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLL 88
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+++ K+G+ A+++ + +++V+ W MI GYV+N ++A
Sbjct: 89 LWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEA 148
Query: 191 LELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
L+ + M +PN F+ A+ L+ +R L+H K +H+ I S +L+ + +AL+
Sbjct: 149 LKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVD 208
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
+YAK G I +++VF + ND W++MI A HGL EAI +F +M A + PD I
Sbjct: 209 VYAKCGDIGTSREVFYSV-KRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSI 267
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T++G+L+ C+H GL+E+G+ YF LM+ I+P L HY M+DL GRAG ++EA++ IE+
Sbjct: 268 TFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIES 327
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
MPIEPDV+ W SLLSS + YKN +L +IA + L SG Y L+N+YS+ KWE A
Sbjct: 328 MPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWESA 384
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFI 489
K+R+LM+ G++K +G SWLE +H F A D+ H + IYK+++ + ++ K GF+
Sbjct: 385 QKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFV 444
Query: 490 PDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFI 549
DTD VL D+ E K++ L YHSEKLA+A+ I+ + T +RI KN+R+C+DCH IK +
Sbjct: 445 SDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAV 504
Query: 550 SKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
SKL+ R II+RD RFH F+DG CSCRDYW
Sbjct: 505 SKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 140/294 (47%), Gaps = 37/294 (12%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N++I M G LA + S+++++TWN MI GY ++ +EAL+ +ML + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KP+KF+ AS+L+AC L +++ K +HS +I + +++ + +AL+ +YAK G
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCG------- 214
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
DI +R++F S++ DV W AMI G+ +GL
Sbjct: 215 --------------------------DIGTSREVFYSVKRNDVSIWNAMITGFATHGLAT 248
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLSISVGNAL 247
+A+ +F M E P+S T +L+ S L GK+ R + A+
Sbjct: 249 EAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAM 308
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEAIELFEK 298
+ + +AG + A ++ + D V W S++ + + LGE AI+ K
Sbjct: 309 VDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSK 362
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/570 (36%), Positives = 332/570 (58%), Gaps = 39/570 (6%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ +++ G+ A ++ E+D+V ++I GY+Q G D EA++ F SML + ++P
Sbjct: 207 LVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK-VQP 265
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+++T AS L +C NL+++ GK IH ++++ F+ + A Q +L++MY + V+ + RV
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRV- 324
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
F + + V+WT++I G VQNG + A
Sbjct: 325 --------------------------------FKCIEYPNQVSWTSLISGLVQNGREEMA 352
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L FR M ++ +PNSFTL++ L S A G+QIH + D G+ LI +
Sbjct: 353 LIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDL 412
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y K G D A+ VF+ + D +S ++MI + AQ+G G EA++LFE+M+ LG++P+ +T
Sbjct: 413 YGKCGCSDMARLVFDTLS-EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVT 471
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+ VL AC + LVE+G F+ KI T HYACM+DL GRAG L+EA + +
Sbjct: 472 VLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTE 529
Query: 371 PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAA 430
I PD++ W +LLS+CKV++ V++A+ ++L IEP + G ++N+Y++ GKW
Sbjct: 530 VINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVI 589
Query: 431 KIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSL-HPQKDEIYKMMDKIWEEIKKLGFI 489
+++ M D +KK SW+EI E H F A D HP ++I + ++++ ++ K LG++
Sbjct: 590 EMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYV 649
Query: 490 PDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFI 549
D V D+E K++ L HSEKLAIAF + ++RI+KNLR+C DCH+ IK +
Sbjct: 650 EDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNV-GGSIRILKNLRVCVDCHSWIKIV 708
Query: 550 SKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
S++M REII RD RFHHF+DG CSC DYW
Sbjct: 709 SRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 191/377 (50%), Gaps = 40/377 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ + G ID A F MSER IVTWNS+IA +H KEA+E++ M+ ++ L P
Sbjct: 105 LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL-P 163
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D++TL+S A ++L ++ H A G+EV+
Sbjct: 164 DEYTLSSVFKAFSDLSLEKEAQRSHGL--------------------AVILGLEVS---- 199
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+ +AL+D Y K G A+ + D + +DVV TA+IVGY Q G + +A
Sbjct: 200 --------NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEA 251
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
++ F++M E +PN +T A++L + +GK IH ++S + +++ +L+TM
Sbjct: 252 VKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTM 311
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y + +D++ +VF I + N VSW+S+I L Q+G E A+ F KM+ I+P+ T
Sbjct: 312 YLRCSLVDDSLRVFKCIEYPNQ-VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA--CMIDLYGRAGLLQEAFKFIE 368
L C+++ + E+GR + V K YA +IDLYG+ G A + +
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGI---VTKYGFDRDKYAGSGLIDLYGKCGCSDMA-RLVF 426
Query: 369 NMPIEPDVIAWGSLLSS 385
+ E DVI+ +++ S
Sbjct: 427 DTLSEVDVISLNTMIYS 443
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 161/320 (50%), Gaps = 15/320 (4%)
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
I+ + L+D K GDI ARQ+FD + R +V W ++I +++ + +A+E++R M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASA-IRSREDLSISVGNALITMYAKAGSIDN 259
P+ +TL+++ S + ++ H A I E ++ VG+AL+ MY K G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 260 AQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT 319
A+ V + + D V +++I+ +Q G EA++ F+ ML ++P+ TY VL +C
Sbjct: 220 AKLVLDRV-EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 320 HVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDV 376
++ + G+ LM E L+ ++ +Y R L+ ++ FK IE P+
Sbjct: 279 NLKDIGNGKLIHGLMVK-SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY----PNQ 333
Query: 377 IAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSACGKWEDAAKIRK 434
++W SL+S ++A I +++ I+P++ SAL S +E+ +I
Sbjct: 334 VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC-SNLAMFEEGRQIHG 392
Query: 435 LMNDRGVKKEQ--GSSWLEI 452
++ G +++ GS +++
Sbjct: 393 IVTKYGFDRDKYAGSGLIDL 412
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 37/303 (12%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++ S ++++++ +D +L F+ + + V+W S+I+G Q+G ++ AL F M+
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+DS +KP+ FTL+S L C+NL G+QIH + + FD + LI +Y K G
Sbjct: 361 RDS-IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
++AR V + +S++D I+ MI Y Q
Sbjct: 420 DMARLVFDT--LSEVDVISL-------------------------------NTMIYSYAQ 446
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
NG +AL+LF M G +PN T+ ++L + + G ++ S + + L+
Sbjct: 447 NGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDH 506
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
++ + +AG ++ A+ + + N D V W +++ A H E A + K+L
Sbjct: 507 YACMVDLLGRAGRLEEAEMLTTEVI-NPDLVLWRTLLSACKVHRKVEMAERITRKILE-- 563
Query: 304 IEP 306
IEP
Sbjct: 564 IEP 566
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/560 (36%), Positives = 325/560 (58%), Gaps = 37/560 (6%)
Query: 22 DLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSA 81
D A F ++ ER++ TWN+ I+ G +EA+E F + P+ T + L+A
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNA 218
Query: 82 CTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAI 141
C++ ++NLG Q+H ++R+ FD +V N LI Y K + + SEI
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC-------KQIRSSEI------ 265
Query: 142 AFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEG 201
IF + ++ V+W +++ YVQN ++ A L+ K+
Sbjct: 266 --------------------IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 202 PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQ 261
+ F ++++LS + A L G+ IHA A+++ + +I VG+AL+ MY K G I++++
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 262 KVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML--ALGIEPDHITYVGVLSACT 319
+ F+ + N V+ +S+I A G + A+ LFE+M G P+++T+V +LSAC+
Sbjct: 366 QAFDEMPEKN-LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 320 HVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
G VE G F+ M S + IEP HY+C++D+ GRAG+++ A++FI+ MPI+P + W
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 380 GSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDR 439
G+L ++C+++ L +AAE L ++P +SG + L+N ++A G+W +A +R+ +
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 440 GVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDL 499
G+KK G SW+ ++N+VH F A+D H EI + K+ E++ G+ PD L+DL
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604
Query: 500 EIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIV 559
E E K + +HSEKLA+AFG++S P + +RI KNLRIC DCH+ KF+S + REIIV
Sbjct: 605 EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664
Query: 560 RDVTRFHHFKDGFCSCRDYW 579
RD RFH FKDG CSC+DYW
Sbjct: 665 RDNNRFHRFKDGICSCKDYW 684
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 184/421 (43%), Gaps = 45/421 (10%)
Query: 15 HMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFT 74
H S R+ L L R++V+W S+I+G Q+G AL F M ++ + P+ FT
Sbjct: 57 HPESARLVLRLT-----PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV-PNDFT 110
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSE 134
A +L GKQIH+ ++ + V + MY KT
Sbjct: 111 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT-------------- 156
Query: 135 ISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
+L D AR++FD + R++ W A I V +G +A+E F
Sbjct: 157 -----------------RLRD--DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
+ PNS T A L+ S LN G Q+H +RS D +SV N LI Y K
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
I +++ +F + N VSW S++ A Q+ E+A L+ + +E V
Sbjct: 258 KQIRSSEIIFTEMGTKN-AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSV 316
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
LSAC + +E GRS + A +E T+ + ++D+YG+ G ++++ + + MP E
Sbjct: 317 LSACAGMAGLELGRS-IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EK 374
Query: 375 DVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC---GKWEDAAK 431
+++ SL+ VD+A E + + Y ++ SAC G E+ K
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 432 I 432
I
Sbjct: 435 I 435
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 144/311 (46%), Gaps = 59/311 (18%)
Query: 87 NMNLGKQIHSYIIRT-EFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTA 145
+M LG+ +H+ I++T + + N LI+MY+K E AR V+
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLR-------------- 66
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
+TPAR +VV+WT++I G QNG AL F M +EG PN
Sbjct: 67 ----------LTPAR---------NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 206 SFTL-AAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF 264
FT A +V+S + GKQIHA A++ L + VG + MY K D+A+K+F
Sbjct: 108 DFTFPCAFKAVASLRLPVT-GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 265 NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT----- 319
+ I N +W++ I G EAIE F + + P+ IT+ L+AC+
Sbjct: 167 DEIPERN-LETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 320 HVGLVEQG---RSYFNLMASVHKIEPTLSHYAC--MIDLYGRAGLLQEAFKFIENMPIEP 374
++G+ G RS F+ SV C +ID YG+ ++ + M +
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSV-----------CNGLIDFYGKCKQIRSSEIIFTEMGTK- 273
Query: 375 DVIAWGSLLSS 385
+ ++W SL+++
Sbjct: 274 NAVSWCSLVAA 284
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+I + ++ ++ G I+ + F +M E+++VT NS+I GY G AL LF M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 63 L-QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAK 119
+ P+ T S LSAC+ + G +I +R+ + I ++ ++ M +
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS-MRSTYGIEPGAEHYSCIVDMLGR 461
Query: 120 TGGVEVARRVVE----QSEISDLDAIAFTALLDGYAKLG 154
G VE A ++ Q IS A+ + G +LG
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/576 (36%), Positives = 324/576 (56%), Gaps = 38/576 (6%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
T NI+I ++ G + A F M +D V+WNS+I+GY Q G EA++LF M+
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
+ D T +S T L ++ GK +HS I++ I +V NALI MY
Sbjct: 403 EE-QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY-------- 453
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
AK G++ + +IF S+ D V W +I V+ G
Sbjct: 454 -------------------------AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
L++ M K P+ T L + + A+ GK+IH +R + + +GN
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
ALI MY+K G ++N+ +VF + D V+W+ MI A +G GE+A+E F M GI
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
PD + ++ ++ AC+H GLV++G + F M + +KI+P + HYAC++DL R+ + +A +
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 667
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALA-NVYSACG 424
FI+ MPI+PD W S+L +C+ +++ A+ + R++ + PD+ G YS LA N Y+A
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG-YSILASNAYAALR 726
Query: 425 KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
KW+ + IRK + D+ + K G SW+E+ VH+F + D PQ + IYK ++ ++ +
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMA 786
Query: 485 KLGFIPDTDSVLHDL-EIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCH 543
K G+IPD V +L E E K +L+ HSE+LAIAFG+++T T L++MKNLR+C DCH
Sbjct: 787 KEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCH 846
Query: 544 TAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
K ISK++GREI+VRD RFH FKDG CSC+D W
Sbjct: 847 EVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 192/379 (50%), Gaps = 38/379 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++++++ R A F +M RD V++N+MI GY + +E++ +F L KP
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKP 305
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D T++S L AC +L +++L K I++Y+++ F + V+N LI
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILI---------------- 349
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
D YAK GD+ AR +F+S+ +D V+W ++I GY+Q+G +A
Sbjct: 350 -----------------DVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
++LF+ M + + T ++SVS+R A L GK +H++ I+S + +SV NALI M
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK G + ++ K+F+ + DTV+W+++I A + G +++ +M + PD T
Sbjct: 453 YAKCGEVGDSLKIFSSM-GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
++ L C + G+ + E L +I++Y + G L+ + + E M
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRF-GYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Query: 371 PIEPDVIAWGSLLSSCKVY 389
DV+ W ++ + +Y
Sbjct: 571 S-RRDVVTWTGMIYAYGMY 588
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 201/380 (52%), Gaps = 42/380 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ G + A F +M RD+V+WNS+I+GY+ HG+ +EALE++ L++S +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE-LKNSWI 203
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD FT++S L A NL + G+ +H + +++ + V N L++MY K ARR
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V ++ ++ D++++ ++ GY KL + + ++F L N D
Sbjct: 264 VFDEMDVR--DSVSYNTMICGYLKLEMVEESVRMF--LENLDQF---------------- 303
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+P+ T++++L L+ K I+ +++ L +V N LI
Sbjct: 304 --------------KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILI 349
Query: 249 TMYAKAGSIDNAQKVFN-LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+YAK G + A+ VFN + C DTVSW+S+I Q G EA++LF+ M+ + + D
Sbjct: 350 DVYAKCGDMITARDVFNSMEC--KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 308 HITYVGVLSACTHVGLVEQGRS-YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
HITY+ ++S T + ++ G+ + N + S I+ ++S+ +ID+Y + G + ++ K
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKI 465
Query: 367 IENMPIEPDVIAWGSLLSSC 386
+M D + W +++S+C
Sbjct: 466 FSSMGT-GDTVTWNTVISAC 484
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 187/363 (51%), Gaps = 41/363 (11%)
Query: 24 ALAQFQQMSE-RDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSAC 82
+L+ F+++S +++ WNS+I ++++G EALE + L++S + PDK+T S + AC
Sbjct: 58 SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGK-LRESKVSPDKYTFPSVIKAC 116
Query: 83 TNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIA 142
L + +G ++ I+ F+ V NAL+ MY
Sbjct: 117 AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMY------------------------- 151
Query: 143 FTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP 202
+++G +T ARQ+FD + RD+V+W ++I GY +G ++ALE++ +
Sbjct: 152 --------SRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 203 RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQK 262
P+SFT++++L + G+ +H A++S + + V N L+ MY K +A++
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
VF+ + D+VS+++MI + + EE++ +F + L +PD +T VL AC H+
Sbjct: 264 VFDEMDV-RDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLR 321
Query: 323 LVEQGRSYFNLMASV-HKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGS 381
+ + +N M +E T+ + +ID+Y + G + A +M + D ++W S
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNS 378
Query: 382 LLS 384
++S
Sbjct: 379 IIS 381
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 217 SRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSW 276
S ++LN ++IHA I D S LI Y+ ++ VF + + W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 277 SSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMAS 336
+S+I A +++GL EA+E + K+ + PD T+ V+ AC + E G + +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 337 VHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
+ E L ++D+Y R GLL A + + MP+ D+++W SL+S
Sbjct: 135 M-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLIS 180
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 332/575 (57%), Gaps = 39/575 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ +H+ G I A F ++ ER++ ++ S+I+G+ G EA ELF M ++ S
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELS- 220
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ T A L A L ++ +GKQ+H ++ G V N +S
Sbjct: 221 DCETHTFAVMLRASAGLGSIYVGKQLHVCALKL-----GVVDNTFVS------------- 262
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
L+D Y+K GDI AR F+ + + VAW +I GY +G ++
Sbjct: 263 ---------------CGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSE 307
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+AL L M G + FTL+ M+ +S++ A L KQ HAS IR+ + I AL+
Sbjct: 308 EALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALV 367
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
Y+K G +D A+ VF+ + N +SW++++ A HG G +A++LFEKM+A + P+H
Sbjct: 368 DFYSKWGRVDTARYVFDKLPRKN-IISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNH 426
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+T++ VLSAC + GL EQG F M+ VH I+P HYACMI+L GR GLL EA FI
Sbjct: 427 VTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIR 486
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
P++ V W +LL++C++ +N++L ++ AE+L + P+ G Y + N+Y++ GK +
Sbjct: 487 RAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAE 546
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSL----HPQKDEIYKMMDKIWEEIK 484
AA + + + +G+ +W+E+ ++ H F + D K +IY+ +D++ EEI
Sbjct: 547 AAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEIS 606
Query: 485 KLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHT 544
+ G+ + +L D++ + ++++ RYHSEKLAIA+G+++TPE L+I +N RIC +CH
Sbjct: 607 EYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHK 666
Query: 545 AIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
++FIS + GRE++VRD +RFHHFK+G CSC YW
Sbjct: 667 VVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 170/376 (45%), Gaps = 48/376 (12%)
Query: 53 KEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNA 112
+EA ELF + S K T + + AC L+++ K+++ +++ F+ + N
Sbjct: 104 REAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNR 163
Query: 113 LISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV 172
++ M+ K G I AR++FD + R++
Sbjct: 164 ILLMHVKCGM---------------------------------IIDARRLFDEIPERNLY 190
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
++ ++I G+V G +A ELF+ M +E + T A ML S+ S+ GKQ+H A
Sbjct: 191 SYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCA 250
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEA 292
++ + V LI MY+K G I++A+ F + TV+W+++I A HG EEA
Sbjct: 251 LKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHGYSEEA 309
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVE-QGRSYFNLMASVHKIEPTLSHYACMI 351
+ L M G+ D T ++ T + +E +++ +L+ + E + ++
Sbjct: 310 LCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR--NGFESEIVANTALV 367
Query: 352 DLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS----------SCKVYKNVDLAKIAAER 401
D Y + G + A + +P ++I+W +L+ + K+++ + A +A
Sbjct: 368 DFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNH 426
Query: 402 LLLIEPDNSGAYSALA 417
+ + ++ AYS L+
Sbjct: 427 VTFLAVLSACAYSGLS 442
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 324/571 (56%), Gaps = 43/571 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQ--MSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
+IS++ G + A F++ S + V +N++I+GY + +A +F M +++ +
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM-KETGV 152
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
D T+ + CT E + LG+ +H ++ D AV N+ I+MY K G VE
Sbjct: 153 SVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG-- 210
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
R++FD + + ++ W A+I GY QNGL
Sbjct: 211 -------------------------------RRLFDEMPVKGLITWNAVISGYSQNGLAY 239
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
D LEL+ M G P+ FTL ++LS + + G ++ + ++ V NA I
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASI 299
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+MYA+ G++ A+ VF+++ + VSW++MI HG+GE + LF+ M+ GI PD
Sbjct: 300 SMYARCGNLAKARAVFDIMPVKS-LVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+V VLSAC+H GL ++G F M +K+EP HY+C++DL GRAG L EA +FIE
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
+MP+EPD WG+LL +CK++KNVD+A++A +++ EP+N G Y ++N+YS E
Sbjct: 419 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEG 478
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
+IR +M +R +K+ G S++E + VH+F A D H Q +E+++M+D++ + +L
Sbjct: 479 IWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG 538
Query: 489 IPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKF 548
D D E R HSE+LAIAFGI+++ T + ++KNLR+C DCH +K
Sbjct: 539 NMDCD------RGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQ 592
Query: 549 ISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+SK++ R+ +VRD +RFH+FKDG CSC+DYW
Sbjct: 593 VSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 35/345 (10%)
Query: 39 WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
WN + E++ L+ SML+ S PD F+ L +C +L G+Q+H ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGS-SPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 99 IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITP 158
+ + V ALISMY K G V AR+V E++ S ++ + AL+ GY +T
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT- 138
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR 218
DA +FR M + G +S T+ ++ + +
Sbjct: 139 ------------------------------DAAYMFRRMKETGVSVDSVTMLGLVPLCTV 168
Query: 219 GASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSS 278
L G+ +H ++ D ++V N+ ITMY K GS++ +++F+ + ++W++
Sbjct: 169 PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG-LITWNA 227
Query: 279 MIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVH 338
+I +Q+GL + +EL+E+M + G+ PD T V VLS+C H+G + G L+ S +
Sbjct: 228 VISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES-N 286
Query: 339 KIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
P + I +Y R G L +A + MP++ +++W +++
Sbjct: 287 GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMI 330
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 43/312 (13%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N I+++M G ++ F +M + ++TWN++I+GY+Q+G + LEL+ M + S +
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM-KSSGV 253
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD FTL S LS+C +L +G ++ + F + V NA ISMYA+ G
Sbjct: 254 CPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG------- 306
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
++ AR +FD + + +V+WTAMI Y +G+ +
Sbjct: 307 --------------------------NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGE 340
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG---- 244
L LF M K G RP+ +LS S + G ++ + R + + G
Sbjct: 341 IGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR---EYKLEPGPEHY 397
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+ L+ + +AG +D A + + D W +++ A H + A F K++
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF-- 455
Query: 305 EPDHITYVGVLS 316
EP++I Y ++S
Sbjct: 456 EPNNIGYYVLMS 467
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 337/583 (57%), Gaps = 18/583 (3%)
Query: 9 NIMISLHMNSGRIDLALAQFQQ--MSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDS 66
N + + +SG + A F + +SE+D V W ++++ ++++G +++LF M +
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM-RRK 105
Query: 67 SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
++ D ++ C LE++ +Q H ++ S V NAL+ MY K G V
Sbjct: 106 RVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEV 165
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
+R+ E E+ + +++T +LD K + R++F + R+ VAWT M+ GY+ G
Sbjct: 166 KRIFE--ELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGF 223
Query: 187 NDDALELFRAMT-KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR----EDLS- 240
+ LEL M + G N TL +MLS ++ +L G+ +H A++ E+ S
Sbjct: 224 TREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY 283
Query: 241 --ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
+ VG AL+ MYAK G+ID++ VF L+ + V+W+++ LA HG G I++F +
Sbjct: 284 DDVMVGTALVDMYAKCGNIDSSMNVFRLM-RKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 299 MLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG 358
M+ ++PD +T+ VLSAC+H G+V++G F+ + + +EP + HYACM+DL GRAG
Sbjct: 343 MIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAG 400
Query: 359 LLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALAN 418
L++EA + MP+ P+ + GSLL SC V+ V++A+ L+ + P N+ ++N
Sbjct: 401 LIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Query: 419 VYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDK 478
+Y A G+ + A +R + RG++K G S + + + VH F + D HP+ EIY +++
Sbjct: 461 MYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNE 520
Query: 479 IWEEIKKLGFIPDTDSVLHDLE--IEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNL 536
+ E I+ G++PD ++ E +E K++ L HSEKLA+ FG++ T +T L + KNL
Sbjct: 521 VIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNL 580
Query: 537 RICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
RIC DCH+A+K +SK+ REII+RD RFH FK G CSC DYW
Sbjct: 581 RICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 27/285 (9%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+S+ SW +++ + ++ F +M ER+ V W M+AGY GF +E LEL + M
Sbjct: 175 KSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEM 234
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ + TL S LSAC N+ +G+ +H Y ++ E +
Sbjct: 235 VFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMG---------------- 278
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
E S D + TAL+D YAK G+I + +F +R R+VV W A+ G
Sbjct: 279 ----------EEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLA 328
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G +++F M +E +P+ T A+LS S ++ G + S + +
Sbjct: 329 MHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVD 387
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG 287
++ + +AG I+ A+ + + + V S++ + + HG
Sbjct: 388 HYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG 432
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/385 (18%), Positives = 150/385 (38%), Gaps = 76/385 (19%)
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDIS--GAVQNALISMYAKTGGVEVARRVVEQSEIS 136
L C + + GK++H+ + + + + NAL YA +G + A+++ ++ +S
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 137 DLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRA 196
+ D + +T LL +++ G + + ++F +R + V DD
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEI--------------DDV------ 112
Query: 197 MTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGS 256
++ + V ++ L +Q H A++ S+ V NAL+ MY K G
Sbjct: 113 -----------SVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGL 161
Query: 257 IDNAQKVF------NLICWN------------------------NDTVSWSSMIIALAQH 286
+ +++F +++ W + V+W+ M+
Sbjct: 162 VSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGA 221
Query: 287 GLGEEAIELFEKML-ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLS 345
G E +EL +M+ G + +T +LSAC G + GR + +
Sbjct: 222 GFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEA 281
Query: 346 HY------ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY-KNVDLAKIA 398
Y ++D+Y + G + + M + +V+ W +L S ++ K + +
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMF 340
Query: 399 AERLLLIEPDNSGAYSALANVYSAC 423
+ + ++PD+ V SAC
Sbjct: 341 PQMIREVKPDD----LTFTAVLSAC 361
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/575 (37%), Positives = 317/575 (55%), Gaps = 51/575 (8%)
Query: 21 IDLALAQFQQMSERDIVTWNSMI-AGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
++ A F + WN++I A + +EA L+ ML+ PDK T L
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
AC + + GKQ+H I++ F V N LI +Y G +++AR+V
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV---------- 208
Query: 140 AIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTK 199
FD + R +V+W +MI V+ G D AL+LFR M +
Sbjct: 209 -----------------------FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR 245
Query: 200 EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE---DLSISVGNALITMYAKAGS 256
P+ +T+ ++LS + SL+ G HA +R + + + V N+LI MY K GS
Sbjct: 246 SF-EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS 304
Query: 257 IDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML--ALGIEPDHITYVGV 314
+ A++VF + D SW++MI+ A HG EEA+ F++M+ + P+ +T+VG+
Sbjct: 305 LRMAEQVFQGM-QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
L AC H G V +GR YF++M + IEP L HY C++DL RAG + EA + +MP++P
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 375 DVIAWGSLL-SSCKVYKNVDLAKIAAERLLLIEPDN-------SGAYSALANVYSACGKW 426
D + W SLL + CK +V+L++ A ++ + DN SGAY L+ VY++ +W
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRW 483
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKL 486
D +RKLM++ G++KE G S +EI H F A D+ HPQ +IY+ + I + ++ +
Sbjct: 484 NDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 543
Query: 487 GFIPD-TDSVLHDLEIE-VKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHT 544
G++PD + + L D + K+ LR HSE+LAIAFG+I+ P T +RI KNLR+CNDCH
Sbjct: 544 GYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHE 603
Query: 545 AIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
K ISK+ EIIVRD RFHHFKDG CSC DYW
Sbjct: 604 VTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 144/301 (47%), Gaps = 52/301 (17%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I L+ + G +DLA F +M ER +V+WNSMI + G AL+LF M + S
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR--SF 247
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA----VQNALISMYAKTGGVE 124
+PD +T+ S LSAC L +++LG H++++R + D+ A V+N+LI MY K G +
Sbjct: 248 EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR-KCDVDVAMDVLVKNSLIEMYCKCGSLR 306
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
+A Q+F ++ RD+ +W AMI+G+ +
Sbjct: 307 MA---------------------------------EQVFQGMQKRDLASWNAMILGFATH 333
Query: 185 GLNDDALELFRAMT--KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
G ++A+ F M +E RPNS T +L + +N G+Q +R D I
Sbjct: 334 GRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR---DYCIE 390
Query: 243 VG----NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
++ + A+AG I A + + D V W S++ A + G ++EL E+
Sbjct: 391 PALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG---ASVELSEE 447
Query: 299 M 299
+
Sbjct: 448 I 448
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 43/315 (13%)
Query: 73 FTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQ 132
F+LA T C+++ + KQ+H++ +RT + + A + +Y K
Sbjct: 52 FSLAET---CSDMSQL---KQLHAFTLRTTY----PEEPATLFLYGK------------- 88
Query: 133 SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN-GLNDDAL 191
+L + D+ A ++FDS+ N W +I + ++A
Sbjct: 89 -------------ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAF 135
Query: 192 ELFRAMTKEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L+R M + G P+ T +L + + GKQ+H ++ + V N LI +
Sbjct: 136 MLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHL 195
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y G +D A+KVF+ + VSW+SMI AL + G + A++LF +M EPD T
Sbjct: 196 YGSCGCLDLARKVFDEM-PERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYT 253
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA--CMIDLYGRAGLLQEAFKFIE 368
VLSAC +G + G + ++ + +I++Y + G L+ A + +
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ 313
Query: 369 NMPIEPDVIAWGSLL 383
M + D+ +W +++
Sbjct: 314 GMQ-KRDLASWNAMI 327
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/546 (36%), Positives = 307/546 (56%), Gaps = 43/546 (7%)
Query: 39 WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
WN +I G++ ++ ++ ML S +PD FT L +C ++++ +IH +
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 99 IRTEF-DISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDIT 157
IR+ F D DAI T+L+ Y+ G +
Sbjct: 134 IRSGFLD----------------------------------DAIVATSLVRCYSANGSVE 159
Query: 158 PARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSS 217
A ++FD + RD+V+W MI + GL++ AL +++ M EG +S+TL A+LS +
Sbjct: 160 IASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCA 219
Query: 218 RGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWS 277
++LN G +H A R + + V NALI MYAK GS++NA VFN + D ++W+
Sbjct: 220 HVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGM-RKRDVLTWN 278
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASV 337
SMII HG G EAI F KM+A G+ P+ IT++G+L C+H GLV++G +F +M+S
Sbjct: 279 SMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQ 338
Query: 338 HKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKI 397
+ P + HY CM+DLYGRAG L+ + + I D + W +LL SCK+++N++L ++
Sbjct: 339 FHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEV 398
Query: 398 AAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVH 457
A ++L+ +E N+G Y + ++YSA + A +RKL+ ++ G SW+EI ++VH
Sbjct: 399 AMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVH 458
Query: 458 IFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPD----TDSVLHDLEIEVKDKLLRYHSE 513
F +D +HP+ IY + ++ G+ P+ T L D + D HSE
Sbjct: 459 KFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADT---SHSE 515
Query: 514 KLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFC 573
KLAIA+G++ T TTLRI KNLR+C DCH+ K++SK REIIVRD RFHHF DG C
Sbjct: 516 KLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGIC 575
Query: 574 SCRDYW 579
SC DYW
Sbjct: 576 SCNDYW 581
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 41/312 (13%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ + +G +++A F +M RD+V+WN MI ++ G +AL ++ M + +
Sbjct: 148 LVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM-GNEGVCG 206
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D +TL + LS+C ++ +N+G +H + V NALI MYAK G +E
Sbjct: 207 DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE------ 260
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+AI +F+ +R RDV+ W +MI+GY +G +A
Sbjct: 261 --------NAIG-------------------VFNGMRKRDVLTWNSMIIGYGVHGHGVEA 293
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--ALI 248
+ FR M G RPN+ T +L S + G + H + S+ L+ +V + ++
Sbjct: 294 ISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMV 352
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEAIELFEKMLALGIE 305
+Y +AG ++N+ ++ + D V W +++ + H LGE A++ ++ A
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFN-A 411
Query: 306 PDHITYVGVLSA 317
D++ + SA
Sbjct: 412 GDYVLMTSIYSA 423
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ G ++ A+ F M +RD++TWNSMI GY HG EA+ F M+ S +
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA-SGV 305
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVA 126
+P+ T L C++ + G + H I+ ++F ++ V++ ++ +Y + G +E +
Sbjct: 306 RPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 127 RRVVEQSEISDLDAIAFTALL 147
++ S + D + + LL
Sbjct: 365 LEMIYASSCHE-DPVLWRTLL 384
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/574 (35%), Positives = 331/574 (57%), Gaps = 40/574 (6%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
I+ N + +++N+G A F +M +DIV+W +MI+GY + +A++ + M Q
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
DS +KPD+ T+A+ LSAC L +++ G ++H I+ V N LI+MY+K ++
Sbjct: 392 DS-VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
A LD IF ++ ++V++WT++I G N
Sbjct: 451 KA--------------------LD-------------IFHNIPRKNVISWTSIIAGLRLN 477
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
+AL R M K +PN+ TL A L+ +R +L GK+IHA +R+ L +
Sbjct: 478 NRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP 536
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
NAL+ MY + G ++ A FN D SW+ ++ ++ G G +ELF++M+ +
Sbjct: 537 NALLDMYVRCGRMNTAWSQFN--SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
PD IT++ +L C+ +V QG YF+ M + + P L HYAC++DL GRAG LQEA
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
KFI+ MP+ PD WG+LL++C+++ +DL +++A+ + ++ + G Y L N+Y+ CG
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCG 713
Query: 425 KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
KW + AK+R++M + G+ + G SW+E++ +VH F ++D HPQ EI +++ +E++
Sbjct: 714 KWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMS 773
Query: 485 KLGFIPDTDSVLHDLEIEV-KDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCH 543
++G ++S D E E+ +D++ HSE+ AIAFG+I+T + + KNL +C +CH
Sbjct: 774 EVGLTKISESSSMD-ETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCH 832
Query: 544 TAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRD 577
+KFISK + REI VRD FHHFKDG CSC D
Sbjct: 833 DTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 193/386 (50%), Gaps = 48/386 (12%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++ + G + A F +MSER++ +WN ++ GY + G+ EA+ L+ ML +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KPD +T L C + ++ GK++H +++R +++ V NALI+M
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITM------------ 240
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
Y K GD+ AR +FD + RD+++W AMI GY +NG+
Sbjct: 241 ---------------------YVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+ LELF AM P+ TL +++S G+ IHA I + + ISV N+L
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MY AGS A+K+F+ + D VSW++MI + L ++AI+ + M ++PD
Sbjct: 340 QMYLNAGSWREAEKLFSRM-ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHK--IEPTLSHYAC----MIDLYGRAGLLQE 362
IT VLSAC +G ++ G +HK I+ L Y +I++Y + + +
Sbjct: 399 ITVAAVLSACATLGDLDTG-------VELHKLAIKARLISYVIVANNLINMYSKCKCIDK 451
Query: 363 AFKFIENMPIEPDVIAWGSLLSSCKV 388
A N+P +VI+W S+++ ++
Sbjct: 452 ALDIFHNIP-RKNVISWTSIIAGLRL 476
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 148/302 (49%), Gaps = 16/302 (5%)
Query: 133 SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALE 192
S +S L A L + + G++ A +F + R++ +W ++ GY + G D+A+
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181
Query: 193 LF-RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
L+ R + G +P+ +T +L L GK++H +R +L I V NALITMY
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
K G + +A+ +F+ + D +SW++MI ++G+ E +ELF M L ++PD +T
Sbjct: 242 VKCGDVKSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTL 300
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC--MIDLYGRAGLLQEAFKFIEN 369
V+SAC +G GR ++ A V + C + +Y AG +EA K
Sbjct: 301 TSVISACELLGDRRLGR---DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL---LIEPDNSGAYSALANVYSACGKW 426
M D+++W +++S + Y + I R++ ++PD +A V SAC
Sbjct: 358 ME-RKDIVSWTTMISGYE-YNFLPDKAIDTYRMMDQDSVKPDE----ITVAAVLSACATL 411
Query: 427 ED 428
D
Sbjct: 412 GD 413
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 313/564 (55%), Gaps = 39/564 (6%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
I+ + F Q + N+MI ++ E LF S+ ++SSL + + + L
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
C ++ G QIH I + +S D+
Sbjct: 122 CCIKSGDLLGGLQIHGKIF----------SDGFLS-----------------------DS 148
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
+ T L+D Y+ + T A ++FD + RD V+W + Y++N D L LF M +
Sbjct: 149 LLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKND 208
Query: 201 ---GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
+P+ T L + +L+ GKQ+H + ++++ N L++MY++ GS+
Sbjct: 209 VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 268
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
D A +VF + N VSW+++I LA +G G+EAIE F +ML GI P+ T G+LSA
Sbjct: 269 DKAYQVFYGMRERN-VVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 318 CTHVGLVEQGRSYFNLMASVH-KIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDV 376
C+H GLV +G +F+ M S KI+P L HY C++DL GRA LL +A+ I++M ++PD
Sbjct: 328 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS 387
Query: 377 IAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLM 436
W +LL +C+V+ +V+L + L+ ++ + +G Y L N YS GKWE ++R LM
Sbjct: 388 TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLM 447
Query: 437 NDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVL 496
++ + + G S +E+Q VH F +D HP+K+EIYKM+ +I +++K G++ + S L
Sbjct: 448 KEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSEL 507
Query: 497 HDLEI-EVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGR 555
H+LE E K LRYHSEKLAIAFGI+ TP TT+R+ KNLR C DCH KF+S + R
Sbjct: 508 HNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDR 567
Query: 556 EIIVRDVTRFHHFKDGFCSCRDYW 579
+IVRD +RFHHFK G CSC D+W
Sbjct: 568 IVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++S++ G +D A F M ER++V+W ++I+G +GF KEA+E F+ ML+ +
Sbjct: 256 NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK-FGI 314
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVA 126
P++ TL LSAC++ + G + EF I + + ++ + + ++ A
Sbjct: 315 SPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKA 374
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL 166
+++ E+ D+ + LL GD+ ++ L
Sbjct: 375 YSLIKSMEMKP-DSTIWRTLLGACRVHGDVELGERVISHL 413
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 334/591 (56%), Gaps = 35/591 (5%)
Query: 22 DLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSA 81
D +L+ F+ ER+ N++I G ++ + ++ F ML+ +KPD+ T L +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLR-LGVKPDRLTFPFVLKS 135
Query: 82 CTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS-------- 133
+ L LG+ +H+ ++ D V+ +L+ MYAKTG ++ A +V E+S
Sbjct: 136 NSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 134 -------------------------EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN 168
+ + ++ +++ L+ GY G++ A+Q+F+ +
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Query: 169 RDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQI 228
++VV+WT +I G+ Q G + A+ + M ++G +PN +T+AA+LS S+ +L G +I
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Query: 229 HASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGL 288
H + + L ++G AL+ MYAK G +D A VF+ + + D +SW++MI A HG
Sbjct: 316 HGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN-HKDILSWTAMIQGWAVHGR 374
Query: 289 GEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA 348
+AI+ F +M+ G +PD + ++ VL+AC + V+ G ++F+ M + IEPTL HY
Sbjct: 375 FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYV 434
Query: 349 CMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPD 408
++DL GRAG L EA + +ENMPI PD+ W +L +CK +K A+ ++ LL ++P+
Sbjct: 435 LVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPE 494
Query: 409 NSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQ 468
G+Y L +++ G +D K R + R ++ G S++E+ +++ F A D H
Sbjct: 495 LCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKL 554
Query: 469 KDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENT 528
EI +D+I + G+ P D +HD+E E K+ + HSEKLA+ G + T T
Sbjct: 555 TQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGT 614
Query: 529 TLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
T+RI+KNLRIC DCH+ +K++SK+ R+I++RD +FHHFKDG CSC DYW
Sbjct: 615 TIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 145/307 (47%), Gaps = 41/307 (13%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+ SW+ +I +++SG ++ A F+ M E+++V+W ++I G++Q G + A+ + M
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
L+ LKP+++T+A+ LSAC+ + G +IH YI+ + A+ AL+ MYAK G
Sbjct: 285 LE-KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
++ A V S ++ D +++TA++ G+A
Sbjct: 344 LDCAATVF--SNMNHKDILSWTAMIQGWA------------------------------- 370
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G A++ FR M G +P+ A+L+ + ++ G S R D +I
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM---RLDYAIE 427
Query: 243 VGNA----LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
++ + +AG ++ A ++ + N D +W+++ A H A + +
Sbjct: 428 PTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQN 487
Query: 299 MLALGIE 305
+L L E
Sbjct: 488 LLELDPE 494
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
P+ +++ ASL H +HA +R R LS V L++ + S D + +
Sbjct: 27 PDESHFISLIHACKDTASLRH---VHAQILR-RGVLSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 264 FNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGL 323
F N V +++I L ++ E ++ F ML LG++PD +T+ VL + + +G
Sbjct: 83 FRNSEERNPFV-LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYA--CMIDLYGRAGLLQEAFKFIENMP---IEPDVIA 378
GR+ L A+ K + ++D+Y + G L+ AF+ E P + ++
Sbjct: 142 RWLGRA---LHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 379 WGSLLSSCKVYKNVDLAKIAAERLLLIEPD-NSGAYSALANVYSACGKWEDAAKIRKLMN 437
W L++ K++ +A L P+ NSG++S L Y G+ A ++ +LM
Sbjct: 199 WNVLINGYCRAKDMHMATT----LFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMP 254
Query: 438 DRGV 441
++ V
Sbjct: 255 EKNV 258
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/490 (36%), Positives = 309/490 (63%), Gaps = 4/490 (0%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ G +D+A F + + D+ +WN MI+GYN+ +E++EL M + + +
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLV 232
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P TL LSAC+ +++ +L K++H Y+ + + S ++NAL++ YA G +++A R
Sbjct: 233 SPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVR 292
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ + D+ I++T+++ GY + G++ AR FD + RD ++WT MI GY++ G +
Sbjct: 293 IFRSMKARDV--ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFN 350
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
++LE+FR M G P+ FT+ ++L+ + SL G+ I +++ + VGNALI
Sbjct: 351 ESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALI 410
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MY K G + AQKVF+ + D +W++M++ LA +G G+EAI++F +M + I+PD
Sbjct: 411 DMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDD 469
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
ITY+GVLSAC H G+V+Q R +F M S H+IEP+L HY CM+D+ GRAGL++EA++ +
Sbjct: 470 ITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILR 529
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
MP+ P+ I WG+LL + +++ + +A++AA+++L +EPDN Y+ L N+Y+ C +W+D
Sbjct: 530 KMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKD 589
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
++R+ + D +KK G S +E+ H F A D H Q +EIY ++++ +E +
Sbjct: 590 LREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAY 649
Query: 489 IPDTDSVLHD 498
+PDT +L +
Sbjct: 650 LPDTSELLFE 659
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 179/396 (45%), Gaps = 67/396 (16%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAST 78
G + A F ++ E D+V WN+MI G+++ D E + L+ +ML++ + PD T
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKE-GVTPDSHTFPFL 140
Query: 79 LSACT-NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISD 137
L+ + + GK++H ++++ + VQNAL+ MY+ G +++AR V
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV-------- 192
Query: 138 LDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM 197
FD DV +W MI GY + ++++EL M
Sbjct: 193 -------------------------FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227
Query: 198 TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
+ P S TL +LS S+ + K++H + + S+ + NAL+ YA G +
Sbjct: 228 ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 258 DNAQKVF------NLICWNN------------------------DTVSWSSMIIALAQHG 287
D A ++F ++I W + D +SW+ MI + G
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 288 LGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHY 347
E++E+F +M + G+ PD T V VL+AC H+G +E G + +KI+ +
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVG 406
Query: 348 ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ID+Y + G ++A K +M + D W +++
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMV 441
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 39/310 (12%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ R + SW ++ ++ G + LA F QM RD ++W MI GY + G E+LE+F
Sbjct: 298 KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFR 357
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M Q + + PD+FT+ S L+AC +L ++ +G+ I +YI + + V NALI MY K
Sbjct: 358 EM-QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G E A++V F + RD WTAM+VG
Sbjct: 417 GCSEKAQKV---------------------------------FHDMDQRDKFTWTAMVVG 443
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS--RED 238
NG +A+++F M +P+ T +LS + ++ ++ A +RS R +
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAK-MRSDHRIE 502
Query: 239 LSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
S+ ++ M +AG + A ++ + N +++ W +++ A H E EL K
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN-DEPMAELAAK 561
Query: 299 MLALGIEPDH 308
+ L +EPD+
Sbjct: 562 KI-LELEPDN 570
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 10/253 (3%)
Query: 154 GDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAML 213
G ++ A ++F + DVV W MI G+ + + + + L+ M KEG P+S T +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 214 SVSSR-GASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNND 272
+ R G +L GK++H ++ ++ V NAL+ MY+ G +D A+ VF+ C D
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRC-KED 200
Query: 273 TVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHV---GLVEQGRS 329
SW+ MI + EE+IEL +M + P +T + VLSAC+ V L ++
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
Y S K EP+L +++ Y G + A + +M DVI+W S++
Sbjct: 261 Y----VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVER 315
Query: 390 KNVDLAKIAAERL 402
N+ LA+ +++
Sbjct: 316 GNLKLARTYFDQM 328
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/474 (39%), Positives = 290/474 (61%), Gaps = 5/474 (1%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
LR++ SWN M+S ++ SG + A F M ERD+V+WN+M+ GY Q G EAL F
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEAL-WFYK 168
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
+ S +K ++F+ A L+AC + L +Q H ++ F + + ++I YAK G
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+E A+R ++ + D+ +T L+ GYAKLGD+ A ++F + ++ V+WTA+I GY
Sbjct: 229 QMESAKRCFDEMTVKDIHI--WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
V+ G + AL+LFR M G +P FT ++ L S+ ASL HGK+IH IR+ +
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
V ++LI MY+K+GS++ +++VF + +D V W++MI ALAQHGLG +A+ + + M+
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
++P+ T V +L+AC+H GLVE+G +F M H I P HYAC+IDL GRAG +
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYS 421
E + IE MP EPD W ++L C+++ N +L K AA+ L+ ++P++S Y L+++Y+
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYA 526
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDS--LHPQKDEIY 473
GKWE K+R +M R V KE+ SW+EI+ +V F D H +K+EIY
Sbjct: 527 DHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIY 580
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 186/385 (48%), Gaps = 37/385 (9%)
Query: 33 ERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGK 92
+R I S ++ + +A+ S+ Q P LAS L C + +++ GK
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDL-LASLLQQCGDTKSLKQGK 66
Query: 93 QIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYA 151
IH ++ T F + N LI MY K G A +V +Q + +L ++ ++ GY
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNL--YSWNNMVSGYV 124
Query: 152 KLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAA 211
K G + AR +FDS+ RDVV+W M++GY Q+G +AL ++ + G + N F+ A
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAG 184
Query: 212 MLS--VSSRGASLN---HGKQIHA-----------------------SAIRSREDLS--- 240
+L+ V SR LN HG+ + A SA R ++++
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
I + LI+ YAK G ++ A+K+F + N VSW+++I + G G A++LF KM+
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKN-PVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
ALG++P+ T+ L A + + G+ M + + P + +ID+Y ++G L
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAIVISSLIDMYSKSGSL 362
Query: 361 QEAFKFIENMPIEPDVIAWGSLLSS 385
+ + + + D + W +++S+
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISA 387
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 40/312 (12%)
Query: 167 RNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGK 226
R R + + + + A+ ++T++G R LA++L SL GK
Sbjct: 7 RKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGK 66
Query: 227 QIHAS-AIRSREDLSISVGNALITMYAKAGSIDNAQKVF------NLICWNN-------- 271
IH I + + + N LI MY K G +A KVF NL WNN
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKS 126
Query: 272 ----------------DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVL 315
D VSW++M+I AQ G EA+ +++ GI+ + ++ G+L
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 316 SACTHVGLVEQGR-SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
+AC ++ R ++ ++ + LS +ID Y + G ++ A + + M ++
Sbjct: 187 TACVKSRQLQLNRQAHGQVLVAGFLSNVVLS--CSIIDAYAKCGQMESAKRCFDEMTVK- 243
Query: 375 DVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPD-NSGAYSALANVYSACGKWEDAAKIR 433
D+ W +L+S +++ AAE+L P+ N +++AL Y G A +
Sbjct: 244 DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 434 KLMNDRGVKKEQ 445
+ M GVK EQ
Sbjct: 300 RKMIALGVKPEQ 311
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/445 (40%), Positives = 274/445 (61%), Gaps = 5/445 (1%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELF 194
DAI + +L GYA LG A + ++ + +VV+WTA+ G +NG +AL++F
Sbjct: 57 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 116
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
M +EG PN+ T++ +L + + L+ GK++H +R V AL+ MY K+
Sbjct: 117 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 176
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
G + +A ++F I N SW+ M++ A G GEE I F ML G+EPD IT+ V
Sbjct: 177 GDLQSAIEIFWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSV 235
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
LS C + GLV++G YF+LM S + I PT+ H +CM+DL GR+G L EA+ FI+ M ++P
Sbjct: 236 LSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKP 295
Query: 375 DVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRK 434
D WG+ LSSCK++++++LA+IA +RL ++EP NS Y + N+YS +WED +IR
Sbjct: 296 DATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRN 355
Query: 435 LMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDS 494
LM + V+ + SW++I VHIF AE HP + +IY + K+ E+KK G++PDT
Sbjct: 356 LMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSC 415
Query: 495 VLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMG 554
+ D+ K+KLL H+EKLA+ +G+I +R++KN IC+D HT K++S L
Sbjct: 416 IHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRN 475
Query: 555 REIIVRDVTRFHHFKDGFCSCRDYW 579
REI++++ R HHF+DG CSC D W
Sbjct: 476 REIVLQEGARVHHFRDGKCSCNDSW 500
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 18/296 (6%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALEL 58
++I +WN ++S + + A A +M + D +TWNS+ +GY G ++AL++
Sbjct: 21 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 80
Query: 59 FSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDI--SGAVQNALISM 116
M ++ + P+ + + S C+ +N N + +I E + + A + L+ +
Sbjct: 81 IGKM-KEKGVAPNVVSWTAIFSGCS--KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 137
Query: 117 YAKT----GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV 172
G EV + ++ I DA TAL+D Y K GD+ A +IF ++N+ +
Sbjct: 138 LGCLSLLHSGKEVHGFCLRKNLIC--DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA 195
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
+W M++GY G ++ + F M + G P++ T ++LSV + G + +
Sbjct: 196 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK-YFDL 254
Query: 233 IRSREDL--SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQH 286
+RSR + +I + ++ + ++G +D A + D W + + + H
Sbjct: 255 MRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 310
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 347 bits (891), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 288/486 (59%), Gaps = 35/486 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++++ ++ A F +R+ +TW++M+ GY+Q+G EA++LFS M + +
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF-SAGI 318
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KP ++T+ L+AC+++ + GKQ+HS++++ F+ R
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE----------------------RH 356
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ A TAL+D YAK G + AR+ FD L+ RDV WT++I GYVQN N+
Sbjct: 357 L-----------FATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNE 405
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+AL L+R M G PN T+A++L S A+L GKQ+H I+ L + +G+AL
Sbjct: 406 EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
TMY+K GS+++ VF N D VSW++MI L+ +G G+EA+ELFE+MLA G+EPD
Sbjct: 466 TMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+T+V ++SAC+H G VE+G YFN+M+ ++P + HYACM+DL RAG L+EA +FIE
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
+ I+ + W LLS+CK + +L A E+L+ + S Y L+ +Y+A G+ D
Sbjct: 585 SANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRD 644
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
++ K M GV KE G SW+E++N+ H+F D++HP +E ++ + ++ + GF
Sbjct: 645 VERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGF 704
Query: 489 IPDTDS 494
+ DS
Sbjct: 705 VTVLDS 710
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 196/381 (51%), Gaps = 42/381 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHG---FDKEALELFSSMLQD 65
N++++ + G++ A + F + +D+V+WNS+I GY+Q+G ++LF M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RA 111
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
+ P+ +TLA A ++L++ +G+Q H+ +++ V +L+ MY K G VE
Sbjct: 112 QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVE- 170
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
DG ++F + R+ W+ M+ GY G
Sbjct: 171 ----------------------DGL----------KVFAYMPERNTYTWSTMVSGYATRG 198
Query: 186 LNDDALELFRAM--TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
++A+++F KE + + A+LS + + G+QIH I++ +++
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
NAL+TMY+K S++ A K+F+ + ++++WS+M+ +Q+G EA++LF +M + G
Sbjct: 259 SNALVTMYSKCESLNEACKMFD-SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
I+P T VGVL+AC+ + +E+G+ + + + E L ++D+Y +AG L +A
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADA 376
Query: 364 FKFIENMPIEPDVIAWGSLLS 384
K + + E DV W SL+S
Sbjct: 377 RKGFDCLQ-ERDVALWTSLIS 396
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 38/322 (11%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + + ++ ++ +G + A F + ERD+ W S+I+GY Q+ ++EAL L+ M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ + + P+ T+AS L AC++L + LGKQ+H + I+ F + + +AL +MY+K G
Sbjct: 415 -KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E DG +F N+DVV+W AMI G
Sbjct: 474 LE-----------------------DG----------NLVFRRTPNKDVVSWNAMISGLS 500
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
NG D+ALELF M EG P+ T ++S S + G + + + + L
Sbjct: 501 HNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPK 559
Query: 243 VGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
V + ++ + ++AG + A++ ++ W ++ A HG E + EK++
Sbjct: 560 VDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLM 619
Query: 301 ALGIEPDHITYVGVLSACTHVG 322
ALG + TYV + T +G
Sbjct: 620 ALG-SRESSTYVQLSGIYTALG 640
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 180/423 (42%), Gaps = 89/423 (21%)
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
+ L P TL L+ + N+ G+ +H IIRT S +Q+A
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRT--GASTCIQHA------------- 52
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
L++ YAK G + A IF+++ +DVV+W ++I GY QNG
Sbjct: 53 ------------------NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNG 94
Query: 186 ---LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+ ++LFR M + PN++TLA + S S G+Q HA ++ I
Sbjct: 95 GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIY 154
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML-- 300
V +L+ MY KAG +++ KVF + N T +WS+M+ A G EEAI++F L
Sbjct: 155 VDTSLVGMYCKAGLVEDGLKVFAYMPERN-TYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 301 -ALGIEPDHITYVGVLS---ACTHVGL--------VEQGRSYF----NLMASVHKIEPTL 344
G + D++ + VLS A +VGL ++ G F N + +++ +L
Sbjct: 214 KEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 345 SH---------------YACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSC 386
+ ++ M+ Y + G EA K M I+P +L++C
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 387 KVYKNVD--------LAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMND 438
++ L K+ ER L A +AL ++Y+ G DA K + +
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLF-------ATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 439 RGV 441
R V
Sbjct: 386 RDV 388
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 345 bits (884), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 186/473 (39%), Positives = 292/473 (61%), Gaps = 9/473 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ + G+I++ F +M +RD+V+WN +I+ Y +G ++A+ +F M Q+S+L
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
K D+ T+ STLSAC+ L+N+ +G++I+ +++ TEF++S + NAL+ M+ K G ++ AR
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARA 203
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V + + D + +T+++ GY G I AR +F+ +DVV WTAM+ GYVQ D
Sbjct: 204 VFDS--MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+ALELFR M G RP++F L ++L+ ++ +L GK IH +R + VG AL+
Sbjct: 262 EALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALV 321
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MYAK G I+ A +VF I DT SW+S+I LA +G+ A++L+ +M +G+ D
Sbjct: 322 DMYAKCGCIETALEVFYEI-KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
IT+V VL+AC H G V +GR F+ M H ++P H +C+IDL RAGLL EA + I+
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 369 NMPIEPD---VIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
M E D V + SLLS+ + Y NV +A+ AE+L +E +S A++ LA+VY++ +
Sbjct: 441 KMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSL--HPQKDEIYKMM 476
WED +R+ M D G++K G S +EI H F D L HP+ DEI M+
Sbjct: 501 WEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 76/383 (19%)
Query: 36 IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIH 95
++ +N M+ + L LF L+ L PD FTL L + L + G+++H
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGE-LRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 96 SYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGD 155
Y ++ + V N+L+ MYA LG
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYAS---------------------------------LGK 96
Query: 156 ITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLS 214
I ++FD + RDVV+W +I YV NG +DA+ +F+ M++E + + T+ + LS
Sbjct: 97 IEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLS 156
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF------NLIC 268
S +L G++I+ + E +S+ +GNAL+ M+ K G +D A+ VF N+ C
Sbjct: 157 ACSALKNLEIGERIYRFVVTEFE-MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKC 215
Query: 269 WNN------------------------DTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
W + D V W++M+ Q +EA+ELF M GI
Sbjct: 216 WTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
Query: 305 EPDHITYVGVLSACTHVGLVEQGR---SYFNL-MASVHKIEPTLSHYACMIDLYGRAGLL 360
PD+ V +L+ C G +EQG+ Y N +V K+ T ++D+Y + G +
Sbjct: 276 RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT-----ALVDMYAKCGCI 330
Query: 361 QEAFKFIENMPIEPDVIAWGSLL 383
+ A + + E D +W SL+
Sbjct: 331 ETALEVFYEIK-ERDTASWTSLI 352
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 41/306 (13%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFS 60
R +++ W M+ ++++GRID A F++ +D+V W +M+ GY Q EALELF
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M Q + ++PD F L S L+ C + GK IH YI + V AL+ MYAK
Sbjct: 269 CM-QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G +E TAL ++F ++ RD +WT++I G
Sbjct: 328 GCIE-------------------TAL--------------EVFYEIKERDTASWTSLIYG 354
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQI-HASAIRSREDL 239
NG++ AL+L+ M G R ++ T A+L+ + G + G++I H+ R
Sbjct: 355 LAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQP 414
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTV---SWSSMIIALAQHG---LGEEAI 293
+ LI + +AG +D A+++ + + +D + S++ A +G + E
Sbjct: 415 KSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVA 474
Query: 294 ELFEKM 299
E EK+
Sbjct: 475 EKLEKV 480
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 344 bits (883), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 301/547 (55%), Gaps = 74/547 (13%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N++I ++ GR+ A F M ++I++W ++++GY Q+ KEA+ELF+SM L
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGL 346
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYII---------------------------RT 101
KPD + +S L++C +L + G Q+H+Y I R
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 102 EFDISGAVQ----NALISMYAKTG-------GVEVAR----RVVEQSEIS---------- 136
FDI A NA+I Y++ G + + R R++ S ++
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 137 -------------------DLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAM 177
+LD A +AL+D Y+ + +R +FD ++ +D+V W +M
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 178 IVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE 237
GYVQ N++AL LF + RP+ FT A M++ + AS+ G++ H ++
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 238 DLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
+ + + NAL+ MYAK GS ++A K F+ + D V W+S+I + A HG G++A+++ E
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 298 KMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRA 357
KM++ GIEP++IT+VGVLSAC+H GLVE G F LM IEP HY CM+ L GRA
Sbjct: 646 KMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRA 704
Query: 358 GLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALA 417
G L +A + IE MP +P I W SLLS C NV+LA+ AAE +L +P +SG+++ L+
Sbjct: 705 GRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Query: 418 NVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMD 477
N+Y++ G W +A K+R+ M GV KE G SW+ I EVHIF ++D H + ++IY+++D
Sbjct: 765 NIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLD 824
Query: 478 KIWEEIK 484
+ +I+
Sbjct: 825 DLLVQIR 831
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 199/390 (51%), Gaps = 50/390 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + ++I ++ G ID A F + E+ VTW +MI+G + G +L+LF +
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++D+ + PD + L++ LSAC+ L + GKQIH++I+R ++ ++ N LI
Sbjct: 241 MEDNVV-PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI-------- 291
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
D Y K G + A ++F+ + N+++++WT ++ GY
Sbjct: 292 -------------------------DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
QN L+ +A+ELF +M+K G +P+ + +++L+ + +L G Q+HA I++
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLG---EEAIELFEKM 299
V N+LI MYAK + +A+KVF++ D V +++MI ++ G EA+ +F M
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFA-AADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 300 LALGIEPDHITYVGVLSAC---THVGLVEQGRSYFNLMASVHKIEPTLSHYA--CMIDLY 354
I P +T+V +L A T +GL +Q + + K L +A +ID+Y
Sbjct: 446 RFRLIRPSLLTFVSLLRASASLTSLGLSKQ------IHGLMFKYGLNLDIFAGSALIDVY 499
Query: 355 GRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
L+++ + M ++ D++ W S+ +
Sbjct: 500 SNCYCLKDSRLVFDEMKVK-DLVIWNSMFA 528
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 211/461 (45%), Gaps = 75/461 (16%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
NI+I+L+ +G + A F++M ER++V+W++M++ N HG +E+L +F +
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 69 KPDKFTLASTLSACTNLENMN--LGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
P+++ L+S + AC+ L+ + Q+ S+++++ FD V LI Y K G ++ A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
R V FD+L + V WT MI G V+ G
Sbjct: 203 RLV---------------------------------FDALPEKSTVTWTTMISGCVKMGR 229
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+ +L+LF + ++ P+ + L+ +LS S L GKQIHA +R ++ S+ N
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
LI Y K G + A K+FN + N + +SW++++ Q+ L +EA+ELF M G++P
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 307 DHITYVGVLSACTH---VGLVEQGRSYF---NLMASVHKIEPTLSHYA------------ 348
D +L++C +G Q +Y NL + + YA
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 349 ------------CMIDLYGRAGL---LQEAFKFIENMP---IEPDVIAWGSLLSSCKVYK 390
MI+ Y R G L EA +M I P ++ + SLL +
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 391 NVDLAKIAAERLLLIEPDNSGAY--SALANVYSACGKWEDA 429
++ L+K L+ N + SAL +VYS C +D+
Sbjct: 469 SLGLSK-QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 137/271 (50%), Gaps = 17/271 (6%)
Query: 137 DLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRA 196
+LD L++ Y++ G + AR++F+ + R++V+W+ M+ +G+ +++L +F
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 197 MTK-EGPRPNSFTLAAMLSVSS----RGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
+ PN + L++ + S RG + Q+ + ++S D + VG LI Y
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
K G+ID A+ VF+ + TV+W++MI + G +++LF +++ + PD
Sbjct: 194 LKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASV--HKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
VLSAC+ + +E G+ + A + + +E S +ID Y + G + A K
Sbjct: 253 STVLSACSILPFLEGGK---QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAE 400
MP ++I+W +LLS YK L K A E
Sbjct: 310 MP-NKNIISWTTLLSG---YKQNALHKEAME 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC 268
A +L + + L++ +H I +L + N LI +Y++AG + A+KVF +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELF-EKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
N VSWS+M+ A HG+ EE++ +F E P+ + AC+ GL +G
Sbjct: 107 ERN-LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRG 163
Query: 328 R-SYFNLMASVHKIEPTLSHY--ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
R F L + + K Y +ID Y + G + A + +P E + W +++S
Sbjct: 164 RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMIS 222
Query: 385 SC 386
C
Sbjct: 223 GC 224
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALEL 58
R + WN +IS + N G AL ++M E + +T+ +++ + G ++ L+
Sbjct: 619 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 59 FSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
F ML+ ++P+ +S +N +++ I + + V +L+S A
Sbjct: 679 FELMLR-FGIEPETEHYVCMVSLLGRAGRLNKAREL---IEKMPTKPAAIVWRSLLSGCA 734
Query: 119 KTGGVEVARRVVEQSEISDL-DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV 172
K G VE+A E + +SD D+ +FT L + YA G T A+++ + ++ VV
Sbjct: 735 KAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 198/644 (30%), Positives = 324/644 (50%), Gaps = 100/644 (15%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R I SWN SMI+GY G +L LF M
Sbjct: 194 RDIVSWN-------------------------------SMISGYLALGDGFSSLMLFKEM 222
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTG 121
L+ KPD+F+ S L AC+++ + +GK+IH + +R+ + V +++ MY+K G
Sbjct: 223 LK-CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYG 281
Query: 122 GVEVARRV----------------------------------------VEQSEISDLDAI 141
V A R+ ++ I+ ++ +
Sbjct: 282 EVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL 341
Query: 142 AFTALLDG-------------------------YAKLGDITPARQIFDSLRNRDVVAWTA 176
+A+L+G Y + G + A IFD + ++V++W +
Sbjct: 342 PASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 177 MIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR 236
+I YVQNG N ALELF+ + P+S T+A++L + SL+ G++IHA ++SR
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELF 296
+ + N+L+ MYA G +++A+K FN I D VSW+S+I+A A HG G ++ LF
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHILL-KDVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 297 EKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGR 356
+M+A + P+ T+ +L+AC+ G+V++G YF M + I+P + HY CM+DL GR
Sbjct: 521 SEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGR 580
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSAL 416
G A +F+E MP P WGSLL++ + +K++ +A+ AAE++ +E DN+G Y L
Sbjct: 581 TGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLL 640
Query: 417 ANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMM 476
N+Y+ G+WED +I+ LM +G+ + S +E + + H+F D H ++IY+++
Sbjct: 641 LNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
Query: 477 DKIWEEIKKLGFIPDTDSVLH-DLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKN 535
D + + + S L + ++ + R HS +LA FG+IST + + N
Sbjct: 701 DVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNN 760
Query: 536 LRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
RIC CH ++ S+L REI+V D FHHF +G CSC +YW
Sbjct: 761 TRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 194/382 (50%), Gaps = 41/382 (10%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +ISL+M G A F++M ERDIV+WNSMI+GY G +L LF ML+
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK-CGF 227
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KPD+F+ S L AC+++ + +GK+IH + +R
Sbjct: 228 KPDRFSTMSALGACSHVYSPKMGKEIHCHAVR---------------------------- 259
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
S I D + T++LD Y+K G+++ A +IF+ + R++VAW MI Y +NG
Sbjct: 260 ----SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 189 DALELFRAMTKE-GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
DA F+ M+++ G +P+ T +L S ++ G+ IH A+R + + AL
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
I MY + G + +A+ +F+ + N +SW+S+I A Q+G A+ELF+++ + PD
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKN-VISWNSIIAAYVQNGKNYSALELFQELWDSSLVPD 430
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
T +L A + +GR + T+ + ++ +Y G L++A K
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS-LVHMYAMCGDLEDARKCF 489
Query: 368 ENMPIEPDVIAWGSLLSSCKVY 389
++ ++ DV++W S++ + V+
Sbjct: 490 NHILLK-DVVSWNSIIMAYAVH 510
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 219/475 (46%), Gaps = 82/475 (17%)
Query: 24 ALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACT 83
AL F +M++ D WN MI G+ G EA++ +S M+ + +K D FT + +
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFTYPFVIKSVA 141
Query: 84 NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAF 143
+ ++ GK+IH+ +I+ F V N+LIS+Y K G A +V E E+ + D +++
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE--EMPERDIVSW 199
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
+++ GY LGD G+ +L LF+ M K G +
Sbjct: 200 NSMISGYLALGD------------------------GF-------SSLMLFKEMLKCGFK 228
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR-EDLSISVGNALITMYAKAGSIDNAQK 262
P+ F+ + L S S GK+IH A+RSR E + V +++ MY+K G + A++
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL-GIEPDHITYVGVLSACTHV 321
+FN + N V+W+ MI A++G +A F+KM G++PD IT + +L A
Sbjct: 289 IFNGMIQRN-IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA-- 345
Query: 322 GLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGS 381
+ +GR+ A P + +ID+YG G L+ A + M E +VI+W S
Sbjct: 346 --ILEGRTIHGY-AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNS 401
Query: 382 LL----------SSCKVYKNV-------DLAKIA------AERLLLIEPDNSGAY----- 413
++ S+ ++++ + D IA AE L L E AY
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 414 --------SALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFG 460
++L ++Y+ CG EDA RK N +K + + + VH FG
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDA---RKCFNHILLKDVVSWNSIIMAYAVHGFG 513
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 173/406 (42%), Gaps = 52/406 (12%)
Query: 76 ASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEI 135
A+ LS C + N + K + S +T +G S +K + + R ++
Sbjct: 3 ATLLSQCYRIYNSDACKCVSSENHQTTGKRNGNRNLEFDSGISKPARLVLRDRYKVTKQV 62
Query: 136 SDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFR 195
+D A T L G+A + A Q+FD + D W MI G+ GL +A++ +
Sbjct: 63 ND---PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYS 119
Query: 196 AMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAG 255
M G + ++FT ++ + +SL GK+IHA I+ + V N+LI++Y K G
Sbjct: 120 RMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLG 179
Query: 256 SIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVL 315
+A+KVF + D VSW+SMI G G ++ LF++ML G +PD + + L
Sbjct: 180 CAWDAEKVFEEMP-ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSAL 238
Query: 316 SACTHV------------------------------------GLVEQGRSYFNLMASVHK 339
AC+HV G V FN M
Sbjct: 239 GACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM----- 293
Query: 340 IEPTLSHYACMIDLYGRAGLLQEAF----KFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
I+ + + MI Y R G + +AF K E ++PDVI +LL + + + +
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIH 353
Query: 396 KIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
A R L + +AL ++Y CG+ + A I M ++ V
Sbjct: 354 GYAMRRGFL---PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 281/459 (61%), Gaps = 8/459 (1%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
+D A F +S ++ + +MI G+ G + + L+ M+ +S L PD + + S L
Sbjct: 123 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVL-PDNYVITSVLK 181
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
AC ++ + ++IH+ +++ F S +V ++ +Y K+G + A+++ + E+ D D
Sbjct: 182 AC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFD--EMPDRDH 235
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
+A T +++ Y++ G I A ++F ++ +D V WTAMI G V+N + ALELFR M E
Sbjct: 236 VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME 295
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
N FT +LS S +L G+ +H+ R +LS VGNALI MY++ G I+ A
Sbjct: 296 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 355
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
++VF ++ + D +S+++MI LA HG EAI F M+ G P+ +T V +L+AC+H
Sbjct: 356 RRVFRVM-RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSH 414
Query: 321 VGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWG 380
GL++ G FN M V +EP + HY C++DL GR G L+EA++FIEN+PIEPD I G
Sbjct: 415 GGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLG 474
Query: 381 SLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
+LLS+CK++ N++L + A+RL E +SG Y L+N+Y++ GKW+++ +IR+ M D G
Sbjct: 475 TLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSG 534
Query: 441 VKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
++KE G S +E+ N++H F D HP K+ IY+ + ++
Sbjct: 535 IEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 573
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 163/368 (44%), Gaps = 70/368 (19%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + +MI+ + G I AL FQ + +D V W +MI G ++ +ALELF M
Sbjct: 233 RDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM 292
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
Q ++ ++FT LSAC++L + LG+ +HS++ ++S V NALI+MY++ G
Sbjct: 293 -QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGD 351
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ ARRV F +R++DV+++ MI G
Sbjct: 352 INEARRV---------------------------------FRVMRDKDVISYNTMISGLA 378
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G + +A+ FR M G RPN TL A+L+ S G L D+ +
Sbjct: 379 MHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLL---------------DIGLE 423
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
V N++ ++VFN+ + ++ L + G EEA E +
Sbjct: 424 VFNSM-------------KRVFNV---EPQIEHYGCIVDLLGRVGRLEEAYRFIEN---I 464
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
IEPDHI +LSAC G +E G + P Y + +LY +G +E
Sbjct: 465 PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN--PDSGTYVLLSNLYASSGKWKE 522
Query: 363 AFKFIENM 370
+ + E+M
Sbjct: 523 STEIRESM 530
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 76/343 (22%)
Query: 74 TLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
TL S L +C N+ ++ IH+ IIRT
Sbjct: 77 TLISVLRSCKNIAHV---PSIHAKIIRT-------------------------------- 101
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
D DA L+ + L + A +F + N +V +TAMI G+V +G + D + L
Sbjct: 102 -FHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSL 160
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
+ M P+++ + ++L + L ++IHA ++ S SVG ++ +Y K
Sbjct: 161 YHRMIHNSVLPDNYVITSVL----KACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGK 216
Query: 254 AGSIDNAQKVFN-------------LICWN-----------------NDTVSWSSMIIAL 283
+G + NA+K+F+ + C++ DTV W++MI L
Sbjct: 217 SGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGL 276
Query: 284 AQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPT 343
++ +A+ELF +M + + T V VLSAC+ +G +E GR + + + ++E
Sbjct: 277 VRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN-QRME-- 333
Query: 344 LSHYA--CMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
LS++ +I++Y R G + EA + M + DVI++ +++S
Sbjct: 334 LSNFVGNALINMYSRCGDINEARRVFRVMR-DKDVISYNTMIS 375
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 106/200 (53%), Gaps = 12/200 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I+++ G I+ A F+ M ++D++++N+MI+G HG EA+ F M+ +
Sbjct: 340 NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV-NRGF 398
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVA 126
+P++ TL + L+AC++ +++G ++ + + R F++ +++ ++ + + G +E A
Sbjct: 399 RPNQVTLVALLNACSHGGLLDIGLEVFNSMKRV-FNVEPQIEHYGCIVDLLGRVGRLEEA 457
Query: 127 RRVVEQSEISDLDAIAFTALLD-----GYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
R +E I + D I LL G +LG+ A+++F+S N D + + Y
Sbjct: 458 YRFIENIPI-EPDHIMLGTLLSACKIHGNMELGE-KIAKRLFES-ENPDSGTYVLLSNLY 514
Query: 182 VQNGLNDDALELFRAMTKEG 201
+G ++ E+ +M G
Sbjct: 515 ASSGKWKESTEIRESMRDSG 534
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 136/344 (39%), Gaps = 77/344 (22%)
Query: 173 AWTAMIVGYVQNGLND----DALELFRAMT------KEGPRPNSFTLA---AMLSVSSRG 219
W +I+ NGL + + A+T + P N+ L+ ++SV
Sbjct: 26 TWIGLIITENCNGLESSIEREMISSLAAITGGPSTFRRDPDSNTLRLSRRKTLISVLRSC 85
Query: 220 ASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSM 279
++ H IHA IR+ D V LI + + S+D A VF+ + N + +++M
Sbjct: 86 KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS-NPNVYLYTAM 144
Query: 280 IIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC-------THVGLVEQG----R 328
I G + + L+ +M+ + PD+ VL AC H +++ G R
Sbjct: 145 IDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSR 204
Query: 329 SYFNLMASVHKIE-------------PTLSHYAC--MIDLYGRAGLLQEAFKFIENMPIE 373
S M ++ P H A MI+ Y G ++EA + +++ I+
Sbjct: 205 SVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIK 264
Query: 374 PDVIAWGSLL----------SSCKVYKNVDLAKIAAERL----LLIEPDNSGAY------ 413
D + W +++ + ++++ + + ++A +L + GA
Sbjct: 265 -DTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWV 323
Query: 414 ----------------SALANVYSACGKWEDAAKIRKLMNDRGV 441
+AL N+YS CG +A ++ ++M D+ V
Sbjct: 324 HSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 367
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 338 bits (868), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 200/619 (32%), Positives = 324/619 (52%), Gaps = 50/619 (8%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELFS 60
+ +WNI+I + G+ D A+ Q+M D+ TW +MI+G +G +AL++F
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M + + P+ T+ S +SAC+ L+ +N G ++HS ++ F V N+L+ MY+K
Sbjct: 342 KMFL-AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 121 GGVEVARRVVEQSEISDL---------------------------------DAIAFTALL 147
G +E AR+V + + D+ + I + ++
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 148 DGYAKLGDITPARQIF-----DSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP 202
GY K GD A +F D R+ W +I GY+QNG D+ALELFR M
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 203 RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQK 262
PNS T+ ++L + ++IH +R D +V NAL YAK+G I+ ++
Sbjct: 521 MPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRT 580
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
+F L D ++W+S+I HG A+ LF +M GI P+ T ++ A +G
Sbjct: 581 IF-LGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMG 639
Query: 323 LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
V++G+ F +A+ + I P L H + M+ LYGRA L+EA +FI+ M I+ + W S
Sbjct: 640 NVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
Query: 383 LSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
L+ C+++ ++D+A AAE L +EP+N+ S ++ +Y+ K + + K D +K
Sbjct: 700 LTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLK 759
Query: 443 KEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIE 502
K G SW+E++N +H F D D +Y +++K + +L D + +E E
Sbjct: 760 KPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEK----MSRLDNRSDQYNGELWIEEE 815
Query: 503 VKDKLLRYHSEKLAIAFGIIST--PENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVR 560
+++ HSEK A+AFG+IS+ TT+RI+KNLR+C DCH K++SK G +I++
Sbjct: 816 GREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLE 875
Query: 561 DVTRFHHFKDGFCSCRDYW 579
D HHFK+G CSC+DYW
Sbjct: 876 DTRCLHHFKNGDCSCKDYW 894
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 193/416 (46%), Gaps = 42/416 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++S++ G I A F M ER++ TW++MI Y++ +E +LF M++D L P
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL-P 179
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D F L C N ++ GK IHS +I+ V N+++++YAK G ++ A +
Sbjct: 180 DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 239
Query: 131 EQSEISDLDA---------------------------------IAFTALLDGYAKLGDIT 157
+ D+ A + + L+ GY +LG
Sbjct: 240 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 158 PARQIFDSLR----NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAML 213
A + + DV WTAMI G + NG+ AL++FR M G PN+ T+ + +
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 214 SVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDT 273
S S +N G ++H+ A++ + VGN+L+ MY+K G +++A+KVF+ + N D
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV-KNKDV 418
Query: 274 VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNL 333
+W+SMI Q G +A ELF +M + P+ IT+ ++S G + F
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 334 MASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE---PDVIAWGSLLSSC 386
M K++ + + +I Y + G EA + M P+ + SLL +C
Sbjct: 479 MEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 12/305 (3%)
Query: 135 ISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
++ D T LL YAK G I AR++FDS+R R++ W+AMI Y + + +LF
Sbjct: 110 FTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
R M K+G P+ F +L + + GK IH+ I+ + V N+++ +YAK
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
G +D A K F + D ++W+S+++A Q+G EEA+EL ++M GI P +T+ +
Sbjct: 230 GELDFATKFFRRM-RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM---P 371
+ +G + M + I + + MI G+ +A M
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETF-GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 372 IEPDVIAWGSLLSSCKVYKNV----DLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
+ P+ + S +S+C K + ++ IA + + D+ ++L ++YS CGK E
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI---DDVLVGNSLVDMYSKCGKLE 404
Query: 428 DAAKI 432
DA K+
Sbjct: 405 DARKV 409
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 287/481 (59%), Gaps = 3/481 (0%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N MI+ + I+ A F +MSERD+V+WNSMI+GY+Q G ++ +++ +ML S
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KP+ T+ S AC ++ G ++H +I + ++ NA+I YAK G ++ AR
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ + E+S+ D++ + A++ GY G + A +F + + + W AMI G +QN ++
Sbjct: 291 LFD--EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHE 348
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+ + FR M + G RPN+ TL+++L + ++L GK+IHA AIR+ D +I V ++I
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
YAK G + AQ+VF+ C + ++W+++I A A HG + A LF++M LG +PD
Sbjct: 409 DNYAKLGFLLGAQRVFD-NCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDD 467
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+T VLSA H G + + F+ M + + IEP + HYACM+ + RAG L +A +FI
Sbjct: 468 VTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFIS 527
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
MPI+P WG+LL+ V ++++A+ A +RL +EP+N+G Y+ +AN+Y+ G+WE+
Sbjct: 528 KMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEE 587
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
A +R M G+KK G+SW+E + + F A+DS + E+Y++++ + E + +
Sbjct: 588 AEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEY 647
Query: 489 I 489
I
Sbjct: 648 I 648
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/573 (22%), Positives = 246/573 (42%), Gaps = 104/573 (18%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELF-----SSMLQD 65
+IS + R AL F +++ R+ ++N+++ Y +A LF SS
Sbjct: 63 LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSS 122
Query: 66 SSLKPDKFTLASTLSACTNLENMNLG---KQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ +PD +++ L A + ++ LG +Q+H ++IR FD V N +I+ Y K
Sbjct: 123 DAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDN 182
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E AR+V + E+S+ D +++ +++ GY+
Sbjct: 183 IESARKVFD--EMSERDVVSWNSMISGYS------------------------------- 209
Query: 183 QNGLNDDALELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
Q+G +D ++++AM +PN T+ ++ + + L G ++H I + + +
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
S+ NA+I YAK GS+D A+ +F+ + D+V++ ++I HGL +EA+ LF +M +
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVKEAMALFSEMES 328
Query: 302 LGI-------------------------------EPDHITYVGVLSACTHVGLVEQGRSY 330
+G+ P+ +T +L + T+ ++ G+
Sbjct: 329 IGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKE- 387
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
+ A + + + +ID Y + G L A + +N + +IAW +++++ V+
Sbjct: 388 IHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHG 446
Query: 391 NVDLAKIAAERL--LLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
+ D A +++ L +PD+ L V SA D+ + + + K +
Sbjct: 447 DSDSACSLFDQMQCLGTKPDD----VTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPG 502
Query: 449 WLEIQNEVHIFGAEDSLHPQKDEIYKM----MDKIWEEIKKLGFIPDTDSVLHDLEIEVK 504
V + L + I KM + K+W G + + SVL DLEI
Sbjct: 503 VEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVW------GALLNGASVLGDLEIA-- 554
Query: 505 DKLLRYHSEKLAIAFGIISTPENT-TLRIMKNL 536
R+ ++L PENT IM NL
Sbjct: 555 ----RFACDRL-----FEMEPENTGNYTIMANL 578
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 8/223 (3%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
++ +IS +M G + A+A F +M + TWN+MI+G Q+ +E + F M++
Sbjct: 301 VTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRC 360
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
S +P+ TL+S L + T N+ GK+IH++ IR D + V ++I YAK G +
Sbjct: 361 GS-RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLG 419
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAWTAMIVGY 181
A+RV + + D IA+TA++ YA GD A +FD ++ D V TA++ +
Sbjct: 420 AQRVFDNCK--DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAF 477
Query: 182 VQNGLNDDALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLN 223
+G +D A +F +M TK P A M+SV SR L+
Sbjct: 478 AHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLS 520
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 320/573 (55%), Gaps = 37/573 (6%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
MI+ +M+ G +D A+ F ++E++ +T+N+++AG+ ++G +AL+LF+ MLQ
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D F+L S + AC + + +QIH + I+ + +Q AL+ M + + A +
Sbjct: 417 D-FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+Q S+LD+ A T++I GY +NGL D A
Sbjct: 476 DQWP-SNLDSSK------------------------------ATTSIIGGYARNGLPDKA 504
Query: 191 LELF-RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
+ LF R + ++ + +L +L+V G QIH A+++ IS+GN+LI+
Sbjct: 505 VSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLIS 564
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MYAK D+A K+FN + +D +SW+S+I G+EA+ L+ +M I+PD I
Sbjct: 565 MYAKCCDSDDAIKIFNTM-REHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDII 623
Query: 310 TYVGVLSAC--THVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
T V+SA T + R F M +++ IEPT HY + + G GLL+EA I
Sbjct: 624 TLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTI 683
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
+MP++P+V +LL SC+++ N +AK A+ +L +P+ Y +N+YSA G W
Sbjct: 684 NSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWH 743
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLG 487
+ IR+ M +RG +K SW+ +N++H F A D+ HPQ+ +IY+ ++ + E K+G
Sbjct: 744 RSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVG 803
Query: 488 FIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIIST-PENTTLRIMKNLRICNDCHTAI 546
+ P+T+ VL +++ +K L +HS KLA+ +GI+S+ +R+MKN+ +C DCH
Sbjct: 804 YEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFF 863
Query: 547 KFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
K+IS ++ REI++RD + FHHF +G CSCRD W
Sbjct: 864 KYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 156/310 (50%), Gaps = 37/310 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS ++ G A+ F +S +V++ ++I+G+++ + EAL++F M + +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+P+++T + L+AC + +LG QIH I+++ F S V N+L+S+Y K G
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG------ 231
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
S D + ++FD + RDV +W ++ V+ G +
Sbjct: 232 -------SSCDDVL------------------KLFDEIPQRDVASWNTVVSSLVKEGKSH 266
Query: 189 DALELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
A +LF M + EG +SFTL+ +LS + + L G+++H AIR +SV NAL
Sbjct: 267 KAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNAL 326
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
I Y+K + + ++ ++ D V+++ MI A G+ + A+E+F + E +
Sbjct: 327 IGFYSKFWDMKKVESLYEMM-MAQDAVTFTEMITAYMSFGMVDSAVEIFANV----TEKN 381
Query: 308 HITYVGVLSA 317
ITY +++
Sbjct: 382 TITYNALMAG 391
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 212 MLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN 271
+L +S++ + K +HAS ++ RE+ +GNALI+ Y K G A VF + +
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREE-KTRLGNALISTYLKLGFPREAILVFVSLS-SP 143
Query: 272 DTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSACTHVGLVEQGRSY 330
VS++++I ++ L EA+++F +M G ++P+ T+V +L+AC V G
Sbjct: 144 TVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQI 203
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGR--AGLLQEAFKFIENMPIEPDVIAWGSLLSSC-- 386
L+ + + M LY + + K + +P + DV +W +++SS
Sbjct: 204 HGLIVKSGFLNSVFVSNSLM-SLYDKDSGSSCDDVLKLFDEIP-QRDVASWNTVVSSLVK 261
Query: 387 --KVYKNVDL 394
K +K DL
Sbjct: 262 EGKSHKAFDL 271
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
I+ N +IS++ D A+ F M E D+++WNS+I+ Y EAL L+S M
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRM-N 614
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI-IRTEFDISGAVQN--ALISMYAKTG 121
+ +KPD TL +SA E+ L ++ ++T +DI ++ A + + G
Sbjct: 615 EKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWG 674
Query: 122 GVEVARRVVE----QSEISDLDAI 141
+E A + Q E+S L A+
Sbjct: 675 LLEEAEDTINSMPVQPEVSVLRAL 698
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 281/463 (60%), Gaps = 6/463 (1%)
Query: 13 SLHM--NSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
S+HM + G ++ A F + RD+V+WN +I GY + G ++A+ ++ +++ +KP
Sbjct: 197 SIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK-LMESEGVKP 255
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D T+ +S+C+ L ++N GK+ + Y+ ++ + NAL+ M++K G + ARR+
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+ E + +++T ++ GYA+ G + +R++FD + +DVV W AMI G VQ DA
Sbjct: 316 DNLEKRTI--VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 373
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L LF+ M +P+ T+ LS S+ +L+ G IH + L++++G +L+ M
Sbjct: 374 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 433
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK G+I A VF+ I N +++++++I LA HG AI F +M+ GI PD IT
Sbjct: 434 YAKCGNISEALSVFHGIQTRN-SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 492
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
++G+LSAC H G+++ GR YF+ M S + P L HY+ M+DL GRAGLL+EA + +E+M
Sbjct: 493 FIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Query: 371 PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAA 430
P+E D WG+LL C+++ NV+L + AA++LL ++P +SG Y L +Y WEDA
Sbjct: 553 PMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAK 612
Query: 431 KIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIY 473
+ R++MN+RGV+K G S +E+ V F D P+ ++IY
Sbjct: 613 RARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIY 655
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 172/376 (45%), Gaps = 66/376 (17%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL--KPDKFTLAST 78
+D ++ + + +I +WN I G+++ KE+ L+ ML+ +PD FT
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
C +L +LG I ++++ ++ V NA I M+A G +E AR+V ++S + DL
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
+++ L++GY K+G+ + A+ +++ M
Sbjct: 223 --VSWNCLINGYKKIGEA-------------------------------EKAIYVYKLME 249
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
EG +P+ T+ ++S S LN GK+ + + ++I + NAL+ M++K G I
Sbjct: 250 SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIH 309
Query: 259 NAQKVFN------LICWNN------------------------DTVSWSSMIIALAQHGL 288
A+++F+ ++ W D V W++MI Q
Sbjct: 310 EARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKR 369
Query: 289 GEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA 348
G++A+ LF++M +PD IT + LSAC+ +G ++ G + + + + ++
Sbjct: 370 GQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG-IWIHRYIEKYSLSLNVALGT 428
Query: 349 CMIDLYGRAGLLQEAF 364
++D+Y + G + EA
Sbjct: 429 SLVDMYAKCGNISEAL 444
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 40/295 (13%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+I SW MIS + G +D++ F M E+D+V WN+MI G Q ++AL LF M
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
Q S+ KPD+ T+ LSAC+ L +++G IH YI + ++ A+ +L+ MYAK G
Sbjct: 381 -QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG- 438
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+I+ A +F ++ R+ + +TA+I G
Sbjct: 439 --------------------------------NISEALSVFHGIQTRNSLTYTAIIGGLA 466
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G A+ F M G P+ T +LS G + G+ + S ++SR +L+
Sbjct: 467 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD-YFSQMKSRFNLNPQ 525
Query: 243 VGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEA 292
+ + ++ + +AG ++ A ++ + D W +++ HG LGE+A
Sbjct: 526 LKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKA 580
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 328 bits (841), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 290/541 (53%), Gaps = 73/541 (13%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I ++ ++ A A + M D+V+WNSMI G + G EAL +F M + +K
Sbjct: 268 LIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM-HERDMKI 326
Query: 71 DKFTLASTLSACTNLEN--MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
D FT+ S L+ C L M + H I++T + V NAL+ MY
Sbjct: 327 DDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY----------- 374
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
AK G + A ++F+ + +DV++WTA++ G NG D
Sbjct: 375 ----------------------AKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYD 412
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+AL+LF M G P+ A++LS S+ L G+Q+H + I+S S+SV N+L+
Sbjct: 413 EALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLV 472
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
TMY K GS+++A +FN + D ++W+ +I+ A++GL
Sbjct: 473 TMYTKCGSLEDANVIFNSM-EIRDLITWTCLIVGYAKNGL-------------------- 511
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+E + YF+ M +V+ I P HYACMIDL+GR+G + + +
Sbjct: 512 ---------------LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLH 556
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
M +EPD W ++L++ + + N++ + AA+ L+ +EP+N+ Y L+N+YSA G+ ++
Sbjct: 557 QMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDE 616
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGF 488
AA +R+LM R + KE G SW+E + +VH F +ED HP+ EIY +D++ IK+ G+
Sbjct: 617 AANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGY 676
Query: 489 IPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKF 548
D LHDL+ E K+ L YHSEKLA+AFG++ P +RI+KNLR+C DCH+A+K
Sbjct: 677 FADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKL 736
Query: 549 I 549
+
Sbjct: 737 L 737
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 225/510 (44%), Gaps = 126/510 (24%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSM-------------------------- 42
N+++ SGR+D A F +M ERD TWN+M
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 43 -----IAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSY 97
I+GY + G EA LF M Q +KP+++TL S L CT+L + G+QIH +
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEM-QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH 150
Query: 98 IIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDIT 157
I+T FD+ V N L++MYA+ + A + E E + + + +T++L GY+
Sbjct: 151 TIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME-GEKNNVTWTSMLTGYS------ 203
Query: 158 PARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSS 217
QNG A+E FR + +EG + N +T ++L+ +
Sbjct: 204 -------------------------QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA 238
Query: 218 RGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWS 277
++ G Q+H ++S +I V +ALI MYAK +++A+ + + +D VSW+
Sbjct: 239 SVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM-EVDDVVSWN 297
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVL------------SACTHVGLVE 325
SMI+ + GL EA+ +F +M ++ D T +L ++ H +V+
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVK 357
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS- 384
G + + L+ + ++D+Y + G++ A K E M IE DVI+W +L++
Sbjct: 358 TGYATYKLVNNA------------LVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
Query: 385 ---------SCKVYKNVDLAKI------------AAERLLLIE--------------PDN 409
+ K++ N+ + I A+ L L+E P +
Sbjct: 405 NTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSS 464
Query: 410 SGAYSALANVYSACGKWEDAAKIRKLMNDR 439
++L +Y+ CG EDA I M R
Sbjct: 465 LSVNNSLVTMYTKCGSLEDANVIFNSMEIR 494
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 157/298 (52%), Gaps = 11/298 (3%)
Query: 90 LGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDG 149
G IHSY RT+ N L+ +K+G V+ AR++ ++ + + D + ++
Sbjct: 16 FGSCIHSYADRTKLH-----SNLLLGDLSKSGRVDEARQMFDK--MPERDEFTWNTMIVA 68
Query: 150 YAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTL 209
Y+ ++ A ++F S ++ ++W A+I GY ++G +A LF M +G +PN +TL
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
++L + + L G+QIH I++ DL ++V N L+ MYA+ I A+ +F +
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG-R 328
+ V+W+SM+ +Q+G +AIE F + G + + T+ VL+AC V G +
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 329 SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
+ ++ S K + + +ID+Y + ++ A +E M ++ DV++W S++ C
Sbjct: 249 VHCCIVKSGFKTNIYVQ--SALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGC 303
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 328 bits (840), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 275/492 (55%), Gaps = 45/492 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+ ++ G ++ A F Q+ D +WN +IAG +G+ EA+ +FS M + S P
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM-RSSGFIP 369
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D +L S L A T ++ G QIHSYII+ F V N+L++MY
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS--------- 420
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR-DVVAWTAMIVGYVQNGLNDD 189
D+ +F+ RN D V+W ++ +Q+ +
Sbjct: 421 ------------------------DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
L LF+ M P+ T+ +L +SL G Q+H ++++ + N LI
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLID 516
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MYAK GS+ A+++F+ + N D VSWS++I+ AQ G GEEA+ LF++M + GIEP+H+
Sbjct: 517 MYAKCGSLGQARRIFDSM-DNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T+VGVL+AC+HVGLVE+G + M + H I PT H +C++DL RAG L EA +FI+
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
M +EPDV+ W +LLS+CK NV LA+ AAE +L I+P NS A+ L +++++ G WE+A
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEI------ 483
A +R M VKK G SW+EI++++HIF AED HP++D+IY ++ IW ++
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECNP 755
Query: 484 ---KKLGFIPDT 492
K+L FI +T
Sbjct: 756 QHKKRLQFIHET 767
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 181/375 (48%), Gaps = 35/375 (9%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I++++ ++ A F + +D+++W+S+IAG++Q GF+ EAL ML
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P+++ S+L AC++L + G QIH I++E + +L MYA+ G + ARR
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR 326
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V FD + D +W +I G NG D
Sbjct: 327 V---------------------------------FDQIERPDTASWNVIIAGLANNGYAD 353
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+A+ +F M G P++ +L ++L ++ +L+ G QIH+ I+ ++V N+L+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
TMY + +F N D+VSW++++ A QH E + LF+ ML EPDH
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
IT +L C + ++ G S + + + P +ID+Y + G L +A + +
Sbjct: 474 ITMGNLLRGCVEISSLKLG-SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD 532
Query: 369 NMPIEPDVIAWGSLL 383
+M DV++W +L+
Sbjct: 533 SMD-NRDVVSWSTLI 546
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 199/412 (48%), Gaps = 55/412 (13%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++S++ G + A F M ER++V++ S+I GY+Q+G EA+ L+ MLQ+ L
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED-L 164
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD+F S + AC + ++ LGKQ+H+ +I+ E QNALI+MY + + A R
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V + DL ++W+++I G+ Q G
Sbjct: 225 VFYGIPMKDL---------------------------------ISWSSIIAGFSQLGFEF 251
Query: 189 DALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+AL + M G PN + + L S ++G QIH I+S + G +L
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
MYA+ G +++A++VF+ I DT SW+ +I LA +G +EA+ +F +M + G PD
Sbjct: 312 CDMYARCGFLNSARRVFDQI-ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD 370
Query: 308 HITYVGVLSACTHVGLVEQG---RSY---FNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
I+ +L A T + QG SY + +A + L+ Y DLY
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC------ 424
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKN-VDLAKIAAERLLLI---EPDN 409
F E+ D ++W ++L++C ++ V++ ++ +L+L+ EPD+
Sbjct: 425 -CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF--KLMLVSECEPDH 473
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 45/350 (12%)
Query: 40 NSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYII 99
N I + F +EALE F ++SS K T S + AC++ ++ G++IH +I+
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 100 RTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPA 159
+ + N ++SMY K G + A
Sbjct: 95 NSNCKYDTILNNHILSMYGKC---------------------------------GSLRDA 121
Query: 160 RQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRG 219
R++FD + R++V++T++I GY QNG +A+ L+ M +E P+ F +++ +
Sbjct: 122 REVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASS 181
Query: 220 ASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSM 279
+ + GKQ+HA I+ + NALI MY + + +A +VF I D +SWSS+
Sbjct: 182 SDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM-KDLISWSSI 240
Query: 280 IIALAQHGLGEEAIELFEKMLALGI-EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVH 338
I +Q G EA+ ++ML+ G+ P+ + L AC+ + + G L
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC---- 296
Query: 339 KIEPTLSHYA---C-MIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
I+ L+ A C + D+Y R G L A + + + PD +W +++
Sbjct: 297 -IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIA 344
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 94/173 (54%), Gaps = 5/173 (2%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ G + A F M RD+V+W+++I GY Q GF +EAL LF M + + +
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM-KSAGI 570
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVA 126
+P+ T L+AC+++ + G ++++ ++TE IS ++ ++ + A+ G + A
Sbjct: 571 EPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQTEHGISPTKEHCSCVVDLLARAGRLNEA 629
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIV 179
R +++ ++ + D + + LL G++ A++ +++ D TA ++
Sbjct: 630 ERFIDEMKL-EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVL 681
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 282/483 (58%), Gaps = 33/483 (6%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS-ERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
IT N MIS + + G + A F + +D+++WNSMIAG+++H + A ELF M
Sbjct: 183 ITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM- 241
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
Q ++ D +T LSAC+ E+ GK +H +I+ + + NALISMY
Sbjct: 242 QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY------ 295
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
I F G + A +F+SL+++D+++W ++I G+ Q
Sbjct: 296 -----------------IQFPT--------GTMEDALSLFESLKSKDLISWNSIITGFAQ 330
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
GL++DA++ F + + + + +A+L S A+L G+QIHA A +S + V
Sbjct: 331 KGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFV 390
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
++LI MY+K G I++A+K F I + TV+W++MI+ AQHGLG+ +++LF +M
Sbjct: 391 ISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQN 450
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
++ DH+T+ +L+AC+H GL+++G NLM V+KI+P + HYA +DL GRAGL+ +A
Sbjct: 451 VKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKA 510
Query: 364 FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
+ IE+MP+ PD + + L C+ +++A A LL IEP++ Y +L+++YS
Sbjct: 511 KELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDL 570
Query: 424 GKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEI 483
KWE+ A ++K+M +RGVKK G SW+EI+N+V F AED +P +IY M+ + +E+
Sbjct: 571 KKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 630
Query: 484 KKL 486
+ L
Sbjct: 631 QWL 633
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 202/446 (45%), Gaps = 81/446 (18%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F +M +RD V+WN+MI+GY G ++A LF+ M + S D ++ + L +++
Sbjct: 3 FDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKR 61
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+LG+Q+H +I+ GG E + ++L+
Sbjct: 62 FDLGEQVHGLVIK--------------------GGYEC-------------NVYVGSSLV 88
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM-TKEGPRPNS 206
D YAK + A + F + + V+W A+I G+VQ A L M K ++
Sbjct: 89 DMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDA 148
Query: 207 FTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNL 266
T A +L++ N KQ+HA ++ I++ NA+I+ YA GS+ +A++VF+
Sbjct: 149 GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDG 208
Query: 267 ICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHV----- 321
+ + D +SW+SMI ++H L E A ELF +M +E D TY G+LSAC+
Sbjct: 209 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIF 268
Query: 322 -----GLV-----EQGRSYFNLMASVHKIEPT-----------------LSHYACMIDLY 354
G+V EQ S N + S++ PT L + +I +
Sbjct: 269 GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGF 328
Query: 355 GRAGLLQEAFKF---IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSG 411
+ GL ++A KF + + I+ D A+ +LL SC DLA + + + SG
Sbjct: 329 AQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS-----DLATLQLGQQIHALATKSG 383
Query: 412 ------AYSALANVYSACGKWEDAAK 431
S+L +YS CG E A K
Sbjct: 384 FVSNEFVISSLIVMYSKCGIIESARK 409
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 178/376 (47%), Gaps = 38/376 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ R++ A F+++SE + V+WN++IAG+ Q K A L M +++
Sbjct: 87 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 146
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D T A L+ + NL KQ+H+ +++ + NA+IS YA G V A+RV
Sbjct: 147 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV- 205
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL-RNRDVVAWTAMIVGYVQNGLNDD 189
FD L ++D+++W +MI G+ ++ L +
Sbjct: 206 --------------------------------FDGLGGSKDLISWNSMIAGFSKHELKES 233
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
A ELF M + + +T +LS S GK +H I+ + S NALI+
Sbjct: 234 AFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALIS 293
Query: 250 MYAK--AGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
MY + G++++A +F + + D +SW+S+I AQ GL E+A++ F + + I+ D
Sbjct: 294 MYIQFPTGTMEDALSLFESL-KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVD 352
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
+ +L +C+ + ++ G+ L + + +I +Y + G+++ A K
Sbjct: 353 DYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFV-ISSLIVMYSKCGIIESARKCF 411
Query: 368 ENMPIEPDVIAWGSLL 383
+ + + +AW +++
Sbjct: 412 QQISSKHSTVAWNAMI 427
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 147/274 (53%), Gaps = 17/274 (6%)
Query: 2 LRSITS-WNIMISLHMN--SGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALEL 58
L +TS N +IS+++ +G ++ AL+ F+ + +D+++WNS+I G+ Q G ++A++
Sbjct: 281 LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKF 340
Query: 59 FSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
F S L+ S +K D + ++ L +C++L + LG+QIH+ ++ F + V ++LI MY+
Sbjct: 341 F-SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYS 399
Query: 119 KTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VAW 174
K G +E AR+ +Q S +A+ A++ GYA+ G + +F + N++V V +
Sbjct: 400 KCGIIESARKCFQQIS-SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTF 458
Query: 175 TAMIVGYVQNGLNDDALELFRAMT---KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS 231
TA++ GL + LEL M K PR + AA + + R +N K++ S
Sbjct: 459 TAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHY--AAAVDLLGRAGLVNKAKELIES 516
Query: 232 AIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
+ + + V + + G I+ A +V N
Sbjct: 517 MPLNPDPM---VLKTFLGVCRACGEIEMATQVAN 547
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 162 IFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGAS 221
+FD + RD V+W MI GY G +DA LF M + G + ++ + +L +
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 222 LNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMII 281
+ G+Q+H I+ + ++ VG++L+ MYAK +++A + F I N +VSW+++I
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPN-SVSWNALIA 120
Query: 282 ALAQHGLGEEAIELFEKM-LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK- 339
Q + A L M + + D T+ +L+ + + NL+ VH
Sbjct: 121 GFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT-------LLDDPMFCNLLKQVHAK 173
Query: 340 -----IEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
++ ++ MI Y G + +A + + + D+I+W S+++
Sbjct: 174 VLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 223
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 324 bits (831), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 285/497 (57%), Gaps = 37/497 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ G + + F M ERD+V+WN+MI+ + Q+G D E L L M Q
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM-QKQGF 415
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
K D T+ + LSA +NL N +GKQ H+++IR G + + LI MY+K+G + ++++
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQK 474
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ E S GYA+ RD W +MI GY QNG +
Sbjct: 475 LFEGS---------------GYAE----------------RDQATWNSMISGYTQNGHTE 503
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+FR M ++ RPN+ T+A++L S+ S++ GKQ+H +IR D ++ V +AL+
Sbjct: 504 KTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALV 563
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MY+KAG+I A+ +F+ N +V++++MI+ QHG+GE AI LF M GI+PD
Sbjct: 564 DMYSKAGAIKYAEDMFSQTKERN-SVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
IT+V VLSAC++ GL+++G F M V+ I+P+ HY C+ D+ GR G + EA++F++
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 369 NMPIEPDVIA-WGSLLSSCKVYKNVDLAKIAAERLLLIEPDN--SGAYSALANVYSACGK 425
+ E ++ WGSLL SCK++ ++LA+ +ERL + SG L+N+Y+ K
Sbjct: 683 GLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQK 742
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKK 485
W+ K+R+ M ++G+KKE G S +EI V+ F + D HP EIY ++D + ++++
Sbjct: 743 WKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRG 802
Query: 486 LGFIPDTDSVLHDLEIE 502
F+ +V LE++
Sbjct: 803 DSFLTTLPTVTPSLELD 819
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 191/445 (42%), Gaps = 82/445 (18%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL-KPDKFTLAS 77
G LA F + + V WN++I G+ + EAL +S M + + D +T +S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 78 TLSACTNLENMNLGKQIHSYIIRT--------------------------EFDISGAV-- 109
TL AC +N+ GK +H ++IR E+D+ V
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 110 ---------QNALISMYAKTG-----------------------------GVEVARRVVE 131
N LIS Y KTG V ++R + +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 132 QSEISDL----------DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+ L D ++ + YA+LGDI +R++FDS R++ W MI Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 182 VQNGLNDDALELF-RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
VQN +++ELF A+ + + T S S + G+Q H ++ +L
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
I + N+L+ MY++ GS+ + VF L D VSW++MI A Q+GL +E + L +M
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVF-LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
G + D+IT +LSA +++ E G+ + ++ Y +ID+Y ++GL+
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLI 469
Query: 361 QEAFKFIENMPI-EPDVIAWGSLLS 384
+ + K E E D W S++S
Sbjct: 470 RISQKLFEGSGYAERDQATWNSMIS 494
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 322 bits (825), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 290/503 (57%), Gaps = 29/503 (5%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N I ++ + A F +M RD V+WN++IA + Q+G E L LF SML+ S +
Sbjct: 379 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRI 437
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+PD+FT S L ACT ++ G +IHS I+++ + +V +LI MY+K G +E A +
Sbjct: 438 EPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 496
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VAWTAMIVGYVQN 184
+ + + + +++ + + + N+ + V+W ++I GYV
Sbjct: 497 IHSR-----------------FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 539
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
++DA LF M + G P+ FT A +L + AS GKQIHA I+ + +
Sbjct: 540 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 599
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+ L+ MY+K G + +++ +F D V+W++MI A HG GEEAI+LFE+M+ I
Sbjct: 600 STLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI 658
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
+P+H+T++ +L AC H+GL+++G YF +M + ++P L HY+ M+D+ G++G ++ A
Sbjct: 659 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 718
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYK-NVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
+ I MP E D + W +LL C +++ NV++A+ A LL ++P +S AY+ L+NVY+
Sbjct: 719 ELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADA 778
Query: 424 GKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEI 483
G WE + +R+ M +KKE G SW+E+++E+H+F D HP+ +EIY+ + I+ E+
Sbjct: 779 GMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 838
Query: 484 KKLGFIPDTDSVLHDLEIEVKDK 506
K D S + +E+E +D+
Sbjct: 839 KPF----DDSSFVRGVEVEEEDQ 857
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 155/556 (27%), Positives = 244/556 (43%), Gaps = 125/556 (22%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
LR + SWN MI+ + S + A + F M RD+V+WNSM++GY Q+G +++E+F
Sbjct: 69 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 128
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFD----------------- 104
M ++ ++ D T A L C+ LE+ +LG QIH ++R D
Sbjct: 129 MGREG-IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 187
Query: 105 -----------------------ISGAVQNALISMYAK--------TGGVE------VAR 127
I+G VQN L+S+ K GV V R
Sbjct: 188 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 247
Query: 128 RVVEQSEI------------SDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVA 173
SE+ SD D I TA LD YAK ++ A+ +FD+ N + +
Sbjct: 248 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 307
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ AMI GY Q AL LF + G + +L+ + + L+ G QI+ AI
Sbjct: 308 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 367
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAI 293
+S L + V NA I MY K ++ A +VF+ + D VSW+++I A Q+G G E +
Sbjct: 368 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQNGKGYETL 426
Query: 294 ELFEKMLALGIEPDHITYVGVLSACT----------HVGLVEQGRSYFNLMASVHKIEPT 343
LF ML IEPD T+ +L ACT H +V+ G MAS + +
Sbjct: 427 FLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSG------MASNSSVGCS 480
Query: 344 LSHYACMIDLYGRAGLLQEAFKF-------------------IENMPIEPDVIAWGSLLS 384
L ID+Y + G+++EA K + N ++ ++W S++S
Sbjct: 481 L------IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIIS 534
Query: 385 SCKVYKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
+ + + A++ R++ I PD A V C A + K ++ + +K
Sbjct: 535 GYVMKEQSEDAQMLFTRMMEMGITPDK----FTYATVLDTCANLASAG-LGKQIHAQVIK 589
Query: 443 KEQGSSWLEIQNEVHI 458
K E+Q++V+I
Sbjct: 590 K-------ELQSDVYI 598
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 216/502 (43%), Gaps = 127/502 (25%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYN--------------------- 47
N ++ ++ NS A F +M RD+V+WN MI GY+
Sbjct: 45 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 104
Query: 48 ----------QHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSY 97
Q+G +++E+F M ++ ++ D T A L C+ LE+ +LG QIH
Sbjct: 105 SWNSMLSGYLQNGESLKSIEVFVDMGRE-GIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 163
Query: 98 IIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDIT 157
++R D +AL+ MYAK +R VE
Sbjct: 164 VVRVGCDTDVVAASALLDMYAK------GKRFVE-------------------------- 191
Query: 158 PARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSS 217
+ ++F + ++ V+W+A+I G VQN L AL+ F+ M K + A++L +
Sbjct: 192 -SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Query: 218 RGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWS 277
+ L G Q+HA A++S V A + MYAK ++ +AQ +F+ N + S++
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD-NSENLNRQSYN 309
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASV 337
+MI +Q G +A+ LF ++++ G+ D I+ GV AC V + +G + L
Sbjct: 310 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL---- 365
Query: 338 HKIEPTLSHYACM----IDLYGRAGLLQEAFKFIENM----------------------- 370
I+ +LS C+ ID+YG+ L EAF+ + M
Sbjct: 366 -AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 424
Query: 371 -----------PIEPDVIAWGSLLSSC---------KVYKNVDLAKIAAERLLLIEPDNS 410
IEPD +GS+L +C +++ ++ + +A+ NS
Sbjct: 425 TLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMAS---------NS 475
Query: 411 GAYSALANVYSACGKWEDAAKI 432
+L ++YS CG E+A KI
Sbjct: 476 SVGCSLIDMYSKCGMIEEAEKI 497
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 3/238 (1%)
Query: 82 CTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAI 141
C + LGKQ H+++I + F + V N L+ +Y + A V ++ + D+ +
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDV--V 73
Query: 142 AFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEG 201
++ +++GY+K D+ A F+ + RDVV+W +M+ GY+QNG + ++E+F M +EG
Sbjct: 74 SWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 133
Query: 202 PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQ 261
+ T A +L V S + G QIH +R D + +AL+ MYAK +
Sbjct: 134 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 262 KVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT 319
+VF I N +VSWS++I Q+ L A++ F++M + Y VL +C
Sbjct: 194 RVFQGIPEKN-SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 265/452 (58%), Gaps = 3/452 (0%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
+D A F Q+S ++ +NS+I Y + + + ++ +L+ S PD+FT
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
+C +L + LGKQ+H ++ + +NALI MY K + A +V + E+ + D
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFD--EMYERDV 175
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
I++ +LL GYA+LG + A+ +F + ++ +V+WTAMI GY G +A++ FR M
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
G P+ +L ++L ++ SL GK IH A R V NALI MY+K G I A
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
++F + D +SWS+MI A HG AIE F +M ++P+ IT++G+LSAC+H
Sbjct: 296 IQLFGQM-EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH 354
Query: 321 VGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWG 380
VG+ ++G YF++M ++IEP + HY C+ID+ RAG L+ A + + MP++PD WG
Sbjct: 355 VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWG 414
Query: 381 SLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
SLLSSC+ N+D+A +A + L+ +EP++ G Y LAN+Y+ GKWED +++RK++ +
Sbjct: 415 SLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNEN 474
Query: 441 VKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEI 472
+KK G S +E+ N V F + D+ P EI
Sbjct: 475 MKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 43/309 (13%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + SWN ++S + G++ A F M ++ IV+W +MI+GY G EA++ F M
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
Q + ++PD+ +L S L +C L ++ LGK IH Y R F V NALI MY+K G
Sbjct: 233 -QLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ A ++ Q E D+ I+++ ++ GYA G+
Sbjct: 292 ISQAIQLFGQMEGKDV--ISWSTMISGYAYHGNA-------------------------- 323
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
A+E F M + +PN T +LS S G + R+D I
Sbjct: 324 -----HGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMM---RQDYQIE 375
Query: 243 VG----NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
LI + A+AG ++ A ++ + D+ W S++ + G + A+ +
Sbjct: 376 PKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDH 435
Query: 299 MLALGIEPD 307
++ L EP+
Sbjct: 436 LVEL--EPE 442
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 288/494 (58%), Gaps = 37/494 (7%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F +M ++D+++W ++IAGY Q+ EALELF + + ++ D+ L S L A + L++
Sbjct: 407 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKS 465
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
M + K+IH +I+R LD + L+
Sbjct: 466 MLIVKEIHCHILRKGL----------------------------------LDTVIQNELV 491
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
D Y K ++ A ++F+S++ +DVV+WT+MI NG +A+ELFR M + G +S
Sbjct: 492 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 551
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
L +LS ++ ++LN G++IH +R L S+ A++ MYA G + +A+ VF+ I
Sbjct: 552 ALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 611
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+ ++SMI A HG G+ A+ELF+KM + PDHI+++ +L AC+H GL+++G
Sbjct: 612 -ERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 670
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCK 387
R + +M +++EP HY C++D+ GRA + EAF+F++ M EP W +LL++C+
Sbjct: 671 RGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACR 730
Query: 388 VYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGS 447
+ ++ +IAA+RLL +EP N G ++NV++ G+W D K+R M G++K G
Sbjct: 731 SHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGC 790
Query: 448 SWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEI-KKLGFIPDTDSVLHDLEIEVKDK 506
SW+E+ +VH F A D HP+ EIY+ + ++ ++ +++G++ DT VLH+++ K +
Sbjct: 791 SWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQ 850
Query: 507 LLRYHSEKLAIAFG 520
+L HSE++AIA+G
Sbjct: 851 MLHGHSERIAIAYG 864
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 187/396 (47%), Gaps = 62/396 (15%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSER-DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
N ++S++ + + A F E+ D V WNS+++ Y+ G E LELF M +
Sbjct: 184 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM-HMTG 242
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVA 126
P+ +T+ S L+AC LGK+IH+ ++++ S V NALI+MY + G
Sbjct: 243 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG----- 297
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
+ A +I + N DVV W ++I GYVQN +
Sbjct: 298 ----------------------------KMPQAERILRQMNNADVVTWNSLIKGYVQNLM 329
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+ALE F M G + + ++ ++++ S R ++L G ++HA I+ D ++ VGN
Sbjct: 330 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 389
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
LI MY+K + F L + D +SW+++I AQ+ EA+ELF + +E
Sbjct: 390 LIDMYSKCNLTCYMGRAF-LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 448
Query: 307 DHITYVGVLSACT-----------HVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYG 355
D + +L A + H ++ +G L+ +V + E ++D+YG
Sbjct: 449 DEMILGSILRASSVLKSMLIVKEIHCHILRKG-----LLDTVIQNE--------LVDVYG 495
Query: 356 RAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKN 391
+ + A + E++ + DV++W S++SS + N
Sbjct: 496 KCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGN 530
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 18/255 (7%)
Query: 136 SDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFR 195
S ++A A+ L G + ++FD + +R AW MI YV NG AL L+
Sbjct: 78 SPVEAFAYVLELCGKRR---AVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYW 134
Query: 196 AMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAG 255
M EG + A+L ++ + G ++H+ ++ + + NAL++MYAK
Sbjct: 135 NMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 194
Query: 256 SIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVL 315
+ A+++F+ D V W+S++ + + G E +ELF +M G P+ T V L
Sbjct: 195 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 254
Query: 316 SACTHVGLVEQGRSYFNLMASVH-KIEPTLSH----YAC--MIDLYGRAGLLQEAFKFIE 368
+AC G SY L +H + + +H Y C +I +Y R G + +A + +
Sbjct: 255 TAC-------DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILR 307
Query: 369 NMPIEPDVIAWGSLL 383
M DV+ W SL+
Sbjct: 308 QMN-NADVVTWNSLI 321
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ + A F+ + +D+V+W SMI+ +G + EA+ELF M++ + L
Sbjct: 488 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE-TGL 546
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
D L LSA +L +N G++IH Y++R F + G++ A++ MYA G ++ A+
Sbjct: 547 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 606
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VAWTAMIVGYVQN 184
V ++ E L + +T++++ Y G A ++FD +R+ +V +++ A++
Sbjct: 607 VFDRIERKGL--LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHA 664
Query: 185 GLNDDALELFRAMTKE 200
GL D+ + M E
Sbjct: 665 GLLDEGRGFLKIMEHE 680
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 285/500 (57%), Gaps = 30/500 (6%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
++ + S + M+ + GRI A + F +M+ER+++TW +MI GY + GF ++ LF
Sbjct: 205 VKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLR 264
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M Q+ +K + TLA AC + G QIH + R + + N+L+SMY+K G
Sbjct: 265 MRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
Query: 122 GVEVARRV-------------------VEQSEISDL----------DAIAFTALLDGYAK 152
+ A+ V V++ +IS+ D +++T ++ G++
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSG 384
Query: 153 LGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAM 212
G+I+ ++F + +D + WTAMI +V NG ++AL F M ++ PNS+T +++
Sbjct: 385 KGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 213 LSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNND 272
LS ++ A L G QIH ++ +SV N+L++MY K G+ ++A K+F+ I N
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN- 503
Query: 273 TVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFN 332
VS+++MI + +G G++A++LF + + G EP+ +T++ +LSAC HVG V+ G YF
Sbjct: 504 IVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFK 563
Query: 333 LMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNV 392
M S + IEP HYACM+DL GR+GLL +A I MP +P WGSLLS+ K + V
Sbjct: 564 SMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRV 623
Query: 393 DLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEI 452
DLA++AA++L+ +EPD++ Y L+ +YS GK D +I + + +KK+ GSSW+ +
Sbjct: 624 DLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIIL 683
Query: 453 QNEVHIFGAEDSLHPQKDEI 472
+ EVH F A D +EI
Sbjct: 684 KGEVHNFLAGDESQLNLEEI 703
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 210/437 (48%), Gaps = 27/437 (6%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFD-KEALELFSS 61
RSI SW MIS + +G++ A F +M R ++N+MI ++ D +A ELF
Sbjct: 79 RSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCD 138
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAV-QNALISMYAKT 120
+ + +++ + A+ ++ + + +++ T +V N L+S Y +
Sbjct: 139 IPEKNAV-----SYATMITGFVRAGRFDEAEFLYA---ETPVKFRDSVASNVLLSGYLRA 190
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G A RV + + ++ ++ ++++ GY K+G I AR +FD + R+V+ WTAMI G
Sbjct: 191 GKWNEAVRVFQGMAVKEV--VSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDG 248
Query: 181 YVQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
Y + G +D LF M +EG + NS TLA M G QIH R +
Sbjct: 249 YFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEF 308
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
+ +GN+L++MY+K G + A+ VF ++ N D+VSW+S+I L Q EA ELFEKM
Sbjct: 309 DLFLGNSLMSMYSKLGYMGEAKAVFGVM-KNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
D +++ ++ + G + + F +M I + MI + G
Sbjct: 368 PG----KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGY 418
Query: 360 LQEAFKFIENM---PIEPDVIAWGSLLSSCKVYKN-VDLAKIAAERLLLIEPDNSGAYSA 415
+EA + M + P+ + S+LS+ + ++ +I + + ++ ++
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS 478
Query: 416 LANVYSACGKWEDAAKI 432
L ++Y CG DA KI
Sbjct: 479 LVSMYCKCGNTNDAYKI 495
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 318 bits (814), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 280/476 (58%), Gaps = 6/476 (1%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++T+ ++ + ++ A F +++ ++ WN++I G+++ F + A+ +F ML
Sbjct: 57 TVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDML 116
Query: 64 QDS-SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
S S+KP + T S A L G+Q+H +I+ + ++N ++ MY G
Sbjct: 117 CSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGC 176
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ A R+ + D +A+ +++ G+AK G I A+ +FD + R+ V+W +MI G+V
Sbjct: 177 LIEAWRIFLG--MIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFV 234
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+NG DAL++FR M ++ +P+ FT+ ++L+ + + G+ IH +R+R +L+
Sbjct: 235 RNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSI 294
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVS-WSSMIIALAQHGLGEEAIELFEKMLA 301
V ALI MY K G I+ VF C +S W+SMI+ LA +G E A++LF ++
Sbjct: 295 VVTALIDMYCKCGCIEEGLNVFE--CAPKKQLSCWNSMILGLANNGFEERAMDLFSELER 352
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
G+EPD ++++GVL+AC H G V + +F LM + IEP++ HY M+++ G AGLL+
Sbjct: 353 SGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLE 412
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYS 421
EA I+NMP+E D + W SLLS+C+ NV++AK AA+ L ++PD + Y L+N Y+
Sbjct: 413 EAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYA 472
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMD 477
+ G +E+A + R LM +R ++KE G S +E+ EVH F + HP+ EIY ++D
Sbjct: 473 SYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD 528
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 259/430 (60%), Gaps = 8/430 (1%)
Query: 55 ALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALI 114
A F M+ S +P+ F L + L + +H+++ ++ F + VQ AL+
Sbjct: 109 AFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALL 168
Query: 115 SMYAKT-GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVA 173
YA + + +AR++ + E+S+ + +++TA+L GYA+ GDI+ A +F+ + RDV +
Sbjct: 169 HSYASSVSHITLARQLFD--EMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPS 226
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
W A++ QNGL +A+ LFR M E RPN T+ +LS ++ +L K IHA A
Sbjct: 227 WNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA 286
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEA 292
R + V N+L+ +Y K G+++ A VF + + T +W+SMI A HG EEA
Sbjct: 287 YRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLT-AWNSMINCFALHGRSEEA 345
Query: 293 IELFEKMLALGI---EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
I +FE+M+ L I +PDHIT++G+L+ACTH GLV +GR YF+LM + IEP + HY C
Sbjct: 346 IAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGC 405
Query: 350 MIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDN 409
+IDL GRAG EA + + M ++ D WGSLL++CK++ ++DLA++A + L+ + P+N
Sbjct: 406 LIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNN 465
Query: 410 SGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQK 469
G + +AN+Y G WE+A + RK++ + K G S +EI NEVH F + D HP+
Sbjct: 466 GGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPET 525
Query: 470 DEIYKMMDKI 479
+EIY ++D +
Sbjct: 526 EEIYMILDSL 535
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 149/319 (46%), Gaps = 41/319 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ SW M+S + SG I A+A F+ M ERD+ +WN+++A Q+G EA+ LF M
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ + S++P++ T+ LSAC + L K IH++ R + V N+L+ +Y K G
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E A +F + + AW +MI +
Sbjct: 311 LE---------------------------------EASSVFKMASKKSLTAWNSMINCFA 337
Query: 183 QNGLNDDALELFRAMTK---EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
+G +++A+ +F M K +P+ T +L+ + G ++ G+ + + +R +
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG-YFDLMTNRFGI 396
Query: 240 SISVGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
+ + LI + +AG D A +V + + D W S++ A HG + A +
Sbjct: 397 EPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVK 456
Query: 298 KMLALGIEPDHITYVGVLS 316
++AL P++ YV +++
Sbjct: 457 NLVALN--PNNGGYVAMMA 473
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/496 (33%), Positives = 287/496 (57%), Gaps = 39/496 (7%)
Query: 9 NIMISLHMN-SGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML-QDS 66
N M++++ S ++ A F+ + ++ VTW ++I G+ G L+++ ML +++
Sbjct: 150 NAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA 209
Query: 67 SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
+ P T+A SA +++++ GKQIH+ +I+ F
Sbjct: 210 EVTPYCITIAVRASA--SIDSVTTGKQIHASVIKRGF----------------------- 244
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
QS + +++I LD Y + G ++ A+ F + ++D++ W +I ++
Sbjct: 245 -----QSNLPVMNSI-----LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI-SELERSD 293
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+ +AL +F+ +G PN +T ++++ + A+LN G+Q+H R + ++ + NA
Sbjct: 294 SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANA 353
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
LI MYAK G+I ++Q+VF I + VSW+SM+I HG G EA+ELF+KM++ GI P
Sbjct: 354 LIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRP 413
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
D I ++ VLSAC H GLVE+G YFN+M S + I P Y C++DL GRAG + EA++
Sbjct: 414 DRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 473
Query: 367 IENMPIEPDVIAWGSLLSSCKVYK-NVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
+E MP +PD WG++L +CK +K N ++++AA +++ ++P G Y L+ +Y+A GK
Sbjct: 474 VERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGK 533
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKK 485
W D A++RK+M G KKE G SW+ ++N+V F D + P +Y ++ + EE ++
Sbjct: 534 WVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETRE 593
Query: 486 LGFIPDTDSVLHDLEI 501
G++P+ DS+++D E+
Sbjct: 594 AGYVPELDSLVNDQEV 609
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 183/379 (48%), Gaps = 37/379 (9%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
I + N+++S + G ++ A + F +M +RD+V W +MI GY ++ A E F M++
Sbjct: 46 ILATNLIVS-YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
+ P++FTL+S L +C N++ + G +H +++ + S V NA+++MYA T V
Sbjct: 105 QGT-SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA-TCSVT 162
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
+ + +I + + +T L+ G+ LGD
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGD----------------------------- 193
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
G+ L++++ M E + + + S+ S+ GKQIHAS I+ ++ V
Sbjct: 194 GIG--GLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVM 251
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
N+++ +Y + G + A+ F+ + + D ++W+++I L + EA+ +F++ + G
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEM-EDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGF 309
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
P+ T+ +++AC ++ + G+ + + +ID+Y + G + ++
Sbjct: 310 VPNCYTFTSLVAACANIAALNCGQQLHGRIFR-RGFNKNVELANALIDMYAKCGNIPDSQ 368
Query: 365 KFIENMPIEPDVIAWGSLL 383
+ + ++++W S++
Sbjct: 369 RVFGEIVDRRNLVSWTSMM 387
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 8/269 (2%)
Query: 119 KTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMI 178
+ GVE ++ I T L+ Y + G + AR +FD + +RDVVAWTAMI
Sbjct: 24 RNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMI 83
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRED 238
GY + N A E F M K+G PN FTL+++L L +G +H ++ +
Sbjct: 84 TGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGME 143
Query: 239 LSISVGNALITMYAKAG-SIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
S+ V NA++ MYA +++ A +F I ND V+W+++I G G +++++
Sbjct: 144 GSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKND-VTWTTLITGFTHLGDGIGGLKMYK 202
Query: 298 KMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK--IEPTLSHYACMIDLYG 355
+ML E + A + V G+ + ASV K + L ++DLY
Sbjct: 203 QMLLENAEVTPYCITIAVRASASIDSVTTGK---QIHASVIKRGFQSNLPVMNSILDLYC 259
Query: 356 RAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
R G L EA + M + D+I W +L+S
Sbjct: 260 RCGYLSEAKHYFHEME-DKDLITWNTLIS 287
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/561 (34%), Positives = 311/561 (55%), Gaps = 42/561 (7%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F+ + +++VTWNSMIA + K+A+ +F M D F A+ L+ C++L
Sbjct: 218 FEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV----GFDRATLLNICSSL-- 271
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+ S V N + + + V +V Q+E++ TAL+
Sbjct: 272 ---------------YKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVA-------TALI 309
Query: 148 DGYAK-LGDITPARQIFDSLRN-RDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
Y++ L D T ++F + + RD+VAW +I + + A+ LF + +E P+
Sbjct: 310 KVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPD 368
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
+T +++L + + H IHA I+ + N+LI YAK GS+D +VF+
Sbjct: 369 WYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFD 428
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
+ + D VSW+SM+ A + HG + + +F+KM I PD T++ +LSAC+H G VE
Sbjct: 429 DM-DSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVE 484
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
+G F M + P L+HYAC+ID+ RA EA + I+ MP++PD + W +LL S
Sbjct: 485 EGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGS 544
Query: 386 CKVYKNVDLAKIAAERLL-LIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
C+ + N L K+AA++L L+EP NS +Y ++N+Y+A G + +A K M V+KE
Sbjct: 545 CRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKE 604
Query: 445 QGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVK 504
SW EI N+VH F + P K+ +Y+ + ++ +K++G++P+ S D+E E +
Sbjct: 605 PDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQ 664
Query: 505 DKL-LRYHSEKLAIAFGIISTPENT-----TLRIMKNLRICNDCHTAIKFISKLMGREII 558
++ L +HSEKLA+AF ++ +++ ++IMKN RIC DCH +K SKL+G+EI+
Sbjct: 665 EEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEIL 724
Query: 559 VRDVTRFHHFKDGFCSCRDYW 579
+RD RFHHFKD CSC DYW
Sbjct: 725 MRDSNRFHHFKDSSCSCNDYW 745
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 206/441 (46%), Gaps = 54/441 (12%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I+++ G I A F M ER++V+W ++I GY Q G ++E LFSSML S
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML--SHC 157
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P++FTL+S L++C GKQ+H ++ S V NA+ISMY +
Sbjct: 158 FPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCH------- 206
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
DG A A +F++++ +++V W +MI + L
Sbjct: 207 -------------------DGAAAY----EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK 243
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGK------QIHASAIRSREDLSIS 242
A+ +F M +G + TL + S + + L + Q+H+ ++S
Sbjct: 244 KAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTE 303
Query: 243 VGNALITMYAKA-GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
V ALI +Y++ + K+F + D V+W+ +I A A + E AI LF ++
Sbjct: 304 VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQ 362
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK---IEPTLSHYACMIDLYGRAG 358
+ PD T+ VL AC GLV R ++ A V K + T+ + + +I Y + G
Sbjct: 363 EKLSPDWYTFSSVLKACA--GLV-TARHALSIHAQVIKGGFLADTVLNNS-LIHAYAKCG 418
Query: 359 LLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALAN 418
L + ++M DV++W S+L + ++ VD + + + + I PD S + AL +
Sbjct: 419 SLDLCMRVFDDMD-SRDVVSWNSMLKAYSLHGQVD-SILPVFQKMDINPD-SATFIALLS 475
Query: 419 VYSACGKWEDAAKIRKLMNDR 439
S G+ E+ +I + M ++
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEK 496
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 37/288 (12%)
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
G+ + ++ + I L++ YAK G+I ARQ+FD++ R+VV+WTA+I GY
Sbjct: 78 GINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGY 137
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
VQ G + LF +M PN FTL+++L+ GKQ+H A++ SI
Sbjct: 138 VQAGNEQEGFCLFSSMLSHC-FPNEFTLSSVLT----SCRYEPGKQVHGLALKLGLHCSI 192
Query: 242 SVGNALITMYAKA---GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
V NA+I+MY + + A VF I + N V+W+SMI A LG++AI +F +
Sbjct: 193 YVANAVISMYGRCHDGAAAYEAWTVFEAIKFKN-LVTWNSMIAAFQCCNLGKKAIGVFMR 251
Query: 299 MLALGIEPDHITYVGVLSA--------------CT---HVGLVEQGRSYFNLMASVHKIE 341
M + G+ D T + + S+ C H V+ G L+
Sbjct: 252 MHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSG-----LVTQTEVAT 306
Query: 342 PTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
+ Y+ M++ Y + +K M D++AW ++++ VY
Sbjct: 307 ALIKVYSEMLEDY------TDCYKLFMEMSHCRDIVAWNGIITAFAVY 348
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I + G +DL + F M RD+V+WNSM+ Y+ HG L +F M +
Sbjct: 408 NSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM----DI 463
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN-----ALISMYAKTGGV 123
PD T + LSAC++ + G + I R+ F+ + +I M ++
Sbjct: 464 NPDSATFIALLSACSHAGRVEEGLR----IFRSMFEKPETLPQLNHYACVIDMLSRAERF 519
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR 167
A V++Q + D DA+ + ALL K G+ + D L+
Sbjct: 520 AEAEEVIKQMPM-DPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 271/484 (55%), Gaps = 39/484 (8%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS + +SG D A F ++D+VTW +MI G+ ++G EA+ F M + + +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM-KKTGV 200
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
++ T+ S L A +E++ G+ +H +Y +TG V+
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHG-------------------LYLETGRVKC--- 238
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
D ++L+D Y K A+++FD + +R+VV WTA+I GYVQ+ D
Sbjct: 239 ----------DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD 288
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+ +F M K PN TL+++LS + +L+ G+++H I++ +++ + G LI
Sbjct: 289 KGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLI 348
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+Y K G ++ A VF + N +W++MI A HG +A +LF ML+ + P+
Sbjct: 349 DLYVKCGCLEEAILVFERLHEKN-VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNE 407
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+T++ VLSAC H GLVE+GR F M +EP HYACM+DL+GR GLL+EA IE
Sbjct: 408 VTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIE 467
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
MP+EP + WG+L SC ++K+ +L K AA R++ ++P +SG Y+ LAN+YS W++
Sbjct: 468 RMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDE 527
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHP-QKDEIYKMMDKIWEEIKKLG 487
A++RK M D+ V K G SW+E++ ++ F A D P + D++YK +D + +++
Sbjct: 528 VARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR--- 584
Query: 488 FIPD 491
+PD
Sbjct: 585 -LPD 587
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 25 LAQFQQMSERDIVTWNSMIAGYNQH-GFDKEALELFSSMLQDSSLKPDKFTLASTLSACT 83
L Q Q +S I W+S+I ++ ++ L ++ + + P + T L A
Sbjct: 59 LCQLQTLS---IQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVF 115
Query: 84 NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAF 143
L + N Q H++I++ D V+N+LIS
Sbjct: 116 KLRDSN-PFQFHAHIVKFGLDSDPFVRNSLIS---------------------------- 146
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
GY+ G A ++FD ++DVV WTAMI G+V+NG +A+ F M K G
Sbjct: 147 -----GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRS-REDLSISVGNALITMYAKAGSIDNAQK 262
N T+ ++L + + + G+ +H + + R + +G++L+ MY K D+AQK
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
VF+ + N V+W+++I Q ++ + +FE+ML + P+ T VLSAC HVG
Sbjct: 262 VFDEMPSRN-VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 323 LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
+ +GR M + IE + +IDLY + G L+EA E + E +V W ++
Sbjct: 321 ALHRGRRVHCYMIK-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAM 378
Query: 383 LS 384
++
Sbjct: 379 IN 380
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 9/269 (3%)
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD---ALELFRAMTKEGPRPNSFTLAAMLSV 215
AR++ L+ + W ++I G+ G+ + + +R M + G P+ T +L
Sbjct: 55 ARRLLCQLQTLSIQLWDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 216 SSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVS 275
+ N Q HA ++ D V N+LI+ Y+ +G D A ++F+ + D V+
Sbjct: 114 VFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFD-GAEDKDVVT 171
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA 335
W++MI ++G EA+ F +M G+ + +T V VL A V V GRS L
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 336 SVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
+++ + + ++D+YG+ +A K + MP +V+ W +L++ + D
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAGYVQSRCFDKG 290
Query: 396 KIAAERLLLIEPDNSGAYSALANVYSACG 424
+ E +L + D + L++V SAC
Sbjct: 291 MLVFEEML--KSDVAPNEKTLSSVLSACA 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
T+ +I L++ G ++ A+ F+++ E+++ TW +MI G+ HG+ ++A +LF +ML
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLS- 400
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGV 123
S + P++ T + LSAC + + G+++ ++ F++ + ++ ++ + G +
Sbjct: 401 SHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 124 EVARRVVEQSEISDLD----AIAFTALLDGYAKLGDITPARQI 162
E A+ ++E+ + + A+ + LL +LG +R I
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVI 502
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 293/536 (54%), Gaps = 47/536 (8%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++L+ +GR+ A F +M R+ ++WN MI G++Q + A+++F M Q
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM-QREEF 255
Query: 69 KPDKFTLASTLSA-----------------------------------CTNLENMNLGKQ 93
KPD+ T S LS C LE +++ ++
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEK 315
Query: 94 IHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKL 153
+H Y+I+ F+ +NALI +Y K G V+ A + Q I + ++ +L+ +
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ--IRNKGIESWNSLITSFVDA 373
Query: 154 GDITPARQIFDSLR--------NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
G + A +F L +VV WT++I G G DD+LE FR M N
Sbjct: 374 GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN 433
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
S T+ +LS+ + +LN G++IH IR+ +I V NAL+ MYAK G + VF
Sbjct: 434 SVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFE 493
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
I + D +SW+S+I HG E+A+ +F++M++ G PD I V VLSAC+H GLVE
Sbjct: 494 AI-RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
+GR F M+ +EP HYAC++DL GR G L+EA + ++NMP+EP V G+LL+S
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNS 612
Query: 386 CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQ 445
C+++KNVD+A+ A +L ++EP+ +G+Y L+N+YSA G+WE++A +R L + +KK
Sbjct: 613 CRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVS 672
Query: 446 GSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEI 501
GSSW+E++ + + F + + + + IY +++ + + K G D ++ DL++
Sbjct: 673 GSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLDL 728
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 128/553 (23%), Positives = 233/553 (42%), Gaps = 96/553 (17%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D+ WNS++ HG + ALEL+ M Q L D + L L AC L L +
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQ-RGLTGDGYILPLILRACRYLGRFGLCRAF 180
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
H+ +I+ + V N L+++Y K G + A + + + + +++ ++ G+++
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR--NRMSWNVMIKGFSQEY 238
Query: 155 DITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
D A +IF+ ++ D V WT+++ + Q G +D L+ F M G + LA
Sbjct: 239 DCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALA 298
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI--- 267
SV + +L+ +++H I+ + + NALI +Y K G + +A+ +F I
Sbjct: 299 VFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNK 358
Query: 268 ---CWNN--------------------------------DTVSWSSMIIALAQHGLGEEA 292
WN+ + V+W+S+I G G+++
Sbjct: 359 GIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDS 418
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMID 352
+E F +M + + +T +LS C + + GR + E L A +++
Sbjct: 419 LEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNA-LVN 477
Query: 353 LYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNS 410
+Y + GLL E E + + D+I+W S++ ++ + A +R++ PD
Sbjct: 478 MYAKCGLLSEGSLVFEAIR-DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG- 535
Query: 411 GAYSALANVYSAC---GKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHP 467
AL V SAC G E +I M+ R FG E P
Sbjct: 536 ---IALVAVLSACSHAGLVEKGREIFYSMSKR-------------------FGLE----P 569
Query: 468 QKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLL-------RYHSEKLAIAFG 520
Q++ ++D + ++GF+ + ++ ++ +E K +L R H + + IA G
Sbjct: 570 QQEHYACIVDL----LGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMH-KNVDIAEG 624
Query: 521 IIST-----PENT 528
I S PE T
Sbjct: 625 IASQLSVLEPERT 637
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 45/280 (16%)
Query: 146 LLDGYAKLGDITPARQIFDSLRN---RDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP 202
L+ YA+LG + AR +F+++ D+ W +++ V +GL ++ALEL+R M + G
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 203 RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQK 262
+ + L +L + H I+ ++ V N L+T+Y KAG + +A
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
+F + N +SW+ MI +Q E A+++FE M +PD +T+ VLS + G
Sbjct: 215 LFVEMPVRN-RMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 323 LVEQGRSYFNLM----------------------------ASVH------KIEPTLSHYA 348
E YF+LM VH E L
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN 333
Query: 349 CMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSS 385
+I +YG+ G +++A F+ I N IE +W SL++S
Sbjct: 334 ALIHVYGKQGKVKDAEHLFRQIRNKGIE----SWNSLITS 369
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 226 KQIHASAIRSREDL-SISVGNALITMYAKAGSIDNAQKVFNLICWN--NDTVSWSSMIIA 282
+Q+HA + S S S+ LI++YA+ G + +A+ VF + +D W+S++ A
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 283 LAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP 342
HGL E A+EL+ M G+ D +L AC ++G R++ + + ++
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQI-GLKE 191
Query: 343 TLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERL 402
L ++ LY +AG + +A+ MP+ + ++W ++ + + A E +
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVR-NRMSWNVMIKGFSQEYDCESAVKIFEWM 250
Query: 403 LLIE--PDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG--VKKEQGSSWLEIQNEVHI 458
E PD ++++ + +S CGK+ED K LM G V E + + + E+
Sbjct: 251 QREEFKPDEV-TWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 459 FGAEDSLH 466
+ +H
Sbjct: 310 LSIAEKVH 317
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 263/448 (58%), Gaps = 5/448 (1%)
Query: 39 WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
+N +I Y H E++ L++ +L L+P T +A + + + +HS
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYN-LLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQF 108
Query: 99 IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITP 158
R+ F+ LI+ YAK G + ARRV + E+S D + A++ GY + GD+
Sbjct: 109 FRSGFESDSFCCTTLITAYAKLGALCCARRVFD--EMSKRDVPVWNAMITGYQRRGDMKA 166
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSS 217
A ++FDS+ ++V +WT +I G+ QNG +AL++F M K+ +PN T+ ++L +
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226
Query: 218 RGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWS 277
L G+++ A + +I V NA I MY+K G ID A+++F + + SW+
Sbjct: 227 NLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWN 286
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASV 337
SMI +LA HG +EA+ LF +ML G +PD +T+VG+L AC H G+V +G+ F M V
Sbjct: 287 SMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEV 346
Query: 338 HKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKI 397
HKI P L HY CMIDL GR G LQEA+ I+ MP++PD + WG+LL +C + NV++A+I
Sbjct: 347 HKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEI 406
Query: 398 AAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSW-LEIQNEV 456
A+E L +EP N G ++N+Y+A KW+ ++RKLM + K G S+ +E+ +V
Sbjct: 407 ASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDV 466
Query: 457 HIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
H F ED HP+ EIY+++++I+ +K
Sbjct: 467 HKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 140/287 (48%), Gaps = 35/287 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + WN MI+ + G + A+ F M +++ +W ++I+G++Q+G EAL++F M
Sbjct: 146 RDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCM 205
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+D S+KP+ T+ S L AC NL + +G+++ Y F + V NA I MY+K G
Sbjct: 206 EKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGM 265
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
++VA+R+ E+ LG+ R++ +W +MI
Sbjct: 266 IDVAKRLFEE--------------------LGN------------QRNLCSWNSMIGSLA 293
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G +D+AL LF M +EG +P++ T +L G + G+++ S + +S
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKS-MEEVHKISPK 352
Query: 243 VGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG 287
+ + +I + + G + A + + D V W +++ A + HG
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
LL + ++ AR++FD +N + +I Y + +++ L+ ++ +G RP+
Sbjct: 22 LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS 81
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF- 264
T + + S+ +S + +H+ RS + LIT YAK G++ A++VF
Sbjct: 82 HHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFD 141
Query: 265 -----NLICWN------------------------NDTVSWSSMIIALAQHGLGEEAIEL 295
++ WN + SW+++I +Q+G EA+++
Sbjct: 142 EMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKM 201
Query: 296 FEKMLA-LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC--MID 352
F M ++P+HIT V VL AC ++G +E GR L + + Y C I+
Sbjct: 202 FLCMEKDKSVKPNHITVVSVLPACANLGELEIGR---RLEGYARENGFFDNIYVCNATIE 258
Query: 353 LYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
+Y + G++ A + E + + ++ +W S++ S + D A
Sbjct: 259 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEA 301
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 288/558 (51%), Gaps = 71/558 (12%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++S++ GR D A F+ MS D VTWN MI+GY Q G +E+L F M+ S +
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS-SGV 336
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYI---------------IRTEFDISGA----- 108
PD T +S L + + EN+ KQIH YI I F G
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 109 -----------VQNALISMYAKTG----GVEVARRVV-------EQSEISDLDAIAF--- 143
V A+IS Y G +E+ R +V E + +S L I
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 144 -----------------------TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
A++D YAK G + A +IF+ L RD+V+W +MI
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
Q+ A+++FR M G + +++A LS + S + GK IH I+
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
+ + LI MYAK G++ A VF + N VSW+S+I A HG ++++ LF +M+
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKN-IVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 301 -ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
GI PD IT++ ++S+C HVG V++G +F M + I+P HYAC++DL+GRAG
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANV 419
L EA++ +++MP PD WG+LL +C+++KNV+LA++A+ +L+ ++P NSG Y ++N
Sbjct: 696 LTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNA 755
Query: 420 YSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
++ +WE K+R LM +R V+K G SW+EI H+F + D HP+ IY +++ +
Sbjct: 756 HANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Query: 480 WEEIKKLGFIPDTDSVLH 497
E++ G+IP LH
Sbjct: 816 LGELRLEGYIPQPYLPLH 833
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 184/377 (48%), Gaps = 39/377 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I ++ G+ID+ F ++ ++D V WN M+ GY + G ++ FS M D + P
Sbjct: 179 LIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISP 237
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ T LS C + ++LG Q+H ++ + D G+++N+L+SMY+K
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC---------- 287
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
G A ++F + D V W MI GYVQ+GL +++
Sbjct: 288 -----------------------GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES 324
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L F M G P++ T +++L S+ +L + KQIH +R L I + +ALI
Sbjct: 325 LTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y K + AQ +F+ C + D V +++MI +GL +++E+F ++ + I P+ IT
Sbjct: 385 YFKCRGVSMAQNIFSQ-CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEIT 443
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC-MIDLYGRAGLLQEAFKFIEN 369
V +L + ++ GR + + K + C +ID+Y + G + A++ E
Sbjct: 444 LVSILPVIGILLALKLGRELHGFI--IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER 501
Query: 370 MPIEPDVIAWGSLLSSC 386
+ + D+++W S+++ C
Sbjct: 502 LS-KRDIVSWNSMITRC 517
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 45/330 (13%)
Query: 36 IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIH 95
I WNS+I+ + ++G +AL + ML + PD T + AC L+N
Sbjct: 103 IRPWNSIISSFVRNGLLNQALAFYFKMLC-FGVSPDVSTFPCLVKACVALKNFK------ 155
Query: 96 SYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGD 155
G++ V + D + ++L+ Y + G
Sbjct: 156 --------------------------GIDFLSDTVSSLGM-DCNEFVASSLIKAYLEYGK 188
Query: 156 ITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSV 215
I ++FD + +D V W M+ GY + G D ++ F M + PN+ T +LSV
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 216 SSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVS 275
+ ++ G Q+H + S D S+ N+L++MY+K G D+A K+F ++ DTV+
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVT 307
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA 335
W+ MI Q GL EE++ F +M++ G+ PD IT+ +L + S F +
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV----------SKFENLE 357
Query: 336 SVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
+I + ++ +D++ + L+ FK
Sbjct: 358 YCKQIHCYIMRHSISLDIFLTSALIDAYFK 387
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 139/356 (39%), Gaps = 67/356 (18%)
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSE 134
L+ L AC+N + GKQ+H+++I ++ MYA G
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCG------------S 85
Query: 135 ISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
SD + + LD LR + W ++I +V+NGL + AL +
Sbjct: 86 FSDCGKMFYR--LD-----------------LRRSSIRPWNSIISSFVRNGLLNQALAFY 126
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
M G P+ T ++ + + + D + V ++LI Y +
Sbjct: 127 FKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEY 186
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
G ID K+F+ + D V W+ M+ A+ G + I+ F M I P+ +T+ V
Sbjct: 187 GKIDVPSKLFDRV-LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCV 245
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIE-------PTLSHYA------------------- 348
LS C L++ G L+ V ++ LS Y+
Sbjct: 246 LSVCASKLLIDLGVQLHGLVV-VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 349 -----CMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSCKVYKNVDLAK 396
CMI Y ++GL++E+ F M + PD I + SLL S ++N++ K
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCK 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 54/87 (62%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+ S + +I ++ G + A+ F+ M E++IV+WNS+IA HG K++L LF M++
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLG 91
S ++PD+ T +S+C ++ +++ G
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEG 663
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/503 (34%), Positives = 287/503 (57%), Gaps = 16/503 (3%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
WN ++ +M G +A F +M D+ ++N MI GY + GF EAL+L+ M+ D
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG- 227
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIR--TEFDISGAVQNALISMYAKTGGVEV 125
++PD++T+ S L C +L ++ LGK +H +I R + + + NAL+ MY K +
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
A+R + + D+ + + ++ G+ +LGD+ A+ +FD + RD+V+W +++ GY + G
Sbjct: 288 AKRAFDAMKKKDMRS--WNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG 345
Query: 186 LNDDAL-ELFRAMT-KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
+ + ELF MT E +P+ T+ +++S ++ L+HG+ +H IR + +
Sbjct: 346 CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFL 405
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
+ALI MY K G I+ A VF D W+SMI LA HG G++A++LF +M G
Sbjct: 406 SSALIDMYCKCGIIERAFMVFKTAT-EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG 464
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
+ P+++T + VL+AC+H GLVE+G FN M +P HY ++DL RAG ++EA
Sbjct: 465 VTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA 524
Query: 364 FKFIE-NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSA 422
++ MP+ P WGS+LS+C+ ++++ A++A LL +EP+ G Y L+N+Y+
Sbjct: 525 KDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYAT 584
Query: 423 CGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIF-GAEDSLHPQKDEIYKMMDKIWE 481
G+W + K R+ M +RGVKK G S + +H F AE HP+ EI +++ ++
Sbjct: 585 VGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYN 644
Query: 482 EIKKLGFIPDTDSVLHDLEIEVK 504
E+K P D L LEIE+K
Sbjct: 645 EMK-----PKLD-CLDLLEIEIK 661
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 138/317 (43%), Gaps = 67/317 (21%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEAL-ELFSS 61
+ + SWN M+ + G ++ A A F QM +RD+V+WNS++ GY++ G D+ + ELF
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M +KPD+ T+ S +S N ++ G+ +H +IR + + +ALI MY K G
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+E A +F + +DV WT+MI G
Sbjct: 418 IIE---------------------------------RAFMVFKTATEKDVALWTSMITGL 444
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
+G AL+LF M +EG PN+ TL A+L+ S + G +
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH---------- 494
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
M K G ++ +T + S++ L + G EEA ++ +K +
Sbjct: 495 --------MKDKFG-------------FDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMP 533
Query: 302 LGIEPDHITYVGVLSAC 318
+ P + +LSAC
Sbjct: 534 M--RPSQSMWGSILSAC 548
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 265/469 (56%), Gaps = 35/469 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N + +++ G + L F+ MSERD+V+W S+I Y + G + +A+E F M ++S +
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM-RNSQV 306
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P++ T AS SAC +L + G+Q+H ++ + S +V N+++ MY+ G
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCG------- 359
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
++ A +F +R RD+++W+ +I GY Q G +
Sbjct: 360 --------------------------NLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+ + F M + G +P F LA++LSVS A + G+Q+HA A+ + + +V ++LI
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLI 453
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MY+K GSI A +F +D VS ++MI A+HG +EAI+LFEK L +G PD
Sbjct: 454 NMYSKCGSIKEASMIFGET-DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDS 512
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+T++ VL+ACTH G ++ G YFN+M + + P HY CM+DL RAG L +A K I
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
M + D + W +LL +CK +++ + AAER+L ++P + A LAN+YS+ G E+
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEE 632
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMD 477
AA +RK M +GV KE G S ++I++ V F + D HPQ ++IY +++
Sbjct: 633 AANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 199/452 (44%), Gaps = 69/452 (15%)
Query: 16 MNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM-LQDSSLKPDKFT 74
+N+G + A F +M DIV+W S+I Y EAL LFS+M + D ++ PD
Sbjct: 51 INAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSE 134
L+ L AC N+ G+ +H+Y ++T L S+Y +
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSL---------LSSVYVGS-------------- 147
Query: 135 ISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
+LLD Y ++G I + ++F + R+ V WTA+I G V G + L F
Sbjct: 148 ----------SLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYF 197
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
M++ +++T A L + + +GK IH I ++ V N+L TMY +
Sbjct: 198 SEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC 257
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
G + + +F + D VSW+S+I+A + G +A+E F KM + P+ T+ +
Sbjct: 258 GEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASM 316
Query: 315 LSACTHVGLVEQGRS-YFNLMA-----------SVHKIEPTLSH---------------- 346
SAC + + G + N+++ S+ K+ T +
Sbjct: 317 FSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDI 376
Query: 347 --YACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSCKVYKNVDLAK-IAAE 400
++ +I Y +AG +E FK+ M +P A SLLS ++ + + A
Sbjct: 377 ISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHAL 436
Query: 401 RLLLIEPDNSGAYSALANVYSACGKWEDAAKI 432
L NS S+L N+YS CG ++A+ I
Sbjct: 437 ALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 173/363 (47%), Gaps = 38/363 (10%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
L S+ + ++ ++ G+ID + F +M R+ VTW ++I G G KE L FS
Sbjct: 140 LSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSE 199
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M + L D +T A L AC L + GK IH+++I F + V N+L +MY + G
Sbjct: 200 MSRSEELS-DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECG 258
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
++ + E +S+ D +++T+L+ Y ++G A + F +RN V
Sbjct: 259 EMQDGLCLFEN--MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQV---------- 306
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
PN T A+M S + + L G+Q+H + + + S+
Sbjct: 307 ---------------------PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSL 345
Query: 242 SVGNALITMYAKAGSIDNAQKVFN-LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
SV N+++ MY+ G++ +A +F + C D +SWS++I Q G GEE + F M
Sbjct: 346 SVSNSMMKMYSTCGNLVSASVLFQGMRC--RDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
G +P +LS ++ ++E GR + +A +E + + +I++Y + G +
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 361 QEA 363
+EA
Sbjct: 463 KEA 465
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 152/301 (50%), Gaps = 37/301 (12%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
S++ N M+ ++ G + A FQ M RDI++W+++I GY Q GF +E + FS M
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
Q S KP F LAS LS N+ + G+Q+H+ + + + V+++LI+MY+K G +
Sbjct: 404 Q-SGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
+ A + +++ D+ ++ TA+++GYA +
Sbjct: 463 KEASMIFGETDRDDI--VSLTAMINGYA-------------------------------E 489
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
+G + +A++LF K G RP+S T ++L+ + L+ G + + ++ ++ +
Sbjct: 490 HGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH-YFNMMQETYNMRPAK 548
Query: 244 GN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
+ ++ + +AG + +A+K+ N + W D V W++++IA G E E++L
Sbjct: 549 EHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 608
Query: 302 L 302
L
Sbjct: 609 L 609
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 280/495 (56%), Gaps = 13/495 (2%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+ +W ++ +MN+ + + AL F +M +R WN MI+G+ G + L LF M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 63 LQDSSLKPDKFTLASTLSACT-NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
L+ S KPD +T +S ++AC+ + N+ G+ +H+ +++ + + +N+++S Y K G
Sbjct: 196 LE-SEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+ A R +E E+ L +++ +++D K+G+ A ++F +++V WT MI GY
Sbjct: 255 SRDDAMRELESIEV--LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGY 312
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
+NG + AL F M K G + F A+L S A L HGK IH I
Sbjct: 313 GRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
VGNAL+ +YAK G I A + F I N D VSW++M+ A HGL ++A++L++ M+A
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQALKLYDNMIA 431
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
GI+PD++T++G+L+ C+H GLVE+G F M ++I + H CMID++GR G L
Sbjct: 432 SGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLA 491
Query: 362 E----AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALA 417
E A + + + +W +LL +C + + +L + ++ L + EP ++ L+
Sbjct: 492 EAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLS 551
Query: 418 NVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMD 477
N+Y + G+W++ +R+ M +RG+KK G SW+E+ N+V F DS HP+ +E+ + ++
Sbjct: 552 NLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLN 611
Query: 478 KIWEEIKKLGFIPDT 492
+ E++ P+T
Sbjct: 612 CLQHEMRN----PET 622
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 208/429 (48%), Gaps = 44/429 (10%)
Query: 18 SGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAS 77
SGRI A F M E D V WN+M+ Y++ G +EA+ LF+ L+ S KPD ++ +
Sbjct: 17 SGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ-LRFSDAKPDDYSFTA 75
Query: 78 TLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISD 137
LS C +L N+ G++I S +IR+ F S V N+LI MY K A +V
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 138 LDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM 197
+ + + +LL Y A +F + R AW MI G+ G + L LF+ M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 198 TKEGPRPNSFTLAAMLSVSSRGAS-LNHGKQIHASAIRSREDLSISVGNALITMYAKAGS 256
+ +P+ +T +++++ S +S + +G+ +HA +++ ++ N++++ Y K GS
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 257 IDNAQK------VFNLICWNN------------------------DTVSWSSMIIALAQH 286
D+A + V + WN+ + V+W++MI ++
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 287 GLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSH 346
G GE+A+ F +M+ G++ DH Y VL AC+ + L+ G+ + I
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL-----IHCGFQG 370
Query: 347 YA----CMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERL 402
YA +++LY + G ++EA + ++ D+++W ++L + V+ D A + +
Sbjct: 371 YAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQALKLYDNM 429
Query: 403 LL--IEPDN 409
+ I+PDN
Sbjct: 430 IASGIKPDN 438
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 146/338 (43%), Gaps = 38/338 (11%)
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
+ T+ + AK G I ARQ+FD + D VAW M+ Y + GL+ +A+ LF +
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
+P+ ++ A+LS + ++ G++I + IRS S+ V N+LI MY K +A
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 261 QKVF-NLICWNNDTVSWSSMIIAL-------------------------------AQHGL 288
KVF ++ C + + V+W S++ A A G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 289 GEEAIELFEKMLALGIEPDHITYVGVLSACT-HVGLVEQGRSYFNLMASVHKIEPTLSHY 347
E + LF++ML +PD T+ +++AC+ V GR +M + +
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLK-NGWSSAVEAK 243
Query: 348 ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEP 407
++ Y + G +A + +E++ + V +W S++ +C + + A E L
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQV-SWNSIIDAC---MKIGETEKALEVFHLAPE 299
Query: 408 DNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQ 445
N ++ + Y G E A + M GV +
Sbjct: 300 KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDH 337
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 281/494 (56%), Gaps = 35/494 (7%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+ I+ N +I+ + G F MS R+++T ++I+G ++ ++ L LFS +
Sbjct: 188 KEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFS-L 246
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ + P+ T S L+AC+ + + G+QIH AL+ Y G
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQQIH----------------ALLWKY----G 286
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E + +E +AL+D Y+K G I A IF+S D V+ T ++VG
Sbjct: 287 IE-SELCIE------------SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
QNG ++A++ F M + G ++ ++A+L VS SL GKQ+H+ I+ + +
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
V N LI MY+K G + ++Q VF + N VSW+SMI A A+HG G A++L+E+M L
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRN-YVSWNSMIAAFARHGHGLAALKLYEEMTTL 452
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
++P +T++ +L AC+HVGL+++GR N M VH IEP HY C+ID+ GRAGLL+E
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKE 512
Query: 363 AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSA 422
A FI+++P++PD W +LL +C + + ++ + AAE+L PD+S A+ +AN+YS+
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSS 572
Query: 423 CGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEE 482
GKW++ AK K M GV KE G S +EI+++ H F ED LHPQ + IY ++ ++
Sbjct: 573 RGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPV 632
Query: 483 IKKLGFIPDTDSVL 496
+ G+ PD +L
Sbjct: 633 MVDEGYRPDKRFIL 646
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 180/386 (46%), Gaps = 46/386 (11%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++ WN ++SL+ G++ A+ F +M RD+++ N + G+ ++ + L ML
Sbjct: 89 ALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRML 148
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
D TL LS C E + K IH+ I + +D +V N LI+ Y K G
Sbjct: 149 GSGGF--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS 206
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
R +FD + +R+V+ TA+I G ++
Sbjct: 207 ---------------------------------VSGRGVFDGMSHRNVITLTAVISGLIE 233
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
N L++D L LF M + PNS T + L+ S + G+QIHA + + + +
Sbjct: 234 NELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCI 293
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
+AL+ MY+K GSI++A +F D VS + +++ LAQ+G EEAI+ F +ML G
Sbjct: 294 ESALMDMYSKCGSIEDAWTIFESTT-EVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 304 IEPDHITYVGVLSACTHVGLVEQ----GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
+E D V+SA V ++ G+ +L+ T + +I++Y + G
Sbjct: 353 VEID----ANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNG-LINMYSKCGD 407
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSS 385
L ++ MP + + ++W S++++
Sbjct: 408 LTDSQTVFRRMP-KRNYVSWNSMIAA 432
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 285/514 (55%), Gaps = 50/514 (9%)
Query: 20 RIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
R+DLA++ QM E ++ +N++ G+ +LEL+ ML+DS + P +T +S +
Sbjct: 75 RLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDS-VSPSSYTYSSLV 133
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
A + G+ + ++I + F +Q LI Y+ TG + AR+V + E+ + D
Sbjct: 134 KASSFASR--FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFD--EMPERD 189
Query: 140 AIAFTA-------------------------------LLDGYAKLGDITPARQIFDSLRN 168
IA+T L++GY LG++ A +F+ +
Sbjct: 190 DIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV 249
Query: 169 RDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQI 228
+D+++WT MI GY QN +A+ +F M +EG P+ T++ ++S + L GK++
Sbjct: 250 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 309
Query: 229 HASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF------NLICWNNDTVSWSSMIIA 282
H +++ L + +G+AL+ MY+K GS++ A VF NL CWN S+I
Sbjct: 310 HMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWN-------SIIEG 362
Query: 283 LAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP 342
LA HG +EA+++F KM ++P+ +T+V V +ACTH GLV++GR + M + I
Sbjct: 363 LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVS 422
Query: 343 TLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERL 402
+ HY M+ L+ +AGL+ EA + I NM EP+ + WG+LL C+++KN+ +A+IA +L
Sbjct: 423 NVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 482
Query: 403 LLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKK-EQGSSWLEIQNEVHIFGA 461
+++EP NSG Y L ++Y+ +W D A+IR M + G++K G+S + I H+F A
Sbjct: 483 MVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAA 542
Query: 462 EDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSV 495
D H DE+ ++D+I++++ G++ +T++V
Sbjct: 543 ADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 576
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 158/312 (50%), Gaps = 45/312 (14%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I+ +M G ++ A + F QM +DI++W +MI GY+Q+ +EA+ +F M+++ +
Sbjct: 225 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 284
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD+ T+++ +SAC +L + +GK++H Y ++ F + + +AL+ MY+K G +E
Sbjct: 285 -PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLE---- 339
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
ALL +F +L +++ W ++I G +G
Sbjct: 340 ---------------RALL--------------VFFNLPKKNLFCWNSIIEGLAAHGFAQ 370
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--- 245
+AL++F M E +PN+ T ++ + + ++ G++I+ S I +D SI V N
Sbjct: 371 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI---DDYSI-VSNVEH 426
Query: 246 --ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
++ +++KAG I A ++ + + + V W +++ H A F K++ L
Sbjct: 427 YGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVL- 485
Query: 304 IEPDHITYVGVL 315
EP + Y +L
Sbjct: 486 -EPMNSGYYFLL 496
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 264/469 (56%), Gaps = 41/469 (8%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAST 78
G + A F ++ + D+ N ++ G Q ++ + L++ M + + PD++T
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFV 118
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALI------------------------ 114
L AC+ LE + G H ++R F ++ V+NALI
Sbjct: 119 LKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 115 -------SMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR 167
S YAK G ++ A R+ + E+ D +A+ ++ G K ++ AR++FD
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFD--EMPYKDQVAWNVMITGCLKCKEMDSARELFDRFT 236
Query: 168 NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQ 227
+DVV W AMI GYV G +AL +F+ M G P+ T+ ++LS + L GK+
Sbjct: 237 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 296
Query: 228 IH-----ASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIA 282
+H +++ S + + NALI MYAK GSID A +VF + + D +W+++I+
Sbjct: 297 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DRDLSTWNTLIVG 355
Query: 283 LAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP 342
LA H E +IE+FE+M L + P+ +T++GV+ AC+H G V++GR YF+LM ++ IEP
Sbjct: 356 LALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEP 414
Query: 343 TLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERL 402
+ HY CM+D+ GRAG L+EAF F+E+M IEP+ I W +LL +CK+Y NV+L K A E+L
Sbjct: 415 NIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKL 474
Query: 403 LLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLE 451
L + D SG Y L+N+Y++ G+W+ K+RK+ +D VKK G S +E
Sbjct: 475 LSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 156/358 (43%), Gaps = 76/358 (21%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
+WN+MI+ + +D A F + +E+D+VTWN+MI+GY G+ KEAL +F M +D
Sbjct: 210 VAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM-RD 268
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRT-----EFDISGAVQNALISMYAKT 120
+ PD T+ S LSAC L ++ GK++H YI+ T + + NALI MYAK
Sbjct: 269 AGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G ++ R +E +F +++RD+ W +IVG
Sbjct: 329 GSID---RAIE------------------------------VFRGVKDRDLSTWNTLIVG 355
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
+ + ++E+F M + PN T ++ S ++ G++ + S +R
Sbjct: 356 LALHHA-EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK-YFSLMRD----- 408
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
MY +I + + M+ L + G EEA E M
Sbjct: 409 ---------MYNIEPNIKH----------------YGCMVDMLGRAGQLEEAFMFVESM- 442
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG 358
IEP+ I + +L AC G VE G+ + S+ K E Y + ++Y G
Sbjct: 443 --KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDES--GDYVLLSNIYASTG 496
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 156/348 (44%), Gaps = 32/348 (9%)
Query: 154 GDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAML 213
G + A ++FD + DV ++ G Q+ + + L+ M K G P+ +T +L
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 214 SVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDT 273
S+ ++G H +R L+ V NALI +A G + A ++F+
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA-KAHK 178
Query: 274 VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNL 333
V+WSSM A+ G +EA+ LF++M D + + +++ C ++ R F+
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPY----KDQVAWNVMITGCLKCKEMDSARELFDR 234
Query: 334 MASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSSCKVYK 390
E + + MI Y G +EA FK + + PDV+ SLLS+C V
Sbjct: 235 FT-----EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 391 NVDLAKIAAERLLLIEPDNSGAY------SALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
+++ K +L +S Y +AL ++Y+ CG + A ++ RGVK
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVF-----RGVKDR 344
Query: 445 QGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMD--KIW-EEIKKLGFI 489
S+W + + + AE S+ E+++ M K+W E+ +G I
Sbjct: 345 DLSTWNTLIVGLALHHAEGSI-----EMFEEMQRLKVWPNEVTFIGVI 387
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 265/442 (59%), Gaps = 35/442 (7%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+T + + +L+ G ++ + FQ + +D W SMI+G+N++G+ +EA+ LFS ML
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
D + PD+ TLA+ L+ C++ ++ GK+IH Y +R D + +AL++MY+K G ++
Sbjct: 545 DGT-SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLK 603
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
+AR+V ++ + +LD ++ ++L+ GY+ Q+
Sbjct: 604 LARQVYDR--LPELDPVSCSSLISGYS-------------------------------QH 630
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
GL D LFR M G +SF ++++L ++ + G Q+HA + SVG
Sbjct: 631 GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG 690
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
++L+TMY+K GSID+ K F+ I D ++W+++I + AQHG EA++++ M G
Sbjct: 691 SSLLTMYSKFGSIDDCCKAFSQI-NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGF 749
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
+PD +T+VGVLSAC+H GLVE+ + N M + IEP HY CM+D GR+G L+EA
Sbjct: 750 KPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAE 809
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
FI NM I+PD + WG+LL++CK++ V+L K+AA++ + +EP ++GAY +L+N+ + G
Sbjct: 810 SFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVG 869
Query: 425 KWEDAAKIRKLMNDRGVKKEQG 446
+W++ + RKLM GV+KE G
Sbjct: 870 EWDEVEETRKLMKGTGVQKEPG 891
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 211/442 (47%), Gaps = 87/442 (19%)
Query: 11 MISLHMNSGRIDLALAQFQQMSE---RDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
+IS++ SG IDL+ F+ + + ++IV N MI ++Q +A+ LF+ MLQ+
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEG- 448
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
L+ D+F++ S LS L+ +NLGKQ+H Y +++ + V ++L ++Y+K G +E
Sbjct: 449 LRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE--- 502
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
+ ++F + +D W +MI G+ + G
Sbjct: 503 ------------------------------ESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+A+ LF M +G P+ TLAA+L+V S SL GK+IH +R+ D + +G+AL
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL 592
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ MY+K GS+ A++V++ + D VS SS+I +QHGL ++ LF M+ G D
Sbjct: 593 VNMYSKCGSLKLARQVYDRL-PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMD 651
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKI----EPTLSHYACMIDLYGRAGLLQEA 363
+L A L ++ + A + KI EP++ + ++ +Y + G + +
Sbjct: 652 SFAISSILKA---AALSDESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSKFGSIDDC 706
Query: 364 FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
K + PD+IAW +L++S Y+
Sbjct: 707 CKAFSQIN-GPDLIAWTALIAS----------------------------------YAQH 731
Query: 424 GKWEDAAKIRKLMNDRGVKKEQ 445
GK +A ++ LM ++G K ++
Sbjct: 732 GKANEALQVYNLMKEKGFKPDK 753
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 189/379 (49%), Gaps = 49/379 (12%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ L+ G + A+ F ++ +V+W M++GY + ALE+F M + S ++
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM-RHSGVEI 349
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ T+ S +SAC + Q+H+++ ++ F + +V ALISMY
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMY------------- 396
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIF---DSLRNRDVVAWTAMIVGYVQNGLN 187
+K GDI + Q+F D ++ +++V MI + Q+
Sbjct: 397 --------------------SKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKP 434
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
A+ LF M +EG R + F++ ++LSV LN GKQ+H ++S L ++VG++L
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQVHGYTLKSGLVLDLTVGSSL 491
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
T+Y+K GS++ + K+F I + D W+SMI ++G EAI LF +ML G PD
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPF-KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPD 550
Query: 308 HITYVGVLSACTHVGLVEQGRSY--FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
T VL+ C+ + +G+ + L A + K + + ++++Y + G L+ A +
Sbjct: 551 ESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK---GMDLGSALVNMYSKCGSLKLARQ 607
Query: 366 FIENMPIEPDVIAWGSLLS 384
+ +P E D ++ SL+S
Sbjct: 608 VYDRLP-ELDPVSCSSLIS 625
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 40/370 (10%)
Query: 20 RIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
R + A F+ ++ WN++IAG ++ +LF M KPD +T +S L
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVL 258
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
+AC +LE + GK + + +I+ G E D
Sbjct: 259 AACASLEKLRFGKVVQARVIKC--------------------GAE--------------D 284
Query: 140 AIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTK 199
TA++D YAK G + A ++F + N VV+WT M+ GY ++ ALE+F+ M
Sbjct: 285 VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH 344
Query: 200 EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDN 259
G N+ T+ +++S R + + Q+HA +S L SV ALI+MY+K+G ID
Sbjct: 345 SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDL 404
Query: 260 AQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT 319
+++VF + + MI + +Q +AI LF +ML G+ D + +LS
Sbjct: 405 SEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD 464
Query: 320 HVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
+ L +Q Y + S ++ T+ + + LY + G L+E++K + +P + D W
Sbjct: 465 CLNLGKQVHGY--TLKSGLVLDLTVG--SSLFTLYSKCGSLEESYKLFQGIPFK-DNACW 519
Query: 380 GSLLSSCKVY 389
S++S Y
Sbjct: 520 ASMISGFNEY 529
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 30/372 (8%)
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
+SLK F+ + LS+ TN N S F+ + S ++
Sbjct: 10 NSLKISPFSTSRLLSSVTNFRNQLSFSSKDSSSSSAPFNPFRFFNDQSNSRLCNLRTTKI 69
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
+ + + + D +LL Y+ G + A ++FD++ DVV+ MI GY Q+
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
L +++L F M G N + +++S S + + + I+ V +
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 246 ALITMYAKAGSIDNAQKVF------NLICWNNDTVSWSSMIIALAQHGLGEEAI-ELFEK 298
ALI +++K ++A KVF N+ CWN IIA A A+ +LF +
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNT--------IIAGALRNQNYGAVFDLFHE 241
Query: 299 MLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC--MIDLYGR 356
M +PD TY VL+AC + + G+ + A V K + C ++DLY +
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKV---VQARVIKCGAE-DVFVCTAIVDLYAK 297
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAY--- 413
G + EA + +P P V++W +LS Y + A A E + E +SG
Sbjct: 298 CGHMAEAMEVFSRIP-NPSVVSWTVMLSG---YTKSNDAFSALE--IFKEMRHSGVEINN 351
Query: 414 SALANVYSACGK 425
+ +V SACG+
Sbjct: 352 CTVTSVISACGR 363
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 258/472 (54%), Gaps = 38/472 (8%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQM--SERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+T N IS + G +D A F+ + +R +V+WNSM Y+ G +A L+ M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
L++ KPD T + ++C N E + G+ IHS+ I D N ISMY+K+
Sbjct: 248 LREE-FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE- 305
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
D AR +FD + +R V+WT MI GY
Sbjct: 306 --------------------------------DTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA-IRSREDLSI 241
+ G D+AL LF AM K G +P+ TL +++S + SL GK I A A I + ++
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
+ NALI MY+K GSI A+ +F+ V+W++MI A +G+ EA++LF KM+
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMID 452
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
L +P+HIT++ VL AC H G +E+G YF++M V+ I P L HY+CM+DL GR G L+
Sbjct: 453 LDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLE 512
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYS 421
EA + I NM +PD WG+LL++CK+++NV +A+ AAE L +EP + Y +AN+Y+
Sbjct: 513 EALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYA 572
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIY 473
A G W+ A+IR +M R +KK G S +++ + H F + H + + IY
Sbjct: 573 AAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 178/374 (47%), Gaps = 36/374 (9%)
Query: 12 ISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPD 71
+ + + +D A F++M ERD TWN+M++G+ Q G +A LF M + + + PD
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM-RLNEITPD 152
Query: 72 KFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVE 131
T+ + + + + +++ L + +H+ IR D+ V N IS Y K G ++ A+ V E
Sbjct: 153 SVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFE 212
Query: 132 QSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDAL 191
+ D R VV+W +M Y G DA
Sbjct: 213 AIDRGD-------------------------------RTVVSWNSMFKAYSVFGEAFDAF 241
Query: 192 ELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
L+ M +E +P+ T + + +L G+ IH+ AI D I N I+MY
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMY 301
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
+K+ +A+ +F+++ + VSW+ MI A+ G +EA+ LF M+ G +PD +T
Sbjct: 302 SKSEDTCSARLLFDIMT-SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASVHKIE-PTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+ ++S C G +E G+ + + A ++ + + +ID+Y + G + EA +N
Sbjct: 361 LSLISGCGKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 371 PIEPDVIAWGSLLS 384
P E V+ W ++++
Sbjct: 420 P-EKTVVTWTTMIA 432
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 178/430 (41%), Gaps = 70/430 (16%)
Query: 39 WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
WN I E+L LF M + +P+ FT AC L ++ + +H+++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 99 IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITP 158
I++ F D TA +D + K +
Sbjct: 79 IKSPFWS---------------------------------DVFVGTATVDMFVKCNSVDY 105
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR 218
A ++F+ + RD W AM+ G+ Q+G D A LFR M P+S T+ ++ +S
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF 165
Query: 219 GASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDT-VSWS 277
SL + +HA IR D+ ++V N I+ Y K G +D+A+ VF I + T VSW+
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWN 225
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR--------- 328
SM A + G +A L+ ML +PD T++ + ++C + + QGR
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHL 285
Query: 329 ------SYFNLMASVH-KIEPTLS--------------HYACMIDLYGRAGLLQEAFKFI 367
N S++ K E T S + MI Y G + EA
Sbjct: 286 GTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALF 345
Query: 368 ENM---PIEPDVIAWGSLLSSCKVYKNVDLAKIAAER--LLLIEPDNSGAYSALANVYSA 422
M +PD++ SL+S C + +++ K R + + DN +AL ++YS
Sbjct: 346 HAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSK 405
Query: 423 CGKWEDAAKI 432
CG +A I
Sbjct: 406 CGSIHEARDI 415
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 153/368 (41%), Gaps = 91/368 (24%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+ I + N IS++ S A F M+ R V+W MI+GY + G EAL LF +M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA------VQNALISM 116
++ S KPD TL S +S C ++ GK I + DI G + NALI M
Sbjct: 349 IK-SGEKPDLVTLLSLISGCGKFGSLETGKWIDA-----RADIYGCKRDNVMICNALIDM 402
Query: 117 YAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTA 176
Y+K G + AR IFD+ + VV WT
Sbjct: 403 YSKCGSIHEAR---------------------------------DIFDNTPEKTVVTWTT 429
Query: 177 MIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR 236
MI GY NG+ +AL+LF M +PN T A+L + SL G +
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYF------- 482
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELF 296
+ + +Y + +D+ +S M+ L + G EEA+EL
Sbjct: 483 --------HIMKQVYNISPGLDH----------------YSCMVDLLGRKGKLEEALELI 518
Query: 297 EKMLALGIEPDHITYVGVLSACT---HVGLVEQ-GRSYFNLMASVHKIEPTL-SHYACMI 351
M A +PD + +L+AC +V + EQ S FNL EP + + Y M
Sbjct: 519 RNMSA---KPDAGIWGALLNACKIHRNVKIAEQAAESLFNL-------EPQMAAPYVEMA 568
Query: 352 DLYGRAGL 359
++Y AG+
Sbjct: 569 NIYAAAGM 576
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Query: 171 VVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA 230
V AW I V ++L LFR M + G PN+FT + +R A + + +HA
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 231 SAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGE 290
I+S + VG A + M+ K S+D A KVF + D +W++M+ Q G +
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP-ERDATTWNAMLSGFCQSGHTD 135
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVH---KIEPTLSHY 347
+A LF +M I PD +T + ++ + + E+ M +V ++ ++
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 348 ACMIDLYGRAGLLQEAFKFIENMPI-EPDVIAWGSLLSSCKVY 389
I YG+ G L A E + + V++W S+ + V+
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVF 234
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 253/413 (61%), Gaps = 5/413 (1%)
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KPD FT L + ++ G+QIH ++ FD S V LI MY GG+ AR+
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN--RDVVAWTAMIVGYVQNGL 186
+ ++ + D++ + ALL GY K+G++ AR + + + R+ V+WT +I GY ++G
Sbjct: 173 MFDEMLVKDVNV--WNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGR 230
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+A+E+F+ M E P+ TL A+LS + SL G++I + + ++S+ NA
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNA 290
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
+I MYAK+G+I A VF + N V+W+++I LA HG G EA+ +F +M+ G+ P
Sbjct: 291 VIDMYAKSGNITKALDVFECVNERN-VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRP 349
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
+ +T++ +LSAC+HVG V+ G+ FN M S + I P + HY CMIDL GRAG L+EA +
Sbjct: 350 NDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKW 426
I++MP + + WGSLL++ V+ +++L + A L+ +EP+NSG Y LAN+YS G+W
Sbjct: 410 IKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRW 469
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
+++ +R +M GVKK G S +E++N V+ F + D HPQ + I++++ ++
Sbjct: 470 DESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 174/343 (50%), Gaps = 46/343 (13%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMS--ERDIVTWNSMIAGYNQHGFDKEALELF 59
++ + WN +++ + G +D A + + M R+ V+W +I+GY + G EA+E+F
Sbjct: 179 VKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVF 238
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
ML ++ ++PD+ TL + LSAC +L ++ LG++I SY+ + + ++ NA+I MYAK
Sbjct: 239 QRMLMEN-VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIV 179
+G +IT A +F+ + R+VV WT +I
Sbjct: 298 SG---------------------------------NITKALDVFECVNERNVVTWTTIIA 324
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
G +G +AL +F M K G RPN T A+LS S ++ GK++ S +RS+ +
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS-MRSKYGI 383
Query: 240 SISVGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
++ + +I + +AG + A +V + + + W S++ A H +EL E
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH----HDLELGE 439
Query: 298 KMLA--LGIEPDHI-TYVGVLSACTHVGLVEQGRSYFNLMASV 337
+ L+ + +EP++ Y+ + + +++G ++ R N+M +
Sbjct: 440 RALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGI 482
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 60/355 (16%)
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
A+ ++R + +P++FT +L ++ R + + G+QIH + D S+ V LI
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 250 MYAKAGSIDNAQKVFN--------------------------------LICWNNDTVSWS 277
MY G + +A+K+F+ + CW + VSW+
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR---SYFNLM 334
+I A+ G EAIE+F++ML +EPD +T + VLSAC +G +E G SY +
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD-- 277
Query: 335 ASVHK-IEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVD 393
H+ + +S +ID+Y ++G + +A E + E +V+ W ++++ + +
Sbjct: 278 ---HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGA 333
Query: 394 LAKIAAERLLL--IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLE 451
A R++ + P N + A+ + S G W D K +L N K +
Sbjct: 334 EALAMFNRMVKAGVRP-NDVTFIAILSACSHVG-WVDLGK--RLFNSMRSKYGIHPNIEH 389
Query: 452 IQNEVHIFGAEDSLHPQKDEIYKMMD-----KIWEEIKKLGFIPDTDSVLHDLEI 501
+ + G L + DE+ K M IW G + +V HDLE+
Sbjct: 390 YGCMIDLLGRAGKLR-EADEVIKSMPFKANAAIW------GSLLAASNVHHDLEL 437
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 271/479 (56%), Gaps = 44/479 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I ++ G++ A F +++ERD V+WNSMI+GY++ G+ K+A++LF M ++ +P
Sbjct: 169 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM-EEEGFEP 227
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D+ TL S L AC++L ++ G+ + I + +S + + LISMY K
Sbjct: 228 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKC---------- 277
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
GD+ AR++F+ + +D VAWTAMI Y QNG + +A
Sbjct: 278 -----------------------GDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEA 314
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQI--HASAIRSREDLSISVGNALI 248
+LF M K G P++ TL+ +LS +L GKQI HAS + + ++ ++ G L+
Sbjct: 315 FKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATG--LV 372
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MY K G ++ A +VF + N+ +W++MI A A G +EA+ LF++M + P
Sbjct: 373 DMYGKCGRVEEALRVFEAMPVKNEA-TWNAMITAYAHQGHAKEALLLFDRM---SVPPSD 428
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
IT++GVLSAC H GLV QG YF+ M+S+ + P + HY +IDL RAG+L EA++F+E
Sbjct: 429 ITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFME 488
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL-LIEPDNSGAYSALANVYSACGKWE 427
P +PD I ++L +C K+V + + A L+ + E N+G Y +NV + W+
Sbjct: 489 RFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWD 548
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIF-GAEDSLHPQKDEIYKMMDKIWEEIKK 485
++AK+R LM DRGV K G SW+EI+ E+ F D L +++ + D + EE+K+
Sbjct: 549 ESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKR 607
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 195/389 (50%), Gaps = 46/389 (11%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEA-LELFS 60
L S+ N +I + G + + F E + ++N MI G D EA L L+
Sbjct: 58 LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYR 117
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M + S LKPDKFT AC LE + +G+ +HS + + + + ++LI MYAK
Sbjct: 118 RM-KFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKC 176
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G V GYA R++FD + RD V+W +MI G
Sbjct: 177 GQV-------------------------GYA--------RKLFDEITERDTVSWNSMISG 203
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
Y + G DA++LFR M +EG P+ TL +ML S L G+ + AI + LS
Sbjct: 204 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 263
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
+G+ LI+MY K G +D+A++VFN + D V+W++MI +Q+G EA +LF +M
Sbjct: 264 TFLGSKLISMYGKCGDLDSARRVFNQMI-KKDRVAWTAMITVYSQNGKSSEAFKLFFEME 322
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSH--YAC--MIDLYGR 356
G+ PD T VLSAC VG +E G+ H E +L H Y ++D+YG+
Sbjct: 323 KTGVSPDAGTLSTVLSACGSVGALELGKQ-----IETHASELSLQHNIYVATGLVDMYGK 377
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
G ++EA + E MP++ + W +++++
Sbjct: 378 CGRVEEALRVFEAMPVKNEA-TWNAMITA 405
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 218/339 (64%), Gaps = 3/339 (0%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
D ++L+ Y G++ A ++F+ + R+VV+WTAMI G+ Q D L+L+ M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
K PN +T A+LS + +L G+ +H + + + N+LI+MY K G +
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL-GIEPDHITYVGVLSA 317
+A ++F+ N D VSW+SMI AQHGL +AIELFE M+ G +PD ITY+GVLS+
Sbjct: 274 DAFRIFDQFS-NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 318 CTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVI 377
C H GLV++GR +FNLMA H ++P L+HY+C++DL GR GLLQEA + IENMP++P+ +
Sbjct: 333 CRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 378 AWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMN 437
WGSLL SC+V+ +V AAE L++EPD + + LAN+Y++ G W++AA +RKLM
Sbjct: 392 IWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMK 451
Query: 438 DRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMM 476
D+G+K G SW+EI N V +F AED + + EI ++
Sbjct: 452 DKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVL 490
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 52/328 (15%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ L+ +SG ++ A F++M ER++V+W +MI+G+ Q L+L+S M + +S P
Sbjct: 161 LVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS-DP 219
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ +T + LSACT + G+ +H + + N+LISMY K G ++ A R+
Sbjct: 220 NDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF 279
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+Q S+ D +++ +++ GYA Q+GL A
Sbjct: 280 DQ--FSNKDVVSWNSMIAGYA-------------------------------QHGLAMQA 306
Query: 191 LELFR-AMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
+ELF M K G +P++ T +LS + G++ ++ + L+
Sbjct: 307 IELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVD 366
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
+ + G + A ++ + ++V W S++ + HG I E+ L L EPD
Sbjct: 367 LLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLML--EPD-- 422
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASV 337
A THV L NL ASV
Sbjct: 423 ------CAATHVQLA-------NLYASV 437
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 153 LGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAM 212
G + RQ DS R R + +NG++ E+ + + + ++ A
Sbjct: 63 FGFVQEFRQT-DSWRFRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDAY 121
Query: 213 -LSVSSRGASLNH----GKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
LS + R LN G H A++ + +G++L+ +Y +G ++NA KVF +
Sbjct: 122 GLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEM 181
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
N VSW++MI AQ + ++L+ KM +P+ T+ +LSACT G + QG
Sbjct: 182 PERN-VVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 328 RSYFNLMASVHKIEPTLSHYA-CMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
RS ++H + H + +I +Y + G L++AF+ + DV++W S+++
Sbjct: 241 RSVH--CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSMIAG- 296
Query: 387 KVYKNVDLAKIAAERLLLIEPDNSGAYSALA--NVYSAC---GKWEDAAKIRKLMNDRGV 441
Y LA A E L+ P + A+ V S+C G ++ K LM + G+
Sbjct: 297 --YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL 354
Query: 442 KKE 444
K E
Sbjct: 355 KPE 357
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS++ G + A F Q S +D+V+WNSMIAGY QHG +A+ELF M+ S
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KPD T LS+C + + G++ + + + L+ + + G ++ A
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDI 156
++E + +++ + +LL GD+
Sbjct: 380 LIENMPMKP-NSVIWGSLLFSCRVHGDV 406
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 298 bits (762), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 173/501 (34%), Positives = 287/501 (57%), Gaps = 41/501 (8%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+++ +W M+ + G + A F +M ER+IV+W +MI+G+ + +EAL LF M
Sbjct: 229 KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 63 LQD-SSLKPDKFTLASTLSACTNL--ENMNLGKQIHSYIIRTEF---DISGAVQNALISM 116
+D ++ P+ TL S AC L E LG+Q+H+ +I + D G + +L+ M
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 117 YAKTGGVEVARRVVEQS--------------EISDL--------------DAIAFTALLD 148
YA +G + A+ ++ +S + DL D +++T+++D
Sbjct: 349 YASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMID 408
Query: 149 GYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT 208
GY + GD++ A +F L ++D V WT MI G VQN L +A L M + G +P + T
Sbjct: 409 GYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSRE--DLSISVGNALITMYAKAGSIDNAQKVFNL 266
+ +LS + ++L+ GK IH ++ D + + N+L++MYAK G+I++A ++F
Sbjct: 469 YSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAK 528
Query: 267 ICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ 326
+ DTVSW+SMI+ L+ HGL ++A+ LF++ML G +P+ +T++GVLSAC+H GL+ +
Sbjct: 529 MV-QKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
G F M + I+P + HY MIDL GRAG L+EA +FI +P PD +G+LL C
Sbjct: 588 GLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLC 647
Query: 387 KV-YKNVD---LAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
+ +++ D +A+ AA RLL ++P N+ + AL NVY+ G+ + ++RK M +GVK
Sbjct: 648 GLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVK 707
Query: 443 KEQGSSWLEIQNEVHIFGAED 463
K G SW+ + ++F + D
Sbjct: 708 KTPGCSWVVVNGRANVFLSGD 728
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 194/449 (43%), Gaps = 111/449 (24%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+++ SW +M++ + GR + A+ F +M ER++V+WN+++ G ++G ++A ++F +M
Sbjct: 136 KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
P + ++ NA+I Y + G
Sbjct: 196 -------PSRDVVS---------------------------------WNAMIKGYIENDG 215
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E A+ + ++S+ + + +T+++ GY + GD+ A ++F + R++V+WTAMI G+
Sbjct: 216 MEEAKLLF--GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA 273
Query: 183 QNGLNDDALELFRAMTK--EGPRPNSFTLAAM-LSVSSRGASLNH-GKQIHASAIRS--- 235
N L +AL LF M K + PN TL ++ + G G+Q+HA I +
Sbjct: 274 WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 236 -----------------------------REDLSISVGNALITMYAKAGSIDNAQKVFNL 266
E + N +I Y K G ++ A+ +F
Sbjct: 334 TVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFER 393
Query: 267 ICWNNDTVSWSS-------------------------------MIIALAQHGLGEEAIEL 295
+ +D VSW+S MI L Q+ L EA L
Sbjct: 394 VKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASL 453
Query: 296 FEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKI-EPTLSHYACMIDLY 354
M+ G++P + TY +LS+ ++QG+ ++A +P L ++ +Y
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMY 513
Query: 355 GRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ G +++A++ M ++ D ++W S++
Sbjct: 514 AKCGAIEDAYEIFAKM-VQKDTVSWNSMI 541
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 47/333 (14%)
Query: 1 RLRSI---TSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALE 57
R++S+ SW MI ++ +G + A FQ++ ++D VTW MI+G Q+ EA
Sbjct: 393 RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAAS 452
Query: 58 LFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTE--FDISGAVQNALIS 115
L S M++ LKP T + LS+ N++ GK IH I +T +D +QN+L+S
Sbjct: 453 LLSDMVR-CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS 511
Query: 116 MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWT 175
MYAK G +E D Y +IF + +D V+W
Sbjct: 512 MYAKCGAIE-----------------------DAY----------EIFAKMVQKDTVSWN 538
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+MI+G +GL D AL LF+ M G +PNS T +LS S + G ++ +
Sbjct: 539 SMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM--- 595
Query: 236 REDLSISVG----NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEE 291
+E SI G ++I + +AG + A++ + + + D + +++ + ++
Sbjct: 596 KETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKD 655
Query: 292 AIELFEKMLALGIEPDHITYVGVLSAC-THVGL 323
A + E+ +E D + G ++ C + GL
Sbjct: 656 AEGIAERAAMRLLELDPVNAPGHVALCNVYAGL 688
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 265/492 (53%), Gaps = 38/492 (7%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + + + +I ++ G I A F + E +V+ N++IAGY+Q+ + EA+ LF M
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEM 620
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN-ALISMYAKTG 121
L + P + T A+ + AC E++ LG Q H I + F G +L+ MY +
Sbjct: 621 LT-RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN-RDVVAWTAMIVG 180
G +T A +F L + + +V WT M+ G
Sbjct: 680 G---------------------------------MTEACALFSELSSPKSIVLWTGMMSG 706
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
+ QNG ++AL+ ++ M +G P+ T +L V S +SL G+ IH+ DL
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
N LI MYAK G + + +VF+ + ++ VSW+S+I A++G E+A+++F+ M
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
I PD IT++GVL+AC+H G V GR F +M + IE + H ACM+DL GR G L
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 361 QEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVY 420
QEA FIE ++PD W SLL +C+++ + +I+AE+L+ +EP NS AY L+N+Y
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIY 946
Query: 421 SACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIW 480
++ G WE A +RK+M DRGVKK G SW++++ HIF A D H + +I ++ ++
Sbjct: 947 ASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLY 1006
Query: 481 EEIKKLGFI-PD 491
+ +K + PD
Sbjct: 1007 DLMKDDAVVNPD 1018
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 214/448 (47%), Gaps = 40/448 (8%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ L+ ++ A QF + E+D+ WNSM++ Y+ G + L F S+ ++ +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ-I 156
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P+KFT + LS C N+ G+QIH +I+ + + AL+ MYAK + ARR
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 129 VVE---------------------------------QSEISDLDAIAFTALLDGYAKLGD 155
V E + E D +AF +++ Y +LG
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 156 ITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSV 215
+ AR +F + + DVVAW MI G+ + G A+E F M K + TL ++LS
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 216 SSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVS 275
A+L+ G +HA AI+ +I VG++L++MY+K ++ A KVF + ND V
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND-VF 395
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA 335
W++MI A +G + +ELF M + G D T+ +LS C +E G + +++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 336 SVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
K+ L ++D+Y + G L++A + E M + D + W +++ S +N A
Sbjct: 456 K-KKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGSYVQDENESEA 513
Query: 396 KIAAERLLLIEPDNSGAYSALANVYSAC 423
+R+ L + GA LA+ AC
Sbjct: 514 FDLFKRMNLCGIVSDGA--CLASTLKAC 539
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 194/374 (51%), Gaps = 37/374 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I+ ++ G++ A F +MS D+V WN MI+G+ + G + A+E F +M + SS+K
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKS 325
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ TL S LSA + N++LG +H+ I+ + V ++L+SMY+K +E A +V
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV- 384
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
F++L ++ V W AMI GY NG +
Sbjct: 385 --------------------------------FEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
+ELF M G + FT ++LS + L G Q H+ I+ + ++ VGNAL+ M
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK G++++A+++F +C + D V+W+++I + Q EA +LF++M GI D
Sbjct: 473 YAKCGALEDARQIFERMC-DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC 531
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
L ACTHV + QG+ L ++ L + +ID+Y + G++++A K ++
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKC-GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 371 PIEPDVIAWGSLLS 384
P E V++ +L++
Sbjct: 591 P-EWSVVSMNALIA 603
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 156/299 (52%), Gaps = 11/299 (3%)
Query: 145 ALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRP 204
A++D YAK ++ A + FD L +DV AW +M+ Y G L F ++ + P
Sbjct: 100 AIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFP 158
Query: 205 NSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF 264
N FT + +LS +R ++ G+QIH S I+ + + G AL+ MYAK I +A++VF
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 265 NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLV 324
I + +TV W+ + + GL EEA+ +FE+M G PDH+ +V V++ +G +
Sbjct: 219 EWIV-DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGS 381
+ R F M+S P + + MI +G+ G A ++ NM ++ GS
Sbjct: 278 KDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 382 LLSSCKVYKNVDLAKIA-AERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDR 439
+LS+ + N+DL + AE + L N S+L ++YS C K E AAK+ + + ++
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 23/219 (10%)
Query: 221 SLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMI 280
+L GK +H+ ++ D +GNA++ +YAK + A+K F+ + D +W+SM+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSML 132
Query: 281 IALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKI 340
+ G + + F + I P+ T+ VLS C VE GR + S+ K+
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR---QIHCSMIKM 189
Query: 341 EPTLSHY--ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIA 398
+ Y ++D+Y + + +A + E + ++P+ + W L S Y L +
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSG---YVKAGLPE-- 243
Query: 399 AERLLLIE--------PDNSGAYSALANVYSACGKWEDA 429
E +L+ E PD+ A+ + N Y GK +DA
Sbjct: 244 -EAVLVFERMRDEGHRPDHL-AFVTVINTYIRLGKLKDA 280
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 274/528 (51%), Gaps = 70/528 (13%)
Query: 20 RIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
+ +LA+ F Q+ E ++ NS+I + Q+ +A +FS M Q L D FT L
Sbjct: 66 QTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEM-QRFGLFADNFTYPFLL 124
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV-------------- 125
AC+ + + K +H++I + V NALI Y++ GG+ V
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD 184
Query: 126 -------------------ARRVVEQSEISDLDAIAFTALLDGYA--------------- 151
ARR+ + E+ D I++ +LDGYA
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFD--EMPQRDLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 152 ----------------KLGDITPARQIFD--SLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
K GD+ AR +FD L ++VV WT +I GY + GL +A L
Sbjct: 243 PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
M G + ++ + ++L+ + L+ G +IH+ RS + V NAL+ MYAK
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK 362
Query: 254 AGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVG 313
G++ A VFN I D VSW++M+ L HG G+EAIELF +M GI PD +T++
Sbjct: 363 CGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIA 421
Query: 314 VLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE 373
VL +C H GL+++G YF M V+ + P + HY C++DL GR G L+EA K ++ MP+E
Sbjct: 422 VLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME 481
Query: 374 PDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIR 433
P+V+ WG+LL +C+++ VD+AK + L+ ++P + G YS L+N+Y+A WE A IR
Sbjct: 482 PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIR 541
Query: 434 KLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWE 481
M GV+K G+S +E+++ +H F D HP+ D+IY+M+ + E
Sbjct: 542 SKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 150/346 (43%), Gaps = 61/346 (17%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R SWN M+ + +G + A F +M +RD+++WN+M+ GY + +A ELF M
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 63 LQDSSLKPDKFTLA-STLSACTNLENMNLGKQIHSYIIRTEFD-ISGAVQNA-----LIS 115
P++ T++ ST+ M K + R FD + +N +I+
Sbjct: 243 -------PERNTVSWSTMV-------MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIA 288
Query: 116 MYAKTGGVEVARRVVEQSEISDL------------------------------------- 138
YA+ G ++ A R+V+Q S L
Sbjct: 289 GYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGS 348
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
+A ALLD YAK G++ A +F+ + +D+V+W M+ G +G +A+ELF M
Sbjct: 349 NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--ALITMYAKAGS 256
+EG RP+ T A+L + ++ G S + DL V + L+ + + G
Sbjct: 409 REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYS-MEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 257 IDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
+ A KV + + V W +++ A H + A E+ + ++ L
Sbjct: 468 LKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKL 513
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ G + A F + ++D+V+WN+M+ G HG KEA+ELFS M ++ +
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE-GI 412
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVA 126
+PDK T + L +C + ++ G + Y + +D+ V++ L+ + + G ++ A
Sbjct: 413 RPDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEA 471
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRD 170
+VV Q+ + + + + ALL ++ A+++ D+L D
Sbjct: 472 IKVV-QTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 218 RGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWS 277
+ A+LN KQ+HA IR + + LI+ + + A +VFN + N + +
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC-N 86
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASV 337
S+I A AQ+ +A +F +M G+ D+ TY +L AC+ G+S+ ++ +
Sbjct: 87 SLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GQSWLPVVKMM 139
Query: 338 H----KIEPTLSHYA--CMIDLYGRAGLL--QEAFKFIENMPIEPDVIAWGSLL 383
H K+ + Y +ID Y R G L ++A K E M E D ++W S+L
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSML 192
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 264/446 (59%), Gaps = 11/446 (2%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ LH+ G + A F ++ + + +N MI+GY +HG KE L L M S K
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRM-SYSGEKA 133
Query: 71 DKFTLASTLSAC-----TNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
D +TL+ L A T + +L + +H+ II+ + ++ + AL+ Y K+G +E
Sbjct: 134 DGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLES 193
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
AR V E + D + + T+++ GY G + A +IF++ + +D+V + AM+ G+ ++G
Sbjct: 194 ARTVFET--MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG 251
Query: 186 -LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
+++++ +M + G PN T A+++ S S G+Q+HA ++S I +G
Sbjct: 252 ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMG 311
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
++L+ MYAK G I++A++VF+ + N SW+SMI ++G EEA+ELF +M I
Sbjct: 312 SSLLDMYAKCGGINDARRVFDQMQEKN-VFSWTSMIDGYGKNGNPEEALELFTRMKEFRI 370
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
EP+++T++G LSAC+H GLV++G F M + ++P + HYAC++DL GRAG L +AF
Sbjct: 371 EPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAF 430
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDN-SGAYSALANVYSAC 423
+F MP PD W +LLSSC ++ NV+LA IAA L + D GAY AL+NVY++
Sbjct: 431 EFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASN 490
Query: 424 GKWEDAAKIRKLMNDRGVKKEQGSSW 449
KW++ +KIR++M R + K G SW
Sbjct: 491 DKWDNVSKIREVMKRRRISKTIGRSW 516
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 256/474 (54%), Gaps = 40/474 (8%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHG-----FDKEALELFSSMLQD 65
++ ++ +G + A+ F M +++VT+N+MI+G+ Q EA +LF M Q
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM-QR 351
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
L+P T + L AC+ + + G+QIH+ I + F
Sbjct: 352 RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF---------------------- 389
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
QS D +AL++ YA +G Q F S +D+ +WT+MI +VQN
Sbjct: 390 ------QS-----DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE 438
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
+ A +LFR + RP +T++ M+S + A+L+ G+QI AI+S D SV
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
+ I+MYAK+G++ A +VF + N D ++S+MI +LAQHG EA+ +FE M GI+
Sbjct: 499 SSISMYAKSGNMPLANQVF-IEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIK 557
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
P+ ++GVL AC H GLV QG YF M + ++I P H+ C++DL GR G L +A
Sbjct: 558 PNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAEN 617
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
I + + + W +LLSSC+VYK+ + K AERL+ +EP+ SG+Y L N+Y+ G
Sbjct: 618 LILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGV 677
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
A ++R+LM DRGVKKE SW+ I N+ H F D HP IY M++ +
Sbjct: 678 NSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 187/439 (42%), Gaps = 90/439 (20%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F +M ER+I+++NS+I+GY Q GF ++A+ELF ++++LK DKFT A L C +
Sbjct: 105 FDRMPERNIISFNSLISGYTQMGFYEQAMELFLEA-REANLKLDKFTYAGALGFCGERCD 163
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
++LG+ +H ++ + N LI MY+K G ++ A + ++ + + D +++ +L+
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD--ERDQVSWNSLI 221
Query: 148 DGYAKLGDITPARQIFDSLRNR-------------------------------------- 169
GY ++G + +
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 170 ----DVVAWTAMIVGYVQNGLNDDALELFRAMT--------------------------- 198
D+V TA++ Y +NG +A++LF M
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 199 ---------KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
+ G P+ T + +L S +L +G+QIHA ++ +G+ALI
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
+YA GS ++ + F D SW+SMI Q+ E A +LF ++ + I P+
Sbjct: 402 LYALMGSTEDGMQCFASTS-KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEY 460
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG---LLQEAFKF 366
T ++SAC + G A I+ S I +Y ++G L + F
Sbjct: 461 TVSLMMSACADFAALSSGEQ-IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 367 IENMPIEPDVIAWGSLLSS 385
++N PDV + +++SS
Sbjct: 520 VQN----PDVATYSAMISS 534
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 16/315 (5%)
Query: 150 YAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTL 209
Y K ++ ARQ+FD + R+++++ ++I GY Q G + A+ELF + + + FT
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
A L L+ G+ +H + + + + N LI MY+K G +D A +F+ C
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR-CD 210
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT---HVGLVEQ 326
D VSW+S+I + G EE + L KM G+ VL AC + G +E+
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS- 385
G + A + +E + ++D+Y + G L+EA K MP +V+ + +++S
Sbjct: 271 GMAIHCYTAKL-GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGF 328
Query: 386 CKVYKNVDLAKIAAERLLL------IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDR 439
++ + D A A +L + +EP S +S + SA E +I L+
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPS-TFSVVLKACSAAKTLEYGRQIHALICKN 387
Query: 440 GVKKEQ--GSSWLEI 452
+ ++ GS+ +E+
Sbjct: 388 NFQSDEFIGSALIEL 402
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 276/508 (54%), Gaps = 46/508 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+++ + G I+ A F +M E+D+VTWN +I+GY Q G ++A+ + +++ LK
Sbjct: 315 LLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM-CQLMRLEKLKY 373
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D TLA+ +SA EN+ LGK++ Y IR F+ + + ++ MYAK G + A++V
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIF--------------------DSLRNRD 170
+ + DL I + LL YA+ G A ++F LRN
Sbjct: 434 DSTVEKDL--ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 171 V-------------------VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAA 211
V ++WT M+ G VQNG +++A+ R M + G RPN+F++
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 212 MLSVSSRGASLNHGKQIHASAIRSREDLS-ISVGNALITMYAKAGSIDNAQKVFNLICWN 270
LS + ASL+ G+ IH IR+ + S +S+ +L+ MYAK G I+ A+KVF ++
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS 611
Query: 271 NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSY 330
+S ++MI A A +G +EAI L+ + +G++PD+IT VLSAC H G + Q
Sbjct: 612 ELPLS-NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEI 670
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
F + S ++P L HY M+DL AG ++A + IE MP +PD SL++SC +
Sbjct: 671 FTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQR 730
Query: 391 NVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWL 450
+L + +LL EP+NSG Y ++N Y+ G W++ K+R++M +G+KK+ G SW+
Sbjct: 731 KTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Query: 451 EIQNE--VHIFGAEDSLHPQKDEIYKMM 476
+I E VH+F A D H + +EI M+
Sbjct: 791 QITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 211/424 (49%), Gaps = 41/424 (9%)
Query: 14 LHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKF 73
++ G +D A F ++ +R+ V WN+++ GY Q+G ++EA+ LFS M + ++P +
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM-RKQGVEPTRV 275
Query: 74 TLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
T+++ LSA N+ + GKQ H+ I ++ + +L++ Y K G +E
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIE--------- 326
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
YA++ +FD + +DVV W +I GYVQ GL +DA+ +
Sbjct: 327 ----------------YAEM--------VFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
+ M E + + TLA ++S ++R +L GK++ IR + I + + ++ MYAK
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 254 AGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVG 313
GSI +A+KVF+ D + W++++ A A+ GL EA+ LF M G+ P+ IT+
Sbjct: 423 CGSIVDAKKVFDSTV-EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 314 VLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP-- 371
++ + G V++ + F M S I P L + M++ + G +EA F+ M
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Query: 372 -IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL--LIEPDNSGAYSALANVYSACGKWED 428
+ P+ + LS+C ++ + + ++ L ++L ++Y+ CG
Sbjct: 541 GLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINK 600
Query: 429 AAKI 432
A K+
Sbjct: 601 AEKV 604
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 181/367 (49%), Gaps = 41/367 (11%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
+++A F ++ R++ +W ++I + G + AL F ML++ + PD F + +
Sbjct: 123 LEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE-IFPDNFVVPNVCK 181
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
AC L+ G+ +H Y+++ S L+
Sbjct: 182 ACGALKWSRFGRGVHGYVVK-----------------------------------SGLED 206
Query: 141 IAFTA--LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
F A L D Y K G + A ++FD + +R+ VAW A++VGYVQNG N++A+ LF M
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
K+G P T++ LS S+ + GKQ HA AI + +L +G +L+ Y K G I+
Sbjct: 267 KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIE 326
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
A+ VF+ + + D V+W+ +I Q GL E+AI + + M ++ D +T ++SA
Sbjct: 327 YAEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 319 THVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIA 378
++ G+ H E + + ++D+Y + G + +A K ++ +E D+I
Sbjct: 386 ARTENLKLGKE-VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLIL 443
Query: 379 WGSLLSS 385
W +LL++
Sbjct: 444 WNTLLAA 450
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 160/338 (47%), Gaps = 37/338 (10%)
Query: 48 QHGFDKEALELFSSM-LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDIS 106
++G KEAL L + M ++ + P+ + L C +++ GKQIH+ I++
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIY--GEILQGCVYERDLSTGKQIHARILKNG---- 100
Query: 107 GAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL 166
YA+ +E T L+ YAK + A +F L
Sbjct: 101 --------DFYARNEYIE-------------------TKLVIFYAKCDALEIAEVLFSKL 133
Query: 167 RNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGK 226
R R+V +W A+I + GL + AL F M + P++F + + G+
Sbjct: 134 RVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGR 193
Query: 227 QIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQH 286
+H ++S + + V ++L MY K G +D+A KVF+ I + + V+W+++++ Q+
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI-PDRNAVAWNALMVGYVQN 252
Query: 287 GLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSH 346
G EEAI LF M G+EP +T LSA ++G VE+G+ + +A V+ +E
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS-HAIAIVNGMELDNIL 311
Query: 347 YACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
+++ Y + GL++ A + M E DV+ W ++S
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLIIS 348
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 257/470 (54%), Gaps = 35/470 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDS-SLK 69
+++L+ G A F+ M E+D+V W S+I+G ++G KEAL++F M D SLK
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 70 PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
PD + S +AC LE + G Q+H +I+T G V N +
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-----GLVLNVFVG-------------- 514
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
++L+D Y+K G A ++F S+ ++VAW +MI Y +N L +
Sbjct: 515 --------------SSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPEL 560
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
+++LF M +G P+S ++ ++L S ASL GK +H +R + NALI
Sbjct: 561 SIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALID 620
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MY K G A+ +F + + ++W+ MI HG A+ LF++M G PD +
Sbjct: 621 MYVKCGFSKYAENIFKKM-QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T++ ++SAC H G VE+G++ F M + IEP + HYA M+DL GRAGLL+EA+ FI+
Sbjct: 680 TFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKA 739
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
MPIE D W LLS+ + + NV+L ++AE+LL +EP+ Y L N+Y G +A
Sbjct: 740 MPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEA 799
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
AK+ LM ++G+ K+ G SW+E+ + ++F + S P K EI+ +++++
Sbjct: 800 AKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 189/374 (50%), Gaps = 45/374 (12%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++S++ G + A F + ++ + WN+M+A Y ++ + AL+LF M Q S L P
Sbjct: 313 LLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL-P 371
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D FTL++ +S C+ L N GK +H+ + + + +++AL+++Y+K G
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG--------- 422
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
D DA +F S+ +D+VAW ++I G +NG +A
Sbjct: 423 -----CDPDAYL-------------------VFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 191 LELFRAMTKEGP--RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
L++F M + +P+S + ++ + + +L G Q+H S I++ L++ VG++LI
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+Y+K G + A KVF + N V+W+SMI +++ L E +I+LF ML+ GI PD
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTEN-MVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 309 ITYVGVLSACTHVGLVEQGRSY--FNLMASVHKIEPTLSHYA-CMIDLYGRAGLLQEAFK 365
++ VL A + + +G+S + L + P+ +H +ID+Y + G + A
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGI----PSDTHLKNALIDMYVKCGFSKYAEN 633
Query: 366 FIENMPIEPDVIAW 379
+ M +I W
Sbjct: 634 IFKKMQ-HKSLITW 646
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 182/389 (46%), Gaps = 50/389 (12%)
Query: 11 MISLHMNSGRIDLALAQF-------QQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++++++ G +D A+ F +S RD+ WNSMI GY + KE + F ML
Sbjct: 101 LVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRML 160
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNL--GKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
++PD F+L+ +S N GKQIH +++R D ++ ALI MY K G
Sbjct: 161 V-FGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFG 219
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
A RV EI D +VV W MIVG+
Sbjct: 220 LSIDAWRVF--VEIED------------------------------KSNVVLWNVMIVGF 247
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
+G+ + +L+L+ + S + L S+ + G+QIH ++
Sbjct: 248 GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP 307
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
V +L++MY+K G + A+ VF+ + + W++M+ A A++ G A++LF M
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI-WNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK--IEPTLSHYACMIDLYGRAGL 359
+ PD T V+S C+ +GL G+S + A + K I+ T + + ++ LY + G
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKS---VHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSS-CK 387
+A+ ++M E D++AWGSL+S CK
Sbjct: 424 DPDAYLVFKSME-EKDMVAWGSLISGLCK 451
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 186/397 (46%), Gaps = 47/397 (11%)
Query: 33 ERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGK 92
+ ++V WN MI G+ G + +L+L+ + +++S+K + L AC+ EN G+
Sbjct: 234 KSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFGR 292
Query: 93 QIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAK 152
QIH +++ + N D T+LL Y+K
Sbjct: 293 QIHCDVVKM------GLHN---------------------------DPYVCTSLLSMYSK 319
Query: 153 LGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAM 212
G + A +F + ++ + W AM+ Y +N AL+LF M ++ P+SFTL+ +
Sbjct: 320 CGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNV 379
Query: 213 LSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNND 272
+S S N+GK +HA + + ++ +AL+T+Y+K G +A VF + D
Sbjct: 380 ISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM-EEKD 438
Query: 273 TVSWSSMIIALAQHGLGEEAIELFEKML--ALGIEPDHITYVGVLSACTHVGLVEQGRSY 330
V+W S+I L ++G +EA+++F M ++PD V +AC +E R
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG---LEALRFG 495
Query: 331 FNLMASVHKIEPTLSHY--ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV 388
+ S+ K L+ + + +IDLY + GL + A K +M E +++AW S++ SC
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYS 553
Query: 389 YKNVDLAKIAAERLLL---IEPDNSGAYSALANVYSA 422
N+ I L+L I PD+ S L + S
Sbjct: 554 RNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISST 590
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 198/483 (40%), Gaps = 85/483 (17%)
Query: 40 NSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYII 99
NS I Q G +AL L+S S FT S L AC+ L N++ GK IH ++
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 100 RTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPA 159
+ + +L++MY K G ++ A +V DG++
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQV-----------------FDGWS-------- 122
Query: 160 RQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRG 219
Q + RDV W +MI GY + + + FR M G RP++F+L+ ++SV +
Sbjct: 123 -QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 220 ASLNH--GKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWS 277
+ GKQIH +R+ D + ALI MY K G +A +VF I ++ V W+
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 278 SMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT-----------HVGLVEQ 326
MI+ G+ E +++L+ ++ ++ G L AC+ H +V+
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 327 G--------RSYFNLMASVHKIEPTLSHYACMIDL----------------YGRAGLLQE 362
G S ++ + + + ++C++D YG + L +
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL--D 359
Query: 363 AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAK-IAAERLLLIEPDNSGAYSALANVYS 421
F F+ + PD +++S C V + K + AE S SAL +YS
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 422 ACGKWEDAAKIRKLMNDR----------GVKKEQGSSWLEIQNEVHIFG----AEDSLHP 467
CG DA + K M ++ G+ K + + + +FG +DSL P
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNG-----KFKEALKVFGDMKDDDDSLKP 474
Query: 468 QKD 470
D
Sbjct: 475 DSD 477
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I +++ G A F++M + ++TWN MI GY HG AL LF M + +
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM-KKAGE 674
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNA--LISMYAKTGGVEVA 126
PD T S +SAC + + GK I + ++ ++ I +++ ++ + + G +E A
Sbjct: 675 SPDDVTFLSLISACNHSGFVEEGKNIFEF-MKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
Query: 127 RRVVEQSEISDLDAIAFTALLDGY-----AKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
++ I + D+ + LL +LG I A ++ R + +I Y
Sbjct: 734 YSFIKAMPI-EADSSIWLCLLSASRTHHNVELG-ILSAEKLLRMEPERG-STYVQLINLY 790
Query: 182 VQNGLNDDALELFRAMTKEG 201
++ GL ++A +L M ++G
Sbjct: 791 MEAGLKNEAAKLLGLMKEKG 810
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 251/445 (56%), Gaps = 5/445 (1%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDS 66
S + +IS + N GR++ + F + S R ++ WNSMI+GY + EAL LF+ M ++
Sbjct: 255 SLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET 314
Query: 67 SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
+ D TLA+ ++AC L + GKQ+H + + V + L+ MY+K G A
Sbjct: 315 --REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEA 372
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
++ SE+ D I +++ Y G I A+++F+ + N+ +++W +M G+ QNG
Sbjct: 373 CKLF--SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+ LE F M K + +L++++S + +SL G+Q+ A A D V ++
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
LI +Y K G +++ ++VF+ + +D V W+SMI A +G G EAI+LF+KM GI P
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTMV-KSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRP 549
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
IT++ VL+AC + GLVE+GR F M H P H++CM+DL RAG ++EA
Sbjct: 550 TQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINL 609
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKW 426
+E MP + D W S+L C + K AAE+++ +EP+NS AY L+ +++ G W
Sbjct: 610 VEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDW 669
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLE 451
E +A +RKLM + V K GSSW +
Sbjct: 670 ESSALVRKLMRENNVTKNPGSSWTD 694
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 210/413 (50%), Gaps = 41/413 (9%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R SWN+++S +G + +A F M E+D+VT NS++ GY +G+ +EAL LF +
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ D TL + L AC LE + GKQIH+ I+ + + ++L+++YAK G
Sbjct: 182 ----NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ +A ++EQ I + D + +AL+ GYA G + +R +FD NR V+ W +MI GY+
Sbjct: 238 LRMASYMLEQ--IREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI 295
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
N + +AL LF M E R +S TLAA+++ L GKQ+H A + I
Sbjct: 296 ANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIV 354
Query: 243 VGNALITMYAKAGS-------------------------------IDNAQKVFNLICWNN 271
V + L+ MY+K GS ID+A++VF I N
Sbjct: 355 VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERI-ENK 413
Query: 272 DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYF 331
+SW+SM +Q+G E +E F +M L + D ++ V+SAC + +E G F
Sbjct: 414 SLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF 473
Query: 332 NLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
A++ ++ + +IDLY + G ++ + + M ++ D + W S++S
Sbjct: 474 -ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMIS 524
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 191/434 (44%), Gaps = 84/434 (19%)
Query: 58 LFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISM 116
L SS LQ + ++ + L +C++ L +Q + +++ F S V N L+ M
Sbjct: 13 LSSSFLQAMEVDCRRYYV-RLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQM 71
Query: 117 YAKTGGVEVARRVVEQSE-----------------------------ISDLDAIAFTALL 147
Y+++G + +AR + ++ + + D ++ ++
Sbjct: 72 YSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVV 131
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
G+AK G+++ AR++F+++ +DVV +++ GY+ NG ++AL LF+ + ++
Sbjct: 132 SGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAI 188
Query: 208 TLAAMLSVSSRGASLNHGKQIHAS----------------------------------AI 233
TL +L + +L GKQIHA I
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAI 293
R +D S+S ALI+ YA G ++ ++ +F+ N + W+SMI + + EA+
Sbjct: 249 REPDDHSLS---ALISGYANCGRVNESRGLFDRKS-NRCVILWNSMISGYIANNMKMEAL 304
Query: 294 ELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDL 353
LF +M E D T V++AC +G +E G+ + A + + + ++D+
Sbjct: 305 VLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQ-MHCHACKFGLIDDIVVASTLLDM 362
Query: 354 YGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY---KNVDLAKIAAERLLLIEPDNS 410
Y + G EA K + D I S++ KVY +D AK ER IE +
Sbjct: 363 YSKCGSPMEACKLFSEVE-SYDTILLNSMI---KVYFSCGRIDDAKRVFER---IENKSL 415
Query: 411 GAYSALANVYSACG 424
+++++ N +S G
Sbjct: 416 ISWNSMTNGFSQNG 429
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/570 (29%), Positives = 298/570 (52%), Gaps = 49/570 (8%)
Query: 9 NIMISLHMNSGRIDLALAQ-FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
N ++ ++M ++ ++ F M ++V+W ++I G HGF ++ L M++
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK-RE 422
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
++P+ TL+ L AC+ L ++ +IH+Y++R D V N+L+ YA + V+ A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
V+ S++ RD + +T+++ + + G +
Sbjct: 483 NVIR---------------------------------SMKRRDNITYTSLVTRFNELGKH 509
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+ AL + M +G R + +L +S S+ +L GK +H +++S + SV N+L
Sbjct: 510 EMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSL 569
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ MY+K GS+++A+KVF I D VSW+ ++ LA +G A+ FE+M EPD
Sbjct: 570 VDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPD 628
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
+T++ +LSAC++ L + G YF +M ++ IEP + HY ++ + GRAG L+EA +
Sbjct: 629 SVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVV 688
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
E M ++P+ + + +LL +C+ N+ L + A + L + P + Y LA++Y GK E
Sbjct: 689 ETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPE 748
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQK-DEIYKMMDKIWEEIKKL 486
A K R LM ++ + K+ G S +E+Q +VH F +ED K + IY ++ I EEIK+
Sbjct: 749 LAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRF 808
Query: 487 GFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAI 546
G ++ +HS K A+ +G I + ++KN +C DCH +
Sbjct: 809 G------------SPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFV 856
Query: 547 KFISKLMGREIIVRDVTRFHHFKDGFCSCR 576
+++L+ ++I VRD + H FK+G CSC+
Sbjct: 857 SILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 189/401 (47%), Gaps = 38/401 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ + +++ A+ E+D+ W S+++G+ ++ KEA+ F M + L+P
Sbjct: 265 LVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM-RSLGLQP 323
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ FT ++ LS C+ + +++ GKQIHS I+ F+ S V NAL+ MY K EV
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV----- 378
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
A ++F ++ + +VV+WT +I+G V +G D
Sbjct: 379 ---------------------------EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDC 411
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L M K PN TL+ +L S+ + +IHA +R D + VGN+L+
Sbjct: 412 FGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDA 471
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YA + +D A V + D ++++S++ + G E A+ + M GI D ++
Sbjct: 472 YASSRKVDYAWNVIRSM-KRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLS 530
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
G +SA ++G +E G+ + + + S ++D+Y + G L++A K E +
Sbjct: 531 LPGFISASANLGALETGK-HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI 589
Query: 371 PIEPDVIAWGSLLSSCKVYKNVDLAKIAAE--RLLLIEPDN 409
PDV++W L+S + A A E R+ EPD+
Sbjct: 590 AT-PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDS 629
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 37/375 (9%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++SL++ + I A F +MS R + W MI+ + + AL LF M+ S
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMA-SGT 120
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P++FT +S + +C L +++ G ++H +I+T F+ + V ++L
Sbjct: 121 HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSL--------------- 165
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
SDL Y+K G A ++F SL+N D ++WT MI V
Sbjct: 166 -------SDL-----------YSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+AL+ + M K G PN FT +L SS L GK IH++ I L++ + +L+
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSF-LGLEFGKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
Y++ +++A +V N D W+S++ ++ +EA+ F +M +LG++P++
Sbjct: 267 DFYSQFSKMEDAVRVLN-SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
TY +LS C+ V ++ G+ + V E + ++D+Y + + +
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 369 NMPIEPDVIAWGSLL 383
+ P+V++W +L+
Sbjct: 385 GAMVSPNVVSWTTLI 399
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 207/459 (45%), Gaps = 81/459 (17%)
Query: 14 LHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKF 73
L+ G+ A F + D ++W MI+ +EAL+ +S M++ + + P++F
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK-AGVPPNEF 226
Query: 74 TLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
T L A + L + GK IHS II + G N ++
Sbjct: 227 TFVKLLGASSFL-GLEFGKTIHSNII-----VRGIPLNVVLK------------------ 262
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
T+L+D Y++ + A ++ +S +DV WT+++ G+V+N +A+
Sbjct: 263 ----------TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
F M G +PN+FT +A+LS+ S SL+ GKQIH+ I+ + S VGNAL+ MY K
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 254 AGSID-NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYV 312
+ + A +VF + N VSW+++I+ L HG ++ L +M+ +EP+ +T
Sbjct: 373 CSASEVEASRVFGAMVSPN-VVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431
Query: 313 GVLSACT---HV----------------GLVEQGRSYFNLMASVHKIEPTLS-------- 345
GVL AC+ HV G + G S + AS K++ +
Sbjct: 432 GVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR 491
Query: 346 ---HYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSCKVYKNVDLAKIAA 399
Y ++ + G + A I M I D ++ +S+ + +L +
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA-----SANLGALET 546
Query: 400 ERLL---LIEPDNSGAYS---ALANVYSACGKWEDAAKI 432
+ L ++ SGA S +L ++YS CG EDA K+
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 150/282 (53%), Gaps = 13/282 (4%)
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
LL Y K I AR++FD + +R V AWT MI + ++ AL LF M G PN
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
FT ++++ + +++G ++H S I++ + + VG++L +Y+K G A ++F+
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
+ N DT+SW+ MI +L EA++ + +M+ G+ P+ T+V +L A + +GL E
Sbjct: 184 SL-QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-E 241
Query: 326 QGRS-YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
G++ + N++ V I + ++D Y + +++A + + N E DV W S++S
Sbjct: 242 FGKTIHSNII--VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL-NSSGEQDVFLWTSVVS 298
Query: 385 SCKVYKNVDLAKIAAE----RLLLIEPDNSGAYSALANVYSA 422
+N+ + R L ++P+N YSA+ ++ SA
Sbjct: 299 G--FVRNLRAKEAVGTFLEMRSLGLQPNNF-TYSAILSLCSA 337
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 267/448 (59%), Gaps = 16/448 (3%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ +WN+M++ + +G I+ A F Q++E+DIV+W +MI G + EAL ++ M
Sbjct: 491 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 550
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
L+ +KP + + LSA + G Q+H I++ FD +Q +I YA +
Sbjct: 551 LR-CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 609
Query: 123 VEVARRVVEQSEISDLDAIAF-TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+++A ++Q E S D IA AL+ G+ K G + AR++FD ++D+ +W AMI GY
Sbjct: 610 IKLA---LQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGY 666
Query: 182 VQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHA----SAIRSR 236
Q+ AL LFR M +P++ T+ ++ S S SL GK+ H S I
Sbjct: 667 AQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPN 726
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLI-CWNNDTVS-WSSMIIALAQHGLGEEAIE 294
++L+ A+I MYAK GSI+ A +F+ ++ T+S W+++I A HG + A++
Sbjct: 727 DNLTA----AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALD 782
Query: 295 LFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLY 354
L+ + +L I+P+ IT+VGVLSAC H GLVE G++YF M S H IEP + HY CM+DL
Sbjct: 783 LYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLL 842
Query: 355 GRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYS 414
G+AG L+EA + I+ MP++ DV+ WG LLS+ + + NV++A++AA L I+P + G
Sbjct: 843 GKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKV 902
Query: 415 ALANVYSACGKWEDAAKIRKLMNDRGVK 442
L+NVY+ G+WED A +R+ M R V+
Sbjct: 903 MLSNVYADAGRWEDVALVREEMRTRDVE 930
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 239/502 (47%), Gaps = 78/502 (15%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDS 66
S+NIM+ ++ S R+ AL F M ER V++ ++I GY Q+ EA+ELF M ++
Sbjct: 363 SFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM-RNL 421
Query: 67 SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
+ ++ TLA+ +SAC++L + + + S I+ + + V L+ MY ++ A
Sbjct: 422 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 481
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
R++ + E+ + + + + +L+GY+K G I A ++FD + +D+V+W MI G ++
Sbjct: 482 RKLFD--EMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 539
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL------- 239
D+AL + M + G +P+ + +LS S+R + G Q+H + ++ D
Sbjct: 540 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQAT 599
Query: 240 ------------------------SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVS 275
I+ NALI + K G ++ A++VF+ + D S
Sbjct: 600 IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT-HDKDIFS 658
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
W++MI AQ + A+ LF +M++ ++PD IT V V SA + +G +E+G+ + +
Sbjct: 659 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 718
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF---------------------------- 366
+ I P + A +ID+Y + G ++ A
Sbjct: 719 -NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHA 777
Query: 367 ---------IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL---IEPDNSGAYS 414
++++PI+P+ I + +LS+C V+L K E + IEPD Y
Sbjct: 778 KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIK-HYG 836
Query: 415 ALANVYSACGKWEDAAKIRKLM 436
+ ++ G+ E+A ++ K M
Sbjct: 837 CMVDLLGKAGRLEEAKEMIKKM 858
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 32/273 (11%)
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSE 134
L S L +C + ++ G+QIH ++++ D +G + N++++MYAK + A V
Sbjct: 298 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH- 356
Query: 135 ISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
+ LD+ +F ++DGY + + A ++FD + R V++T +I GY QN +A+ELF
Sbjct: 357 -AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELF 415
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
R M G N TLA ++S S + + + + AI+ + + + V L+ MY
Sbjct: 416 REMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 475
Query: 255 GSIDNAQKVF------NLICWN------------------------NDTVSWSSMIIALA 284
+ +A+K+F NL+ WN D VSW +MI
Sbjct: 476 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCL 535
Query: 285 QHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
+ +EA+ + +ML G++P + V +LSA
Sbjct: 536 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 568
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 64/262 (24%)
Query: 205 NSFTLAAMLSVSSRGASLNH---GKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQ 261
+S T A++S AS N G+QIH ++S D + + N+++ MYAK + +A+
Sbjct: 291 SSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAE 350
Query: 262 KVF-----------NLIC---------WN----------NDTVSWSSMIIALAQHGLGEE 291
VF N++ W+ VS++++I AQ+ E
Sbjct: 351 SVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSE 410
Query: 292 AIELFEKMLALGIEPDHITYVGVLSACTHVG--------------LVEQGRSYFN----- 332
A+ELF +M LGI + +T V+SAC+H+G L +GR + +
Sbjct: 411 AMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 470
Query: 333 ------LMASVHKI-----EPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGS 381
+ K+ E L + M++ Y +AGL+++A + + + E D+++WG+
Sbjct: 471 MYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI-TEKDIVSWGT 529
Query: 382 LLSSCKVYKNVDLAKIAAERLL 403
++ C +D A + +L
Sbjct: 530 MIDGCLRKNQLDEALVYYTEML 551
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 277/486 (56%), Gaps = 15/486 (3%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ SWN MI + SGRID AL F +M ER+IV+WNSM+ Q G EA+ LF M
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
P + ++ T +N + + + E +I NA+I+ YA+
Sbjct: 198 -------PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS--WNAMITGYAQNNR 248
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
++ A ++ + + + D ++ ++ G+ + ++ A +FD + ++V++WT MI GYV
Sbjct: 249 IDEADQLFQV--MPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYV 306
Query: 183 QNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
+N N++AL +F M ++G +PN T ++LS S A L G+QIH +S +
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 242 SVGNALITMYAKAGSIDNAQKVFN--LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
V +AL+ MY+K+G + A+K+F+ L+C D +SW+SMI A HG G+EAIE++ +M
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVC-QRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
G +P +TY+ +L AC+H GLVE+G +F + + HY C++DL GRAG
Sbjct: 426 RKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGR 485
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANV 419
L++ FI +G++LS+C V+ V +AK +++L D++G Y ++N+
Sbjct: 486 LKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNI 545
Query: 420 YSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
Y+A GK E+AA++R M ++G+KK+ G SW+++ + H+F D HPQ + + ++ +
Sbjct: 546 YAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Query: 480 WEEIKK 485
+++K
Sbjct: 606 RNKMRK 611
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 18/239 (7%)
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
L+ K+G I AR++FD L RDVV WT +I GY++ G +A ELF + R N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF---DRVDSRKN 108
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
T AM+S R L+ + + + + ++ N +I YA++G ID A ++F+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEML----FQEMPERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
+ N VSW+SM+ AL Q G +EA+ LFE+M D +++ ++ G V+
Sbjct: 165 EMPERN-IVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVDGLAKNGKVD 219
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
+ R F+ M E + + MI Y + + EA + + MP E D +W ++++
Sbjct: 220 EARRLFDCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMIT 272
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 264/509 (51%), Gaps = 43/509 (8%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS-----LKPDKF 73
G + A+ F+ + + WN++I G+ A + SMLQ SS + D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 74 TLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
T + TL AC + Q+H I R
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSA---------------------------- 142
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
D++ T LLD Y+K GD+ A ++FD + RDV +W A+I G V +A+EL
Sbjct: 143 -----DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMEL 197
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
++ M EG R + T+ A L S + G+ I + ++ V NA I MY+K
Sbjct: 198 YKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI----FHGYSNDNVIVSNAAIDMYSK 253
Query: 254 AGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVG 313
G +D A +VF V+W++MI A HG A+E+F+K+ GI+PD ++Y+
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 314 VLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE 373
L+AC H GLVE G S FN MA +E + HY C++DL RAG L+EA I +M +
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI 372
Query: 374 PDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIR 433
PD + W SLL + ++Y +V++A+IA+ + + +N G + L+NVY+A G+W+D ++R
Sbjct: 373 PDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVR 432
Query: 434 KLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTD 493
M + VKK G S++E + +H F D H Q EIY+ +D+I +I++ G++ T
Sbjct: 433 DDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTG 492
Query: 494 SVLHDLEIEVKDKLLRYHSEKLAIAFGII 522
VLHD+ E K+ L YHSEKLA+A+G++
Sbjct: 493 LVLHDIGEEEKENALCYHSEKLAVAYGLM 521
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ + +G + A F +M RD+ +WN++IAG EA+EL+ M + ++
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRM-ETEGIRR 208
Query: 71 DKFTLASTLSACTNLENMNLGKQI-HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
+ T+ + L AC++L ++ G+ I H Y + + V NA I MY+K G V+ A +V
Sbjct: 209 SEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQV 263
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
EQ FT + VV W MI G+ +G
Sbjct: 264 FEQ----------FTG----------------------KKSVVTWNTMITGFAVHGEAHR 291
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
ALE+F + G +P+ + A L+ + +G + + + ++ ++
Sbjct: 292 ALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVD 351
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIA 282
+ ++AG + A + + D V W S++ A
Sbjct: 352 LLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 252/480 (52%), Gaps = 49/480 (10%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAST 78
G I A F +M E+++V W SMI GY
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGY-------------------------------- 69
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
L N +L + + E DI + N +IS Y + G + AR + +Q D+
Sbjct: 70 ------LLNKDLVSARRYFDLSPERDI--VLWNTMISGYIEMGNMLEARSLFDQMPCRDV 121
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
+++ +L+GYA +GD+ ++FD + R+V +W +I GY QNG + L F+ M
Sbjct: 122 --MSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 199 KEGPR-PNSFTLAAMLSVSSRGASLNHGKQIHA-SAIRSREDLSISVGNALITMYAKAGS 256
EG PN T+ +LS ++ + + GK +H + ++V NALI MY K G+
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 257 IDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLS 316
I+ A +VF I D +SW++MI LA HG G EA+ LF +M GI PD +T+VGVL
Sbjct: 240 IEIAMEVFKGIK-RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 317 ACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDV 376
AC H+GLVE G +YFN M + I P + H C++DL RAG L +A +FI MP++ D
Sbjct: 299 ACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADA 358
Query: 377 IAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLM 436
+ W +LL + KVYK VD+ ++A E L+ +EP N + L+N+Y G+++DAA+++ M
Sbjct: 359 VIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAM 418
Query: 437 NDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVL 496
D G KKE G SW+E + + F + HP+ +E + +I E+K + D + +
Sbjct: 419 RDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEE----LQRILRELKSFNILRDEEHFM 474
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 42/304 (13%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + SWN ++ + N G ++ F M ER++ +WN +I GY Q+G E L F M
Sbjct: 119 RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRM 178
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSY---IIRTEFDISGAVQNALISMYAK 119
+ + S+ P+ T+ LSAC L + GK +H Y + + D++ V+NALI MY K
Sbjct: 179 VDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVN--VKNALIDMYGK 236
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIV 179
G +E+ A ++F ++ RD+++W MI
Sbjct: 237 CGAIEI---------------------------------AMEVFKGIKRRDLISWNTMIN 263
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
G +G +AL LF M G P+ T +L + G S +
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIM 323
Query: 240 -SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIA---LAQHGLGEEAIEL 295
I ++ + ++AG + A + N + D V W++++ A + +GE A+E
Sbjct: 324 PEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEE 383
Query: 296 FEKM 299
K+
Sbjct: 384 LIKL 387
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 33/245 (13%)
Query: 153 LGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAM 212
+G I A ++F + ++VV WT+MI GY+ LN D + R P + M
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYL---LNKDLVSARRYFDLS-PERDIVLWNTM 96
Query: 213 LSVSSRGASLNHGKQIHASAIRSREDL-SISVGNALITMYAKAGSIDNAQKVFNLICWNN 271
+S + G + A ++ + + N ++ YA G ++ ++VF+ + N
Sbjct: 97 IS-----GYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 272 DTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSACTHVGLVEQGRSY 330
SW+ +I AQ+G E + F++M+ G + P+ T VLSAC +G + G+
Sbjct: 152 -VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK-- 208
Query: 331 FNLMASVHKIEPTLSHYA-------CMIDLYGRAGLLQ---EAFKFIENMPIEPDVIAWG 380
VHK TL + +ID+YG+ G ++ E FK I+ D+I+W
Sbjct: 209 -----WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK----RRDLISWN 259
Query: 381 SLLSS 385
++++
Sbjct: 260 TMING 264
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 246/427 (57%), Gaps = 43/427 (10%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F +M E D++ W ++++ ++++ +EAL LF +M + L PD T + L+AC NL
Sbjct: 221 FDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRR 280
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+ GK+IH +I T G+ + VVE S LL
Sbjct: 281 LKQGKEIHGKLI--------------------TNGIG-SNVVVESS------------LL 307
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
D Y K G + ARQ+F+ + ++ V+W+A++ GY QNG ++ A+E+FR M ++ + +
Sbjct: 308 DMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLY 363
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
+L + A++ GK+IH +R ++ V +ALI +Y K+G ID+A +V++ +
Sbjct: 364 CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
N ++W++M+ ALAQ+G GEEA+ F M+ GI+PD+I+++ +L+AC H G+V++G
Sbjct: 424 SIRN-MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCK 387
R+YF LMA + I+P HY+CMIDL GRAGL +EA +E D WG LL C
Sbjct: 483 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542
Query: 388 VYKNVDLAKIA---AERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
N D +++A A+R++ +EP +Y L+N+Y A G+ DA IRKLM RGV K
Sbjct: 543 A--NADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT 600
Query: 445 QGSSWLE 451
G SW++
Sbjct: 601 VGQSWID 607
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 169/353 (47%), Gaps = 42/353 (11%)
Query: 34 RDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQ 93
+D ++W SM++GY +ALE+F M+ L ++FTL+S + AC+ L + LG+
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMV-SFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 94 IHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKL 153
H +I F+ + + + L +Y ARRV + E+ + D I +TA+L ++K
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD--EMPEPDVICWTAVLSAFSK- 241
Query: 154 GDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTK-EGPRPNSFTLAAM 212
N L ++AL LF AM + +G P+ T +
Sbjct: 242 ------------------------------NDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 213 LSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNND 272
L+ L GK+IH I + ++ V ++L+ MY K GS+ A++VFN + N
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN- 330
Query: 273 TVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFN 332
+VSWS+++ Q+G E+AIE+F +M E D + VL AC + V G+
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHG 386
Query: 333 LMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
+ A +IDLYG++G + A + M I ++I W ++LS+
Sbjct: 387 QYVRRGCFGNVIVESA-LIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 153/331 (46%), Gaps = 37/331 (11%)
Query: 54 EALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNAL 113
EA+ + +S S + AS L C + + G Q H++++++ + V N+L
Sbjct: 44 EAIRILNST-HSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSL 102
Query: 114 ISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVA 173
+S+Y K G + R++FD +D ++
Sbjct: 103 LSLYFKLGP--------------------------------GMRETRRVFDGRFVKDAIS 130
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
WT+M+ GYV + ALE+F M G N FTL++ + S + G+ H I
Sbjct: 131 WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVI 190
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAI 293
+ + + + L +Y +A++VF+ + D + W++++ A +++ L EEA+
Sbjct: 191 THGFEWNHFISSTLAYLYGVNREPVDARRVFDEM-PEPDVICWTAVLSAFSKNDLYEEAL 249
Query: 294 ELFEKM-LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMID 352
LF M G+ PD T+ VL+AC ++ ++QG+ + + + I + + ++D
Sbjct: 250 GLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT-NGIGSNVVVESSLLD 308
Query: 353 LYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+YG+ G ++EA + M + + ++W +LL
Sbjct: 309 MYGKCGSVREARQVFNGMS-KKNSVSWSALL 338
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 139/307 (45%), Gaps = 47/307 (15%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G + A F MS+++ V+W++++ GY Q+G ++A+E+F M +
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----- 360
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D + + L AC L + LGK+IH +R + V++ALI +Y K+G ++ A RV
Sbjct: 361 DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV- 419
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
Y+K+ S+RN ++ W AM+ QNG ++A
Sbjct: 420 -------------------YSKM-----------SIRN--MITWNAMLSALAQNGRGEEA 447
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG----NA 246
+ F M K+G +P+ + A+L+ ++ G+ +S I G +
Sbjct: 448 VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKS---YGIKPGTEHYSC 504
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
+I + +AG + A+ + ND W ++ A + E K + + +EP
Sbjct: 505 MIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRM-MELEP 563
Query: 307 D-HITYV 312
H++YV
Sbjct: 564 KYHMSYV 570
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 21/224 (9%)
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAG-SIDNAQKVFNLIC 268
A++L ++ S HG Q HA ++S + +VGN+L+++Y K G + ++VF+
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR- 123
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR 328
+ D +SW+SM+ +A+E+F +M++ G++ + T + AC+ +G V GR
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 329 SYFNLMAS-----VHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ ++ + H I TL++ LYG +A + + MP EPDVI W ++L
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAY------LYGVNREPVDARRVFDEMP-EPDVICWTAVL 236
Query: 384 SSCK---VYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
S+ +Y+ A R + PD S V +ACG
Sbjct: 237 SAFSKNDLYEEALGLFYAMHRGKGLVPDG----STFGTVLTACG 276
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I L+ SG ID A + +MS R+++TWN+M++ Q+G +EA+ F+ M++ +KP
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKK-GIKP 461
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVARR 128
D + + L+AC + ++ G+ + ++ + I ++ +I + + G E A
Sbjct: 462 DYISFIAILTACGHTGMVDEGRN-YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAEN 520
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITP-----ARQIFDSLRNRDVVAWTAMIVGYVQ 183
++E++E + DA + LL A D + A+++ + L + +++ + Y
Sbjct: 521 LLERAECRN-DASLWGVLLGPCAANADASRVAERIAKRMME-LEPKYHMSYVLLSNMYKA 578
Query: 184 NGLNDDALELFRAMTKEG 201
G + DAL + + M + G
Sbjct: 579 IGRHGDALNIRKLMVRRG 596
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 274/475 (57%), Gaps = 14/475 (2%)
Query: 25 LAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTN 84
+ + Q + V+W S I ++G EA + FS M + ++P+ T + LS C +
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTL-AGVEPNHITFIALLSGCGD 83
Query: 85 LENMN--LGKQIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVARRVVEQSEISDLDAI 141
+ + LG +H Y + D + V A+I MY+K G + AR V + E D +++
Sbjct: 84 FTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME--DKNSV 141
Query: 142 AFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEG 201
+ ++DGY + G + A ++FD + RD+++WTAMI G+V+ G ++AL FR M G
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 202 PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQ 261
+P+ + A L+ + +L+ G +H + ++ V N+LI +Y + G ++ A+
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 262 KVFNLICWNND---TVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
+VF +N + VSW+S+I+ A +G E++ F KM G +PD +T+ G L+AC
Sbjct: 262 QVF----YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC 317
Query: 319 THVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIA 378
+HVGLVE+G YF +M ++I P + HY C++DLY RAG L++A K +++MP++P+ +
Sbjct: 318 SHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVV 377
Query: 379 WGSLLSSCKVY-KNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMN 437
GSLL++C + N+ LA+ + L + + Y L+N+Y+A GKWE A+K+R+ M
Sbjct: 378 IGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMK 437
Query: 438 DRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDT 492
G+KK+ G S +EI + +H+F A D+ H + I ++++ I +++ G + +T
Sbjct: 438 GLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 156/320 (48%), Gaps = 44/320 (13%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
++ +WN MI +M SG++D A F +M ERD+++W +MI G+ + G+ +EAL F M
Sbjct: 138 KNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM 197
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
Q S +KPD + + L+ACTNL ++ G +H Y++ +F + V N+LI +Y + G
Sbjct: 198 -QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
VE A RQ+F ++ R VV+W ++IVG+
Sbjct: 257 VEFA---------------------------------RQVFYNMEKRTVVSWNSVIVGFA 283
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHG-KQIHASAIRSREDLSI 241
NG ++L FR M ++G +P++ T L+ S + G + R I
Sbjct: 284 ANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRI 343
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
L+ +Y++AG +++A K+ + + V S++ A + HG I L E+++
Sbjct: 344 EHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG---NNIVLAERLM- 399
Query: 302 LGIEPDHITYVGVLSACTHV 321
H+T + V S +V
Sbjct: 400 -----KHLTDLNVKSHSNYV 414
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 158 PARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSS 217
P Q + + V+WT+ I +NG +A + F MT G PN T A+LS
Sbjct: 23 PKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCG 82
Query: 218 RGASLNH--GKQIHASAIRSREDLS-ISVGNALITMYAKAGSIDNAQKVF------NLIC 268
S + G +H A + D + + VG A+I MY+K G A+ VF N +
Sbjct: 83 DFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVT 142
Query: 269 WNN------------------------DTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
WN D +SW++MI + G EEA+ F +M G+
Sbjct: 143 WNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGV 202
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
+PD++ + L+ACT++G + G + S + + +IDLY R G ++ A
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLS-QDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 365 KFIENMPIEPDVIAWGSLL 383
+ NM + V++W S++
Sbjct: 262 QVFYNME-KRTVVSWNSVI 279
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 254/452 (56%), Gaps = 10/452 (2%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I L++ G + L+ F +M +RD V++NSMI GY + G A ELF M +
Sbjct: 153 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMK- 211
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
L S S + + G I S + + N++I Y K G +E A+
Sbjct: 212 -----NLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKG 266
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ + + D + + ++DGYAKLG + A+ +FD + +RDVVA+ +M+ GYVQN +
Sbjct: 267 LFDV--MPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHM 324
Query: 189 DALELFRAMTKEGPR-PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+ALE+F M KE P+ TL +L ++ L+ +H + + L +G AL
Sbjct: 325 EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVAL 384
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
I MY+K GSI +A VF I N W++MI LA HGLGE A ++ ++ L ++PD
Sbjct: 385 IDMYSKCGSIQHAMLVFEGI-ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPD 443
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
IT+VGVL+AC+H GLV++G F LM HKIEP L HY CM+D+ R+G ++ A I
Sbjct: 444 DITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLI 503
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
E MP+EP+ + W + L++C +K + ++ A+ L+L N +Y L+N+Y++ G W+
Sbjct: 504 EEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWK 563
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIF 459
D ++R +M +R ++K G SW+E+ VH F
Sbjct: 564 DVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 595
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 196/404 (48%), Gaps = 42/404 (10%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D WN++I ++ HG D L ++ ++ + DKF+L+ L AC+ L + G QI
Sbjct: 78 DPFLWNAVIKSHS-HGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 136
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
H ++ +T +QN LI +Y K G + ++R++ ++ + D++++ +++DGY K G
Sbjct: 137 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDR--MPKRDSVSYNSMIDGYVKCG 194
Query: 155 DITPARQIFD--SLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAM 212
I AR++FD + +++++W +MI GY Q D +++ + + P + + +M
Sbjct: 195 LIVSARELFDLMPMEMKNLISWNSMISGYAQ---TSDGVDIASKLFADMPEKDLISWNSM 251
Query: 213 LSVSSRGASLNHGKQIHASA---IRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
+ + HG+ A + R D + +I YAK G + +A+ +F+ +
Sbjct: 252 ID-----GYVKHGRIEDAKGLFDVMPRRD--VVTWATMIDGYAKLGFVHHAKTLFDQMP- 303
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSACTHVGLVEQG- 327
+ D V+++SM+ Q+ EA+E+F M + PD T V VL A +G + +
Sbjct: 304 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 363
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLS 384
+ ++ + L +ID+Y + G +Q A F+ IEN I+ W +++
Sbjct: 364 DMHLYIVEKQFYLGGKLG--VALIDMYSKCGSIQHAMLVFEGIENKSID----HWNAMIG 417
Query: 385 SCKVYKNVDLAKIAAERLLLIE-----PDNSGAYSALANVYSAC 423
++ L + A + LL IE PD+ V +AC
Sbjct: 418 GLAIH---GLGESAFDMLLQIERLSLKPDD----ITFVGVLNAC 454
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 37/312 (11%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + +W MI + G + A F QM RD+V +NSM+AGY Q+ + EALE+FS M
Sbjct: 274 RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDM 333
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++S L PD TL L A L ++ +H YI+ +F + G + ALI MY+K G
Sbjct: 334 EKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGS 393
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
++ A +F+ + N+ + W AMI G
Sbjct: 394 IQ---------------------------------HAMLVFEGIENKSIDHWNAMIGGLA 420
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+GL + A ++ + + +P+ T +L+ S + G + +R + +
Sbjct: 421 IHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG-LLCFELMRRKHKIEPR 479
Query: 243 VGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
+ + ++ + +++GSI+ A+ + + + V W + + A + H E EL K L
Sbjct: 480 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETG-ELVAKHL 538
Query: 301 ALGIEPDHITYV 312
L + +YV
Sbjct: 539 ILQAGYNPSSYV 550
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 268/481 (55%), Gaps = 45/481 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+++ ++ G++ A F +M +RDI MI ++G+ +E+L+ F M +D LK
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG-LKL 115
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D F + S L A NL + GK IH +++ ++ + ++LI MY+K G V AR+V
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 131 EQSEISDLDAIAFTALLDGYA---------------KLGDITPARQI-------FDSLRN 168
S++ + D + F A++ GYA KL I P F +RN
Sbjct: 176 --SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN 233
Query: 169 R-----------------DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAA 211
DVV+WT++I G V N N+ A + F+ M G PNS T+
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIIT 293
Query: 212 MLSVSSRGASLNHGKQIHA-SAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
+L + A + HGK+IH S + ED V +AL+ MY K G I A +F
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGLEDHGF-VRSALLDMYGKCGFISEAMILFRKTP-K 351
Query: 271 NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSY 330
TV+++SMI A HGL ++A+ELF++M A G + DH+T+ +L+AC+H GL + G++
Sbjct: 352 KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNL 411
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
F LM + ++I P L HYACM+DL GRAG L EA++ I+ M +EPD+ WG+LL++C+ +
Sbjct: 412 FLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Query: 391 NVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWL 450
N++LA+IAA+ L +EP+NSG L ++Y+ G WE +++K++ + ++ GSSW+
Sbjct: 472 NMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWV 531
Query: 451 E 451
E
Sbjct: 532 E 532
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 12/281 (4%)
Query: 197 MTKEGPRPNSFTLAA------MLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
M K P+SF L + ++ + R G+ +HA + S + L+T
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y + G + +A+KVF+ + D MI A A++G +E+++ F +M G++ D
Sbjct: 61 YVECGKVLDARKVFDEMP-KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFI 119
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+L A ++ E G+ L+ E + +ID+Y + G + A K ++
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKF-SYESDAFIVSSLIDMYSKFGEVGNARKVFSDL 178
Query: 371 PIEPDVIAWGSLLSSCKVYKNVD--LAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
E D++ + +++S D L + +LL I+PD ++AL + +S E
Sbjct: 179 G-EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVI-TWNALISGFSHMRNEEK 236
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQK 469
++I +LM G K + S I VH F E + K
Sbjct: 237 VSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK 277
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 243/449 (54%), Gaps = 37/449 (8%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++++++ GR+D A F +M RD++TW MI GY + G + ALEL ++Q +
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL-CRLMQFEGV 315
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+P+ T+AS +S C + +N GK +H + +R + ++ +LISMY
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY----------- 364
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
AK + ++F W+A+I G VQN L
Sbjct: 365 ----------------------AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS 402
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
DAL LF+ M +E PN TL ++L + A L IH ++ S+ L+
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 249 TMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
+Y+K G++++A K+FN I + D V W ++I HG G A+++F +M+ G+
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
P+ IT+ L+AC+H GLVE+G + F M +K +HY C++DL GRAG L EA+
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
I +P EP WG+LL++C ++NV L ++AA +L +EP+N+G Y LAN+Y+A G+
Sbjct: 583 LITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLEIQN 454
W+D K+R +M + G++K+ G S +EI++
Sbjct: 643 WKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 192/379 (50%), Gaps = 39/379 (10%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++++MN G++++A F M RD+++WN+MI+GY ++G+ +AL +F M+ +S +
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES-V 214
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
D T+ S L C +L+++ +G+ +H + V+NAL++MY
Sbjct: 215 DLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYL---------- 264
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
K G + AR +FD + RDV+ WT MI GY ++G +
Sbjct: 265 -----------------------KCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE 301
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+ALEL R M EG RPN+ T+A+++SV +N GK +H A+R + I + +LI
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLI 361
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+MYAK +D +VF+ T WS++I Q+ L +A+ LF++M +EP+
Sbjct: 362 SMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FK 365
T +L A + + Q + + +L ++ +Y + G L+ A F
Sbjct: 421 ATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 366 FIENMPIEPDVIAWGSLLS 384
I+ DV+ WG+L+S
Sbjct: 480 GIQEKHKSKDVVLWGALIS 498
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 196/451 (43%), Gaps = 73/451 (16%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDS-SLKPDKFTLAS 77
G I A F++M + ++++N +I Y + G +A+ +F M+ + PD +T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 78 TLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISD 137
A L++M LG +H I+R+ F VQNAL++MY G VE+AR
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR---------- 172
Query: 138 LDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM 197
+FD ++NRDV++W MI GY +NG +DAL +F M
Sbjct: 173 -----------------------DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 198 TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
E + T+ +ML V L G+ +H R I V NAL+ MY K G +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
D A+ VF+ + D ++W+ MI + G E A+EL M G+ P+ +T ++S
Sbjct: 270 DEARFVFDRM-ERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSV 328
Query: 318 CTHVGLVEQGRSY--FNLMASVHK---IEPTL-SHYA-C-MIDLYGR------------- 356
C V G+ + + V+ IE +L S YA C +DL R
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 357 ----AGLLQEA--------FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL 404
AG +Q FK + +EP++ SLL + DL + L
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL--ADLRQAMNIHCYL 446
Query: 405 IEP---DNSGAYSALANVYSACGKWEDAAKI 432
+ + A + L +VYS CG E A KI
Sbjct: 447 TKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 147/285 (51%), Gaps = 10/285 (3%)
Query: 150 YAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR--PNSF 207
YA G IT AR++F+ + ++++ +I YV+ GL DA+ +F M EG + P+ +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
T + + S+ G +H +RS V NAL+ MY G ++ A+ VF+++
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
N D +SW++MI ++G +A+ +F+ M+ ++ DH T V +L C H+ +E G
Sbjct: 179 -KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCK 387
R+ L+ ++ + ++++Y + G + EA +F+ + DVI W +++
Sbjct: 238 RNVHKLVEE-KRLGDKIEVKNALVNMYLKCGRMDEA-RFVFDRMERRDVITWTCMINGYT 295
Query: 388 VYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKI 432
+V+ A + RL+ E A + +A++ S CG DA K+
Sbjct: 296 EDGDVENA-LELCRLMQFEGVRPNAVT-IASLVSVCG---DALKV 335
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 241/441 (54%), Gaps = 37/441 (8%)
Query: 18 SGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAS 77
SG ++ F + + + WN+M++GY+ + +EA+ F M Q +LKPDK TL+
Sbjct: 329 SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM-QFQNLKPDKTTLSV 387
Query: 78 TLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISD 137
LS+C L + GKQIH +IRTE + + + LI++Y++ E+ EIS+
Sbjct: 388 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC----------EKMEISE 437
Query: 138 LDAIAFTALLDGYAKLGDITPARQIFDSLRNR-DVVAWTAMIVGYVQNGLNDDALELFRA 196
IFD N D+ W +MI G+ N L+ AL LFR
Sbjct: 438 C-----------------------IFDDCINELDIACWNSMISGFRHNMLDTKALILFRR 474
Query: 197 MTKEGPR-PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAG 255
M + PN + A +LS SR SL HG+Q H ++S V AL MY K G
Sbjct: 475 MHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCG 534
Query: 256 SIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVL 315
ID+A++ F+ + N TV W+ MI +G G+EA+ L+ KM++ G +PD IT+V VL
Sbjct: 535 EIDSARQFFDAVLRKN-TVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVL 593
Query: 316 SACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPD 375
+AC+H GLVE G + M +H IEP L HY C++D GRAG L++A K E P +
Sbjct: 594 TACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 653
Query: 376 VIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKL 435
+ W LLSSC+V+ +V LA+ AE+L+ ++P +S AY L+N YS+ +W+D+A ++ L
Sbjct: 654 SVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGL 713
Query: 436 MNDRGVKKEQGSSWLEIQNEV 456
MN V K G SW N++
Sbjct: 714 MNKNRVHKTPGQSWTTYGNDL 734
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 215/431 (49%), Gaps = 36/431 (8%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
+R + SWN ++ G + A F M ERD+V+WN+MI+ + GF+++AL ++
Sbjct: 35 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 94
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M+ D L P +FTLAS LSAC+ + + G + H ++T D + V NAL+SMYAK G
Sbjct: 95 MVCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 153
Query: 122 G-VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
V+ RV E +S + +++TA++ G A+ + A Q+F +
Sbjct: 154 FIVDYGVRVFES--LSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-------------- 197
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
+ G+ D++ L ++ PR +L+ + G L GKQIH A+R
Sbjct: 198 -CEKGVQVDSVCLSNILSISAPREGCDSLSEIY-----GNEL--GKQIHCLALRLGFGGD 249
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
+ + N+L+ +YAK ++ A+ +F + N VSW+ MI+ Q ++++E +M
Sbjct: 250 LHLNNSLLEIYAKNKDMNGAELIFAEMPEVN-VVSWNIMIVGFGQEYRSDKSVEFLTRMR 308
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
G +P+ +T + VL AC G VE GR F+ + +P++S + M+ Y
Sbjct: 309 DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHY 363
Query: 361 QEA---FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE-PDNSGAYSAL 416
+EA F+ ++ ++PD +LSSC + ++ K ++ E NS S L
Sbjct: 364 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 423
Query: 417 ANVYSACGKWE 427
VYS C K E
Sbjct: 424 IAVYSECEKME 434
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 111 NALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRD 170
N L+ +Y + G + AR+V + E+S D ++ A L K+GD+ A ++FD + RD
Sbjct: 11 NRLLDLYIECGDGDYARKVFD--EMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERD 68
Query: 171 VVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA 230
VV+W MI V+ G + AL +++ M +G P+ FTLA++LS S+ G + H
Sbjct: 69 VVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHG 128
Query: 231 SAIRSREDLSISVGNALITMYAKAGSI-DNAQKVFNLICWNNDTVSWSSMIIALAQHGLG 289
A+++ D +I VGNAL++MYAK G I D +VF + N+ VS++++I LA+
Sbjct: 129 VAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNE-VSYTAVIGGLARENKV 187
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLS 316
EA+++F M G++ D + +LS
Sbjct: 188 LEAVQMFRLMCEKGVQVDSVCLSNILS 214
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 264/517 (51%), Gaps = 71/517 (13%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM- 62
S+ N +IS++ + +A F +M ERD V+WN++I Y G EA ELF M
Sbjct: 178 SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW 237
Query: 63 ---------------------------------LQDSSLKPDKFTLASTLSACTNLENMN 89
+++ D + L AC+ + +
Sbjct: 238 FSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIR 297
Query: 90 LGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDG 149
LGK+IH I + +D V+N LI+MY+K + A V Q+E + L
Sbjct: 298 LGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL----------- 346
Query: 150 YAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTL 209
W ++I GY Q +++A L R M G +PNS TL
Sbjct: 347 ----------------------CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITL 384
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSR--EDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
A++L + +R A+L HGK+ H +R + +D ++ + N+L+ +YAK+G I A++V +L+
Sbjct: 385 ASILPLCARIANLQHGKEFHCYILRRKCFKDYTM-LWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
D V+++S+I G G A+ LF++M GI+PDH+T V VLSAC+H LV +G
Sbjct: 444 S-KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEG 502
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCK 387
F M + I P L H++CM+DLYGRAG L +A I NMP +P W +LL++C
Sbjct: 503 ERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACH 562
Query: 388 VYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGS 447
++ N + K AAE+LL ++P+N G Y +AN+Y+A G W A++R +M D GVKK+ G
Sbjct: 563 IHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGC 622
Query: 448 SWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
+W++ + +F D+ P+ Y ++D + + +K
Sbjct: 623 AWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 225/523 (43%), Gaps = 72/523 (13%)
Query: 37 VTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHS 96
+ WN +IA Y ++ +E + + M+ ++PD FT S L AC ++ G+ +H
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKG-IRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 97 YIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDI 156
I + + S V NALISMY + + +ARR+ ++ + + DA+++ A+++ YA G
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDR--MFERDAVSWNAVINCYASEGMW 226
Query: 157 TPARQIFDSL----RNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAM 212
+ A ++FD + V+ W + G +Q G AL L M P S AM
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN---FPTSLDPVAM 283
Query: 213 ---LSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
L S ++ GK+IH AI S D +V N LITMY+K + +A VF
Sbjct: 284 IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT-E 342
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
N +W+S+I AQ EEA L +ML G +P+ IT +L C + ++ G+
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE 402
Query: 330 Y----------------FNLMASVH----------KIEPTLSH-----YACMIDLY---G 355
+ +N + V+ ++ +S Y +ID Y G
Sbjct: 403 FHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQG 462
Query: 356 RAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGA--- 412
G+ FK + I+PD + ++LS+C K V ERL + G
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVH----EGERLFMKMQCEYGIRPC 518
Query: 413 ---YSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFG--------A 461
+S + ++Y G A I M K G++W + N HI G A
Sbjct: 519 LQHFSCMVDLYGRAGFLAKAKDIIHNMP----YKPSGATWATLLNACHIHGNTQIGKWAA 574
Query: 462 EDSLH--PQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIE 502
E L P+ Y ++ ++ + + +++ DL ++
Sbjct: 575 EKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 38/278 (13%)
Query: 49 HGFDKEALELFSSM-LQDSSLKPDKFTL---ASTLSACTNLENMNLGKQIHSYIIRTEFD 104
HG +A + FS + LQ SS D L AS LSAC ++ G Q+H++ I + +
Sbjct: 16 HGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVE 75
Query: 105 ISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFD 164
+ L++ Y+ A+ ++E S+I + P
Sbjct: 76 YHSVLVPKLVTFYSAFNLHNEAQSIIENSDI--------------------LHP------ 109
Query: 165 SLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNH 224
+ W +I Y +N L ++ + ++ M +G RP++FT ++L +
Sbjct: 110 -------LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAF 162
Query: 225 GKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALA 284
G+ +H S S S+ V NALI+MY + ++ A+++F+ + + D VSW+++I A
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM-FERDAVSWNAVINCYA 221
Query: 285 QHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
G+ EA ELF+KM G+E IT+ + C G
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 247/435 (56%), Gaps = 44/435 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERD--IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
++ L+ + G ++A F +MS+RD WNS+I+GY + G ++A+ L+ M +D +
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG-V 191
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
KPD+FT L AC + ++ +G+ IH +++ F V NAL+ MYAK G + AR
Sbjct: 192 KPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARN 251
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V FD + ++D V+W +M+ GY+ +GL
Sbjct: 252 V---------------------------------FDMIPHKDYVSWNSMLTGYLHHGLLH 278
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+AL++FR M + G P+ ++++L +R S HG+Q+H IR + +SV NALI
Sbjct: 279 EALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALI 335
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
+Y+K G + A +F+ + DTVSW+++I A H ++ FE+M +PD
Sbjct: 336 VLYSKRGQLGQACFIFDQML-ERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDG 391
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI- 367
IT+V VLS C + G+VE G F+LM+ + I+P + HYACM++LYGRAG+++EA+ I
Sbjct: 392 ITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIV 451
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
+ M +E WG+LL +C ++ N D+ ++AA+RL +EPDN + L +YS + E
Sbjct: 452 QEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAE 511
Query: 428 DAAKIRKLMNDRGVK 442
D ++R++M DRG++
Sbjct: 512 DVERVRQMMVDRGLE 526
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 56/307 (18%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ G I A F + +D V+WNSM+ GY HG EAL++F M+Q+ +
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN-GI 292
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+PDK ++S L+ + ++ G+Q+H ++IR + +V NALI +Y+K G
Sbjct: 293 EPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSKRG------- 342
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+LG A IFD + RD V+W A+I + + N
Sbjct: 343 -----------------------QLGQ---ACFIFDQMLERDTVSWNAIISAHSK---NS 373
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE---DLSISVGN 245
+ L+ F M + +P+ T ++LS+ + + G+++ ++ S+E D +
Sbjct: 374 NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLF--SLMSKEYGIDPKMEHYA 431
Query: 246 ALITMYAKAGSIDNAQK-VFNLICWNNDTVSWSSMIIALAQHG---LGEEAIE-LFEKML 300
++ +Y +AG ++ A + + W +++ A HG +GE A + LFE
Sbjct: 432 CMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE--- 488
Query: 301 ALGIEPD 307
+EPD
Sbjct: 489 ---LEPD 492
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 251/430 (58%), Gaps = 8/430 (1%)
Query: 22 DLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSA 81
D A F + +++ +N+MI Y+ G E+L FSSM + + D++T A L +
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM-KSRGIWADEYTYAPLLKS 111
Query: 82 CTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAI 141
C++L ++ GK +H +IRT F G ++ ++ +Y G + A++V + E+S+ + +
Sbjct: 112 CSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFD--EMSERNVV 169
Query: 142 AFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEG 201
+ ++ G+ GD+ +F + R +V+W +MI + G + +ALELF M +G
Sbjct: 170 VWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG 229
Query: 202 PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR--EDLSISVGNALITMYAKAGSIDN 259
P+ T+ +L +S+ L+ GK IH++A S +D I+VGNAL+ Y K+G ++
Sbjct: 230 FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDF-ITVGNALVDFYCKSGDLEA 288
Query: 260 AQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSAC 318
A +F + N VSW+++I A +G GE I+LF+ M+ G + P+ T++GVL+ C
Sbjct: 289 ATAIFRKMQRRN-VVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACC 347
Query: 319 THVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIA 378
++ G VE+G F LM K+E HY M+DL R+G + EAFKF++NMP+ +
Sbjct: 348 SYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAM 407
Query: 379 WGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMND 438
WGSLLS+C+ + +V LA++AA L+ IEP NSG Y L+N+Y+ G+W+D K+R LM
Sbjct: 408 WGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKK 467
Query: 439 RGVKKEQGSS 448
++K G S
Sbjct: 468 NRLRKSTGQS 477
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 136/288 (47%), Gaps = 37/288 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ WN+MI +SG ++ L F+QMSER IV+WNSMI+ ++ G D+EALELF M
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTE-FDISGAVQNALISMYAKTG 121
+ D PD+ T+ + L +L ++ GK IHS + F V NAL+ Y K+
Sbjct: 226 I-DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS- 283
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
GD+ A IF ++ R+VV+W +I G
Sbjct: 284 --------------------------------GDLEAATAIFRKMQRRNVVSWNTLISGS 311
Query: 182 VQNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAI-RSREDL 239
NG + ++LF AM +EG PN T +L+ S + G+++ + R + +
Sbjct: 312 AVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEA 371
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG 287
A++ + +++G I A K + N + W S++ A HG
Sbjct: 372 RTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
IT N ++ + SG ++ A A F++M R++V+WN++I+G +G + ++LF +M++
Sbjct: 270 ITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIE 329
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYII-RTEFDISGAVQNALISMYAKTGGV 123
+ + P++ T L+ C+ + G+++ ++ R + + A++ + +++G +
Sbjct: 330 EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRI 389
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPA 159
A + ++ + + +A + +LL GD+ A
Sbjct: 390 TEAFKFLKNMPV-NANAAMWGSLLSACRSHGDVKLA 424
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/443 (35%), Positives = 239/443 (53%), Gaps = 39/443 (8%)
Query: 11 MISLHMNSGRIDLALAQFQQMS---ERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
+I ++ N G + A F Q + WNSM++G+ + ++ AL L + Q S
Sbjct: 279 LIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ-SD 337
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
L D +TL+ L C N N+ LG Q+HS ++ + ++
Sbjct: 338 LCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE----------------------- 374
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
LD I + L+D +A +G+I A ++F L N+D++A++ +I G V++G N
Sbjct: 375 ----------LDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
A LFR + K G + F ++ +L V S ASL GKQIH I+ + AL
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATAL 484
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ MY K G IDN +F+ + D VSW+ +I+ Q+G EEA F KM+ +GIEP+
Sbjct: 485 VDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
+T++G+LSAC H GL+E+ RS M S + +EP L HY C++DL G+AGL QEA + I
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELI 603
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
MP+EPD W SLL++C +KN L + AE+LL PD+ Y++L+N Y+ G W+
Sbjct: 604 NKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWD 663
Query: 428 DAAKIRKLMNDRGVKKEQGSSWL 450
+K+R+ G KE G SW+
Sbjct: 664 QLSKVREAAKKLGA-KESGMSWI 685
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 184/384 (47%), Gaps = 15/384 (3%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS++++ + A F +MSER+IVTW +M++GY G +A+EL+ ML
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
++F ++ L AC + ++ LG ++ I + + N+++ MY K G R
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNG------R 157
Query: 129 VVEQS----EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
++E + EI + ++ L+ GY K G + A +F + +VV+W +I G+V
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
G + ALE M +EG + F L L S G L GKQ+H ++S + S
Sbjct: 218 G-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI 276
Query: 245 NALITMYAKAGSIDNAQKVFNL--ICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
+ALI MY+ GS+ A VF+ + N+ W+SM+ + E A+ L ++
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS 336
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
+ D T G L C + + G +L+ V E + ++DL+ G +Q+
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVV-VSGYELDYIVGSILVDLHANVGNIQD 395
Query: 363 AFKFIENMPIEPDVIAWGSLLSSC 386
A K +P D+IA+ L+ C
Sbjct: 396 AHKLFHRLP-NKDIIAFSGLIRGC 418
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 181/381 (47%), Gaps = 37/381 (9%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
S TSWN +IS + +G +D A+ F +M + ++V+WN +I+G+ G ALE M
Sbjct: 172 SSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRM- 229
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
Q L D F L L AC+ + +GKQ+H ++++ + S +ALI MY+ G +
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL 289
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
A V Q +++ N V W +M+ G++
Sbjct: 290 IYAADVFHQEKLA------------------------------VNSSVAVWNSMLSGFLI 319
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
N N+ AL L + + +S+TL+ L + +L G Q+H+ + S +L V
Sbjct: 320 NEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIV 379
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
G+ L+ ++A G+I +A K+F+ + N D +++S +I + G A LF +++ LG
Sbjct: 380 GSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLG 438
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNL-MASVHKIEPTLSHYACMIDLYGRAGLLQE 362
++ D +L C+ + + G+ L + ++ EP + ++D+Y + G +
Sbjct: 439 LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVKCGEIDN 496
Query: 363 AFKFIENMPIEPDVIAWGSLL 383
+ M +E DV++W ++
Sbjct: 497 GVVLFDGM-LERDVVSWTGII 516
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
+I++ LH N G I A F ++ +DI+ ++ +I G + GF+ A LF +++ L
Sbjct: 381 SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK-LGL 439
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
D+F +++ L C++L ++ GKQIH I+ ++ AL+ MY K G E+
Sbjct: 440 DADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCG--EIDNG 497
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
VV +FD + RDVV+WT +IVG+ QNG +
Sbjct: 498 VV-------------------------------LFDGMLERDVVSWTGIIVGFGQNGRVE 526
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--A 246
+A F M G PN T +LS L + ++S L + +
Sbjct: 527 EAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARST-LETMKSEYGLEPYLEHYYC 585
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
++ + +AG A ++ N + D W+S++ A H + EK+L G
Sbjct: 586 VVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFPD 644
Query: 307 DHITYVGVLSACTHVGLVEQ 326
D Y + +A +G+ +Q
Sbjct: 645 DPSVYTSLSNAYATLGMWDQ 664
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 33/207 (15%)
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC 268
+AA L + + G+ I A I+ ++ + N +I+MY + +A KVF+ +
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE-PDHITYVGVLSACTHVGLVEQG 327
N V+W++M+ G +AIEL+ +ML E + Y VL AC VG ++ G
Sbjct: 68 ERN-IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 328 ------------RSYFNLMASV------------------HKIEPTLSHYACMIDLYGRA 357
R LM SV + P+ + + +I Y +A
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 358 GLLQEAFKFIENMPIEPDVIAWGSLLS 384
GL+ EA MP +P+V++W L+S
Sbjct: 187 GLMDEAVTLFHRMP-QPNVVSWNCLIS 212
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/481 (30%), Positives = 262/481 (54%), Gaps = 9/481 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS + G A F MS +DI++WN+++ + + L + ++
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP-KQFQFLNLLHHLLNEAI 428
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEF---DISGAVQNALISMYAKTGGVEV 125
D T+ S L C N++ + K++H Y ++ + + NAL+ YAK G VE
Sbjct: 429 TLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEY 488
Query: 126 ARRV-VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
A ++ + SE L +++ +LL GY G A+ +F + D+ W+ M+ Y ++
Sbjct: 489 AHKIFLGLSERRTL--VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAES 546
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
++A+ +FR + G RPN+ T+ +L V ++ ASL+ +Q H IR I +
Sbjct: 547 CCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLK 605
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
L+ +YAK GS+ +A VF D V +++M+ A HG G+EA+ ++ M I
Sbjct: 606 GTLLDVYAKCGSLKHAYSVFQSDA-RRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNI 664
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
+PDH+ +L+AC H GL++ G ++ + +VH ++PT+ YAC +DL R G L +A+
Sbjct: 665 KPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAY 724
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
F+ MP+EP+ WG+LL +C Y +DL A LL E D++G + ++N+Y+A
Sbjct: 725 SFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADA 784
Query: 425 KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
KWE ++R LM + +KK G SWLE+ + ++F + D HP++D I+ +++ ++ ++K
Sbjct: 785 KWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Query: 485 K 485
+
Sbjct: 845 E 845
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 171/381 (44%), Gaps = 42/381 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+++++ R+D F+QM D V WN ++ G + +E + F +M KP
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKP 120
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
T A L C L + GK +HSYII+ + V NAL+SMYA
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYA------------ 168
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITP-ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
K G I P A FD + ++DVV+W A+I G+ +N + D
Sbjct: 169 ---------------------KFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMAD 207
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSS---RGASLNHGKQIHASAI-RSREDLSISVGN 245
A F M KE PN T+A +L V + + + G+QIH+ + RS + V N
Sbjct: 208 AFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCN 267
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-I 304
+L++ Y + G I+ A +F + + D VSW+ +I A + +A +LF ++ G +
Sbjct: 268 SLVSFYLRVGRIEEAASLFTRM-GSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
PD +T + +L C + + G+ + + + S +I Y R G A+
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 365 KFIENMPIEPDVIAWGSLLSS 385
M + D+I+W ++L +
Sbjct: 387 WAFSLMSTK-DIISWNAILDA 406
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 177/399 (44%), Gaps = 76/399 (19%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++S ++ GRI+ A + F +M +D+V+WN +IAGY + +A +LF +++ +
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDIS-GAVQNALISMYAKTGGVEVAR 127
PD T+ S L C L ++ GK+IHSYI+R + + +V NALIS YA+ G
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFG------ 380
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
D + A F + +D+++W A++ + +
Sbjct: 381 ---------------------------DTSAAYWAFSLMSTKDIISWNAILDAFADSPKQ 413
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS---REDLSISVG 244
L L + E +S T+ ++L + K++H ++++ ++ +G
Sbjct: 414 FQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLG 473
Query: 245 NALITMYAKAGSIDNAQKVF-------NLICWNN------------------------DT 273
NAL+ YAK G+++ A K+F L+ +N+ D
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 274 VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG---LVEQGRSY 330
+WS M+ A+ EAI +F ++ A G+ P+ +T + +L C + LV Q Y
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
+ + I ++D+Y + G L+ A+ ++
Sbjct: 594 I-IRGGLGDIRLK----GTLLDVYAKCGSLKHAYSVFQS 627
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 188/387 (48%), Gaps = 48/387 (12%)
Query: 9 NIMISLHMNSGRI-DLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
N ++S++ G I A F ++++D+V+WN++IAG++++ +A F ML++ +
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT 220
Query: 68 LKPDKFTLASTLSACTNLEN---MNLGKQIHSYII-RTEFDISGAVQNALISMYAKTGGV 123
+P+ T+A+ L C +++ G+QIHSY++ R+ V N+L+S Y + G +
Sbjct: 221 -EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRI 279
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
E A +F + ++D+V+W +I GY
Sbjct: 280 E---------------------------------EAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 184 NGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS-I 241
N A +LF + +G P+S T+ ++L V ++ L GK+IH+ +R L
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
SVGNALI+ YA+ G A F+L+ D +SW++++ A A + + L +L
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 302 LGIEPDHITYVGVLSACTHV---GLVEQGRSYFNLMASVH-KIEPTLSHYACMIDLYGRA 357
I D +T + +L C +V G V++ Y +H + EP L + ++D Y +
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGN--ALLDAYAKC 483
Query: 358 GLLQEAFKFIENMPIEPDVIAWGSLLS 384
G ++ A K + ++++ SLLS
Sbjct: 484 GNVEYAHKIFLGLSERRTLVSYNSLLS 510
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 28/269 (10%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ S+N ++S ++NSG D A F +MS D+ TW+ M+ Y + EA+ +F
Sbjct: 500 RTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE- 558
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEF-DISGAVQNALISMYAKTG 121
+Q ++P+ T+ + L C L +++L +Q H YIIR DI ++ L+ +YAK G
Sbjct: 559 IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR--LKGTLLDVYAKCG 616
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VAWTAM 177
++ A V + DL + FTA++ GYA G A I+ + ++ V T M
Sbjct: 617 SLKHAYSVFQSDARRDL--VMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTM 674
Query: 178 IVGYVQNGLNDDALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNH------------ 224
+ GL D L+++ ++ T G +P A + + +RG L+
Sbjct: 675 LTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEP 734
Query: 225 -----GKQIHASAIRSREDLSISVGNALI 248
G + A +R DL SV N L+
Sbjct: 735 NANIWGTLLRACTTYNRMDLGHSVANHLL 763
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 12/259 (4%)
Query: 145 ALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT-KEGPR 203
++L+ YAK + +++F + + D V W ++ G + + + F+AM + P+
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPK 119
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI-DNAQK 262
P+S T A +L + R +GK +H+ I++ + VGNAL++MYAK G I +A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
F+ I + D VSW+++I +++ + +A F ML EP++ T VL C +
Sbjct: 180 AFDGIA-DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 323 LVEQGRSYFNLMASVHKIEPTLSH-YAC--MIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
RS + + V + +H + C ++ Y R G ++EA M D+++W
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLVSW 297
Query: 380 GSLL----SSCKVYKNVDL 394
++ S+C+ +K L
Sbjct: 298 NVVIAGYASNCEWFKAFQL 316
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 121/272 (44%), Gaps = 24/272 (8%)
Query: 194 FRAMTKEGPRPNSF--TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
FR ++ G F + A SVS L G+ +H + V +++ MY
Sbjct: 11 FRLLSGFGTDHRVFLDVVKACASVSD----LTSGRALHGCVFKLGHIACSEVSKSVLNMY 66
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM-LALGIEPDHIT 310
AK +D+ QK+F + + D V W+ ++ L+ G E + F+ M A +P +T
Sbjct: 67 AKCRRMDDCQKMFRQM-DSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVT 124
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG-LLQEAFKFIEN 369
+ VL C +G G+S + + + TL A ++ +Y + G + +A+ +
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNA-LVSMYAKFGFIFPDAYTAFDG 183
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED- 428
+ + DV++W ++++ +N +A L+++ Y+ +ANV C +
Sbjct: 184 IA-DKDVVSWNAIIAG--FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 429 -AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIF 459
A + + ++ V++ SWL + H+F
Sbjct: 241 IACRSGRQIHSYVVQR----SWL----QTHVF 264
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 257/473 (54%), Gaps = 37/473 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++ + S A+ F+ ++E+D+++W+++IA Y Q+G EAL +F+ M+ D +
Sbjct: 183 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT- 241
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+P+ T+ L AC ++ G++ H IR + V AL+ MY K E
Sbjct: 242 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE---- 297
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ YA +F + +DVV+W A+I G+ NG+
Sbjct: 298 -------------------EAYA----------VFSRIPRKDVVSWVALISGFTLNGMAH 328
Query: 189 DALELFRAMTKE-GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
++E F M E RP++ + +L S L K H+ I+ D + +G +L
Sbjct: 329 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASL 388
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEP 306
+ +Y++ GS+ NA KVFN I DTV W+S+I HG G +A+E F M+ ++P
Sbjct: 389 VELYSRCGSLGNASKVFNGIAL-KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 447
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
+ +T++ +LSAC+H GL+ +G F LM + +++ P L HYA ++DL GR G L A +
Sbjct: 448 NEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 507
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKW 426
+ MP P G+LL +C++++N ++A+ A++L +E +++G Y ++NVY G+W
Sbjct: 508 TKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEW 567
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
E+ K+R + RG+KK S +EI+ +VH F A+D LHP+K+ +Y ++ ++
Sbjct: 568 ENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 620
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 187/375 (49%), Gaps = 37/375 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I +++ GR+ AL F ++ + DIVTW+SM++G+ ++G +A+E F M+ S + P
Sbjct: 83 LIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 142
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D+ TL + +SACT L N LG+ +H ++IR F ++ N+L++ YAK+ +
Sbjct: 143 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFK------ 196
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
A +F + +DV++W+ +I YVQNG +A
Sbjct: 197 ---------------------------EAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 229
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L +F M +G PN T+ +L + L G++ H AIR + + V AL+ M
Sbjct: 230 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 289
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL-GIEPDHI 309
Y K S + A VF+ I D VSW ++I +G+ +IE F ML PD I
Sbjct: 290 YMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 348
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
V VL +C+ +G +EQ + + + + + + A +++LY R G L A K
Sbjct: 349 LMVKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNASKVFNG 407
Query: 370 MPIEPDVIAWGSLLS 384
+ ++ D + W SL++
Sbjct: 408 IALK-DTVVWTSLIT 421
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 173/359 (48%), Gaps = 45/359 (12%)
Query: 31 MSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNL 90
M++R + WN+++ ++ +E L FS M +D KPD FTL L AC L +N
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACGELREVNY 59
Query: 91 GKQIHSYIIRTEFDISGA----VQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTAL 146
G+ IH ++ + D++ V ++LI MY K G R++E
Sbjct: 60 GEMIHGFVKK---DVTLGSDLYVGSSLIYMYIKCG------RMIE--------------- 95
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP-RPN 205
A ++FD L D+V W++M+ G+ +NG A+E FR M P+
Sbjct: 96 ------------ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 143
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
TL ++S ++ ++ G+ +H IR +S+ N+L+ YAK+ + A +F
Sbjct: 144 RVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 203
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
+I D +SWS++I Q+G EA+ +F M+ G EP+ T + VL AC +E
Sbjct: 204 MIA-EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 262
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
QGR L A +E + ++D+Y + +EA+ +P DV++W +L+S
Sbjct: 263 QGRKTHEL-AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALIS 319
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 29/324 (8%)
Query: 166 LRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHG 225
+ R + W ++ + ++ L F M ++ +P++FTL L +N+G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 226 KQIHASAIRSREDLSIS----VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMII 281
+ IH ++D+++ VG++LI MY K G + A ++F+ + D V+WSSM+
Sbjct: 61 EMIHGFV---KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL-EKPDIVTWSSMVS 116
Query: 282 ALAQHGLGEEAIELFEKM-LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKI 340
++G +A+E F +M +A + PD +T + ++SACT + GR +
Sbjct: 117 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR-RGF 175
Query: 341 EPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAE 400
LS +++ Y ++ +EA + M E DVI+W +++ +C V AAE
Sbjct: 176 SNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQNGA-----AAE 228
Query: 401 RLL----LIEPDNSGAYSALANVYSACGKWEDAAKIRK---LMNDRGVKKEQGSSWLEIQ 453
LL +++ + + V AC D + RK L +G++ E S +
Sbjct: 229 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 288
Query: 454 NEVHIFGAEDSLH-----PQKDEI 472
+ F E++ P+KD +
Sbjct: 289 MYMKCFSPEEAYAVFSRIPRKDVV 312
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 262/470 (55%), Gaps = 7/470 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N M+++++ S +D A ++S+ WN +I G++ ++++ ++ ML+ L
Sbjct: 793 NYMLAVNVTSD-VDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLR-FGL 850
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD T + + + L N LG +H ++++ + + N LI MY AR+
Sbjct: 851 LPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARK 910
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ + E+ + + + ++LD YAK GD+ AR +FD + RDVV W++MI GYV+ G +
Sbjct: 911 LFD--EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 968
Query: 189 DALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
ALE+F M + G + N T+ +++ + +LN GK +H + L++ + +L
Sbjct: 969 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSL 1028
Query: 248 ITMYAKAGSIDNAQKVF-NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
I MYAK GSI +A VF D + W+++I LA HG E+++LF KM I+P
Sbjct: 1029 IDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDP 1088
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
D IT++ +L+AC+H GLV++ +F + EP HYACM+D+ RAGL+++A F
Sbjct: 1089 DEITFLCLLAACSHGGLVKEAWHFFKSLKE-SGAEPKSEHYACMVDVLSRAGLVKDAHDF 1147
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKW 426
I MPI+P G+LL+ C + N++LA+ ++L+ ++P N G Y LANVY+ ++
Sbjct: 1148 ISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQF 1207
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMM 476
A +R+ M +GVKK G S L++ H F A D H D+IY ++
Sbjct: 1208 RAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 1257
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 122/222 (54%), Gaps = 4/222 (1%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+++ +WN ++ + SG + A F +MSERD+VTW+SMI GY + G +ALE+F M
Sbjct: 918 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM 977
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ S K ++ T+ S + AC +L +N GK +H YI+ ++ +Q +LI MYAK G
Sbjct: 978 MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGS 1037
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAWTAMI 178
+ A V ++ + + DA+ + A++ G A G I + Q+F +R + D + + ++
Sbjct: 1038 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 1097
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGA 220
GL +A F+++ + G P S A M+ V SR
Sbjct: 1098 AACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAG 1139
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 183/425 (43%), Gaps = 55/425 (12%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELF 59
++ ++N MI G ID L+ +M E D++T+ S+I G G EA+ +
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNL----ENMNLGKQIHSYIIRTEFDISGAVQNALIS 115
+ M + P++ T + + E + +++ + + + ++ ++ +S
Sbjct: 708 NEM-KGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLS 766
Query: 116 MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG-----DITPARQIFDSLRNRD 170
G + R +V + F +D L D+ A + L +
Sbjct: 767 SENINAGFGIFREMVHKGR--------FPVSVDRNYMLAVNVTSDVDYAYKFLSKLSDPP 818
Query: 171 VVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA 230
W +I G+ + + ++ ++ M + G P+ T ++ SSR ++ G +H
Sbjct: 819 NYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHC 878
Query: 231 SAIRSREDLSISVGNALITMYAKAGSIDNAQKVF------NLICWNN------------- 271
S ++S + + + N LI MY +A+K+F NL+ WN+
Sbjct: 879 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 938
Query: 272 -----------DTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSACT 319
D V+WSSMI + G +A+E+F++M+ +G + + +T V V+ AC
Sbjct: 939 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 998
Query: 320 HVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPI-EPDVIA 378
H+G + +G++ + VH + T+ +ID+Y + G + +A+ + E D +
Sbjct: 999 HLGALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 1057
Query: 379 WGSLL 383
W +++
Sbjct: 1058 WNAII 1062
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 144/362 (39%), Gaps = 66/362 (18%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSERDIVT----WNSMIAGYNQHGFDKEALELFSSM 62
S +I+I+ + + ++D+A+ + + ++ +N++I G + G +E+L+L M
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 63 LQDSSLKPDKFTLASTLSA----CTNLENMNLGKQIHSY-----IIRTEFDISGAVQNAL 113
+D+ ++P +FTL C + ++L K++ Y I T F + +N
Sbjct: 501 -KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENG- 558
Query: 114 ISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVA 173
R V+ + LD +A G LG + VA
Sbjct: 559 --------------RAVDACKY--LDDVA------GEGFLGHM---------------VA 581
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
TA I G ++N D LELFR + G P+ ++ + + +
Sbjct: 582 STAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMV 641
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW--------NNDTVSWSSMIIALAQ 285
+++ N++I + K G ID L C N D ++++S+I L
Sbjct: 642 SKGLKPTVATYNSMIDGWCKEGEIDRG-----LSCIVRMYEDEKNPDVITYTSLIHGLCA 696
Query: 286 HGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLS 345
G EAI + +M P+ IT++ ++ G + YF M ++EP +
Sbjct: 697 SGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEE-KEMEPDSA 755
Query: 346 HY 347
Y
Sbjct: 756 VY 757
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 243/443 (54%), Gaps = 36/443 (8%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G ++ A F ++ R+ V W ++ GY ++ D E LF +++D+ L
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC-LMRDTGLAL 208
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEF-DISGAVQNALISMYAKTGGVEVARRV 129
D TL + AC N+ +GK +H IR F D S +Q ++I MY K
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC--------- 259
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
LLD AR++F++ +R+VV WT +I G+ + +
Sbjct: 260 ---------------RLLDN---------ARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
A +LFR M +E PN TLAA+L S SL HGK +H IR+ ++ + I
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MYA+ G+I A+ VF+++ N +SWSSMI A +GL EEA++ F KM + + P+ +
Sbjct: 356 MYARCGNIQMARTVFDMMPERN-VISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSV 414
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T+V +LSAC+H G V++G F M + + P HYACM+DL GRAG + EA FI+N
Sbjct: 415 TFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDN 474
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
MP++P AWG+LLS+C+++K VDLA AE+LL +EP+ S Y L+N+Y+ G WE
Sbjct: 475 MPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMV 534
Query: 430 AKIRKLMNDRGVKKEQGSSWLEI 452
+R+ M +G +K G S E+
Sbjct: 535 NCVRRKMGIKGYRKHVGQSATEV 557
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 42/376 (11%)
Query: 15 HMNSGRIDLALAQFQQMS--ERDIVTWNSMIAGYNQHG--FDKEALELFSSMLQDSSLKP 70
++ S R+D A + F ++ +R+ +WN++++GY++ + L L++ M +
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCD-GV 107
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D F L + AC L + G IH ++ D V +L+ MYA+ G +E A++V
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV- 166
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
FD + R+ V W ++ GY++ + +
Sbjct: 167 --------------------------------FDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI-RSREDLSISVGNALIT 249
LF M G ++ TL ++ + GK +H +I RS D S + ++I
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MY K +DNA+K+F + + V W+++I A+ EA +LF +ML I P+
Sbjct: 255 MYVKCRLLDNARKLFE-TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T +L +C+ +G + G+S M + IE ++ ID+Y R G +Q A +
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIR-NGIEMDAVNFTSFIDMYARCGNIQMARTVFDM 372
Query: 370 MPIEPDVIAWGSLLSS 385
MP E +VI+W S++++
Sbjct: 373 MP-ERNVISWSSMINA 387
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 10/247 (4%)
Query: 144 TALLDGYAKLGDITPARQIFDSL----RNRDVVAWTAMIVGYVQNG--LNDDALELFRAM 197
++L + Y + + A F+ + RNR +W ++ GY ++ D L L+ M
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRH--SWNTILSGYSKSKTCCYSDVLLLYNRM 100
Query: 198 TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
+ +SF L + L +G IH A+++ D V +L+ MYA+ G++
Sbjct: 101 RRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTM 160
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
++AQKVF+ I N +V W ++ ++ E LF M G+ D +T + ++ A
Sbjct: 161 ESAQKVFDEIPVRN-SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKA 219
Query: 318 CTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVI 377
C +V + G+ + I+ + A +ID+Y + LL A K E ++ +V+
Sbjct: 220 CGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVV 278
Query: 378 AWGSLLS 384
W +L+S
Sbjct: 279 MWTTLIS 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 24/244 (9%)
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI-CW 269
A+L++ S+ +LNH +Q+HA I + + +G++L Y ++ +D A FN I CW
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 270 NNDTVSWSSMIIALAQHGLG--EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE-- 325
+ SW++++ ++ + + L+ +M D V + AC +GL+E
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 326 ---QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
G + N + + P+L +++Y + G ++ A K + +P+ V+ WG L
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSL------VEMYAQLGTMESAQKVFDEIPVRNSVL-WGVL 181
Query: 383 LSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANV--YSACGKWEDAAKIRKLMNDR 439
+ K K+ ++ RL + D A AL + ACG A K+ K ++
Sbjct: 182 MKGYLKYSKDPEVF-----RLFCLMRDTGLALDALTLICLVKACGN-VFAGKVGKCVHGV 235
Query: 440 GVKK 443
+++
Sbjct: 236 SIRR 239
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 269/521 (51%), Gaps = 73/521 (14%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R SWN MIS + + RI AL F++M ER+ V+W++MI G+ Q+G A+ LF M
Sbjct: 134 RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 63 -LQDSS--------------LKPDKFTLASTLSACTNLENM------------------- 88
++DSS L + L S + E++
Sbjct: 194 PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEA 253
Query: 89 ---------NLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQ------- 132
+L H R F + N++I Y K G V AR + +Q
Sbjct: 254 ARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI 313
Query: 133 ----------------------SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRD 170
SE+ + DA ++ ++ GYA +G++ AR F+ +
Sbjct: 314 SWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKH 373
Query: 171 VVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA 230
V+W ++I Y +N +A++LF M EG +P+ TL ++LS S+ +L G Q+H
Sbjct: 374 TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQ 433
Query: 231 SAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGE 290
+++ + V NALITMY++ G I ++++F+ + + ++W++MI A HG
Sbjct: 434 IVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
EA+ LF M + GI P HIT+V VL+AC H GLV++ ++ F M SV+KIEP + HY+ +
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 351 IDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNS 410
+++ G +EA I +MP EPD WG+LL +C++Y NV LA +AAE + +EP++S
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESS 612
Query: 411 GAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLE 451
Y L N+Y+ G W++A+++R M + +KKE+GSSW++
Sbjct: 613 TPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 199/483 (41%), Gaps = 113/483 (23%)
Query: 16 MNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTL 75
+ SG I A F+++ R+ VTWN+MI+GY + +A +LF M K D T
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP-----KRDVVTW 105
Query: 76 ASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV---EVARRVVEQ 132
N +IS Y GG+ E AR++ +
Sbjct: 106 -----------------------------------NTMISGYVSCGGIRFLEEARKLFD- 129
Query: 133 SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALE 192
E+ D+ ++ ++ GYAK I A +F+ + R+ V+W+AMI G+ QNG D A+
Sbjct: 130 -EMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVV 188
Query: 193 LFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQI---HASAIRSREDLSISVGNALIT 249
LFR M P +S L A+++ + L+ + + S + REDL + N LI
Sbjct: 189 LFRKM----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL-VYAYNTLIV 243
Query: 250 MYAKAGSIDNAQKVF---------------------NLICWNN----------------- 271
Y + G ++ A+ +F N++ WN+
Sbjct: 244 GYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLL 303
Query: 272 -------DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLV 324
DT+SW++MI E+A LF +M D ++ ++S VG V
Sbjct: 304 FDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM----PNRDAHSWNMMVSGYASVGNV 359
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE---PDVIAWGS 381
E R YF H + + +I Y + +EA M IE PD S
Sbjct: 360 ELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 382 LLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
LLS+ N+ L + ++ + ++AL +YS CG+ ++ R++ ++ +
Sbjct: 415 LLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMES---RRIFDEMKL 471
Query: 442 KKE 444
K+E
Sbjct: 472 KRE 474
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 34/311 (10%)
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNS 206
L+ + G I AR IF+ L R+ V W MI GYV+ + A +LF M P+ +
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDV 102
Query: 207 FTLAAMLS--VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF 264
T M+S VS G + + SR+ S N +I+ YAK I A +F
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFS---WNTMISGYAKNRRIGEALLLF 159
Query: 265 NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLV 324
+ N VSWS+MI Q+G + A+ LF KM P G++ + L
Sbjct: 160 EKMPERN-AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIK---NERLS 215
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP------------- 371
E + V E + Y +I YG+ G ++ A + +P
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 372 -IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSACGKWED 428
+V++W S++ K Y + + + + RLL ++ ++ +++ + + Y + ED
Sbjct: 276 RFCKNVVSWNSMI---KAY--LKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMED 330
Query: 429 AAKIRKLMNDR 439
A + M +R
Sbjct: 331 AFALFSEMPNR 341
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 258/474 (54%), Gaps = 36/474 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+++L+M G++D A F +M++RD++ W +M+ G+ Q G +A+E + M Q+
Sbjct: 157 VLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREM-QNEGFGR 215
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D+ + L A +L + +G+ +H Y+ RT ++ V+
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE-------------------- 255
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
T+L+D YAK+G I A ++F + + V+W ++I G+ QNGL + A
Sbjct: 256 -------------TSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA 302
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
E M G +P+ TL +L S+ SL G+ +H ++ R L AL+ M
Sbjct: 303 FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK-RHVLDRVTATALMDM 361
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y+K G++ +++++F + D V W++MI HG G+E + LF KM IEPDH T
Sbjct: 362 YSKCGALSSSREIFEHV-GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHAT 420
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+ +LSA +H GLVEQG+ +F++M + +KI+P+ HY C+IDL RAG ++EA I +
Sbjct: 421 FASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 371 PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAA 430
++ + W +LLS C ++N+ + IAA ++L + PD+ G + ++N ++ KW++ A
Sbjct: 481 KLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVA 540
Query: 431 KIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIK 484
K+RKLM + ++K G S +E+ E+ F ED H + + +++ + EI+
Sbjct: 541 KVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 194/415 (46%), Gaps = 45/415 (10%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAST 78
G I A F ++ +R + +NSMI Y++ E L L+ M+ + ++PD T T
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEK-IQPDSSTFTMT 122
Query: 79 LSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
+ AC +SG V +++ K V+ +
Sbjct: 123 IKAC----------------------LSGLVLEKGEAVWCK--AVDFGYKN--------- 149
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
D +++L+ Y K G + A +F + RDV+ WT M+ G+ Q G + A+E +R M
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
EG + + +L S G+ +H R+ +++ V +L+ MYAK G I+
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
A +VF+ + + VSW S+I AQ+GL +A E +M +LG +PD +T VGVL AC
Sbjct: 270 VASRVFSRMMFKT-AVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVAC 328
Query: 319 THVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIA 378
+ VG ++ GR + H ++ + ++D+Y + G L + + E++ D++
Sbjct: 329 SQVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVG-RKDLVC 385
Query: 379 WGSLLSSCKVYKN----VDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
W +++S ++ N V L E IEPD++ +++L + S G E
Sbjct: 386 WNTMISCYGIHGNGQEVVSLFLKMTES--NIEPDHA-TFASLLSALSHSGLVEQG 437
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 3/239 (1%)
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
L+ ++G+I+ AR++FD L R V + +MIV Y + D+ L L+ M E +P+
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
S T + G L G+ + A+ + V ++++ +Y K G +D A+ +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
+ D + W++M+ AQ G +A+E + +M G D + +G+L A +G +
Sbjct: 176 KMA-KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
GRS + + + ++D+Y + G ++ A + M + V +WGSL+S
Sbjct: 235 MGRSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAV-SWGSLIS 291
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/471 (36%), Positives = 255/471 (54%), Gaps = 42/471 (8%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ L+ G++ + +S+R+IV WNS+I+ Y G +AL LF M+ +KP
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR-IKP 403
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVARRV 129
D FTLAS++SAC N + LGKQIH ++IRT D+S VQN+LI MY+
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNSLIDMYS----------- 450
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
K G + A +F+ +++R VV W +M+ G+ QNG + +
Sbjct: 451 ----------------------KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR-EDLSISVGNALI 248
A+ LF M N T A++ S SL GK +H I S +DL ALI
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD--TALI 546
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MYAK G ++ A+ VF + + VSWSSMI A HG AI F +M+ G +P+
Sbjct: 547 DMYAKCGDLNAAETVFRAM-SSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNE 605
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+ ++ VLSAC H G VE+G+ YFNLM S + P H+AC IDL R+G L+EA++ I+
Sbjct: 606 VVFMNVLSACGHSGSVEEGKYYFNLMKSF-GVSPNSEHFACFIDLLSRSGDLKEAYRTIK 664
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWED 428
MP D WGSL++ C++++ +D+ K L I D++G Y+ L+N+Y+ G+WE+
Sbjct: 665 EMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEE 724
Query: 429 AAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKI 479
++R M +KK G S +EI +V FGA + Q DEIY+ + +
Sbjct: 725 FRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 194/360 (53%), Gaps = 41/360 (11%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
T N +++++ G + + F+++++++ V+W +MI+ YN+ F ++AL FS M++
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK- 296
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
S ++P+ TL S LS+C + + GK +H + +R E D
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD--------------------- 335
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
+ ++++ AL++ YA+ G ++ + + +R++VAW ++I Y G
Sbjct: 336 ----------PNYESLSL-ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS-VG 244
+ AL LFR M + +P++FTLA+ +S + GKQIH IR+ D+S V
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQ 442
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
N+LI MY+K+GS+D+A VFN I + V+W+SM+ +Q+G EAI LF+ M +
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQI-KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL 501
Query: 305 EPDHITYVGVLSACTHVGLVEQGR-SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
E + +T++ V+ AC+ +G +E+G+ + L+ S K L +ID+Y + G L A
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK---DLFTDTALIDMYAKCGDLNAA 558
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 45/377 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ +G + A F M RD+V W+++++ ++G +AL +F M+ D ++P
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDD-GVEP 200
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D T+ S + C L + + + +H I R FD+ + N+L++MY+K G + + R+
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
E+ + ++ V+WTAMI Y + ++ A
Sbjct: 261 EK---------------------------------IAKKNAVSWTAMISSYNRGEFSEKA 287
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI-SVGNALIT 249
L F M K G PN TL ++LS + GK +H A+R D + S+ AL+
Sbjct: 288 LRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVE 347
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
+YA+ G + + + V ++ + + V+W+S+I A G+ +A+ LF +M+ I+PD
Sbjct: 348 LYAECGKLSDCETVLRVVS-DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAF 406
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSH---YACMIDLYGRAGLLQEAFKF 366
T +SAC + GLV G+ H I +S +ID+Y ++G + A
Sbjct: 407 TLASSISACENAGLVPLGKQIHG-----HVIRTDVSDEFVQNSLIDMYSKSGSVDSA-ST 460
Query: 367 IENMPIEPDVIAWGSLL 383
+ N V+ W S+L
Sbjct: 461 VFNQIKHRSVVTWNSML 477
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 193/371 (52%), Gaps = 41/371 (11%)
Query: 55 ALELFSSMLQDSSLKPDKFTLASTLSACT-NLENMNLGKQIHSYIIRTEFDISGAVQNAL 113
A++L+ ++ +++ + KF S L AC + E++++G ++H II+
Sbjct: 84 AIDLYHRLVSETT-QISKFVFPSVLRACAGSREHLSVGGKVHGRIIK------------- 129
Query: 114 ISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVA 173
GGV D DA+ T+LL Y + G+++ A ++FD + RD+VA
Sbjct: 130 -------GGV-------------DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVA 169
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
W+ ++ ++NG AL +F+ M +G P++ T+ +++ + L + +H
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAI 293
R DL ++ N+L+TMY+K G + +++++F I N VSW++MI + + E+A+
Sbjct: 230 RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN-AVSWTAMISSYNRGEFSEKAL 288
Query: 294 ELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA-CMID 352
F +M+ GIEP+ +T VLS+C +GL+ +G+S A +++P + +++
Sbjct: 289 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF-AVRRELDPNYESLSLALVE 347
Query: 353 LYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGA 412
LY G L + + + + + +++AW SL+ S ++ + + + R ++ + A
Sbjct: 348 LYAECGKLSDC-ETVLRVVSDRNIVAWNSLI-SLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 413 YSALANVYSAC 423
++ LA+ SAC
Sbjct: 406 FT-LASSISAC 415
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 157/341 (46%), Gaps = 41/341 (12%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
D + T L++ YA +G +R +F++ D + +I V L D A++L+ +
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 199 KEGPRPNSFTLAAML-SVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
E + + F ++L + + L+ G ++H I+ D + +L+ MY + G++
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNL 152
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
+A+KVF+ + D V+WS+++ + ++G +A+ +F+ M+ G+EPD +T + V+
Sbjct: 153 SDAEKVFDGMPV-RDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 318 CTHVGLVEQGRS-YFNLMASVHKIEPTLSH-----------------------------Y 347
C +G + RS + + + ++ TL + +
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 348 ACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSCKVYKNVDLAK----IAAE 400
MI Y R ++A + M IEP+++ S+LSSC + + K A
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 401 RLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
R L +P+ AL +Y+ CGK D + ++++DR +
Sbjct: 332 REL--DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 51/280 (18%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ SG +D A F Q+ R +VTWNSM+ G++Q+G EA+ LF M S L
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH-SYL 501
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA----VQNALISMYAKTGGVE 124
+ ++ T + + AC+++ ++ GK +H +I ISG ALI MYAK
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-----ISGLKDLFTDTALIDMYAKC---- 552
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
GD+ A +F ++ +R +V+W++MI Y +
Sbjct: 553 -----------------------------GDLNAAETVFRAMSSRSIVSWSSMINAYGMH 583
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG 244
G A+ F M + G +PN +LS S+ GK + + ++S +S
Sbjct: 584 GRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKY-YFNLMKS---FGVSPN 639
Query: 245 N----ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMI 280
+ I + +++G + A + + + D W S++
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLV 679
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 267/486 (54%), Gaps = 48/486 (9%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
NI++S + G ++ + F QMSER++V+W +MI+ +A+ +F +M D +
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDG-V 368
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
P++ T ++A E + G +IH I+T F +V N+ I++YAK
Sbjct: 369 YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK--------- 419
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
F AL D A++ F+ + R++++W AMI G+ QNG +
Sbjct: 420 --------------FEALED----------AKKAFEDITFREIISWNAMISGFAQNGFSH 455
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSV--SSRGASLNHGKQIHASAIRSREDLSISVGNA 246
+AL++F + E PN +T ++L+ + S+ G++ HA ++ + V +A
Sbjct: 456 EALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSA 514
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
L+ MYAK G+ID ++KVFN + N V W+S+I A + HG E + LF KM+ + P
Sbjct: 515 LLDMYAKRGNIDESEKVFNEMSQKNQFV-WTSIISAYSSHGDFETVMNLFHKMIKENVAP 573
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
D +T++ VL+AC G+V++G FN+M V+ +EP+ HY+CM+D+ GRAG L+EA +
Sbjct: 574 DLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 633
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKW 426
+ +P P S+L SC+++ NV + AE + ++P+ SG+Y + N+Y+ +W
Sbjct: 634 MSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEW 693
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQN-----EVHIFGAEDSLHPQKDEIYKMMDKIWE 481
+ AA+IRK M + V KE G SW+++ + + F + D HP+ DEIY+M++ I
Sbjct: 694 DKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGL 753
Query: 482 EIKKLG 487
E+ G
Sbjct: 754 EMNLEG 759
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 204/449 (45%), Gaps = 86/449 (19%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ +GR D AL F+ + + D+V+WN++++G++ D + F ++ + +
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFD----DNQIALNFVVRMKSAGV 170
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
D FT ++ LS C E LG Q+ S +++T + V N+ I+MY+++G ARR
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 129 VVEQSEISD----------------------------------LDAIAFTALLDGYAKLG 154
V ++ D LD ++FT+++
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 155 DITPARQI-----------------------------------FDSLRNRDVVAWTAMIV 179
D+ ARQI F + R+VV+WT MI
Sbjct: 291 DLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI- 349
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
+ DDA+ +F M +G PN T +++ + G +IH I++
Sbjct: 350 ----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS 405
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
SVGN+ IT+YAK ++++A+K F I + + +SW++MI AQ+G EA+++F
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFEDITF-REIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 300 LALGIEPDHITYVGVLSACTHVG--LVEQG-RSYFNLMASVHKIEPTLSHYACMIDLYGR 356
A + P+ T+ VL+A V+QG R + +L+ P +S + ++D+Y +
Sbjct: 465 AAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAK 521
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
G + E+ K M + + W S++S+
Sbjct: 522 RGNIDESEKVFNEMS-QKNQFVWTSIISA 549
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 48/338 (14%)
Query: 55 ALELFSSMLQDSSLKP--DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNA 112
AL +F LQ D+ TL L AC ++ G QIH + + F V NA
Sbjct: 59 ALSIFKENLQLGYFGRHMDEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNA 116
Query: 113 LISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV 172
++ MY K G + A IF++L + DVV
Sbjct: 117 VMGMYRKAGRFD---------------------------------NALCIFENLVDPDVV 143
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS--VSSRGASLNHGKQIHA 230
+W ++ G+ N + AL M G ++FT + LS V S G L G Q+ +
Sbjct: 144 SWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL--GLQLQS 198
Query: 231 SAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG-LG 289
+ +++ + + VGN+ ITMY+++GS A++VF+ + + D +SW+S++ L+Q G G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF-KDMISWNSLLSGLSQEGTFG 257
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
EA+ +F M+ G+E DH+++ V++ C H ++ R L E L
Sbjct: 258 FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIK-RGYESLLEVGNI 316
Query: 350 MIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCK 387
++ Y + G+L EA K + + E +V++W +++SS K
Sbjct: 317 LMSRYSKCGVL-EAVKSVFHQMSERNVVSWTTMISSNK 353
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 239/444 (53%), Gaps = 40/444 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ +++ G I A F + S D+V W +MI GY +G EAL LF M + +KP
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM-KGVEIKP 341
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTE-FDISGAVQNALISMYAKTGGVEVARRV 129
+ T+AS LS C +EN+ LG+ +H I+ +D + V NAL+ MYAK
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKC--------- 390
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
+ DA + +F+ +D+VAW ++I G+ QNG +
Sbjct: 391 -----YQNRDA-------------------KYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR--SREDLSISVGNAL 247
AL LF M E PN T+A++ S + SL G +HA +++ S+ VG AL
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ YAK G +A+ +F+ I N T++WS+MI + G ++ELFE+ML +P+
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEKN-TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPN 545
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
T+ +LSAC H G+V +G+ YF+ M + P+ HY CM+D+ RAG L++A I
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
E MPI+PDV +G+ L C ++ DL +I +++L + PD++ Y ++N+Y++ G+W
Sbjct: 606 EKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWN 665
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLE 451
A ++R LM RG+ K G S +E
Sbjct: 666 QAKEVRNLMKQRGLSKIAGHSTME 689
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 202/417 (48%), Gaps = 49/417 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++SL+ G A F Q+ E D W M+ Y + E ++L+ +L +
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYD-LLMKHGFRY 140
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D + L ACT L++++ GK+IH +++
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVK------------------------------ 170
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+ D + T LLD YAK G+I A ++F+ + R+VV WT+MI GYV+N L ++
Sbjct: 171 ----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L LF M + N +T ++ ++ ++L+ GK H ++S +LS + +L+ M
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y K G I NA++VFN + D V W++MI+ +G EA+ LF+KM + I+P+ +T
Sbjct: 287 YVKCGDISNARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
VLS C + +E GRS L V + +++ ++ +Y + ++A K++ M
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVAN--ALVHMYAKCYQNRDA-KYVFEM 402
Query: 371 PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYS----ALANVYSAC 423
E D++AW S++S ++ E L L NS + + +A+++SAC
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIH------EALFLFHRMNSESVTPNGVTVASLFSAC 453
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 199/416 (47%), Gaps = 42/416 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G I A F ++ R++V W SMIAGY ++ +E L LF+ M +++ L
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG- 240
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+++T + + ACT L ++ GK H ++++ ++S + +L+ MY K G + ARRV
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+E S +D + +TA++ GY NG ++A
Sbjct: 301 --NEHSHVDLVMWTAMIVGYT-------------------------------HNGSVNEA 327
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L LF+ M +PN T+A++LS +L G+ +H +I+ +V NAL+ M
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKV-GIWDTNVANALVHM 386
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK +A+ VF + D V+W+S+I +Q+G EA+ LF +M + + P+ +T
Sbjct: 387 YAKCYQNRDAKYVFEMES-EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA-CMIDLYGRAGLLQEAFKFIEN 369
+ SAC +G + G S + + + H ++D Y + G Q A + I +
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFD 504
Query: 370 MPIEPDVIAWGSLLSSC-KVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
E + I W +++ K + ++ E L + N +++ + SACG
Sbjct: 505 TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS---ILSACG 557
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 248/462 (53%), Gaps = 43/462 (9%)
Query: 22 DLALAQFQQMSERDIV--TWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
DLA A+ + D TWN + GY+ E++ ++S M + +KP+K T L
Sbjct: 62 DLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEM-KRRGIKPNKLTFPFLL 120
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
AC + + G+QI +++ FD V N LI +Y + SD
Sbjct: 121 KACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTC------------KKTSD-- 166
Query: 140 AIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTK 199
AR++FD + R+VV+W +++ V+NG + E F M
Sbjct: 167 -------------------ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 200 EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDN 259
+ P+ T+ +LS G +L+ GK +H+ + +L+ +G AL+ MYAK+G ++
Sbjct: 208 KRFCPDETTMVVLLSAC--GGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEY 265
Query: 260 AQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA-LGIEPDHITYVGVLSAC 318
A+ VF + + + +WS+MI+ LAQ+G EEA++LF KM+ + P+++T++GVL AC
Sbjct: 266 ARLVFERMV-DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 319 THVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIA 378
+H GLV+ G YF+ M +HKI+P + HY M+D+ GRAG L EA+ FI+ MP EPD +
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 379 WGSLLSSCKVYKNVD---LAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKL 435
W +LLS+C ++ + D + + +RL+ +EP SG +AN ++ W +AA++R++
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRV 444
Query: 436 MNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMD 477
M + +KK G S LE+ H F + + IY+++D
Sbjct: 445 MKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 46/293 (15%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I L+ + A F +M+ER++V+WNS++ ++G E F M+
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI-GKRF 210
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
PD+ T+ LSAC N++LGK +HS ++ E +++ + AL+ MYAK+GG+E AR
Sbjct: 211 CPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARL 268
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V F+ + +++V W+AMIVG Q G +
Sbjct: 269 V---------------------------------FERMVDKNVWTWSAMIVGLAQYGFAE 295
Query: 189 DALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHG-KQIHA-SAIRSREDLSISVGN 245
+AL+LF M KE RPN T +L S ++ G K H I + + I G
Sbjct: 296 EALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYG- 354
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQH------GLGEEA 292
A++ + +AG ++ A + + D V W +++ A + H G+GE+
Sbjct: 355 AMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKV 407
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 229/425 (53%), Gaps = 35/425 (8%)
Query: 24 ALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACT 83
+L+ F M R+I +WN +I +++ GF ++++LF M ++S ++PD FTL L AC+
Sbjct: 67 SLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACS 126
Query: 84 NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAF 143
G IH ++ F S V +AL+ MY
Sbjct: 127 ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD------------------------ 162
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
+G + AR++FD + RD V +TAM GYVQ G L +FR M G
Sbjct: 163 ---------MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 213
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
+S + ++L + +L HGK +H IR L +++GNA+ MY K +D A V
Sbjct: 214 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 273
Query: 264 FNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGL 323
F + D +SWSS+I+ G + +LF++ML GIEP+ +T++GVLSAC H GL
Sbjct: 274 FVNMS-RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGL 332
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
VE+ YF LM + I P L HYA + D RAGLL+EA KF+E+MP++PD G++L
Sbjct: 333 VEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVL 391
Query: 384 SSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKK 443
S CKVY NV++ + A L+ ++P + Y LA +YSA G++++A +R+ M ++ + K
Sbjct: 392 SGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISK 451
Query: 444 EQGSS 448
G S
Sbjct: 452 VPGCS 456
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 21/250 (8%)
Query: 144 TALLDGYAKLGDITPAR-QIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP 202
+ L+ Y+KL + P +F + R++ +W +I + ++G +++LF M +E
Sbjct: 51 SKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESC 110
Query: 203 -RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQ 261
RP+ FTL +L S G IH ++ S+ V +AL+ MY G + +A+
Sbjct: 111 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR 170
Query: 262 KVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHV 321
K+F+ + D+V +++M Q G + +F +M G D + V +L AC +
Sbjct: 171 KLFDDMP-VRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQL 229
Query: 322 GLVEQGRSYFNLMASVHKIEPTLSHYACM--------IDLYGRAGLLQEAFKFIENMPIE 373
G ++ G+ SVH + +C+ D+Y + +L A NM
Sbjct: 230 GALKHGK-------SVHGW--CIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS-R 279
Query: 374 PDVIAWGSLL 383
DVI+W SL+
Sbjct: 280 RDVISWSSLI 289
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 141/354 (39%), Gaps = 73/354 (20%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++++ G++ A F M RD V + +M GY Q G L +F M S
Sbjct: 156 LVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREM-GYSGFAL 214
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D + S L AC L + GK +H + IR + + NA+ MY K ++ A V
Sbjct: 215 DSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVF 274
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+S D I++++L+ GY GD+ + ++FD
Sbjct: 275 --VNMSRRDVISWSSLILGYGLDGDVVMSFKLFDE------------------------- 307
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
M KEG PN+ T +LS + HG + S + R
Sbjct: 308 ------MLKEGIEPNAVTFLGVLSACA------HGGLVEKSWLYFR-------------- 341
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
+ +N++ + ++S+ +++ GL EEA + E M ++PD
Sbjct: 342 ---------LMQEYNIV---PELKHYASVADCMSRAGLLEEAEKFLEDM---PVKPDEAV 386
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEP-TLSHYACMIDLYGRAGLLQEA 363
VLS C G VE G + + +++P S+Y + LY AG EA
Sbjct: 387 MGAVLSGCKVYGNVEVGE---RVARELIQLKPRKASYYVTLAGLYSAAGRFDEA 437
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N + +++ +D A F MS RD+++W+S+I GY G + +LF ML++ +
Sbjct: 255 NAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKE-GI 313
Query: 69 KPDKFTLASTLSACTN---LENMNL-GKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
+P+ T LSAC + +E L + + Y I E +V + + ++ G +E
Sbjct: 314 EPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCM----SRAGLLE 369
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQI---FDSLRNRDVVAWTAMIVGY 181
A + +E + +A+ A+L G G++ ++ L+ R + + Y
Sbjct: 370 EAEKFLEDMPVKPDEAV-MGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLY 428
Query: 182 VQNGLNDDALELFRAMTKE 200
G D+A E R KE
Sbjct: 429 SAAGRFDEA-ESLRQWMKE 446
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 242/484 (50%), Gaps = 62/484 (12%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F+++ WN +I GY+ E + + M++ +PD++T + C+N
Sbjct: 66 FERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 88 MNLGKQIHSYIIRTEF-----------DISGAVQN--------------------ALISM 116
+ +G +H ++R F D G ++ AL+
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 117 YAKTGGVEVARRVVEQ-----------------------------SEISDLDAIAFTALL 147
Y K+G +E A+ + + E+ D I++T+++
Sbjct: 186 YVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMI 245
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
DGYAK GD+ AR +F+ R DV AW+A+I+GY QNG ++A ++F M + +P+ F
Sbjct: 246 DGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEF 305
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS-VGNALITMYAKAGSIDNAQKVFNL 266
+ ++S S+ +++ + + S V ALI M AK G +D A K+F
Sbjct: 306 IMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEE 365
Query: 267 ICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ 326
+ D VS+ SM+ +A HG G EAI LFEKM+ GI PD + + +L C LVE+
Sbjct: 366 MP-QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEE 424
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
G YF LM + I + HY+C+++L R G L+EA++ I++MP E AWGSLL C
Sbjct: 425 GLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGC 484
Query: 387 KVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQG 446
++ N ++A++ A L +EP ++G+Y L+N+Y+A +W D A +R MN+ G+ K G
Sbjct: 485 SLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICG 544
Query: 447 SSWL 450
SW+
Sbjct: 545 RSWI 548
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 133/319 (41%), Gaps = 69/319 (21%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVT------------------------ 38
R++ SWN ++ + SG + A F +M +RDI++
Sbjct: 205 RNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEA 264
Query: 39 -------WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLG 91
W+++I GY Q+G EA ++FS M ++KPD+F + +SAC+ + L
Sbjct: 265 RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCA-KNVKPDEFIMVGLMSACSQMGCFELC 323
Query: 92 KQIHSYI-IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGY 150
+++ SY+ R S V ALI M AK G +D
Sbjct: 324 EKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH------------------------MDRA 359
Query: 151 AKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
AKL + P R D+V++ +M+ G +G +A+ LF M EG P+
Sbjct: 360 AKLFEEMPQR---------DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFT 410
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--ALITMYAKAGSIDNAQKVFNLIC 268
+L V + + G + + +R + + S + ++ + ++ G + A ++ +
Sbjct: 411 VILKVCGQSRLVEEGLR-YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Query: 269 WNNDTVSWSSMIIALAQHG 287
+ +W S++ + HG
Sbjct: 470 FEAHASAWGSLLGGCSLHG 488
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I ++ G +D A F++M +RD+V++ SM+ G HG EA+ LF M+ D + P
Sbjct: 346 LIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMV-DEGIVP 404
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVARR 128
D+ L C + G + ++R ++ I + + ++++ ++TG ++ A
Sbjct: 405 DEVAFTVILKVCGQSRLVEEGLRYFE-LMRKKYSILASPDHYSCIVNLLSRTGKLKEAYE 463
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDI----TPARQIFD 164
++ +S + A A+ +LL G + G+ AR +F+
Sbjct: 464 LI-KSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE 502
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 240/438 (54%), Gaps = 36/438 (8%)
Query: 38 TWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSY 97
T NS+I Y + AL +F ML PDK++ L AC G+QIH
Sbjct: 107 THNSVIRAYANSSTPEVALTVFREMLLGPVF-PDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 98 IIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLD--------- 148
I++ V+N L+++Y ++G E+AR+V+++ + D A+++ +LL
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD--AVSWNSLLSAYLEKGLVD 223
Query: 149 ----------------------GYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
GYA G + A+++FDS+ RDVV+W AM+ Y G
Sbjct: 224 EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC 283
Query: 187 NDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
++ LE+F M + +P+ FTL ++LS + SL+ G+ +H + ++ +
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLAT 343
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
AL+ MY+K G ID A +VF D +W+S+I L+ HGLG++A+E+F +M+ G +
Sbjct: 344 ALVDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 402
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
P+ IT++GVLSAC HVG+++Q R F +M+SV+++EPT+ HY CM+DL GR G ++EA +
Sbjct: 403 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 462
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
+ +P + I SLL +CK + ++ A+ A RLL + +S Y+ ++N+Y++ G+
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGR 522
Query: 426 WEDAAKIRKLMNDRGVKK 443
WE R+ M V +
Sbjct: 523 WEKVIDGRRNMRAERVNR 540
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 36/304 (11%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ SWN MIS + +G + A F M RD+V+WN+M+ Y G E LE+F+ M
Sbjct: 235 RNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
L DS+ KPD FTL S LSAC +L +++ G+ +H YI + +I G + AL+ MY+K
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKC-- 352
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
G I A ++F + RDV W ++I
Sbjct: 353 -------------------------------GKIDKALEVFRATSKRDVSTWNSIISDLS 381
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA--SAIRSREDLS 240
+GL DALE+F M EG +PN T +LS + L+ +++ S++ R + +
Sbjct: 382 VHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVY-RVEPT 440
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
I ++ + + G I+ A+++ N I + ++ S++ A + G E+A + ++L
Sbjct: 441 IEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLL 500
Query: 301 ALGI 304
L +
Sbjct: 501 ELNL 504
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 151/330 (45%), Gaps = 31/330 (9%)
Query: 156 ITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSV 215
++ A I + + + + ++I Y + + AL +FR M P+ ++ +L
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 216 SSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVS 275
+ G+QIH I+S + V N L+ +Y ++G + A+KV + + D VS
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPV-RDAVS 208
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA 335
W+S++ A + GL +EA LF++M +E + G +A GLV++ + F+ M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAA----GLVKEAKEVFDSMP 264
Query: 336 SVHKIEPTLSHYACMIDLYGRAGLLQEAF----KFIENMPIEPDVIAWGSLLSSCKVYKN 391
+ +S + M+ Y G E K +++ +PD S+LS+C
Sbjct: 265 ----VRDVVS-WNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC----- 314
Query: 392 VDLAKIAAERLLLIEPDNSGA------YSALANVYSACGKWEDAAKIRKLMNDRGVKKEQ 445
L ++ + + D G +AL ++YS CGK + A ++ + + R V
Sbjct: 315 ASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDV---- 370
Query: 446 GSSWLEIQNEVHIFG-AEDSLHPQKDEIYK 474
S+W I +++ + G +D+L + +Y+
Sbjct: 371 -STWNSIISDLSVHGLGKDALEIFSEMVYE 399
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 246/446 (55%), Gaps = 41/446 (9%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ + G A F +M RD+V+W +I G+ + G KEAL+ FS M +
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM----DV 200
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+P+ T L + + ++LGK IH I++ IS NALI MY K
Sbjct: 201 EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKC-------- 252
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
++SD A ++F L +D V+W +MI G V +
Sbjct: 253 ----EQLSD---------------------AMRVFGELEKKDKVSWNSMISGLVHCERSK 287
Query: 189 DALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+A++LF M T G +P+ L ++LS + +++HG+ +H + + +G A+
Sbjct: 288 EAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAI 347
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ MYAK G I+ A ++FN I + + +W++++ LA HG G E++ FE+M+ LG +P+
Sbjct: 348 VDMYAKCGYIETALEIFNGI-RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPN 406
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASV-HKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
+T++ L+AC H GLV++GR YF+ M S + + P L HY CMIDL RAGLL EA +
Sbjct: 407 LVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALEL 466
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNV-DLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
++ MP++PDV G++LS+CK + +L K + L IE ++SG Y L+N+++A +
Sbjct: 467 VKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRR 526
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLE 451
W+D A+IR+LM +G+ K GSS++E
Sbjct: 527 WDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 156/354 (44%), Gaps = 43/354 (12%)
Query: 38 TWNSMIAGYNQHGFDKEALELFS-SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHS 96
++N++++ Y DK + +F+ + PD FT AC + GKQIH
Sbjct: 73 SYNTLLSSYAV--CDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 97 YIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDI 156
+ + F VQN+L+ Y G A +V +
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGE------------------------ 166
Query: 157 TPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVS 216
P R DVV+WT +I G+ + GL +AL+ F M E PN T +L S
Sbjct: 167 MPVR---------DVVSWTGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSS 214
Query: 217 SRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSW 276
R L+ GK IH ++ +S+ GNALI MY K + +A +VF + D VSW
Sbjct: 215 GRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGEL-EKKDKVSW 273
Query: 277 SSMIIALAQHGLGEEAIELFEKM-LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA 335
+SMI L +EAI+LF M + GI+PD VLSAC +G V+ GR +
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 336 SVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
+ I+ ++D+Y + G ++ A + I N +V W +LL ++
Sbjct: 334 TA-GIKWDTHIGTAIVDMYAKCGYIETALE-IFNGIRSKNVFTWNALLGGLAIH 385
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 146/321 (45%), Gaps = 66/321 (20%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
L S+ + N +I +++ ++ A+ F ++ ++D V+WNSMI+G KEA++LFS
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M S +KPD L S LSAC +L ++ G+ +H YI+ + A++ MYAK G
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCG 355
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+E TAL +IF+ +R+++V W A++ G
Sbjct: 356 YIE-------------------TAL--------------EIFNGIRSKNVFTWNALLGGL 382
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
+G ++L F M K G +PN T A L+ ++ G++ + ++SRE
Sbjct: 383 AIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR-YFHKMKSRE---- 437
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
+NL + MI L + GL +EA+EL + A
Sbjct: 438 ----------------------YNLF---PKLEHYGCMIDLLCRAGLLDEALELVK---A 469
Query: 302 LGIEPDHITYVGVLSACTHVG 322
+ ++PD +LSAC + G
Sbjct: 470 MPVKPDVRICGAILSACKNRG 490
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 184/471 (39%), Gaps = 101/471 (21%)
Query: 70 PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
P+K L +S C++L KQI + +I + + N +++ K+ V
Sbjct: 4 PEKSVLLELISRCSSLRVF---KQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSV 60
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
+ S S L + ++ LL YA P IF A+ +V NG +
Sbjct: 61 ILHSIRSVLSSFSYNTLLSSYAVCDK--PRVTIF---------AYKT----FVSNGFS-- 103
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
P+ FT + + + + GKQIH + I V N+L+
Sbjct: 104 --------------PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVH 149
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
Y G NA KVF + D VSW+ +I + GL +EA++ F KM +EP+
Sbjct: 150 FYGVCGESRNACKVFGEM-PVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLA 205
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLM---ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
TYV VL + VG + G+ L+ AS+ +E +ID+Y + L +A +
Sbjct: 206 TYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG----NALIDMYVKCEQLSDAMRV 261
Query: 367 IENMP-----------------------------------IEPDVIAWGSLLSSCKVYKN 391
+ I+PD S+LS+C
Sbjct: 262 FGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 392 VDLAKIAAERLLL--IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSW 449
VD + E +L I+ D +A+ ++Y+ CG E A +I G++ + +W
Sbjct: 322 VDHGRWVHEYILTAGIKWDTHIG-TAIVDMYAKCGYIETALEIFN-----GIRSKNVFTW 375
Query: 450 LEIQNEVHIFG-AEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDL 499
+ + I G +SL + +EE+ KLGF P+ + L L
Sbjct: 376 NALLGGLAIHGHGLESL------------RYFEEMVKLGFKPNLVTFLAAL 414
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 243/451 (53%), Gaps = 40/451 (8%)
Query: 28 FQQMSERD-IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLE 86
F ++ +RD V WN+++ GY+Q ++AL +FS M ++ + + T+ S LSA T
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKM-REEGVGVSRHTITSVLSAFTVSG 276
Query: 87 NMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTAL 146
+++ G+ IH ++T V NALI MY K+ +E
Sbjct: 277 DIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLE---------------------- 314
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNS 206
A IF+++ RD+ W +++ + G +D L LF M G RP+
Sbjct: 315 -----------EANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 207 FTLAAMLSVSSRGASLNHGKQIHA----SAIRSREDLSISVGNALITMYAKAGSIDNAQK 262
TL +L R ASL G++IH S + +R+ + + N+L+ MY K G + +A+
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
VF+ + D+ SW+ MI GE A+++F M G++PD IT+VG+L AC+H G
Sbjct: 424 VFDSM-RVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 323 LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
+ +GR++ M +V+ I PT HYAC+ID+ GRA L+EA++ + PI + + W S+
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSI 542
Query: 383 LSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
LSSC+++ N DLA +A +RL +EP++ G Y ++NVY GK+E+ +R M + VK
Sbjct: 543 LSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 443 KEQGSSWLEIQNEVHIFGAEDSLHPQKDEIY 473
K G SW+ ++N VH F + HP+ I+
Sbjct: 603 KTPGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 42/364 (11%)
Query: 74 TLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
T +TL C ++ G+QIH +++R F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGF------------------------------ 91
Query: 134 EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALEL 193
D A T+L++ YAK G + A +F RDV + A+I G+V NG DA+E
Sbjct: 92 --LDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMET 148
Query: 194 FRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAK 253
+R M G P+ +T ++L S L+ K++H A + D VG+ L+T Y+K
Sbjct: 149 YREMRANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSK 207
Query: 254 AGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVG 313
S+++AQKVF+ + +D+V W++++ +Q E+A+ +F KM G+ T
Sbjct: 208 FMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITS 267
Query: 314 VLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE 373
VLSA T G ++ GRS L + A +ID+YG++ L+EA E M E
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA-LIDMYGKSKWLEEANSIFEAMD-E 325
Query: 374 PDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSACGKWEDAAK 431
D+ W S+L + D ER+L I PD L V CG+ +
Sbjct: 326 RDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD----IVTLTTVLPTCGRLASLRQ 381
Query: 432 IRKL 435
R++
Sbjct: 382 GREI 385
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 139/312 (44%), Gaps = 55/312 (17%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ S ++ A + F+ M ERD+ TWNS++ ++ G L LF ML S +
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC-SGI 359
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA---------VQNALISMYAK 119
+PD TL + L C L ++ G++IH Y+I +SG + N+L+ MY K
Sbjct: 360 RPDIVTLTTVLPTCGRLASLRQGREIHGYMI-----VSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIV 179
G D+ AR +FDS+R +D +W MI
Sbjct: 415 CG---------------------------------DLRDARMVFDSMRVKDSASWNIMIN 441
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
GY + AL++F M + G +P+ T +L S LN G+ A L
Sbjct: 442 GYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNIL 501
Query: 240 SISVGNA-LITMYAKAGSIDNAQK--VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELF 296
S A +I M +A ++ A + + IC ++ V W S++ + HG + A+
Sbjct: 502 PTSDHYACVIDMLGRADKLEEAYELAISKPIC--DNPVVWRSILSSCRLHGNKDLALVAG 559
Query: 297 EKMLALGIEPDH 308
+++ L EP+H
Sbjct: 560 KRLHEL--EPEH 569
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 227/422 (53%), Gaps = 37/422 (8%)
Query: 33 ERDIVTWNSMIAGYNQHGFDKEALELFSSML-QDSSLKPDKFTLASTLSACTNLENMNLG 91
+++ VTW++MI GY ++ KEA E+F ML D+ + L C +++ G
Sbjct: 268 KKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGG 327
Query: 92 KQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYA 151
+ +H Y ++ F + VQN +IS YAK G +L D +
Sbjct: 328 RCVHCYAVKAGFILDLTVQNTIISFYAKYG-----------------------SLCDAF- 363
Query: 152 KLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAA 211
RQ F + +DV+++ ++I G V N +++ LF M G RP+ TL
Sbjct: 364 --------RQ-FSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 212 MLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN 271
+L+ S A+L HG H + ++ S+ NAL+ MY K G +D A++VF+ +
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-HKR 473
Query: 272 DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYF 331
D VSW++M+ HGLG+EA+ LF M G+ PD +T + +LSAC+H GLV++G+ F
Sbjct: 474 DIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLF 533
Query: 332 NLMA-SVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
N M+ + P + HY CM DL RAG L EA+ F+ MP EPD+ G+LLS+C YK
Sbjct: 534 NSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYK 593
Query: 391 NVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWL 450
N +L ++++ + + + + L+N YSA +WEDAA+IR + RG+ K G SW+
Sbjct: 594 NAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Query: 451 EI 452
++
Sbjct: 653 DV 654
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 53/400 (13%)
Query: 1 RLRSITSWNIMISL---HMNSGRIDLALAQFQQMSERDI--VTWNSMIAGYNQHGFDKEA 55
R +++S ++++L + + ++LA F ++ I + W+ MI Y + F ++A
Sbjct: 28 RSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKA 87
Query: 56 LELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALIS 115
L+L+ ML +S ++P K+T L AC L ++ GK IHS++ ++F V AL+
Sbjct: 88 LDLYYKML-NSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVD 146
Query: 116 MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWT 175
YAK G +E+A +V FD + RD+VAW
Sbjct: 147 FYAKCGELEMAIKV---------------------------------FDEMPKRDMVAWN 173
Query: 176 AMIVGYVQNGLNDDALELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
AMI G+ + D + LF M + +G PN T+ M R +L GK +H R
Sbjct: 174 AMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTR 233
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIE 294
+ V ++ +YAK+ I A++VF+L + + V+WS+MI ++ + +EA E
Sbjct: 234 MGFSNDLVVKTGILDVYAKSKCIIYARRVFDLD-FKKNEVTWSAMIGGYVENEMIKEAGE 292
Query: 295 LFEKMLALGIEPDHITYVG------VLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA 348
+F +ML D++ V +L C G + GR + A L+
Sbjct: 293 VFFQMLV----NDNVAMVTPVAIGLILMGCARFGDLSGGRC-VHCYAVKAGFILDLTVQN 347
Query: 349 CMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV 388
+I Y + G L +AF+ + ++ DVI++ SL++ C V
Sbjct: 348 TIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGCVV 386
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 147/303 (48%), Gaps = 40/303 (13%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+T N +IS + G + A QF ++ +D++++NS+I G + +E+ LF M +
Sbjct: 343 LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM-R 401
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
S ++PD TL L+AC++L + G H Y + + ++ ++ NAL+ MY K G ++
Sbjct: 402 TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLD 461
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
VA+RV FD++ RD+V+W M+ G+ +
Sbjct: 462 VAKRV---------------------------------FDTMHKRDIVSWNTMLFGFGIH 488
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS---- 240
GL +AL LF +M + G P+ TL A+LS S ++ GKQ+ S SR D +
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM--SRGDFNVIPR 546
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
I N + + A+AG +D A N + + D +++ A + E E+ +KM
Sbjct: 547 IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQ 606
Query: 301 ALG 303
+LG
Sbjct: 607 SLG 609
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 112/255 (43%), Gaps = 34/255 (13%)
Query: 77 STLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVARRVVEQSEI 135
S L C N+ LG+ IH ++++ +S + V L +YA VE+AR V
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVF----- 58
Query: 136 SDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFR 195
D P +I + +AW MI Y N + AL+L+
Sbjct: 59 -------------------DEIPHPRI-------NPIAWDLMIRAYASNDFAEKALDLYY 92
Query: 196 AMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAG 255
M G RP +T +L + +++ GK IH+ S + V AL+ YAK G
Sbjct: 93 KMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG 152
Query: 256 SIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL-GIEPDHITYVGV 314
++ A KVF+ + D V+W++MI + H + I LF M + G+ P+ T VG+
Sbjct: 153 ELEMAIKVFDEM-PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 315 LSACTHVGLVEQGRS 329
A G + +G++
Sbjct: 212 FPALGRAGALREGKA 226
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 227/413 (54%), Gaps = 37/413 (8%)
Query: 39 WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
WN+++ Y +H +A++++ M++ + L PD+++L + A + + LGK++HS
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVL-PDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 99 IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITP 158
+R F ++ I++Y K G E
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFE---------------------------------N 170
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR 218
AR++FD R + +W A+I G G ++A+E+F M + G P+ FT+ ++ +
Sbjct: 171 ARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGG 230
Query: 219 GASLNHGKQIHASAIRSR--EDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSW 276
L+ Q+H ++++ E I + N+LI MY K G +D A +F + N VSW
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN-VVSW 289
Query: 277 SSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMAS 336
SSMI+ A +G EA+E F +M G+ P+ IT+VGVLSAC H GLVE+G++YF +M S
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKS 349
Query: 337 VHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAK 396
++EP LSHY C++DL R G L+EA K +E MP++P+V+ WG L+ C+ + +V++A+
Sbjct: 350 EFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 397 IAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSW 449
A ++ +EP N G Y LANVY+ G W+D ++RKLM + V K S+
Sbjct: 410 WVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
I+L+ +G + A F + ER + +WN++I G N G EA+E+F M + S L+P
Sbjct: 158 FITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDM-KRSGLEP 216
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYII--RTEFDISGAVQNALISMYAKTGGVEVARR 128
D FT+ S ++C L +++L Q+H ++ +TE + N+LI MY K G +++A
Sbjct: 217 DDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASH 276
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ E E+ + +++++++ GYA NG
Sbjct: 277 IFE--EMRQRNVVSWSSMIVGYA-------------------------------ANGNTL 303
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL--SISVGNA 246
+ALE FR M + G RPN T +LS G + GK A ++S +L +S
Sbjct: 304 EALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGC 362
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG 287
++ + ++ G + A+KV + + + W ++ + G
Sbjct: 363 IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ GR+DLA F++M +R++V+W+SMI GY +G EALE F M ++ +
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM-REFGV 317
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVA 126
+P+K T LSAC + + GK + ++++EF++ + + ++ + ++ G ++ A
Sbjct: 318 RPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQI 162
++VVE+ + + + + L+ G K GD+ A +
Sbjct: 377 KKVVEEMPMKP-NVMVWGCLMGGCEKFGDVEMAEWV 411
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 244/467 (52%), Gaps = 36/467 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ +++A FQ+M + +V WNSMI GY G K +E+ + M+ + + +P
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RP 307
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ TL S L AC+ N+ GK IH Y+IR+ V NA
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRS-------VVNA------------------ 342
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
D +L+D Y K G+ A +F + +W MI Y+ G A
Sbjct: 343 --------DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKA 394
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
+E++ M G +P+ T ++L S+ A+L GKQIH S SR + + +AL+ M
Sbjct: 395 VEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDM 454
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y+K G+ A ++FN I D VSW+ MI A HG EA+ F++M G++PD +T
Sbjct: 455 YSKCGNEKEAFRIFNSI-PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+ VLSAC H GL+++G +F+ M S + IEP + HY+CMID+ GRAG L EA++ I+
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573
Query: 371 PIEPD-VIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
P D +L S+C ++ L A L+ PD++ Y L N+Y++ W+ A
Sbjct: 574 PETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAA 633
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMM 476
++R M + G++K+ G SW+E+ ++V F AED H + + +Y+ +
Sbjct: 634 RRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 192/362 (53%), Gaps = 37/362 (10%)
Query: 24 ALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACT 83
+L F +M ERD+ +WN++I+ + Q G ++ALELF M + S +P+ +L +SAC+
Sbjct: 161 SLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRM-ESSGFEPNSVSLTVAISACS 219
Query: 84 NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAF 143
L + GK+IH ++ F++ V +AL+ MY K +EVAR V ++ L +A+
Sbjct: 220 RLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL--VAW 277
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
+++ GY GD + +E+ M EG R
Sbjct: 278 NSMIKGYVAKGD-------------------------------SKSCVEILNRMIIEGTR 306
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
P+ TL ++L SR +L HGK IH IRS + I V +LI +Y K G + A+ V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 264 FNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGL 323
F+ + SW+ MI + G +A+E++++M+++G++PD +T+ VL AC+ +
Sbjct: 367 FSKT-QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 324 VEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+E+G+ +L S ++E + ++D+Y + G +EAF+ ++P + DV++W ++
Sbjct: 426 LEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMI 483
Query: 384 SS 385
S+
Sbjct: 484 SA 485
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 216/506 (42%), Gaps = 104/506 (20%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D+ WNS+++GY+++ + LE+F +L S PD FT + + A L LG+ I
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
H+ ++++ + V ++L+ MYAK E
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFE------------------------------ 159
Query: 155 DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
+ Q+FD + RDV +W +I + Q+G + ALELF M G PNS +L +S
Sbjct: 160 ---NSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTV 274
SR L GK+IH ++ +L V +AL+ MY K ++ A++VF + V
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM-PRKSLV 275
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
+W+SMI G + +E+ +M+ G P T +L AC+ + G+ + +
Sbjct: 276 AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK-FIHGY 334
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEA----------------------------FKF 366
+ + +IDLY + G A FK
Sbjct: 335 VIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKA 394
Query: 367 IE------NMPIEPDVIAWGSLLSSC----------KVYKNVDLAKIAAERLLLIEPDNS 410
+E ++ ++PDV+ + S+L +C +++ ++ +++ + LLL
Sbjct: 395 VEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL------ 448
Query: 411 GAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKD 470
SAL ++YS CG ++A +I + K+ SW + + +G+ H Q
Sbjct: 449 ---SALLDMYSKCGNEKEAFRIFN-----SIPKKDVVSWTVM---ISAYGS----HGQPR 493
Query: 471 EIYKMMDKIWEEIKKLGFIPDTDSVL 496
E D E++K G PD ++L
Sbjct: 494 EALYQFD----EMQKFGLKPDGVTLL 515
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 34/302 (11%)
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC 268
L+ + ++ SL K +H + + + +LI +Y +A+ VF
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI-EPDHITYVGVLSACTHVGLVEQG 327
+D W+S++ +++ + + +E+F+++L I PD T+ V+ A +G G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 328 RSYFNLMASVHKIEPTLSHYAC-------MIDLYGRAGLLQEAFKFIENMPIEPDVIAWG 380
R L+ S Y C ++ +Y + L + + + + MP E DV +W
Sbjct: 127 RMIHTLVVK--------SGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWN 177
Query: 381 SLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYS-ALANVYSACGK--WEDAAKIRKLMN 437
+++S Y++ + K A E +E S +L SAC + W + K ++
Sbjct: 178 TVISC--FYQSGEAEK-ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG---KEIH 231
Query: 438 DRGVKKEQGSSWLEIQNE--VHIFGAEDSLHPQKDEIYKMMDK---IWEEIKKLGFIPDT 492
+ VKK G E N V ++G D L ++ KM K W + K G++
Sbjct: 232 RKCVKK--GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK-GYVAKG 288
Query: 493 DS 494
DS
Sbjct: 289 DS 290
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 246/420 (58%), Gaps = 7/420 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSE-RDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
N MI+ + G ID AL+ F + E D ++WN++IAGY Q+G+++EAL++ SM +++
Sbjct: 197 NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM-EENG 255
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
LK D+ + + L+ ++L+++ +GK++H+ +++ + V + ++ +Y K G ++ A
Sbjct: 256 LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAE 315
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
+L + ++++ GY+ G + A+++FDSL +++V WTAM +GY+
Sbjct: 316 SAHLLYGFGNL--YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQP 373
Query: 188 DDALELFRA-MTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
D LEL RA + E P+S + ++L S A + GK+IH ++R+ + + A
Sbjct: 374 DSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTA 433
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
+ MY+K G+++ A+++F+ + DTV +++MI A HG ++ + FE M G +P
Sbjct: 434 FVDMYSKCGNVEYAERIFD-SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKP 492
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
D IT++ +LSAC H GLV +G YF M + I P HY CMIDLYG+A L +A +
Sbjct: 493 DEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIEL 552
Query: 367 IENM-PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
+E + +E D + G+ L++C KN +L K E+LL+IE N Y +AN Y++ +
Sbjct: 553 MEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSAR 612
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 207/425 (48%), Gaps = 48/425 (11%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQ-MSERDIVTWNSMIAGYNQ-HGFDKEALELFS 60
R++ SWN +I+ ++ + A F+ ERD++T+N++++G+ + G + EA+E+F
Sbjct: 52 RNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFG 111
Query: 61 SM--LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
M + + D FT+ + + L N+ G+Q+H +++T D + ++LI MY+
Sbjct: 112 EMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYS 171
Query: 119 KTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN---RDVVAWT 175
K G + + S + +D++A A++ Y + GDI A +F RN D ++W
Sbjct: 172 KCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVF--WRNPELNDTISWN 229
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+I GY QNG ++AL++ +M + G + + + A+L+V S SL GK++HA +++
Sbjct: 230 TLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKN 289
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIEL 295
+ V + ++ +Y K G++ A+ L + N S SSMI+ + G EA L
Sbjct: 290 GSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN-LYSASSMIVGYSSQGKMVEAKRL 348
Query: 296 FEKM----------LALGI----------------------EPDHITYVGVLSACTHVGL 323
F+ + + LG PD + V VL AC+
Sbjct: 349 FDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAY 408
Query: 324 VEQGRSY--FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGS 381
+E G+ +L + + ++ + +D+Y + G ++ A + ++ E D + + +
Sbjct: 409 MEPGKEIHGHSLRTGILMDKKLVTAF---VDMYSKCGNVEYAERIFDS-SFERDTVMYNA 464
Query: 382 LLSSC 386
+++ C
Sbjct: 465 MIAGC 469
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 114/262 (43%), Gaps = 69/262 (26%)
Query: 136 SDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ------------ 183
S L A++ L++ Y+K G + AR +FD + R+V +W A+I YV+
Sbjct: 19 STLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFE 78
Query: 184 ---------------------NGLNDDALELFRAMTKEGPRP---NSFTLAAMLSVSSRG 219
+G +A+E+F M ++ + FT+ M+ +S++
Sbjct: 79 SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKL 138
Query: 220 ASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC----------- 268
++ +G+Q+H +++ D + ++LI MY+K G +FN C
Sbjct: 139 TNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNA 198
Query: 269 ------------------WN----NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
W NDT+SW+++I AQ+G EEA+++ M G++
Sbjct: 199 MIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKW 258
Query: 307 DHITYVGVLSACTHVGLVEQGR 328
D ++ VL+ + + ++ G+
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGK 280
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 239/444 (53%), Gaps = 49/444 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++M G ++ L F+ + + ++V W S+I+G+ + +A+E F M Q + +K
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM-QSNGVKA 206
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
++ + L AC G+ Y
Sbjct: 207 NETIMVDLLVAC--------GRCFDPYF-------------------------------- 226
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
QS++ + I T+L+D YAK GD+ AR +FD + R +V+W ++I GY QNG ++A
Sbjct: 227 -QSKVG-FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEA 284
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L +F M G P+ T +++ S G+ IHA ++ ++ AL+ M
Sbjct: 285 LCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNM 344
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHI 309
YAK G ++A+K F + DT++W+ +II LA HG G EA+ +F++M G PD I
Sbjct: 345 YAKTGDAESAKKAFEDL-EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGI 403
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
TY+GVL AC+H+GLVE+G+ YF M +H +EPT+ HY CM+D+ RAG +EA + ++
Sbjct: 404 TYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKT 463
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPD--NSGAYSALANVYSACGKWE 427
MP++P+V WG+LL+ C +++N++L R ++ EP+ SG Y L+N+Y+ G+W
Sbjct: 464 MPVKPNVNIWGALLNGCDIHENLELTDRI--RSMVAEPEELGSGIYVLLSNIYAKAGRWA 521
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLE 451
D IR+ M + V K G S +E
Sbjct: 522 DVKLIRESMKSKRVDKVLGHSSVE 545
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 163/359 (45%), Gaps = 46/359 (12%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
+ A + F+ + + WNSMI GY+ +AL + ML+ PD FT L
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLR-KGYSPDYFTFPYVLK 115
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
AC+ L ++ G +H ++++T F+++ V L+ MY G V R
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLR------------ 163
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
+F+ + +VVAW ++I G+V N DA+E FR M
Sbjct: 164 ---------------------VFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
G + N + +L R +S+ ++ + +LI MYAK G + A
Sbjct: 203 GVKANETIMVDLLVACGR---------CFDPYFQSKVGFNVILATSLIDMYAKCGDLRTA 253
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
+ +F+ + VSW+S+I +Q+G EEA+ +F ML LGI PD +T++ V+ A
Sbjct: 254 RYLFDGM-PERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMI 312
Query: 321 VGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
G + G+S ++ ++ + ++++Y + G + A K E++ + D IAW
Sbjct: 313 QGCSQLGQSIHAYVSKTGFVKDA-AIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAW 369
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 155 DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
+++ AR +F+S+ V W +MI GY + D AL ++ M ++G P+ FT +L
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC-WNNDT 273
S + G +H +++ ++++ V L+ MY G ++ +VF I WN
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN--V 173
Query: 274 VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNL 333
V+W S+I + +AIE F +M + G++ + V +L AC GR +
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC--------GRCFDPY 225
Query: 334 MASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
S K+ + +ID+Y + G L+ A + MP E +++W S+++
Sbjct: 226 FQS--KVGFNVILATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIIT 273
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 240/469 (51%), Gaps = 46/469 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
M S + SG A F+++ + D+ +W S+IA + G +E+ ++F M Q+ + P
Sbjct: 271 MFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM-QNKGMHP 329
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR--- 127
D ++ ++ + + GK H G V N+L+SMY K + VA
Sbjct: 330 DGVVISCLINELGKMMLVPQGKAFH-----------GTVCNSLLSMYCKFELLSVAEKLF 378
Query: 128 -RVVEQSEIS---------------------------DLDAIAFTALLDGYAKLGDITPA 159
R+ E+ DL +L+D Y K+GD+T A
Sbjct: 379 CRISEEGNKEAWNTMLKGYGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVA 438
Query: 160 RQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRG 219
++F + +V+ W AMI YV ++ A+ LF M E +P+S TL +L
Sbjct: 439 WRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNT 497
Query: 220 ASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSM 279
SL G+ IH + ++++S+ ALI MYAK G ++ ++++F+ D V W+ M
Sbjct: 498 GSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD-AGNQKDAVCWNVM 556
Query: 280 IIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK 339
I HG E AI LF++M ++P T++ +LSACTH GLVEQG+ F L +
Sbjct: 557 ISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYD 615
Query: 340 IEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAA 399
++P L HY+C++DL R+G L+EA + +MP PD + WG+LLSSC + ++ A
Sbjct: 616 VKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMA 675
Query: 400 ERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
ER + +P N G Y LAN+YSA GKWE+A + R++M + GV K G S
Sbjct: 676 ERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 724
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 180/390 (46%), Gaps = 54/390 (13%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+IS + + G+ +L+ F ++ RDI WNS+I + +G +L F SML S P
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLL-SGQSP 123
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIR-TEFDISGAVQNALISMYAKTGGVEVARRV 129
D FT +SAC L ++G +H +++ FD + AV + + Y+K G ++
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQ----- 178
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
A +FD + +RDVVAWTA+I G+VQNG ++
Sbjct: 179 ----------------------------DACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210
Query: 190 ALELFRAMTKEGP---RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
L M G +PN TL S +L G+ +H A+++ S V ++
Sbjct: 211 GLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSS 270
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
+ + Y+K+G+ A F + + D SW+S+I +LA+ G EE+ ++F +M G+ P
Sbjct: 271 MFSFYSKSGNPSEAYLSFREL-GDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP 329
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
D + +++ + LV QG+++ + + ++ +Y + LL A K
Sbjct: 330 DGVVISCLINELGKMMLVPQGKAFHGTVCN------------SLLSMYCKFELLSVAEKL 377
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAK 396
+ E + AW ++L K Y V L K
Sbjct: 378 FCRISEEGNKEAWNTML---KGYGAVLLGK 404
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
+I V + LI+ YA G + + +VF+L+ D W+S+I A +G ++ F M
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVT-RRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
L G PDH T V+SAC + G L+ + + A + Y + G
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176
Query: 360 LQEAFKFIENMPIEPDVIAWGSLLS 384
LQ+A + MP + DV+AW +++S
Sbjct: 177 LQDACLVFDEMP-DRDVVAWTAIIS 200
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 237/448 (52%), Gaps = 53/448 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS-LK 69
++ + G I A F+ + +RD+V WN++++ Y +G EA L M D + +
Sbjct: 183 LVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFR 242
Query: 70 PDKFTLASTLSACTNLENMNLGKQIHSYIIRT--EFDISGAVQNALISMYAKTGGVEVAR 127
D FT +S LSAC + GKQIH+ + + +FDI A
Sbjct: 243 GDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVA------------------- 279
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
TALL+ YAK ++ AR+ F+S+ R+VV+W AMIVG+ QNG
Sbjct: 280 ----------------TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEG 323
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+A+ LF M E +P+ T A++LS ++ +++ KQ+ A + +SV N+L
Sbjct: 324 REAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSL 383
Query: 248 ITMYAKAGSIDNAQKVFNLICWNN----DTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
I+ Y++ G++ A L+C+++ D VSW+S+I ALA HG EE++++FE ML
Sbjct: 384 ISSYSRNGNLSEA-----LLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-K 437
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
++PD IT++ VLSAC+H GLV++G F M +KIE HY C+IDL GRAG + EA
Sbjct: 438 LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEA 497
Query: 364 FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
+ +MP EP A + C +++ + K A++LL IEP YS L+N Y +
Sbjct: 498 SDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSE 557
Query: 424 GKWEDAAKIRKLMNDRGVK-KEQGSSWL 450
G W AA +RK K G SWL
Sbjct: 558 GHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 170/366 (46%), Gaps = 50/366 (13%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEA------LELFSSMLQDSSLKPDKFTLASTLSA 81
F +M R+IVTWN +I G Q D L + D SL D + +
Sbjct: 94 FDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL--DHVSFMGLIRL 151
Query: 82 CTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAI 141
CT+ NM G Q+H +++ + S
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESS---------------------------------CF 178
Query: 142 AFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM--TK 199
T+L+ Y K G I AR++F+++ +RD+V W A++ YV NG+ D+A L + M K
Sbjct: 179 PSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 200 EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDN 259
R + FT +++LS + GKQIHA + I V AL+ MYAK+ + +
Sbjct: 239 NRFRGDYFTFSSLLS----ACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 260 AQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT 319
A++ F + N VSW++MI+ AQ+G G EA+ LF +ML ++PD +T+ VLS+C
Sbjct: 295 ARECFESMVVRN-VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCA 353
Query: 320 HVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
+ + + M + LS +I Y R G L EA ++ EPD+++W
Sbjct: 354 KFSAIWEIKQ-VQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSW 411
Query: 380 GSLLSS 385
S++ +
Sbjct: 412 TSVIGA 417
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 34/158 (21%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS + +G + AL F + E D+V+W S+I HGF +E+L++F SMLQ L
Sbjct: 381 NSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ--KL 438
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+PDK T LSAC++ G VQ G+ +R
Sbjct: 439 QPDKITFLEVLSACSH---------------------GGLVQE----------GLRCFKR 467
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL 166
+ E +I D +T L+D + G I A + +S+
Sbjct: 468 MTEFYKIEAEDE-HYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 169/382 (44%), Gaps = 55/382 (14%)
Query: 84 NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAF 143
+L++++ KQ H ++++ S +QN L+
Sbjct: 48 SLDHLSDVKQEHGFMVKQGIYNSLFLQNKLL----------------------------- 78
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ--NGLNDDALELFRAMTK-- 199
Y K+ + A ++FD + R++V W +I G +Q N A F +++
Sbjct: 79 ----QAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 200 -EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
+ + ++ + + ++ G Q+H ++ + S +L+ Y K G I
Sbjct: 135 FTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIV 194
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG--IEPDHITYVGVLS 316
A++VF + + D V W++++ + +G+ +EA L + M + D+ T+ +LS
Sbjct: 195 EARRVFEAV-LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLS 253
Query: 317 ACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDV 376
AC +EQG+ ++ V + + ++++Y ++ L +A + E+M + +V
Sbjct: 254 ACR----IEQGKQIHAILFKV-SYQFDIPVATALLNMYAKSNHLSDARECFESMVVR-NV 307
Query: 377 IAWGSLLSS-CKVYKNVDLAKIAAERLLL-IEPDNSGAYSALANVYSACGKWEDAAKIRK 434
++W +++ + + + ++ + LL ++PD A+V S+C K+ +I++
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE----LTFASVLSSCAKFSAIWEIKQ 363
Query: 435 LMNDRGVKKEQGSSWLEIQNEV 456
+ V K+ + +L + N +
Sbjct: 364 V--QAMVTKKGSADFLSVANSL 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 18/228 (7%)
Query: 220 ASLNH---GKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSW 276
ASL+H KQ H ++ S+ + N L+ Y K D+A K+F+ + N V+W
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRN-IVTW 105
Query: 277 SSMIIALAQH-GLGEEAIEL----FEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYF 331
+ +I + Q G L ++L + DH++++G++ CT ++ G
Sbjct: 106 NILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 332 NLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKN 391
LM +E + ++ YG+ GL+ EA + E + ++ D++ W +L+SS +
Sbjct: 166 CLMVK-QGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVLNGM 223
Query: 392 VDLAKIAAERLLLIEPDNS---GAYSALANVYSACGKWEDAAKIRKLM 436
+D A L L+ D + G Y +++ SAC + E +I ++
Sbjct: 224 IDE---AFGLLKLMGSDKNRFRGDYFTFSSLLSAC-RIEQGKQIHAIL 267
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 236/435 (54%), Gaps = 10/435 (2%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
+ A + F+ ++ +N++I H + + F ++ S+ PD T
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 81 ACTNLEN--MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL 138
AC +N + L K +H +R N LI +Y+ ++ A ++ +++
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDEN--PQR 181
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
D + + L+DG K +I AR++FDS+ RD+V+W ++I GY Q +A++LF M
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
G +P++ + + LS ++ GK IH R R + + L+ YAK G ID
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
A ++F L C + +W++MI LA HG GE ++ F KM++ GI+PD +T++ VL C
Sbjct: 302 TAMEIFEL-CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGC 360
Query: 319 THVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE----P 374
+H GLV++ R+ F+ M S++ + + HY CM DL GRAGL++EA + IE MP +
Sbjct: 361 SHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNRE 420
Query: 375 DVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRK 434
++AW LL C+++ N+++A+ AA R+ + P++ G Y + +Y+ +WE+ K+R+
Sbjct: 421 KLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVRE 480
Query: 435 LMN-DRGVKKEQGSS 448
+++ D+ VKK G S
Sbjct: 481 IIDRDKKVKKNVGFS 495
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 162/400 (40%), Gaps = 88/400 (22%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R + ++N++I + + I A F M RD+V+WNS+I+GY Q +EA++LF M
Sbjct: 181 RDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM 240
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ LKPD + STLSAC + GK IH Y R I + L+ YAK G
Sbjct: 241 VA-LGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
++ A +IF+ ++ + W AMI G
Sbjct: 300 IDT---------------------------------AMEIFELCSDKTLFTWNAMITGLA 326
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G + ++ FR M G +P+ T +S+
Sbjct: 327 MHGNGELTVDYFRKMVSSGIKPDGVTF-----------------------------ISVL 357
Query: 243 VGNALITMYAKAGSIDNAQKVFN----LICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
VG + +G +D A+ +F+ L N + + M L + GL EEA E+ E+
Sbjct: 358 VG------CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQ 411
Query: 299 MLALGIEPDH-ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRA 357
M G + + + G+L C G +E N + ++ + + Y M+++Y A
Sbjct: 412 MPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGV--YKVMVEMYANA 469
Query: 358 GLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKI 397
+E K E I+ D KV KNV +K+
Sbjct: 470 ERWEEVVKVRE--IIDRDK----------KVKKNVGFSKV 497
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 255/516 (49%), Gaps = 66/516 (12%)
Query: 21 IDLALAQFQQMSERD-IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
I A F Q +RD NSMI Y + ++ L+ + +++ PD FT +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQ----SEI 135
+C+ + G Q+HS I R F V ++ MYAK G + AR ++ SE+
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 136 S--------------DL------------DAIAFTALLDGYAKLGDITPARQIFDSLRNR 169
S DL D + + A++DG+ K GD+T AR++FD + ++
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 170 DVVAWTAMIVGYVQNGLNDDALELFRAMT--------------------KEGPR------ 203
V+ WT MI GY D A +LF AM +EG R
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 204 ------PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
P+ T+ ++L S +L+ G+ H R + D + V A++ MY+K G I
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
+ A+++F+ + SW++MI A +G A++LF M+ + +PD IT + V++A
Sbjct: 326 EKAKRIFDEMP-EKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITA 383
Query: 318 CTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVI 377
C H GLVE+GR +F++M + + + HY CM+DL GRAG L+EA I NMP EP+ I
Sbjct: 384 CNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGI 442
Query: 378 AWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMN 437
S LS+C YK+++ A+ ++ + +EP N G Y L N+Y+A +W+D ++ +M
Sbjct: 443 ILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMR 502
Query: 438 DRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIY 473
KKE G S +EI V F + D+ HP + I+
Sbjct: 503 KNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIH 538
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 143/306 (46%), Gaps = 36/306 (11%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+++ +W MI + N ID A F M ER++V+WN+MI GY Q+ +E + LF M
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+SL PD T+ S L A ++ ++LG+ H ++ R + D V A++ MY+K G
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+E A+R+ FD + + V +W AMI GY
Sbjct: 325 IEKAKRI---------------------------------FDEMPEKQVASWNAMIHGYA 351
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
NG AL+LF M E +P+ T+ A+++ + G + G++ + I
Sbjct: 352 LNGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIE 410
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
++ + +AGS+ A+ + + + + + SS + A Q+ E A + +K A+
Sbjct: 411 HYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKK--AV 468
Query: 303 GIEPDH 308
+EP +
Sbjct: 469 ELEPQN 474
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 12/243 (4%)
Query: 143 FTALLDGYAKLGDITPARQIFDSLRNRD-VVAWTAMIVGYVQNGLNDDALELFRAMTKEG 201
FT L A I AR++FD RD +MI Y++ D+ L+R + KE
Sbjct: 13 FTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKET 72
Query: 202 P-RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
P++FT + S + G Q+H+ R + V ++ MYAK G + A
Sbjct: 73 CFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCA 132
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
+ F+ + ++ VSW+++I + G + A +LF++M + D + Y ++
Sbjct: 133 RNAFDEMPHRSE-VSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVK 188
Query: 321 VGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWG 380
G + R F+ M HK T+ + MI Y + A K + MP E ++++W
Sbjct: 189 SGDMTSARRLFDEM--THK---TVITWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWN 242
Query: 381 SLL 383
+++
Sbjct: 243 TMI 245
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 226/375 (60%), Gaps = 10/375 (2%)
Query: 109 VQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN 168
V +A+++ Y K + ARR + + D + ++ T L+ GY K + A +F ++
Sbjct: 9 VGSAVLNCYVKLSTLTDARRCFDDTR--DPNVVSITNLISGYLKKHEFEEALSLFRAMPE 66
Query: 169 RDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR-PNSFTLAAMLSVSSRGASLNHGKQ 227
R VV W A+I G+ Q G N++A+ F M +EG PN T ++ S AS GK
Sbjct: 67 RSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKS 126
Query: 228 IHASAIRS-REDLSISVGNALITMYAKAGSIDNAQKVFN-LICWNNDTVSWSSMIIALAQ 285
IHA AI+ + ++ V N+LI+ Y+K G+++++ FN L + VSW+SMI A
Sbjct: 127 IHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAH 186
Query: 286 HGLGEEAIELFEKMLA-LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTL 344
+G GEEA+ +FEKM+ + P+++T +GVL AC H GL+++G YFN + + +P L
Sbjct: 187 NGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNL 245
Query: 345 ---SHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAER 401
HYACM+D+ R+G +EA + I++MP++P + W +LL C+++ N LAK+AA +
Sbjct: 246 LELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASK 305
Query: 402 LLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGA 461
+L ++P + +Y L+N YSA W++ + IR+ M + G+K+ G SW+E+++++ +F
Sbjct: 306 ILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVN 365
Query: 462 EDSLHPQKDEIYKMM 476
D + KDE+Y+M+
Sbjct: 366 ADKNNELKDEVYRML 380
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 131/270 (48%), Gaps = 40/270 (14%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFS 60
R ++ S +IS ++ + AL+ F+ M ER +VTWN++I G++Q G ++EA+ F
Sbjct: 34 RDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFV 93
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIR---TEFDISGAVQNALISMY 117
ML++ + P++ T ++A +N+ + GK IH+ I+ F++ V N+LIS Y
Sbjct: 94 DMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNV--FVWNSLISFY 151
Query: 118 AKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAM 177
+K G +E + +AF L + R++V+W +M
Sbjct: 152 SKCGNMEDS-------------LLAFNKLEE------------------EQRNIVSWNSM 180
Query: 178 IVGYVQNGLNDDALELFRAMTKE-GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR 236
I GY NG ++A+ +F M K+ RPN+ T+ +L + + G A+
Sbjct: 181 IWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDY 240
Query: 237 ED---LSISVGNALITMYAKAGSIDNAQKV 263
+D L + ++ M +++G A+++
Sbjct: 241 DDPNLLELEHYACMVDMLSRSGRFKEAEEL 270
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 229/421 (54%), Gaps = 7/421 (1%)
Query: 40 NSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYII 99
N + Y K+AL + +L+ PD +T S +S ++ GK H I
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILR-FGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAI 145
Query: 100 RTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPA 159
+ D VQN+L+ MY G +++A+++ EI D +++ +++ G + GD+ A
Sbjct: 146 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLF--VEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 160 RQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRG 219
++FD + ++++++W MI Y+ ++ LFR M + G + N TL +L+ R
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 220 ASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSM 279
A L G+ +HAS IR+ + S+ + ALI MY K + A+++F+ + N V+W+ M
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK-VTWNVM 322
Query: 280 IIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK 339
I+A HG E +ELFE M+ + PD +T+VGVL C GLV QG+SY++LM +
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 340 IEPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKNVDLAK 396
I+P H CM +LY AG +EA + ++N+P + P+ W +LLSS + N L +
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGE 442
Query: 397 IAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEV 456
A+ L+ +P N Y L N+YS G+WED ++R+++ +R + + G ++++ V
Sbjct: 443 SIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIV 502
Query: 457 H 457
H
Sbjct: 503 H 503
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 37/262 (14%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R I SWN +I+ + +G + A F +M +++I++WN MI+ Y ++ LF M
Sbjct: 182 RDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM 241
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ + + ++ TL L+AC + G+ +H+ +IRT + S + ALI MY K
Sbjct: 242 VR-AGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKE 300
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
V +ARR IFDSL R+ V W MI+ +
Sbjct: 301 VGLARR---------------------------------IFDSLSIRNKVTWNVMILAHC 327
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G + LELF AM RP+ T +L +R ++ G Q + S + + +
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQG-QSYYSLMVDEFQIKPN 386
Query: 243 VGN--ALITMYAKAGSIDNAQK 262
G+ + +Y+ AG + A++
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEE 408
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 232/467 (49%), Gaps = 54/467 (11%)
Query: 25 LAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTN 84
+ +FQ ++R + + G G KEA+ L L S L+ + T A L C
Sbjct: 65 IGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGL----LWSSGLQVEPETYAVLLQECKQ 120
Query: 85 LENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFT 144
+ GK+IH+ + F ++ ++ L+ +YA
Sbjct: 121 RKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA-------------------------- 154
Query: 145 ALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRP 204
L D+ P W AMI GYVQ GL + L ++ M + P
Sbjct: 155 --------LSDLIP---------------WNAMISGYVQKGLEQEGLFIYYDMRQNRIVP 191
Query: 205 NSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF 264
+ +T A++ S L HGK+ HA I+ +I V +AL+ MY K S + +VF
Sbjct: 192 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 251
Query: 265 NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLV 324
+ + N ++W+S+I HG E ++ FEKM G P+ +T++ VL+AC H GLV
Sbjct: 252 DQLSTRN-VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLV 310
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
++G +F M + IEP HYA M+D GRAG LQEA++F+ P + WGSLL
Sbjct: 311 DKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLG 370
Query: 385 SCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
+C+++ NV L ++AA + L ++P N G Y AN Y++CG E A+K+R+ M + GVKK+
Sbjct: 371 ACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 430
Query: 445 QGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPD 491
G S +E+Q EVH F +D+ H ++IYK + ++ + + PD
Sbjct: 431 PGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 477
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/430 (33%), Positives = 233/430 (54%), Gaps = 43/430 (10%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F+ + E+D+VTWN+MI+ YNQ K A+ ++ M +KPD+FT S L+ +L+
Sbjct: 346 FESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM-HIIGVKPDEFTFGSLLATSLDLDV 404
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+ + + + II+ F +S + EIS+ AL+
Sbjct: 405 LEM---VQACIIK--FGLSSKI------------------------EISN-------ALI 428
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR--PN 205
Y+K G I A +F+ +++++W A+I G+ NG + LE F + + R P+
Sbjct: 429 SAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPD 488
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
++TL+ +LS+ +SL G Q HA +R + +GNALI MY++ G+I N+ +VFN
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSACTHVGLV 324
+ D VSW+S+I A ++HG GE A+ ++ M G + PD T+ VLSAC+H GLV
Sbjct: 549 QMS-EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF--IENMPIEPDVIAWGSL 382
E+G FN M H + + H++C++DL GRAG L EA I I V W +L
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWAL 667
Query: 383 LSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
S+C + ++ L K+ A+ L+ E D+ Y L+N+Y+ G W++A + R+ +N G
Sbjct: 668 FSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAM 727
Query: 443 KEQGSSWLEI 452
K++G SW+ +
Sbjct: 728 KQRGCSWMRL 737
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 224/443 (50%), Gaps = 48/443 (10%)
Query: 36 IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIH 95
++ N + G + G ++ AL+LF+ + + ++L+PD+++++ ++ +L + G Q+H
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 96 SYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGD 155
Y IR+ V N L+S+Y + G + ++ + EI + D ++T LL KLGD
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFD--EIDEPDVYSWTTLLSASFKLGD 138
Query: 156 ITPARQIFDSLRNRDVVA-WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
I A ++FD + RD VA W AMI G ++G ++ ++ELFR M K G R + F A +LS
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI-CWNNDT 273
+ G SL+ GKQ+H+ I++ ++ SV NALITMY + +A VF D
Sbjct: 199 MCDYG-SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 274 VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT--------HVGLVE 325
V+++ +I LA +E++ +F KML + P +T+V V+ +C+ H ++
Sbjct: 258 VTFNVVIDGLAGFK-RDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIK 316
Query: 326 QGRSYFNLMA--------------SVHKI-----EPTLSHYACMIDLYGRAGLLQEAFKF 366
G + L++ + HK+ E L + MI Y +A L + A
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 367 IENMPI---EPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL---IEPDNSGAYSALANVY 420
+ M I +PD +GSLL++ +++ + + L IE N AL + Y
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISN-----ALISAY 431
Query: 421 SACGKWEDAAKIRKLMNDRGVKK 443
S G+ E A L+ +R ++K
Sbjct: 432 SKNGQIEKA----DLLFERSLRK 450
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 217/476 (45%), Gaps = 82/476 (17%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERD-IVTWNSMIAGYNQHGFDKEALELFSSML 63
+ SW ++S G I+ A F +M ERD + WN+MI G + G+ + ++ELF M
Sbjct: 123 VYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM- 181
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
++ DKF A+ LS C + +++ GKQ+HS +I+ F I+ +V NALI+MY V
Sbjct: 182 HKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
A V E+++++ D + F ++DG A G+ +
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLA----------------------------GFKR 272
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
D++L +FR M + RP T +++ S A G Q+H AI++ + V
Sbjct: 273 ----DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLV 325
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
NA +TMY+ A KVF + D V+W++MI + Q LG+ A+ ++++M +G
Sbjct: 326 SNATMTMYSSFEDFGAAHKVFESL-EEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
++PD T+ +L+ + ++E ++ KIE + +I Y + G +++A
Sbjct: 385 VKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS----NALISAYSKNGQIEKA 440
Query: 364 FKFIENMPIEPDVIAWGSLLS---------------SC----------KVYKNVDLAKIA 398
E + ++I+W +++S SC Y L I
Sbjct: 441 DLLFER-SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 399 AERLLLIEPDNSGAY-------------SALANVYSACGKWEDAAKIRKLMNDRGV 441
L+ + AY +AL N+YS CG +++ ++ M+++ V
Sbjct: 500 VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV 555
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 177/382 (46%), Gaps = 50/382 (13%)
Query: 9 NIMISLHMNSGRIDLALAQFQQ--MSERDIVTWNSMIAGYNQHGFDK-EALELFSSMLQD 65
N +I+++ N + A F++ ++ RD VT+N +I G GF + E+L +F ML+
Sbjct: 228 NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLE- 284
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
+SL+P T S + +C+ +G Q+H I+T ++ V NA ++MY+
Sbjct: 285 ASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSS------ 335
Query: 126 ARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNG 185
D A ++F+SL +D+V W MI Y Q
Sbjct: 336 ---------------------------FEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK 368
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
L A+ +++ M G +P+ FT ++L+ S L+ + + A I+ I + N
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLLATS---LDLDVLEMVQACIIKFGLSSKIEISN 425
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML--ALG 303
ALI+ Y+K G I+ A +F N +SW+++I +G E +E F +L +
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKN-LISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
I PD T +LS C + G + + + TL A +I++Y + G +Q +
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA-LINMYSQCGTIQNS 543
Query: 364 FKFIENMPIEPDVIAWGSLLSS 385
+ M E DV++W SL+S+
Sbjct: 544 LEVFNQMS-EKDVVSWNSLISA 564
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 133/241 (55%), Gaps = 12/241 (4%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ-DSS 67
N +IS + +G+I+ A F++ +++++WN++I+G+ +GF E LE FS +L+ +
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
+ PD +TL++ LS C + ++ LG Q H+Y++R + NALI+MY++ G ++ +
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR-----DVVAWTAMIVGYV 182
V Q +S+ D +++ +L+ Y++ G+ A + ++++ D ++A++
Sbjct: 545 EVFNQ--MSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACS 602
Query: 183 QNGLNDDALELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGK---QIHASAIRSRED 238
GL ++ LE+F +M + G N + ++ + R L+ + +I I SR D
Sbjct: 603 HAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD 662
Query: 239 L 239
+
Sbjct: 663 V 663
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I+++ G I +L F QMSE+D+V+WNS+I+ Y++HG + A+ + +M + +
Sbjct: 528 NALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKV 587
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN-----ALISMYAKTGGV 123
PD T ++ LSAC++ + G +I + ++ + G ++N L+ + + G +
Sbjct: 588 IPDAATFSAVLSACSHAGLVEEGLEIFNSMV----EFHGVIRNVDHFSCLVDLLGRAGHL 643
Query: 124 EVARRVVEQSEISDLDAI-AFTALLDGYAKLGDITPARQIFDSLRNR---DVVAWTAMIV 179
+ A +V+ SE + + + AL A GD+ + + L + D + +
Sbjct: 644 DEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSN 703
Query: 180 GYVQNGLNDDALELFRAMTKEGP 202
Y G+ +A E RA+ G
Sbjct: 704 IYAGAGMWKEAEETRRAINMIGA 726
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 262/474 (55%), Gaps = 42/474 (8%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ + G + A F ++ ++V+WNS+I+G +++GF ++A+ ++ +L+ S+
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+PD++T ++ +SA E GK +H + + ++ S V L+SMY K E A++
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
V + + + D + +T ++ G+++LG+ ++
Sbjct: 459 VFDV--MKERDVVLWTEMIVGHSRLGN-------------------------------SE 485
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
A++ F M +E R + F+L++++ S A L G+ H AIR+ D +SV AL+
Sbjct: 486 LAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALV 545
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MY K G + A+ +F+L N D W+SM+ A +QHG+ E+A+ FE++L G PD
Sbjct: 546 DMYGKNGKYETAETIFSLAS-NPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDA 604
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
+TY+ +L+AC+H G QG+ +N M I+ HY+CM++L +AGL+ EA + IE
Sbjct: 605 VTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIE 663
Query: 369 NMPIEPDVIA-WGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
P + W +LLS+C +N+ + AAE++L ++P+++ + L+N+Y+ G+WE
Sbjct: 664 QSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWE 723
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEI-QNEVHIFGAEDSLHPQ-----KDEIYKM 475
D A++R+ + K+ G SW+E+ N +F + D +P+ +DE+ ++
Sbjct: 724 DVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRL 777
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 209/439 (47%), Gaps = 47/439 (10%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ + G ++ A F ++ RD V WN+MI G ++ ++ L F +ML S + P
Sbjct: 240 VLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLM-SGVDP 298
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+FT + L+ C+ L + +LGK IH+ II ++ + NAL
Sbjct: 299 TQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNAL----------------- 341
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
LD Y GD+ A +F + N ++V+W ++I G +NG + A
Sbjct: 342 ----------------LDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQA 385
Query: 191 LELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
+ ++R + + PRP+ +T +A +S ++ HGK +H + + S+ VG L++
Sbjct: 386 MLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLS 445
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MY K ++AQKVF+++ D V W+ MI+ ++ G E A++ F +M D
Sbjct: 446 MYFKNREAESAQKVFDVM-KERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
+ V+ AC+ + ++ QG F+ +A + +S ++D+YG+ G + A + I +
Sbjct: 505 SLSSVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFS 562
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSGAYSALANVYSACGKWE 427
+ PD+ W S+L + + V+ A E++L PD S LA AC
Sbjct: 563 LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA----ACSHRG 618
Query: 428 DAAKIRKLMNDRGVKKEQG 446
+ + L N KEQG
Sbjct: 619 STLQGKFLWNQ---MKEQG 634
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 206/431 (47%), Gaps = 50/431 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHG-FDKEALELFSSMLQDSS 67
N +IS+++ G ++ A F +M R++V++N++ + Y+++ F A L + M +
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY- 194
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
+KP+ T S + C LE++ +G ++S II+ + + VQ +++ MY+
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSC------- 247
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
GD+ AR+IFD + NRD VAW MIVG ++N
Sbjct: 248 --------------------------GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKI 281
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+D L FR M G P FT + +L+ S+ S + GK IHA I S + + NAL
Sbjct: 282 EDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNAL 341
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI-EP 306
+ MY G + A VF I N + VSW+S+I +++G GE+A+ ++ ++L + P
Sbjct: 342 LDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKI--EPTLSHYACMIDLYGRAGLLQEAF 364
D T+ +SA G+ L V K+ E ++ ++ +Y + + A
Sbjct: 401 DEYTFSAAISATAEPERFVHGKL---LHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQ 457
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLA-KIAAERLLLIEPDNSGAYSALANVYSAC 423
K + M E DV+ W ++ N +LA + E + E + S +S L++V AC
Sbjct: 458 KVFDVMK-ERDVVLWTEMIVGHSRLGNSELAVQFFIE--MYREKNRSDGFS-LSSVIGAC 513
Query: 424 GKWEDAAKIRK 434
D A +R+
Sbjct: 514 ---SDMAMLRQ 521
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 199/434 (45%), Gaps = 71/434 (16%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS+++ ++ A F +M +R+IVT + A + + L S +++ S
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFE---YVSMGSSLHSQIIKLGSF 82
Query: 69 KPDKFT----LASTL----SACTNLENMNLGKQIHSYIIR------TEFDISGAVQNALI 114
+ F +AS++ C ++ + +QIH+ ++ TE S N LI
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE---SPYANNNLI 139
Query: 115 SMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAW 174
SMY + G +E AR++FD + +R+VV++
Sbjct: 140 SMYVRCGSLE---------------------------------QARKVFDKMPHRNVVSY 166
Query: 175 TAMIVGYVQNG-LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
A+ Y +N A L M E +PNS T +++ V + + G +++ I
Sbjct: 167 NALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQII 226
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN-DTVSWSSMIIALAQHGLGEEA 292
+ ++ V +++ MY+ G +++A+++F+ C NN D V+W++MI+ ++ E+
Sbjct: 227 KLGYSDNVVVQTSVLGMYSSCGDLESARRIFD--CVNNRDAVAWNTMIVGSLKNDKIEDG 284
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA---C 349
+ F ML G++P TY VL+ C+ +G G+ L+ + + +L+
Sbjct: 285 LMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK----LIHARIIVSDSLADLPLDNA 340
Query: 350 MIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLI---E 406
++D+Y G ++EAF ++ P++++W S++S C + A + RLL +
Sbjct: 341 LLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 407 PDN---SGAYSALA 417
PD S A SA A
Sbjct: 400 PDEYTFSAAISATA 413
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 42/262 (16%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
RS+ ++S++ + + A F M ERD+V W MI G+++ G + A++ F M
Sbjct: 435 RSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ + + D F+L+S + AC+++ + G+ H IRT FD +V AL+ MY K G
Sbjct: 495 YREKN-RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
E A IF N D+ W +M+ Y
Sbjct: 554 YET---------------------------------AETIFSLASNPDLKCWNSMLGAYS 580
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGK----QIHASAIRSRED 238
Q+G+ + AL F + + G P++ T ++L+ S S GK Q+ I++
Sbjct: 581 QHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKA--- 637
Query: 239 LSISVGNALITMYAKAGSIDNA 260
+ ++ + +KAG +D A
Sbjct: 638 -GFKHYSCMVNLVSKAGLVDEA 658
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 231/435 (53%), Gaps = 38/435 (8%)
Query: 24 ALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACT 83
A F QM ++ V+W +MI+G + + ++LF +M Q +L+P++ TL S L AC
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM-QRENLRPNRVTLLSVLPACV 262
Query: 84 NLE-NMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIA 142
L +L K+IH + R G R+
Sbjct: 263 ELNYGSSLVKEIHGFSFRH--------------------GCHADERLT------------ 290
Query: 143 FTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP 202
A + Y + G+++ +R +F++ + RDVV W++MI GY + G + + L M KEG
Sbjct: 291 -AAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGI 349
Query: 203 RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQK 262
NS TL A++S + L+ +H+ ++ I +GNALI MYAK GS+ A++
Sbjct: 350 EANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAARE 409
Query: 263 VFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
VF + D VSWSSMI A HG G EA+E+F+ M+ G E D + ++ +LSAC H G
Sbjct: 410 VFYEL-TEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAG 468
Query: 323 LVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL 382
LVE+ ++ F H + TL HYAC I+L GR G + +AF+ NMP++P W SL
Sbjct: 469 LVEEAQTIFTQAGKYH-MPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSL 527
Query: 383 LSSCKVYKNVDLA-KIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
LS+C+ + +D+A KI A L+ EPDN Y L+ +++ G + A ++R++M R +
Sbjct: 528 LSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKL 587
Query: 442 KKEQGSSWLEIQNEV 456
K G S +E + ++
Sbjct: 588 NKCYGFSKIEPELQI 602
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 175/382 (45%), Gaps = 44/382 (11%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS++ R F +M RD V++ S+I Q G EA++L M +
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 69 KPDKFTLASTLSACTNL-ENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
P +AS L+ CT + + + + H+ ++ V
Sbjct: 146 -PKSELVASLLALCTRMGSSSKVARMFHALVL-------------------------VDE 179
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
R+ E +S TAL+D Y K D A +FD + ++ V+WTAMI G V N
Sbjct: 180 RMQESVLLS-------TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNY 232
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHG----KQIHASAIRSREDLSISV 243
+ ++LFRAM +E RPN TL LSV LN+G K+IH + R +
Sbjct: 233 EMGVDLFRAMQRENLRPNRVTL---LSVLPACVELNYGSSLVKEIHGFSFRHGCHADERL 289
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
A +TMY + G++ ++ +F D V WSSMI A+ G E + L +M G
Sbjct: 290 TAAFMTMYCRCGNVSLSRVLFE-TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEG 348
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
IE + +T + ++SACT+ L+ + + + + L A +ID+Y + G L A
Sbjct: 349 IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNA-LIDMYAKCGSLSAA 407
Query: 364 FKFIENMPIEPDVIAWGSLLSS 385
+ + E D+++W S++++
Sbjct: 408 REVFYELT-EKDLVSWSSMINA 428
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 46/343 (13%)
Query: 12 ISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPD 71
++++ G + L+ F+ RD+V W+SMI+GY + G E + L + M ++ ++ +
Sbjct: 294 MTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE-GIEAN 352
Query: 72 KFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVE 131
TL + +SACTN ++ +HS I++ F + NALI MYAK G + AR V
Sbjct: 353 SVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVF- 411
Query: 132 QSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDAL 191
E+++ D ++++++++ Y +G +AL
Sbjct: 412 -YELTEKDLVSWSSMINAYG-------------------------------LHGHGSEAL 439
Query: 192 ELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
E+F+ M K G + A+LS + + + I A + +++ I +
Sbjct: 440 EIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLL 499
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH-IT 310
+ G ID+A +V + WSS++ A HG + A ++ L + EPD+
Sbjct: 500 GRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANEL-MKSEPDNPAN 558
Query: 311 YV---------GVLSACTHVGLVEQGRSYFNLMASVHKIEPTL 344
YV G A V V Q R N KIEP L
Sbjct: 559 YVLLSKIHTESGNYHAAEEVRRVMQRRK-LNKCYGFSKIEPEL 600
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 50/365 (13%)
Query: 29 QQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFT--LASTLSACT-NL 85
+ +S R + + + G F EAL L+ L+ SL + FT L S + AC
Sbjct: 3 RALSSRLNLELGNKLKGLVSDQFYDEALRLYK--LKIHSLGTNGFTAILPSVIKACAFQQ 60
Query: 86 ENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTA 145
E LG Q+H ++ D V N+LISM
Sbjct: 61 EPFLLGAQLHCLCLKAGADCDTVVSNSLISM----------------------------- 91
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
YAK R++FD + +RD V++ ++I Q+GL +A++L + M G P
Sbjct: 92 ----YAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPK 147
Query: 206 SFTLAAMLSVSSR-GASLNHGKQIHASA-IRSREDLSISVGNALITMYAKAGSIDNAQKV 263
S +A++L++ +R G+S + HA + R S+ + AL+ MY K A V
Sbjct: 148 SELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHV 207
Query: 264 FNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHV-- 321
F+ + N+ VSW++MI + E ++LF M + P+ +T + VL AC +
Sbjct: 208 FDQMEVKNE-VSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNY 266
Query: 322 --GLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
LV++ F+ H E A + +Y R G + + E + DV+ W
Sbjct: 267 GSSLVKEIHG-FSFRHGCHADERLT---AAFMTMYCRCGNVSLSRVLFETSKVR-DVVMW 321
Query: 380 GSLLS 384
S++S
Sbjct: 322 SSMIS 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 11/222 (4%)
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNH-----GKQIHASAIR 234
G V + D+AL L++ + N FT A+L + + G Q+H ++
Sbjct: 19 GLVSDQFYDEALRLYK-LKIHSLGTNGFT--AILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIE 294
+ D V N+LI+MYAK +KVF+ + + DTVS+ S+I + Q GL EA++
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEM-LHRDTVSYCSIINSCCQDGLLYEAMK 134
Query: 295 LFEKMLALGIEPDHITYVGVLSACTHVGLVEQ-GRSYFNLMASVHKIEPTLSHYACMIDL 353
L ++M G P +L+ CT +G + R + L+ +++ ++ ++D+
Sbjct: 135 LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDM 194
Query: 354 YGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
Y + AF + M ++ +V +W +++S C +N ++
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEV-SWTAMISGCVANQNYEMG 235
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ G + A F +++E+D+V+W+SMI Y HG EALE+F M++
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH- 450
Query: 69 KPDKFTLASTLSACTN 84
+ D + LSAC +
Sbjct: 451 EVDDMAFLAILSACNH 466
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 254/448 (56%), Gaps = 22/448 (4%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+IS++ G + A F +M ER++ TWN+MI GY +G +A+ L S + ++ S+
Sbjct: 6 LISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG---DAV-LASGLFEEISVCR 61
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVARRV 129
+ T + + +++ R F++ + ++ +Y +E AR+
Sbjct: 62 NTVTWIEMIKGYGKRIEIEKARELFE---RMPFELKNVKAWSVMLGVYVNNRKMEDARKF 118
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
E +I + +A ++ ++ GY ++GD+ AR IF + RD+V W +I GY QNG +DD
Sbjct: 119 FE--DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDD 176
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
A++ F M EG P++ T++++LS ++ L+ G+++H+ +L+ V NALI
Sbjct: 177 AIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALID 236
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MYAK G ++NA VF I + +SMI LA HG G+EA+E+F M +L ++PD I
Sbjct: 237 MYAKCGDLENATSVFESISVRS-VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEI 295
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T++ VL+AC H G + +G F+ M + ++P + H+ C+I L GR+G L+EA++ ++
Sbjct: 296 TFIAVLTACVHGGFLMEGLKIFSEMKT-QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKE 354
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNS--GAYS-----ALANVYSA 422
M ++P+ G+LL +CKV+ + ++A+ + + +IE S +YS +++N+Y+
Sbjct: 355 MHVKPNDTVLGALLGACKVHMDTEMAE---QVMKIIETAGSITNSYSENHLASISNLYAH 411
Query: 423 CGKWEDAAKIRKLMNDRGVKKEQGSSWL 450
+W+ A +R M RG++K G S L
Sbjct: 412 TERWQTAEALRVEMEKRGLEKSPGLSSL 439
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 125/268 (46%), Gaps = 35/268 (13%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
W++M+S + G + A A F ++ RD+V WN++IAGY Q+G+ +A++ F +M Q
Sbjct: 130 WSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM-QGEG 188
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
+PD T++S LSAC +++G+++HS I +++ V NALI MYAK
Sbjct: 189 YEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC------- 241
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
GD+ A +F+S+ R V +MI +G
Sbjct: 242 --------------------------GDLENATSVFESISVRSVACCNSMISCLAIHGKG 275
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
+ALE+F M +P+ T A+L+ G L G +I + ++ L
Sbjct: 276 KEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCL 335
Query: 248 ITMYAKAGSIDNAQK-VFNLICWNNDTV 274
I + ++G + A + V + NDTV
Sbjct: 336 IHLLGRSGKLKEAYRLVKEMHVKPNDTV 363
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 140/286 (48%), Gaps = 20/286 (6%)
Query: 109 VQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR- 167
V ++LISMY K G V AR+V + E+ + + + A++ GY GD A +F+ +
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFD--EMPERNVATWNAMIGGYMSNGDAVLASGLFEEISV 59
Query: 168 NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQ 227
R+ V W MI GY + + A ELF M E ++++ ML V + ++
Sbjct: 60 CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV--MLGVYVNNRKMEDARK 117
Query: 228 IHASAIRSREDL---SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALA 284
ED+ + V + +++ Y + G + A+ +F + + D V W+++I A
Sbjct: 118 FF-------EDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV-FARDLVIWNTLIAGYA 169
Query: 285 QHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK-IEPT 343
Q+G ++AI+ F M G EPD +T +LSAC G ++ GR +L+ H+ IE
Sbjct: 170 QNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN--HRGIELN 227
Query: 344 LSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
+ID+Y + G L+ A E++ + V S++S ++
Sbjct: 228 QFVSNALIDMYAKCGDLENATSVFESISVR-SVACCNSMISCLAIH 272
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 244/478 (51%), Gaps = 38/478 (7%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I++++ G+ + + + + +D+V W MI+G + G ++AL +FS MLQ S
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS 345
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ +AS +++C L + +LG +H Y++R + + N+LI+M
Sbjct: 346 SE-AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITM-------------- 390
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
YAK G + + IF+ + RD+V+W A+I GY QN A
Sbjct: 391 -------------------YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431
Query: 191 LELFRAMT-KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
L LF M K + +SFT+ ++L S +L GK IH IRS V AL+
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MY+K G ++ AQ+ F+ I W D VSW +I HG G+ A+E++ + L G+EP+H+
Sbjct: 492 MYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHV 550
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
++ VLS+C+H G+V+QG F+ M +EP H AC++DL RA +++AFKF +
Sbjct: 551 IFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE 610
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
P + G +L +C+ ++ I E ++ ++P ++G Y L + ++A +W+D
Sbjct: 611 NFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDV 670
Query: 430 AKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLG 487
++ M G+KK G S +E+ + F + H D+ ++ + E+ + G
Sbjct: 671 SESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 186/405 (45%), Gaps = 64/405 (15%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+++L+ G + A F++M ERD+V W +MI Y++ G EA L + M + +KP
Sbjct: 87 LVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEM-RFQGIKP 145
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
TL LS + + +H + + FD AV N+++++Y K V
Sbjct: 146 GPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHV------- 195
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
GD A+ +FD + RD+V+W MI GY G +
Sbjct: 196 -----------------------GD---AKDLFDQMEQRDMVSWNTMISGYASVGNMSEI 229
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L+L M +G RP+ T A LSVS L G+ +H +++ D+ + + ALITM
Sbjct: 230 LKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITM 289
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y K G + + +V I N D V W+ MI L + G E+A+ +F +ML G +
Sbjct: 290 YLKCGKEEASYRVLETI-PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKI---------EPTLSHYACMIDLYGRAGLLQ 361
V+++C +G F+L ASVH P L+ +I +Y + G L
Sbjct: 349 IASVVASCAQLG-------SFDLGASVHGYVLRHGYTLDTPALNS---LITMYAKCGHLD 398
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE 406
++ E M E D+++W +++S +NVDL K LLL E
Sbjct: 399 KSLVIFERMN-ERDLVSWNAIISG--YAQNVDLCK----ALLLFE 436
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 180/388 (46%), Gaps = 44/388 (11%)
Query: 39 WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
+NS I + HG K+ L FSSML + L PD FT S L AC +L+ ++ G IH +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANK-LLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 99 IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITP 158
+ F + ++L+++YA K G +
Sbjct: 73 LVNGFSSDFYISSSLVNLYA---------------------------------KFGLLAH 99
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR 218
AR++F+ +R RDVV WTAMI Y + G+ +A L M +G +P TL MLS
Sbjct: 100 ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE 159
Query: 219 GASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSS 278
L + +H A+ D I+V N+++ +Y K + +A+ +F+ + D VSW++
Sbjct: 160 ITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM-EQRDMVSWNT 215
Query: 279 MIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS-YFNLMASV 337
MI A G E ++L +M G+ PD T+ LS + +E GR + ++ +
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTG 275
Query: 338 HKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKI 397
++ L +I +Y + G + +++ +E +P DV+ W ++S + A I
Sbjct: 276 FDVDMHLK--TALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAEKALI 332
Query: 398 AAERLLLIEPDNSGAYSALANVYSACGK 425
+L D S A+A+V ++C +
Sbjct: 333 VFSEMLQSGSDLSS--EAIASVVASCAQ 358
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 40/260 (15%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I+++ G +D +L F++M+ERD+V+WN++I+GY Q+ +AL LF M +
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ D FT+ S L AC++ + +GK IH +IR+ V AL+ MY+K G +E A+R
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
FDS+ +DVV+W +I GY +G D
Sbjct: 505 C---------------------------------FDSISWKDVVSWGILIAGYGFHGKGD 531
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--- 245
ALE++ G PN A+LS S + G +I +S +R D + +
Sbjct: 532 IALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR---DFGVEPNHEHL 588
Query: 246 -ALITMYAKAGSIDNAQKVF 264
++ + +A I++A K +
Sbjct: 589 ACVVDLLCRAKRIEDAFKFY 608
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 235/433 (54%), Gaps = 37/433 (8%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++SL+ G+++ A QF M ERD+V+WN+MI GY + + LF ML + KP
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK-KP 212
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
D FT S L A ++ + + ++H I+ F S A+ +L++ Y K G + A ++
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
E ++ DL ++ TAL+ G+++ QN DA
Sbjct: 273 EGTKKRDL--LSCTALITGFSQ------------------------------QNNCTSDA 300
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLSISVGNALIT 249
++F+ M + + + +++ML + + AS+ G+QIH A++S + +++GN+LI
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLID 360
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MYAK+G I++A F + D SW+S+I +HG E+AI+L+ +M I+P+ +
Sbjct: 361 MYAKSGEIEDAVLAFEEM-KEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDV 419
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T++ +LSAC+H G E G ++ M + H IE H +C+ID+ R+G L+EA+ I +
Sbjct: 420 TFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS 479
Query: 370 MP--IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWE 427
+ WG+ L +C+ + NV L+K+AA +LL +EP Y LA+VY+A G W+
Sbjct: 480 KEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWD 539
Query: 428 DAAKIRKLMNDRG 440
+A RKLM + G
Sbjct: 540 NALNTRKLMKESG 552
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 214/444 (48%), Gaps = 47/444 (10%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
+++I L++ G + A F ++S+RD+V+W +MI+ +++ G+ +AL LF M ++ +
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED-V 109
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
K ++FT S L +C +L + G QIH G+V+ G + R
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIH-----------GSVEKG------NCAGNLIVR- 151
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+ALL YA+ G + AR FDS++ RD+V+W AMI GY N D
Sbjct: 152 ---------------SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACAD 196
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+ LF+ M EG +P+ FT ++L S L ++H AI+ S ++ +L+
Sbjct: 197 TSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLV 256
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALA-QHGLGEEAIELFEKMLALGIEPD 307
Y K GS+ NA K+ D +S +++I + Q+ +A ++F+ M+ + + D
Sbjct: 257 NAYVKCGSLANAWKLHEGT-KKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMD 315
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
+ +L CT + V GR +I ++ +ID+Y ++G +++A
Sbjct: 316 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 368 ENMPIEPDVIAWGSLLSSCKVYKNVDLA-----KIAAERLLLIEPDNSGAYSALANVYSA 422
E M E DV +W SL++ + N + A ++ ER I+P N + +L + S
Sbjct: 376 EEMK-EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER---IKP-NDVTFLSLLSACSH 430
Query: 423 CGKWEDAAKIRKLM-NDRGVKKEQ 445
G+ E KI M N G++ +
Sbjct: 431 TGQTELGWKIYDTMINKHGIEARE 454
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ SG I+ A+ F++M E+D+ +W S+IAGY +HG ++A++L++ M + +
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM-EHERI 414
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTE-FDISGAVQNALISMYAKTGGVEVAR 127
KP+ T S LSAC++ LG +I+ +I + + +I M A++G +E A
Sbjct: 415 KPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAY 474
Query: 128 RVVEQSE-ISDLDAIAFTALLDGYAKLGDI----TPARQIFDSLRNRDVVAWTAMIVGYV 182
++ E I L + + A LD + G++ A Q+ S+ R V + + Y
Sbjct: 475 ALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLL-SMEPRKPVNYINLASVYA 533
Query: 183 QNGLNDDALELFRAMTKEG 201
NG D+AL + M + G
Sbjct: 534 ANGAWDNALNTRKLMKESG 552
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 50/323 (15%)
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
L P + A L + N++ L IH I F + +++ LI +Y K G V+ AR
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQLL--LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHAR 67
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
++ ++ IS D +++TA++ +++ G +
Sbjct: 68 KLFDR--ISKRDVVSWTAMISRFSRC-------------------------------GYH 94
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
DAL LF+ M +E + N FT ++L L G QIH S + ++ V +AL
Sbjct: 95 PDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSAL 154
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+++YA+ G ++ A+ F+ + D VSW++MI + + + LF+ ML G +PD
Sbjct: 155 LSLYARCGKMEEARLQFDSM-KERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSH------YACMIDLYGRAGLLQ 361
T+ +L A V +E +++ +H + L +++ Y + G L
Sbjct: 214 CFTFGSLLRASIVVKCLE-------IVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 362 EAFKFIENMPIEPDVIAWGSLLS 384
A+K E + D+++ +L++
Sbjct: 267 NAWKLHEGTK-KRDLLSCTALIT 288
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 228/421 (54%), Gaps = 15/421 (3%)
Query: 36 IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIH 95
+++ ++ Y G ++AL LF M +L D + L +C LG +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 96 SYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGD 155
++ +++ F + V AL+ MY K V AR++ + EI +A+ + A++ Y G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFD--EIPQRNAVVWNAMISHYTHCGK 129
Query: 156 ITPARQIFDSLRNRDVV----AWTAMIVGYVQNGLNDD---ALELFRAMTKEGPRPNSFT 208
+ A ++++++ DV+ ++ A+I G V G D A+E +R M + +PN T
Sbjct: 130 VKEAVELYEAM---DVMPNESSFNAIIKGLV--GTEDGSYRAIEFYRKMIEFRFKPNLIT 184
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC 268
L A++S S + K+IH+ A R+ + + + L+ Y + GSI Q VF+ +
Sbjct: 185 LLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM- 243
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR 328
+ D V+WSS+I A A HG E A++ F++M + PD I ++ VL AC+H GL ++
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 329 SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV 388
YF M + + + HY+C++D+ R G +EA+K I+ MP +P WG+LL +C+
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 389 YKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
Y ++LA+IAA LL++EP+N Y L +Y + G+ E+A ++R M + GVK GSS
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Query: 449 W 449
W
Sbjct: 424 W 424
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM------------------LQDSS-- 67
F ++ +R+ V WN+MI+ Y G KEA+EL+ +M +D S
Sbjct: 106 FDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR 165
Query: 68 ------------LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALIS 115
KP+ TL + +SAC+ + L K+IHSY R + +++ L+
Sbjct: 166 AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVE 225
Query: 116 MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDV 171
Y + G + + V + E D D +A+++L+ YA GD A + F + D
Sbjct: 226 AYGRCGSIVYVQLVFDSME--DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
Query: 172 VAWTAMIVGYVQNGLNDDALELFRAMTKE-GPRPNSFTLAAMLSVSSR 218
+A+ ++ GL D+AL F+ M + G R + + ++ V SR
Sbjct: 284 IAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSR 331
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 220/398 (55%), Gaps = 34/398 (8%)
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
Q L DA+EL +G P+ + + SL H K++H ++S+
Sbjct: 216 CQRRLYKDAIELL----DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP 271
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
+ N +I+M+ + SI +A++VF+ + + D SW M+ A + +G+G++A+ LFE+M
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFDHMV-DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTK 330
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
G++P+ T++ V AC VG +E+ +F+ M + H I P HY ++ + G+ G L
Sbjct: 331 HGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLV 390
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYS 421
EA ++I ++P EP W ++ + +++ ++DL E ++ ++P + + + + +
Sbjct: 391 EAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP----SKAVINKIPT 446
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWE 481
K + K ++ + S LE +N L KDE +M K
Sbjct: 447 PPPK---SFKETNMVTSK-------SRILEFRN----------LTFYKDEAKEMAAK--- 483
Query: 482 EIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICND 541
K + ++PDT VLHD++ E K++ L YHSE+LAIA+GII TP TL I+KNLR+C D
Sbjct: 484 --KGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGD 541
Query: 542 CHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
CH IK +SK++GR +IVRD RFHHFKDG CSC DYW
Sbjct: 542 CHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 43/238 (18%)
Query: 53 KEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNA 112
K+A+EL D PD+ +C NL+++ K++H + ++++F + N
Sbjct: 222 KDAIELL-----DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 113 LISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV 172
+ISM+ E S I+D A+++FD + ++D+
Sbjct: 277 VISMFG------------ECSSITD---------------------AKRVFDHMVDKDMD 303
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT-LAAMLSVSSRGASLNHGKQIHAS 231
+W M+ Y NG+ DDAL LF MTK G +PN T L L+ ++ G +H
Sbjct: 304 SWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEE--AFLHFD 361
Query: 232 AIRSREDLSISVGNAL--ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG 287
++++ +S + L + + K G + A++ + + W +M HG
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 226/437 (51%), Gaps = 39/437 (8%)
Query: 19 GRIDLALAQFQQMSE-RDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAS 77
G + A + + MSE RD+ +WNS+I+G G E+L F +M ++ ++ D TL
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 586
Query: 78 TLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISD 137
T+SA NL + G+ H I++ ++ +QN LI+MY +
Sbjct: 587 TISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK---------------- 630
Query: 138 LDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM 197
DI A ++F + + ++ +W +I QN + +LFR +
Sbjct: 631 -----------------DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL 673
Query: 198 TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
E PN T +LS S++ S ++G Q H IR + V AL+ MY+ G +
Sbjct: 674 KLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGML 730
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLS 316
+ KVF N +W+S+I A HG+GE+A+ELF+++ + +EP+ +++ +LS
Sbjct: 731 ETGMKVFR-NSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 789
Query: 317 ACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDV 376
AC+H G +++G SY+ M ++P H ++D+ GRAG L+EA++FI +
Sbjct: 790 ACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKA 849
Query: 377 IAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLM 436
WG+LLS+C + + L K AE L +EPDN+ Y +LAN Y G WE+A ++RK++
Sbjct: 850 GVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMV 909
Query: 437 NDRGVKKEQGSSWLEIQ 453
D +KK G S ++++
Sbjct: 910 EDNALKKLPGYSVIDVR 926
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 186/388 (47%), Gaps = 41/388 (10%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
L+ + + + +++ + +G + + F ++ E+D++ WNSMI NQ+G A+ LF
Sbjct: 119 LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M+ + + D TL SA ++L +H I T ++ NAL+++YAK
Sbjct: 179 MIHKGN-EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG- 236
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+++ A +F + +RD+V+W ++
Sbjct: 237 --------------------------------ENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS--REDL 239
+ NG +L+ F++MT G ++ T + ++S S L G+ +H I+S +
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 240 SISVGNALITMYAKAGSIDNAQKVF-NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
+SVGN++I+MY+K G + A+ VF L+C D +S ++++ A +G+ EEA + +
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVC--RDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 299 MLAL-GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRA 357
M ++ I+PD T V + S C + +GR+ + L +ID+YG+
Sbjct: 383 MQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 358 GLLQEAFKFIENMPIEPDVIAWGSLLSS 385
GL +A + + D+++W S++S+
Sbjct: 443 GLTTQA-ELLFKTTTHRDLVSWNSMISA 469
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 189/458 (41%), Gaps = 85/458 (18%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS++ G + A F+++ RD+++ N+++ G+ +G +EA + + M +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+PD T+ S S C +L G+ +H Y +R +E+ R
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVR----------------------MEMQSR 427
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+E +++D Y K G T A +F + +RD+V+W +MI + QNG
Sbjct: 428 ALE----------VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTH 477
Query: 189 DALELFRAMTKE--GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
A LF+ + E + + T+ A+L+ SL GK +H
Sbjct: 478 KAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC---------------- 521
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IE 305
K G + +A + D SW+S+I A G E++ F+ M G I
Sbjct: 522 ---WLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIR 578
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNL-------------------------MASVHKI 340
D IT +G +SA ++GLV QGR + L + S K+
Sbjct: 579 HDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKV 638
Query: 341 -----EPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
+P L + C+I + +E F+ N+ +EP+ I + LLS+ +
Sbjct: 639 FGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYG 698
Query: 396 KIAAERLLLIE-PDNSGAYSALANVYSACGKWEDAAKI 432
A L+ N +AL ++YS+CG E K+
Sbjct: 699 MQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKV 736
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 180/384 (46%), Gaps = 61/384 (15%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +++L+ + A F M RDIV+WN+++ +G +++L+ F SM S
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM-TGSGQ 285
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISG--AVQNALISMYAKTGGVEVA 126
+ D T + +SAC+++E + LG+ +H +I++ + +V N++ISMY+K G
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG----- 340
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
D A +F+ L RDV++ A++ G+ NG+
Sbjct: 341 ----------------------------DTEAAETVFEELVCRDVISSNAILNGFAANGM 372
Query: 187 NDDALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR-SREDLSISVG 244
++A + M + + +P+ T+ ++ S+ + G+ +H +R + ++ V
Sbjct: 373 FEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVI 432
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA--L 302
N++I MY K G A+ +F + D VSW+SMI A +Q+G +A LF+++++
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTT-HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYS 491
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
+ T + +L++C + G+ SVH C + + G L
Sbjct: 492 CSKFSLSTVLAILTSCDSSDSLIFGK-------SVH----------CWLQ---KLGDLTS 531
Query: 363 AFKFIENMPIEPDVIAWGSLLSSC 386
AF +E M D+ +W S++S C
Sbjct: 532 AFLRLETMSETRDLTSWNSVISGC 555
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 158/340 (46%), Gaps = 11/340 (3%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
D + LL Y + G++ + +FD L+ +DV+ W +MI QNG A+ LF M
Sbjct: 121 DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMI 180
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
+G +S TL S S +H AI + S+ NAL+ +YAK ++
Sbjct: 181 HKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLS 240
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSAC 318
+A+ VF + + D VSW++++ +G ++++ F+ M G E D +T+ V+SAC
Sbjct: 241 SAECVFTHM-EHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 319 THVGLVEQGRSYFNL-MASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVI 377
+ + + G S L + S + E +S +I +Y + G + A E + + DVI
Sbjct: 300 SSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRDVI 358
Query: 378 AWGSLLSSCKVYKNVDLAKIAAERLL---LIEPDNSGAYSALANVYSACGKWEDAAKIRK 434
+ ++L+ + A ++ I+PD + + ++ S CG + + R
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD----IATVVSITSICGDLSFSREGRA 414
Query: 435 LMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYK 474
+ + V+ E S LE+ N V + L Q + ++K
Sbjct: 415 V-HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFK 453
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 246/511 (48%), Gaps = 84/511 (16%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++S++ G +++A F + +RD+V+W++MIA Y Q G EA+ LF M++ +KP
Sbjct: 341 LMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR-IHIKP 399
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIR----TEFDISGAVQ---------------- 110
+ TL S L C + LGK IH Y I+ +E + + AV
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 111 -----------NALISMYAKTGGVEVARRVVE-----------QSEISDLDAIAFT---- 144
NAL Y + G A V + ++ + L AF
Sbjct: 460 ERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYA 519
Query: 145 ----------------------ALLDGYAKLGDITPARQIFDSLR-NRDVVAWTAMIVGY 181
AL++ + K + A +FD + V+W M+ GY
Sbjct: 520 RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGY 579
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
+ +G ++A+ FR M E +PN+ T ++ ++ ++L G +H+S I+
Sbjct: 580 LLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQT 639
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
VGN+L+ MYAK G I++++K F I N VSW++M+ A A HGL A+ LF M
Sbjct: 640 PVGNSLVDMYAKCGMIESSEKCFIEIS-NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQE 698
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
++PD ++++ VLSAC H GLVE+G+ F M HKIE + HYACM+DL G+AGL
Sbjct: 699 NELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFG 758
Query: 362 EAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYS 421
EA + + M ++ V WG+LL+S +++ N+ L+ A +L+ +EP N YS
Sbjct: 759 EAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYS------- 811
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSSWLEI 452
++ ++ N +KK SW+E+
Sbjct: 812 ------QDRRLGEVNNVSRIKKVPACSWIEV 836
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 214/520 (41%), Gaps = 96/520 (18%)
Query: 20 RIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTL 79
R DL+ F + + +V WNSMI GY + G +EAL F M ++ + PDK++ L
Sbjct: 48 RQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFAL 107
Query: 80 SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD 139
AC + G +IH I + + AL+ MY K AR +V
Sbjct: 108 KACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCK------ARDLVS-------- 153
Query: 140 AIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTK 199
ARQ+FD + +DVV W M+ G QNG + AL LF M
Sbjct: 154 -------------------ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRS 194
Query: 200 EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDN 259
+ +L ++ S+ + + +H I+ + S G LI MY +
Sbjct: 195 CCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYA 252
Query: 260 AQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI---------T 310
A+ VF + W D SW +M+ A A +G EE +ELF+ M + + +
Sbjct: 253 AESVFEEV-WRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAA 311
Query: 311 YVG--VLSACTHVGLVEQG--------RSYFNLMASVHKIEPT-----------LSHYAC 349
YVG V H V+QG S ++ + ++E + ++
Sbjct: 312 YVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSA 371
Query: 350 MIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSC------KVYKNVDLAKIAAE 400
MI Y +AG EA +M I+P+ + S+L C ++ K++ I A+
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 401 RLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFG 460
IE + A +A+ ++Y+ CG++ A K L I++ V F
Sbjct: 432 ----IESELETA-TAVISMYAKCGRFSPALK--------------AFERLPIKDAV-AFN 471
Query: 461 AEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLE 500
A + Q + K D +++ +K G PD+ +++ L+
Sbjct: 472 ALAQGYTQIGDANKAFD-VYKNMKLHGVCPDSRTMVGMLQ 510
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 152/332 (45%), Gaps = 40/332 (12%)
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE-GPRP 204
L++ Y+ +R IFDS+R+ VV W +MI GY + GL+ +AL F M++E G P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 205 NSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF 264
+ ++ L + G +IH + + +G AL+ MY KA + +A++VF
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 265 NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA------- 317
+ + D V+W++M+ LAQ+G A+ LF M + ++ DH++ ++ A
Sbjct: 159 DKM-HVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKS 217
Query: 318 ----CTHVGLVEQGRSY---------FNLMASVHKIEPTL--------SHYACMIDLYGR 356
C H ++++G + + A ++ E S + M+ Y
Sbjct: 218 DVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAH 277
Query: 357 AGLLQEA---FKFIENMPIEPDVIAWGSLLSSCK----VYKNVDLAKIAAERLLLIEPDN 409
G +E F + N + + +A S L + + K + + A ++ L+ +
Sbjct: 278 NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI---GD 334
Query: 410 SGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
++L ++YS CG+ E A ++ + DR V
Sbjct: 335 VSVATSLMSMYSKCGELEIAEQLFINIEDRDV 366
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ ++ G I+ + F ++S + IV+WN+M++ Y HG A+ LF SM Q++ L
Sbjct: 643 NSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM-QENEL 701
Query: 69 KPDKFTLASTLSACTNLENMNLGKQI 94
KPD + S LSAC + + GK+I
Sbjct: 702 KPDSVSFLSVLSACRHAGLVEEGKRI 727
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 221/420 (52%), Gaps = 41/420 (9%)
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGG 122
++ + P T + AC ++GKQIH ++++ +S + VQ ++ +Y +
Sbjct: 5 EEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVED-- 62
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
LLD AR++FD + DVV W ++ GYV
Sbjct: 63 ---------------------KLLLD----------ARKVFDEIPQPDVVKWDVLMNGYV 91
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR-SREDLSI 241
+ GL + LE+FR M +G P+ F++ L+ ++ +L GK IH + S + +
Sbjct: 92 RCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDV 151
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM-L 300
VG AL+ MYAK G I+ A +VF + N SW+++I A +G ++A+ E++
Sbjct: 152 FVGTALVDMYAKCGCIETAVEVFKKLTRRN-VFSWAALIGGYAAYGYAKKAMTCLERLER 210
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
GI+PD + +GVL+AC H G +E+GRS M + ++I P HY+C++DL RAG L
Sbjct: 211 EDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRL 270
Query: 361 QEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDN----SGAYSAL 416
+A IE MP++P WG+LL+ C+ +KNV+L ++A + LL +E N A L
Sbjct: 271 DDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 330
Query: 417 ANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMM 476
+N+Y + + +A+K+R ++ RGV+K G S LE+ V F + D HP +I+ ++
Sbjct: 331 SNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 390
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 42/274 (15%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F ++ + D+V W+ ++ GY + G E LE+F ML L+PD+F++ + L+AC +
Sbjct: 72 FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLV-KGLEPDEFSVTTALTACAQVGA 130
Query: 88 MNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTAL 146
+ GK IH ++ + + S V AL+ MYAK G +E A V
Sbjct: 131 LAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV----------------- 173
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE-GPRPN 205
F L R+V +W A+I GY G A+ + +E G +P+
Sbjct: 174 ----------------FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPD 217
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--ALITMYAKAGSIDNAQKV 263
S L +L+ + G L G+ + + + +R +++ + ++ + +AG +D+A +
Sbjct: 218 SVVLLGVLAACAHGGFLEEGRSMLEN-MEARYEITPKHEHYSCIVDLMCRAGRLDDALNL 276
Query: 264 FNLICWNNDTVSWSSMIIALAQHG---LGEEAIE 294
+ W +++ H LGE A++
Sbjct: 277 IEKMPMKPLASVWGALLNGCRTHKNVELGELAVK 310
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G I+ A+ F++++ R++ +W ++I GY +G+ K+A+ + ++ +KP
Sbjct: 157 LVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKP 216
Query: 71 DKFTLASTLSACTNLENMNLGKQ-IHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
D L L+AC + + G+ + + R E + ++ + + G ++ A +
Sbjct: 217 DSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNL 276
Query: 130 VEQSEISDLDAIAFTALLDG 149
+E+ + L ++ + ALL+G
Sbjct: 277 IEKMPMKPLASV-WGALLNG 295
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 244/512 (47%), Gaps = 83/512 (16%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS + + A F++M ++ V+WN+MI Y+Q G +EA+ +F +M + ++
Sbjct: 80 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK-NV 138
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ T+ + LSA + E +H +++ +V +L+ Y++ G + A R
Sbjct: 139 EISPVTIINLLSAHVSHE------PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAER 192
Query: 129 V---VEQSEISDL------------------------------DAIAFTALLDG------ 149
+ +Q I L DA+A +L G
Sbjct: 193 LYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 252
Query: 150 -----------------------------YAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
Y+K D+ +F+ L+ +++W ++I G
Sbjct: 253 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 312
Query: 181 YVQNGLNDDALELF-RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
VQ+G A E+F + M G P++ T+A++L+ S+ LN GK++H +R+ +
Sbjct: 313 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN 372
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLI---CWNNDTVSWSSMIIALAQHGLGEEAIELF 296
V ALI MYAK G+ A+ VF I C T +W+SMI + GL A+ +
Sbjct: 373 ENFVCTALIDMYAKCGNEVQAESVFKSIKAPC----TATWNSMISGYSLSGLQHRALSCY 428
Query: 297 EKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGR 356
+M G++PD IT++GVLSAC H G V++G+ F M I PTL HYA M+ L GR
Sbjct: 429 LEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR 488
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSAL 416
A L EA I M I+PD WG+LLS+C +++ +++ + A ++ +++ N G Y +
Sbjct: 489 ACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLM 548
Query: 417 ANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
+N+Y+ W+D ++R +M D G G S
Sbjct: 549 SNLYATEAMWDDVVRVRNMMKDNGYDGYLGVS 580
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 164/356 (46%), Gaps = 43/356 (12%)
Query: 31 MSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNL 90
M ERD V WN++I GY+++G++ +A +LF MLQ P TL + L C ++
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ-GFSPSATTLVNLLPFCGQCGFVSQ 59
Query: 91 GKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGY 150
G+ +H ++ ++ V+NALIS Y+K
Sbjct: 60 GRSVHGVAAKSGLELDSQVKNALISFYSKC------------------------------ 89
Query: 151 AKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
A+LG A +F ++++ V+W MI Y Q+GL ++A+ +F+ M ++ + T+
Sbjct: 90 AELGS---AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII 146
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWN 270
+LS A ++H + +H ++ ISV +L+ Y++ G + +A++++
Sbjct: 147 NLLS-----AHVSH-EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASA-KQ 199
Query: 271 NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSY 330
+ V +S++ A+ G + A+ F K L ++ D + VG+L C ++ G S
Sbjct: 200 DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 259
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
TL +I +Y + ++ E + P +I+W S++S C
Sbjct: 260 HGYAIKSGLCTKTLVVNG-LITMYSKFDDVETVLFLFEQLQETP-LISWNSVISGC 313
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 230/439 (52%), Gaps = 46/439 (10%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
++ SWN ++ ++ SG +D A F ++ E+D V+WN +I+ Y + G A LFS+M
Sbjct: 437 KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 496
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
S P + + + N M L RT FD +M K G
Sbjct: 497 PLKS---PASWNI--LIGGYVNCREMKLA--------RTYFD----------AMPQKNG- 532
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+++ ++ GY KLGD+ A ++F + +D + + AMI Y
Sbjct: 533 ------------------VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYT 574
Query: 183 QNGLNDDALELFRAMTKEGP--RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
QNG DAL+LF M + +P+ TL++++S +S+ + + G + + +
Sbjct: 575 QNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKID 634
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
+ +LI +Y K G A K+F+ + DTVS+S+MI+ +G+ EA LF M+
Sbjct: 635 DLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMI 693
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
I P+ +T+ G+LSA +H GLV++G FN M H +EP+ HY M+D+ GRAG L
Sbjct: 694 EKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRL 752
Query: 361 QEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVY 420
+EA++ I++MP++P+ WG+LL + ++ NV+ +IA + +E D +G S LA +Y
Sbjct: 753 EEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIY 812
Query: 421 SACGKWEDAAKIRKLMNDR 439
S+ G+W+DA +R + ++
Sbjct: 813 SSVGRWDDARTVRDSIKEK 831
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 207/413 (50%), Gaps = 29/413 (7%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D +W ++ +QH KE ++++ M +S + P + S L AC +ENM GK I
Sbjct: 337 DSFSWGCLVRFLSQHRKFKETVDVYIDM-HNSGIPPSSHAVTSVLRACGKMENMVDGKPI 395
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
H+ ++ VQ L+ +Y++ G +E+A++ + +I++ + +++ +LL GY + G
Sbjct: 396 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFD--DIAEKNTVSWNSLLHGYLESG 453
Query: 155 DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
++ AR++FD + +D V+W +I Y + G +A LF AM + P S+ +
Sbjct: 454 ELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKS--PASWNILIGGY 511
Query: 215 VSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTV 274
V+ R L + + A+ + +S +I+ Y K G + +A+++F L+ D +
Sbjct: 512 VNCREMKL---ARTYFDAMPQKNGVSWIT---MISGYTKLGDVQSAEELFRLMS-KKDKL 564
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALG--IEPDHITYVGVLSACTHVGLVEQGRSYFN 332
+ +MI Q+G ++A++LF +ML I+PD IT V+SA + +G G ++
Sbjct: 565 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVE 623
Query: 333 LMASVH--KIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
+ H KI+ LS +IDLY + G +AFK N+ + D +++ +++ C
Sbjct: 624 SYITEHGIKIDDLLS--TSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGC---- 676
Query: 391 NVDLAKIAAERLL--LIE---PDNSGAYSALANVYSACGKWEDAAKIRKLMND 438
++ A L +IE P N ++ L + YS G ++ K M D
Sbjct: 677 GINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD 729
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 65/317 (20%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAG---------------- 45
L+S SWNI+I ++N + LA F M +++ V+W +MI+G
Sbjct: 498 LKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRL 557
Query: 46 ---------------YNQHGFDKEALELFSSMLQ-DSSLKPDKFTLASTLSACTNLENMN 89
Y Q+G K+AL+LF+ ML+ +S ++PD+ TL+S +SA + L N +
Sbjct: 558 MSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS 617
Query: 90 LGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDG 149
G + SYI TE I +D + T+L+D
Sbjct: 618 FGTWVESYI--TEHGI-------------------------------KIDDLLSTSLIDL 644
Query: 150 YAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTL 209
Y K GD A ++F +L +D V+++AMI+G NG+ +A LF AM ++ PN T
Sbjct: 645 YMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 704
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
+LS S + G + S + S ++ M +AG ++ A ++ +
Sbjct: 705 TGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPM 764
Query: 270 NNDTVSWSSMIIALAQH 286
+ W ++++A H
Sbjct: 765 QPNAGVWGALLLASGLH 781
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 134/284 (47%), Gaps = 14/284 (4%)
Query: 156 ITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSV 215
+T ++I D +W ++ Q+ + ++++ M G P+S + ++L
Sbjct: 323 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 382
Query: 216 SSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVS 275
+ ++ GK IHA A+++ + V L+ +Y++ G I+ A+K F+ I N TVS
Sbjct: 383 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKN-TVS 441
Query: 276 WSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA 335
W+S++ + G +EA +F+K+ E D +++ ++S+ G + S F+ M
Sbjct: 442 WNSLLHGYLESGELDEARRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMP 497
Query: 336 SVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA 395
+ + + +I Y ++ A + + MP + + ++W +++S Y +
Sbjct: 498 L-----KSPASWNILIGGYVNCREMKLARTYFDAMP-QKNGVSWITMISG---YTKLGDV 548
Query: 396 KIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDR 439
+ A E L+ + Y A+ Y+ GK +DA K+ M +R
Sbjct: 549 QSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 592
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 202/366 (55%), Gaps = 4/366 (1%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+IS+ + G A F Q+ TWN MI + + +EAL LF M+ +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
DKFT + AC ++ LG Q+H I+ F QN L+ +Y K G + R+V
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
++ + +++T +L G + A +F+ + R+VV+WTAMI YV+N D+A
Sbjct: 178 DK--MPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEA 235
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
+LFR M + +PN FT+ +L S++ SL+ G+ +H A ++ L +G ALI M
Sbjct: 236 FQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDM 295
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHI 309
Y+K GS+ +A+KVF+++ +W+SMI +L HG GEEA+ LFE+M +EPD I
Sbjct: 296 YSKCGSLQDARKVFDVM-QGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAI 354
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
T+VGVLSAC + G V+ G YF M V+ I P H ACMI L +A +++A +E+
Sbjct: 355 TFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVES 414
Query: 370 MPIEPD 375
M +PD
Sbjct: 415 MDSDPD 420
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
RSI SW M+ +++ ++D A F QM R++V+W +MI Y ++ EA +LF M
Sbjct: 183 RSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRM 242
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
Q +KP++FT+ + L A T L ++++G+ +H Y + F + + ALI MY+K G
Sbjct: 243 -QVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGS 301
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
++ AR+V FD ++ + + W +MI
Sbjct: 302 LQDARKV---------------------------------FDVMQGKSLATWNSMITSLG 328
Query: 183 QNGLNDDALELFRAMTKEGP-RPNSFTLAAMLSVSSRGASLNHG 225
+G ++AL LF M +E P++ T +LS + ++ G
Sbjct: 329 VHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 240/488 (49%), Gaps = 76/488 (15%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM------ 62
N +IS++ G++D+A F +MSERD V+WN++I Y EA +L M
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 63 ----------------------------LQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
+++ +++ + + L AC+++ + GK
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 95 HSYIIRT---EFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYA 151
H +IR+ DI V+N+LI+MY++
Sbjct: 343 HCLVIRSCSFSHDIDN-VRNSLITMYSRCS------------------------------ 371
Query: 152 KLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAA 211
D+ A +F + + W ++I G+ N +++ L + M G PN TLA+
Sbjct: 372 ---DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLAS 428
Query: 212 MLSVSSRGASLNHGKQIHASAIR--SREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
+L + +R +L HGK+ H +R S +D I + N+L+ MYAK+G I A++VF+ +
Sbjct: 429 ILPLFARVGNLQHGKEFHCYILRRQSYKDCLI-LWNSLVDMYAKSGEIIAAKRVFDSM-R 486
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
D V+++S+I + G GE A+ F+ M GI+PDH+T V VLSAC+H LV +G
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHW 546
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
F M V I L HY+CM+DLY RAG L +A +P EP +LL +C ++
Sbjct: 547 LFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 390 KNVDLAKIAAERLLL-IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
N ++ + AA++LLL +P++ G Y LA++Y+ G W ++ L++D GV+K +
Sbjct: 607 GNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFA 666
Query: 449 WLEIQNEV 456
+E +E+
Sbjct: 667 LMETDSEL 674
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 172/354 (48%), Gaps = 13/354 (3%)
Query: 37 VTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHS 96
+ WN +I Y ++ +E++ ++ M+ ++ D+FT S + AC L + G+ +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 97 YIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDI 156
I + + V NALISMY + G V+VARR+ ++ +S+ DA+++ A+++ Y +
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKL 266
Query: 157 TPARQIFDSLR----NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAM 212
A ++ D + +V W + G ++ G AL M R S +
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 213 LSVSSRGASLNHGKQIHASAIRS---REDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
L S +L GK H IRS D+ +V N+LITMY++ + +A VF +
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQV-E 384
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
N +W+S+I A + EE L ++ML G P+HIT +L VG ++ G+
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ + + L + ++D+Y ++G + A + ++M + D + + SL+
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLI 497
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 160/377 (42%), Gaps = 80/377 (21%)
Query: 49 HGFDKEALELFSSM-LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISG 107
HG EA FS + Q S + ++ AS LS C G+Q+H++ I + +
Sbjct: 59 HGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 108 AVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR 167
+ L++ Y+ ++ A+ + E SEI + P
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEI--------------------LHP--------- 149
Query: 168 NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQ 227
+ W +I Y++N +++ +++ M +G R + FT +++ + +G+
Sbjct: 150 ----LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 228 IHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG 287
+H S S ++ V NALI+MY + G +D A+++F+ + D VSW+++I
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAIINCYTSEE 264
Query: 288 LGEEAIELFEKMLALGIEPDHIT-------------YVGVLS------------------ 316
EA +L ++M G+E +T Y+G L+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 317 ----ACTHVGLVEQGRSYFNLM----ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
AC+H+G ++ G+ + L+ + H I+ + +I +Y R L+ AF +
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS---LITMYSRCSDLRHAFIVFQ 381
Query: 369 NMPIEPDVIA-WGSLLS 384
+E + ++ W S++S
Sbjct: 382 Q--VEANSLSTWNSIIS 396
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
WN ++ ++ SG I A F M +RD VT+ S+I GY + G + AL F M S
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM-DRSG 520
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTE--FDISGAVQN--ALISMYAKTGGV 123
+KPD T+ + LSAC+ + NL ++ H + E F I +++ ++ +Y + G +
Sbjct: 521 IKPDHVTMVAVLSACS---HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYL 577
Query: 124 EVARRVVEQSEISDLDAIAFT----ALLDGYAKLGD 155
+ AR + A+ T L+ G +G+
Sbjct: 578 DKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGE 613
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 240/488 (49%), Gaps = 76/488 (15%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM------ 62
N +IS++ G++D+A F +MSERD V+WN++I Y EA +L M
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 63 ----------------------------LQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
+++ +++ + + L AC+++ + GK
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 95 HSYIIRT---EFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYA 151
H +IR+ DI V+N+LI+MY++
Sbjct: 343 HCLVIRSCSFSHDIDN-VRNSLITMYSRCS------------------------------ 371
Query: 152 KLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAA 211
D+ A +F + + W ++I G+ N +++ L + M G PN TLA+
Sbjct: 372 ---DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLAS 428
Query: 212 MLSVSSRGASLNHGKQIHASAIR--SREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
+L + +R +L HGK+ H +R S +D I + N+L+ MYAK+G I A++VF+ +
Sbjct: 429 ILPLFARVGNLQHGKEFHCYILRRQSYKDCLI-LWNSLVDMYAKSGEIIAAKRVFDSM-R 486
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
D V+++S+I + G GE A+ F+ M GI+PDH+T V VLSAC+H LV +G
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHW 546
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
F M V I L HY+CM+DLY RAG L +A +P EP +LL +C ++
Sbjct: 547 LFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 390 KNVDLAKIAAERLLL-IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
N ++ + AA++LLL +P++ G Y LA++Y+ G W ++ L++D GV+K +
Sbjct: 607 GNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFA 666
Query: 449 WLEIQNEV 456
+E +E+
Sbjct: 667 LMETDSEL 674
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 172/354 (48%), Gaps = 13/354 (3%)
Query: 37 VTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHS 96
+ WN +I Y ++ +E++ ++ M+ ++ D+FT S + AC L + G+ +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 97 YIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDI 156
I + + V NALISMY + G V+VARR+ ++ +S+ DA+++ A+++ Y +
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKL 266
Query: 157 TPARQIFDSLR----NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAM 212
A ++ D + +V W + G ++ G AL M R S +
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 213 LSVSSRGASLNHGKQIHASAIRS---REDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
L S +L GK H IRS D+ +V N+LITMY++ + +A VF +
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQV-E 384
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
N +W+S+I A + EE L ++ML G P+HIT +L VG ++ G+
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ + + L + ++D+Y ++G + A + ++M + D + + SL+
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLI 497
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 160/377 (42%), Gaps = 80/377 (21%)
Query: 49 HGFDKEALELFSSM-LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISG 107
HG EA FS + Q S + ++ AS LS C G+Q+H++ I + +
Sbjct: 59 HGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 108 AVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR 167
+ L++ Y+ ++ A+ + E SEI + P
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEI--------------------LHP--------- 149
Query: 168 NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQ 227
+ W +I Y++N +++ +++ M +G R + FT +++ + +G+
Sbjct: 150 ----LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 228 IHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG 287
+H S S ++ V NALI+MY + G +D A+++F+ + D VSW+++I
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAIINCYTSEE 264
Query: 288 LGEEAIELFEKMLALGIEPDHIT-------------YVGVLS------------------ 316
EA +L ++M G+E +T Y+G L+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 317 ----ACTHVGLVEQGRSYFNLM----ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIE 368
AC+H+G ++ G+ + L+ + H I+ + +I +Y R L+ AF +
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS---LITMYSRCSDLRHAFIVFQ 381
Query: 369 NMPIEPDVIA-WGSLLS 384
+E + ++ W S++S
Sbjct: 382 Q--VEANSLSTWNSIIS 396
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
WN ++ ++ SG I A F M +RD VT+ S+I GY + G + AL F M S
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM-DRSG 520
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTE--FDISGAVQN--ALISMYAKTGGV 123
+KPD T+ + LSAC+ + NL ++ H + E F I +++ ++ +Y + G +
Sbjct: 521 IKPDHVTMVAVLSACS---HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYL 577
Query: 124 EVARRVVEQSEISDLDAIAFT----ALLDGYAKLGD 155
+ AR + A+ T L+ G +G+
Sbjct: 578 DKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGE 613
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 217/420 (51%), Gaps = 41/420 (9%)
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDIS-GAVQNALISMYAKTGG 122
++ + P T + AC ++GKQIH ++++ +S G VQ ++ +Y +
Sbjct: 108 EEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVE--- 164
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
D + F A R++FD + DVV W ++ GYV
Sbjct: 165 ----------------DKLLFDA--------------RKVFDEIPQPDVVKWDVLMNGYV 194
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLSI 241
+ GL + LE+F+ M G P+ F++ L+ ++ +L GK IH + R + +
Sbjct: 195 RCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDV 254
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM-L 300
VG AL+ MYAK G I+ A +VF + N SW+++I A +G ++A +++
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFEKLTRRN-VFSWAALIGGYAAYGYAKKATTCLDRIER 313
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
GI+PD + +GVL+AC H G +E+GR+ M + + I P HY+C++DL RAG L
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRL 373
Query: 361 QEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDN----SGAYSAL 416
+A IE MP++P WG+LL+ C+ +KNV+L ++A + LL +E N A L
Sbjct: 374 DDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
Query: 417 ANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMM 476
+N+Y + + +A K+R ++ RG++K G S LE+ V F + D HP +I+ ++
Sbjct: 434 SNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 52/279 (18%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F ++ + D+V W+ ++ GY + G E LE+F ML ++PD+F++ + L+AC +
Sbjct: 175 FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLV-RGIEPDEFSVTTALTACAQVGA 233
Query: 88 MNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTAL 146
+ GK IH ++ + + S V AL+ MYAK G +E A V E+ ++ + ++ AL
Sbjct: 234 LAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEK--LTRRNVFSWAAL 291
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNS 206
+ GYA G A D + D G +P+S
Sbjct: 292 IGGYAAYGYAKKATTCLDRIERED------------------------------GIKPDS 321
Query: 207 FTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVG--------NALITMYAKAGSID 258
L +L+ + G L G+ + E++ G + ++ + +AG +D
Sbjct: 322 VVLLGVLAACAHGGFLEEGRTM-------LENMEARYGITPKHEHYSCIVDLMCRAGRLD 374
Query: 259 NAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEAIE 294
+A + + W +++ H LGE A++
Sbjct: 375 DALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQ 413
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G I+ A+ F++++ R++ +W ++I GY +G+ K+A + ++ +KP
Sbjct: 260 LVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKP 319
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGGVEVARR 128
D L L+AC + + G+ + + + I+ ++ ++ + + G ++ A
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRTMLEN-MEARYGITPKHEHYSCIVDLMCRAGRLDDALD 378
Query: 129 VVEQSEISDLDAIAFTALLDG 149
++E+ + L ++ + ALL+G
Sbjct: 379 LIEKMPMKPLASV-WGALLNG 398
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 242/469 (51%), Gaps = 45/469 (9%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +I ++ +D A F + + R+IV+WNS++AG+ + EALE+F M+Q++ +
Sbjct: 266 NSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA-V 324
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ D+ T+ S L C E K IH IIR R
Sbjct: 325 EVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR---------------------------R 357
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
E +E+ A ++L+D Y + A + DS+ +DVV+ + MI G G +D
Sbjct: 358 GYESNEV------ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSD 411
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS-ISVGNAL 247
+A+ +F M PN+ T+ ++L+ S A L K H AIR ++ ISVG ++
Sbjct: 412 EAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSI 468
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPD 307
+ YAK G+I+ A++ F+ I N +SW+ +I A A +GL ++A+ LF++M G P+
Sbjct: 469 VDAYAKCGAIEMARRTFDQITEKN-IISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASV-HKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
+TY+ LSAC H GLV++G F M HK P+L HY+C++D+ RAG + A +
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTAVEL 585
Query: 367 IENMP--IEPDVIAWGSLLSSCK-VYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSAC 423
I+N+P ++ AWG++LS C+ +K + + +L +EP S Y ++ ++A
Sbjct: 586 IKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAE 645
Query: 424 GKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEI 472
WED A +R+L+ +R V+ G S + N F A D L E+
Sbjct: 646 KSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSEL 694
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 237/527 (44%), Gaps = 92/527 (17%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N + +M G + L +F M+ RD V+WN ++ G +GF++E L FS L+
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK-LRVWGF 123
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+P+ TL + AC +L G++IH Y+IR+ F +VQN+++ MYA +
Sbjct: 124 EPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADS-------- 173
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
D AR++FD + RDV++W+ +I YVQ+
Sbjct: 174 --------------------------DSLSARKLFDEMSERDVISWSVVIRSYVQSKEPV 207
Query: 189 DALELFRAMTKEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS-ISVGNA 246
L+LF+ M E P+ T+ ++L + ++ G+ +H +IR DL+ + V N+
Sbjct: 208 VGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNS 267
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
LI MY+K +D+A +VF+ N VSW+S++ + +EA+E+F M+ +E
Sbjct: 268 LIDMYSKGFDVDSAFRVFDETTCRN-IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEV 326
Query: 307 DHITYVGVLSACT-----------HVGLVEQG--------------RSYFNLMASVHKIE 341
D +T V +L C H ++ +G + +L+ +
Sbjct: 327 DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL 386
Query: 342 PTLSH---YAC--MIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAK 396
++++ +C MI AG EA +M P+ I SLL++C V ++ +K
Sbjct: 387 DSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSK 446
Query: 397 ----IAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEI 452
IA R L I + G +++ + Y+ CG E A + + ++ + SW I
Sbjct: 447 WAHGIAIRRSLAINDISVG--TSIVDAYAKCGAIEMARRTFDQITEKNII-----SWTVI 499
Query: 453 QNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDL 499
+ I G D +++E+K+ G+ P+ + L L
Sbjct: 500 ISAYAINGLPDKALA-----------LFDEMKQKGYTPNAVTYLAAL 535
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 237/444 (53%), Gaps = 9/444 (2%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++S++ G LA F+++ + +VT+N+ I+G ++G +F+ M + SS +P
Sbjct: 170 LVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEP 229
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ T + ++AC +L N+ G+Q+H +++ EF V ALI MY+K + A V
Sbjct: 230 NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVF 289
Query: 131 EQSEISDL-DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNG 185
+E+ D + I++ +++ G G A ++F+ L + D W ++I G+ Q G
Sbjct: 290 --TELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 186 LNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN 245
+A + F M P+ L ++LS S +L +GK+IH I++ + I V
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 246 ALITMYAKAGSIDNAQKVFNLI-CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+LI MY K G A+++F+ D V W+ MI +HG E AIE+FE + +
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKV 467
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
EP T+ VLSAC+H G VE+G F LM + +P+ H CMIDL GR+G L+EA
Sbjct: 468 EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAK 527
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
+ I+ M + SLL SC+ + + L + AA +L +EP+N + L+++Y+A
Sbjct: 528 EVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALE 586
Query: 425 KWEDAAKIRKLMNDRGVKKEQGSS 448
+WED IR++++ + + K G S
Sbjct: 587 RWEDVESIRQVIDQKQLVKLPGLS 610
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 193/473 (40%), Gaps = 106/473 (22%)
Query: 70 PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
P+KFT L +C L ++ G+ +H+ +++T F + AL+SMY K V A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 130 VEQSE---ISDLDAIAFTALLDGYAK---------------------------LGDITPA 159
+++ I+ ++A L +G+ + GDI
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 160 RQI-----------------------------------FDSLRNRDVVAWTAMIVGYVQN 184
Q+ F+ + ++ VV + A I G ++N
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 185 GLNDDALELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
G+ + +F M K PN T ++ + +L +G+Q+H ++ V
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
G ALI MY+K +A VF + + +SW+S+I + +G E A+ELFEK+ + G
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHY-----AC--------- 349
++PD T+ ++S + +G V + +F M SV + P+L AC
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV-PSLKCLTSLLSACSDIWTLKNG 387
Query: 350 ---------------------MIDLYGRAGLLQEAFKFIENMPIEP-DVIAWGSLLSSCK 387
+ID+Y + GL A + + +P D + W ++S
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 388 VYKNVDLAKIAAERLL--LIEPDNSGAYSALANVYSACGKWEDAAKIRKLMND 438
+ + A E L +EP + ++A+ + S CG E ++I +LM +
Sbjct: 448 KHGECESAIEIFELLREEKVEP-SLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 243/484 (50%), Gaps = 38/484 (7%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++ WN ++ ++ G D AL+ F M +RD+V+WN +I + G + AL+ F ++
Sbjct: 168 NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFW-LM 226
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
++ ++PD++T++ +S C++L ++ GKQ + I+ F + V A I M++K
Sbjct: 227 REMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNR- 285
Query: 124 EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ 183
LD KL F L D V +MI Y
Sbjct: 286 -----------------------LDDSVKL---------FRELEKWDSVLCNSMIGSYSW 313
Query: 184 NGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
+ +DAL LF + RP+ FT +++LS S L+HG +H+ I+ DL +V
Sbjct: 314 HCCGEDALRLFILAMTQSVRPDKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDTAV 372
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA-L 302
+L+ MY K GS+D A VF D + W+++I+ LA++ E++ +F ++L
Sbjct: 373 ATSLMEMYFKTGSVDLAMGVFAKTD-GKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ 431
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
++PD +T +G+L AC + G V +G F+ M H + P HYAC+I+L R G++ E
Sbjct: 432 SLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINE 491
Query: 363 AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSA 422
A + +P EP W +L + + LA+ A+ +L EP +S Y L +Y
Sbjct: 492 AKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEM 551
Query: 423 CGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAED-SLHPQKDEIYKMMDKIWE 481
+WE++ K+R MN+ +K QGSS + I++ V F A+ +H + + Y+ ++
Sbjct: 552 TWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGRYKWYQSQTQMCV 611
Query: 482 EIKK 485
+KK
Sbjct: 612 GVKK 615
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 160/322 (49%), Gaps = 39/322 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
++ +WN+ + +G ++ AL F +M ERD+V+WN+MI+G GF + + +F M
Sbjct: 68 KNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDM 127
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
Q ++P +FT + S T + + G+QIH NA+ S
Sbjct: 128 -QRWEIRPTEFTFSILASLVTCVRH---GEQIHG--------------NAICS------- 162
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+S + + + +++D Y +LG A +F ++ +RDVV+W +I+
Sbjct: 163 -----------GVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G + AL+ F M + +P+ +T++ ++S+ S L+ GKQ A I+ +
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 243 VGNALITMYAKAGSIDNAQKVF-NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
V A I M++K +D++ K+F L W D+V +SMI + + H GE+A+ LF +
Sbjct: 272 VLGAGIDMFSKCNRLDDSVKLFRELEKW--DSVLCNSMIGSYSWHCCGEDALRLFILAMT 329
Query: 302 LGIEPDHITYVGVLSACTHVGL 323
+ PD T+ VLS+ V L
Sbjct: 330 QSVRPDKFTFSSVLSSMNAVML 351
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 52/245 (21%)
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
P+S + +++ S S K +HA + + + GN + +Y K+GS+ NA ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 264 F------NLICWN------------------------NDTVSWSSMIIALAQHGLGEEAI 293
F N I WN D VSW++MI L G E I
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 294 ELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ--------GRSYFNLMASVHKIEPTLS 345
+F M I P T+ + S T V EQ G S +NL+
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVV---------- 171
Query: 346 HYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKN--VDLAKIAAERLL 403
+ ++D+Y R G+ A M + DV++W L+ SC N V L + R +
Sbjct: 172 -WNSVMDMYRRLGVFDYALSVFLTME-DRDVVSWNCLILSCSDSGNKEVALDQFWLMREM 229
Query: 404 LIEPD 408
I+PD
Sbjct: 230 EIQPD 234
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 214/352 (60%), Gaps = 17/352 (4%)
Query: 144 TALLDGYAKLGDITPARQIFD-SLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP 202
T+L+ Y+ +GD+ ARQ+FD + +++V WTAMI Y +N + +A+ELF+ M E
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 203 RPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS--ISVGNALITMYAKAGSIDNA 260
+ + LS + ++ G++I++ +I+ + L+ +++ N+L+ MY K+G + A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG------IEPDHITYVGV 314
+K+F+ D +++SMI A +G +E++ELF+KM + I P+ +T++GV
Sbjct: 224 RKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
L AC+H GLVE+G+ +F M + ++P +H+ CM+DL+ R+G L++A +FI MPI+P
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP 342
Query: 375 DVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRK 434
+ + W +LL +C ++ NV+L + R+ ++ D+ G Y AL+N+Y++ G W++ +K+R
Sbjct: 343 NTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRD 402
Query: 435 LMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKL 486
+ R + G SW+E+ + ++ F + P ++ MM +I E ++ L
Sbjct: 403 RVRKR---RMPGKSWIELGSIINEFVS----GPDNNDEQLMMGEISEVLRCL 447
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 11 MISLHMNSGRIDLALAQFQQMSER-DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLK 69
++ + + G +D A F + E+ +IV W +MI+ Y ++ EA+ELF M + ++
Sbjct: 106 LVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM-EAEKIE 164
Query: 70 PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRV 129
D + LSAC +L + +G++I+S I+ + RR+
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRK------------------------RRL 200
Query: 130 VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDD 189
+D +LL+ Y K G+ AR++FD +DV +T+MI GY NG +
Sbjct: 201 A-------MDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQE 253
Query: 190 ALELFRAMTKEGPR------PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
+LELF+ M PN T +L S + GK+ S I D ++
Sbjct: 254 SLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIM---DYNLKP 310
Query: 244 GNA----LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEA 292
A ++ ++ ++G + +A + N + +TV W +++ A + HG LGEE
Sbjct: 311 REAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 109/207 (52%), Gaps = 6/207 (2%)
Query: 181 YVQNGLNDDALELFRAMTKEGPR-PNSFTLAAMLSVSS--RGASLNHGKQIHASAIRSRE 237
Y+++G AL FR ++ P +SF++ + VSS + +SL+ G+QIHA +
Sbjct: 38 YLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGF 96
Query: 238 DLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
+ I + +L+ Y+ G +D A++VF+ + V W++MI A ++ EAIELF+
Sbjct: 97 NAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFK 156
Query: 298 KMLALGIEPDHITYVGVLSACTHVGLVEQGRS-YFNLMASVHKIEPTLSHYACMIDLYGR 356
+M A IE D + LSAC +G V+ G Y + ++ L+ ++++Y +
Sbjct: 157 RMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVK 216
Query: 357 AGLLQEAFKFIENMPIEPDVIAWGSLL 383
+G ++A K + + DV + S++
Sbjct: 217 SGETEKARKLFDE-SMRKDVTTYTSMI 242
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML- 63
+T N ++++++ SG + A F + +D+ T+ SMI GY +G +E+LELF M
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 64 ----QDSSLKPDKFTLASTLSACTNLENMNLGKQ-IHSYIIRTEFDISGAVQNALISMYA 118
QD+ + P+ T L AC++ + GK+ S I+ A ++ ++
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 119 KTGGVEVARRVVEQSEISDLDAIAFTAL----LDGYAKLGDITPARQIFDSLRNRDVVA- 173
++G ++ A + Q I I T L L G +LG+ R+IF+ +RD V
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGE-EVQRRIFE--LDRDHVGD 380
Query: 174 WTAMIVGYVQNGLNDD 189
+ A+ Y G+ D+
Sbjct: 381 YVALSNIYASKGMWDE 396
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 39 WNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYI 98
+N++I Y G K +L LF+ ML S ++P+ T S + A + +++ G +H
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLA-SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 99 IRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITP 158
++ F VQ + + Y + G +E +R++ + +I + +A +LLD + G++
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFD--DILNPCVVACNSLLDACGRNGEMDY 170
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGP---RPNSFTLAAMLSV 215
A + F + DVV+WT +I G+ + GL+ AL +F M + PN T ++LS
Sbjct: 171 AFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSS 230
Query: 216 SSR--GASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDT 273
+ + GKQIH + L+ ++G AL+ MY KAG ++ A +F+ I +
Sbjct: 231 CANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI-RDKKV 289
Query: 274 VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNL 333
+W+++I ALA +G ++A+E+FE M + + P+ IT + +L+AC LV+ G F+
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSS 349
Query: 334 MASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVD 393
+ S +KI PT HY C++DL GRAGLL +A FI+++P EPD G+LL +CK+++N +
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTE 409
Query: 394 LAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKK 443
L ++L+ ++P + G Y AL+ + W +A K+RK M + G++K
Sbjct: 410 LGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 40/309 (12%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+ + N ++ +G +D A FQ+M D+V+W ++I G+++ G +AL +F M+Q
Sbjct: 152 VVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQ 211
Query: 65 D--SSLKPDKFTLASTLSACTNLEN--MNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
+ + + P++ T S LS+C N + + LGKQIH Y++ E ++ + AL+ MY K
Sbjct: 212 NERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKA 271
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G +E+ A IFD +R++ V AW A+I
Sbjct: 272 GDLEM---------------------------------ALTIFDQIRDKKVCAWNAIISA 298
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
NG ALE+F M PN TL A+L+ +R ++ G Q+ +S + +
Sbjct: 299 LASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIP 358
Query: 241 ISVG-NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
S ++ + +AG + +A + + D +++ A H E + +++
Sbjct: 359 TSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQL 418
Query: 300 LALGIEPDH 308
+G++P H
Sbjct: 419 --IGLQPQH 425
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 225/444 (50%), Gaps = 39/444 (8%)
Query: 14 LHMNSGR-IDLALAQFQQMSERDIVTWNSMIAG-YNQHGFDKE--ALELFSSMLQDSS-- 67
LH++S + AL+ +Q+ + +N++I+ + H + A L+ +L S
Sbjct: 48 LHLSSTVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNF 107
Query: 68 LKPDKFTLASTLSACT-NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVA 126
++P++FT S A + + G+ +H+++++
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKF------------------------- 142
Query: 127 RRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGL 186
E + D AL+ YA G + AR +F+ +R D+ W ++ Y +
Sbjct: 143 ------LEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEE 196
Query: 187 NDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNA 246
D E+ + RPN +L A++ + G H +++ L+ VG +
Sbjct: 197 IDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTS 256
Query: 247 LITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
LI +Y+K G + A+KVF+ + D +++MI LA HG G+E IEL++ +++ G+ P
Sbjct: 257 LIDLYSKCGCLSFARKVFDEMS-QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVP 315
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKF 366
D T+V +SAC+H GLV++G FN M +V+ IEP + HY C++DL GR+G L+EA +
Sbjct: 316 DSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEEC 375
Query: 367 IENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKW 426
I+ MP++P+ W S L S + + + + +IA + LL +E +NSG Y L+N+Y+ +W
Sbjct: 376 IKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRW 435
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWL 450
D K R+LM D V K G S L
Sbjct: 436 TDVEKTRELMKDHRVNKSPGISTL 459
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGY---NQHGFDKEALELFSSMLQDSS 67
++ + N G++ A + F+++ E D+ TWN+++A Y + D+E L LF M
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM----Q 211
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
++P++ +L + + +C NL G H Y+++ ++ V +LI +Y+K G + AR
Sbjct: 212 VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
+V FD + RDV + AMI G +G
Sbjct: 272 KV---------------------------------FDEMSQRDVSCYNAMIRGLAVHGFG 298
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS--AIRSREDLSISVGN 245
+ +EL++++ +G P+S T +S S ++ G QI S A+ E G
Sbjct: 299 QEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYG- 357
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
L+ + ++G ++ A++ + + W S + + HG E + +L L E
Sbjct: 358 CLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFE 417
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/450 (32%), Positives = 223/450 (49%), Gaps = 46/450 (10%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSER-DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSS 67
N +I + G+I A F +M + D VT+++++ GY Q AL+LF M + S
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIM-RKSE 222
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
+ + TL S LSA ++L +++ + H I+ D
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLD----------------------- 259
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
LD TAL+ Y K G I+ AR+IFD +DVV W MI Y + GL
Sbjct: 260 ----------LDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLL 309
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
++ + L R M E +PNS T +LS + + G+ + R L +G AL
Sbjct: 310 EECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTAL 369
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA--LGIE 305
+ MYAK G ++ A ++FN + + D SW++MI HGL EA+ LF KM +
Sbjct: 370 VDMYAKVGLLEKAVEIFNRM-KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVR 428
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
P+ IT++ VL+AC+H GLV +G F M + P + HY C++DL GRAG L+EA++
Sbjct: 429 PNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYE 488
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
I N+PI D AW +LL++C+VY N DL + RL + + LA ++ G
Sbjct: 489 LIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN 548
Query: 426 WEDAAKIRKLMND--RGVKKEQGSSWLEIQ 453
E + L N+ +G +KE G S +EI+
Sbjct: 549 PE-----KSLDNELNKG-RKEAGYSAIEIE 572
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 181/364 (49%), Gaps = 36/364 (9%)
Query: 21 IDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLS 80
I A + F+ +S ++ +N+MI GY+ + A +F+ L+ L D+F+ +TL
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQ-LRAKGLTLDRFSFITTLK 133
Query: 81 ACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDA 140
+C+ +++G+ +H +R+ F + ++NALI Y G + AR+V ++ S +DA
Sbjct: 134 SCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQS-VDA 192
Query: 141 IAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
+ F+ L++GY + V+ A+ AL+LFR M K
Sbjct: 193 VTFSTLMNGYLQ-------------------VSKKAL------------ALDLFRIMRKS 221
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
N TL + LS S L+ + H I+ DL + + ALI MY K G I +A
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 261 QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
+++F+ D V+W+ MI A+ GL EE + L +M ++P+ T+VG+LS+C +
Sbjct: 282 RRIFD-CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAY 340
Query: 321 VGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWG 380
GR+ +L+ +I ++D+Y + GLL++A + M + DV +W
Sbjct: 341 SEAAFVGRTVADLLEE-ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWT 398
Query: 381 SLLS 384
+++S
Sbjct: 399 AMIS 402
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 164/383 (42%), Gaps = 53/383 (13%)
Query: 137 DLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRA 196
D D A + LL ++ + DI A IF+ + N ++ + MI GY + + A +F
Sbjct: 57 DKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQ 115
Query: 197 MTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGS 256
+ +G + F+ L SR ++ G+ +H A+RS + + NALI Y G
Sbjct: 116 LRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGK 175
Query: 257 IDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLS 316
I +A+KVF+ + + D V++S+++ Q A++LF M + + T + LS
Sbjct: 176 ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLS 235
Query: 317 ACTHVGLVEQGRSYFNLMASV------HKIEPTLSHYA---------------------- 348
A + +G + S L + H I + Y
Sbjct: 236 AISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVT 295
Query: 349 --CMIDLYGRAGLLQEAFKFIENMPIE---PDVIAWGSLLSSCKVYKNVDLAKIAAERLL 403
CMID Y + GLL+E + M E P+ + LLSSC + + + A+
Sbjct: 296 WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD--- 352
Query: 404 LIEPD----NSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIF 459
L+E + ++ +AL ++Y+ G E A +I M D+ VK SW + + +
Sbjct: 353 LLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVK-----SWTAM---ISGY 404
Query: 460 GAEDSLHPQKDEIYKMMDKIWEE 482
GA H E + +K+ EE
Sbjct: 405 GA----HGLAREAVTLFNKMEEE 423
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 202/373 (54%), Gaps = 16/373 (4%)
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC 268
L + + L K +H S L +S + L+ MY+ G + A VF +
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR 328
N +W +I A++G GE+AI++F + G PD + G+ AC +G V++G
Sbjct: 317 EKN-LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL 375
Query: 329 SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV 388
+F M+ + I P++ Y ++++Y G L EA +F+E MP+EP+V W +L++ +V
Sbjct: 376 LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRV 435
Query: 389 YKNVDLAKIAAERLLLIEPD--NSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQG 446
+ N++L AE + ++P N + V ++ + E K +++ GVK
Sbjct: 436 HGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGILH--GVK---- 489
Query: 447 SSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDK 506
SS E F A D+ P+ DE+++++ + + ++G++ +T LHD++ E K+
Sbjct: 490 SSMQE-------FRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKET 542
Query: 507 LLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFH 566
LL HSE++A A ++++ ++KNLR+C DCH A+K +S ++GRE+I RD+ RFH
Sbjct: 543 LLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFH 602
Query: 567 HFKDGFCSCRDYW 579
K+G C+C+DYW
Sbjct: 603 QMKNGACTCKDYW 615
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
++S ++++ ++ N G + A + F++MSE+++ TW +I + ++GF ++A+++FS +
Sbjct: 289 LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 348
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGG 122
+ ++ PD AC L +++ G +H + ++ I+ ++++ +L+ MYA G
Sbjct: 349 EGNI-PDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 123 VEVARRVVEQ 132
++ A VE+
Sbjct: 407 LDEALEFVER 416
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 232/449 (51%), Gaps = 38/449 (8%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N+++ + G + ++ F + E+D+++WNS+++ +G ++L+LFS M Q
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM-QFWGK 311
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGGVEVAR 127
+P S L+ C+ ++ GKQIH Y+++ FD+S VQ+ALI M
Sbjct: 312 RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDM----------- 360
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
Y K I + ++ SL ++ +++ + G+
Sbjct: 361 ----------------------YGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGIT 398
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRG--ASLNHGKQIHASAIRSREDLSISVGN 245
D +E+F M EG + TL+ +L S SL+ +H AI+S ++V
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSC 458
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
+LI Y K+G + ++KVF+ + N +S+I A++G+G + +++ +M + +
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDTPN-IFCLTSIINGYARNGMGTDCVKMLREMDRMNLI 517
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
PD +T + VLS C+H GLVE+G F+ + S + I P YACM+DL GRAGL+++A +
Sbjct: 518 PDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAER 577
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGK 425
+ + D +AW SLL SC++++N + + AAE L+ +EP+N Y ++ Y G
Sbjct: 578 LLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGD 637
Query: 426 WEDAAKIRKLMNDRGVKKEQGSSWLEIQN 454
+E + +IR++ R + +E G S + ++N
Sbjct: 638 FEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 177/381 (46%), Gaps = 40/381 (10%)
Query: 16 MNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTL 75
+ SG + A F +MS RD+VT+N +I+G +++G A+EL++ M+ L+ T
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS-CGLRESASTF 115
Query: 76 ASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEI 135
S LS C++ G Q+H +I F + V++AL+ +YA V+VA +
Sbjct: 116 PSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALK------- 168
Query: 136 SDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFR 195
+FD + +R++ ++ + Q G + E++
Sbjct: 169 --------------------------LFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYL 202
Query: 196 AMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS-ISVGNALITMYAKA 254
M EG N T M+ S + GKQ+H+ ++S ++S I V N L+ Y+
Sbjct: 203 RMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSAC 262
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
G + + + FN + D +SW+S++ A +G ++++LF KM G P ++
Sbjct: 263 GDLSGSMRSFNAV-PEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSF 321
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
L+ C+ ++ G+ + + +L + +ID+YG+ ++ + +++P
Sbjct: 322 LNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPC-L 380
Query: 375 DVIAWGSLLSS---CKVYKNV 392
++ SL++S C + K++
Sbjct: 381 NLECCNSLMTSLMHCGITKDI 401
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 2/246 (0%)
Query: 147 LDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNS 206
+D K G++ A + FD + RDVV + +I G + G + A+EL+ M G R ++
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 207 FTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNL 266
T ++LSV S G Q+H I ++ V +AL+ +YA +D A K+F+
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 267 ICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ 326
+ N V + ++ Q G + E++ +M G+ + +TY ++ C+H LV +
Sbjct: 173 MLDRNLAVC-NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYE 231
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
G+ +L+ + ++D Y G L + + +P E DVI+W S++S C
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVC 290
Query: 387 KVYKNV 392
Y +V
Sbjct: 291 ADYGSV 296
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 245/483 (50%), Gaps = 48/483 (9%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N ++ + S ++ A F +M + D+++WNS+++GY Q G +E + LF L S +
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLE-LHRSDV 152
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAV-QNALISMYAKTGGVEVAR 127
P++F+ + L+AC L LG IHS +++ + V N LI MY K G ++ A
Sbjct: 153 FPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAV 212
Query: 128 RVVEQSEISDL-----------------------------DAIAFTALLDGYAKLGDITP 158
V + E D D + + L+D + K GD
Sbjct: 213 LVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNN 272
Query: 159 ARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR 218
A Q+ + N + +W ++ GYV + + +A E F M G R + ++L+ +L+ +
Sbjct: 273 AFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAA 332
Query: 219 GASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF------NLICWNND 272
A + G IHA A + D + V +ALI MY+K G + +A+ +F NLI WN
Sbjct: 333 LAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNE- 391
Query: 273 TVSWSSMIIALAQHGLGEEAIELFEKM-LALGIEPDHITYVGVLSACTHVGL-VEQGRSY 330
MI A++G EAI+LF ++ ++PD T++ +L+ C+H + +E Y
Sbjct: 392 ------MISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGY 445
Query: 331 FNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYK 390
F +M + ++I+P++ H +I G+ G + +A + I+ D +AW +LL +C K
Sbjct: 446 FEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARK 505
Query: 391 NVDLAK-IAAERLLLIEPD-NSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
++ AK +AA+ + L + D + Y ++N+Y+ +W + +IRK+M + GV KE GSS
Sbjct: 506 DLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSS 565
Query: 449 WLE 451
W++
Sbjct: 566 WID 568
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 167/409 (40%), Gaps = 84/409 (20%)
Query: 38 TWNSMI---AGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
+W++++ A + G + A+EL + KPD L L N ++L +Q+
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELI-----NDGEKPDASPLVHLLRVSGNYGYVSLCRQL 77
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
H Y+ + F + + N+L+ Y + +E A +V + E+ D D I++ +L+ G
Sbjct: 78 HGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFD--EMPDPDVISWNSLVSG----- 130
Query: 155 DITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLS 214
YVQ+G + + LF + + PN F+ A L+
Sbjct: 131 --------------------------YVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 215 VSSRGASLNHGKQIHASAIR-SREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDT 273
+R G IH+ ++ E ++ VGN LI MY K G +D+A VF + DT
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM-EEKDT 223
Query: 274 VSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNL 333
VSW++++ + +++G E + F +M PD +TY ++ A G +
Sbjct: 224 VSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVTYNELIDAFVKSGDFNNAFQVLSD 279
Query: 334 MASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM------------------PIEPD 375
M + P S + ++ Y + EA +F M
Sbjct: 280 MPN-----PNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALA 334
Query: 376 VIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
V+ WGSL+ +C +D + A SAL ++YS CG
Sbjct: 335 VVPWGSLIHACAHKLGLDSRVVVA--------------SALIDMYSKCG 369
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 145/321 (45%), Gaps = 21/321 (6%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+ SWN +++ +G+++L L F QM D VT+N +I + + G A ++ S M
Sbjct: 221 KDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Query: 63 LQDSSLKPDKFTLASTLSACTNLEN----MNLGKQIHSYIIR-TEFDISGAVQNALISMY 117
P+ + + L+ N E ++HS +R E+ +S +
Sbjct: 281 PN-----PNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAV 335
Query: 118 AKTGGV--EVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWT 175
G + A ++ S + + +AL+D Y+K G + A +F ++ ++++ W
Sbjct: 336 VPWGSLIHACAHKLGLDSRV-----VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWN 390
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
MI GY +NG + +A++LF + +E +P+ FT +L+V S + +
Sbjct: 391 EMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMI 450
Query: 235 SREDLSISVGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEA 292
+ + SV + +LI + G + A++V + D V+W +++ A + + A
Sbjct: 451 NEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAA 510
Query: 293 IELFEKMLALG-IEPDHITYV 312
+ KM+ LG + D Y+
Sbjct: 511 KTVAAKMIELGDADKDEYLYI 531
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 241/447 (53%), Gaps = 51/447 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
+I ++ G + ++ F+ + E+D+V+WN++++G+ ++G KEAL +F++M ++ ++
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER-VEI 183
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+FTL+S + C +L+ + GKQ+H+ ++ T D+
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL------------------------- 218
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR-NRDVVAWTAMIVGYVQNGLNDD 189
+ TA++ Y+ +G I A ++++SL + D V ++I G ++N +
Sbjct: 219 ---------VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN---RN 266
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
E F M+++ RPN L++ L+ S + L GKQIH A+R+ + N L+
Sbjct: 267 YKEAFLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMD 324
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML--ALGIEPD 307
MY K G I A+ +F I + VSW+SMI A A +G G +A+E+F +M G+ P+
Sbjct: 325 MYGKCGQIVQARTIFRAI-PSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPN 383
Query: 308 HITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFI 367
+T++ V+SAC H GLV++G+ F +M +++ P HY C ID+ +AG +E ++ +
Sbjct: 384 SVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLV 443
Query: 368 ENMPIEPD-----VIAWGSLLSSCKVYKNVDLAKIAAERLL-LIEPDNSGAYSALANVYS 421
E M +E D W ++LS+C + ++ + A RL+ P+N+ Y ++N Y+
Sbjct: 444 ERM-MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYA 502
Query: 422 ACGKWEDAAKIRKLMNDRGVKKEQGSS 448
A GKW+ ++R + ++G+ K G S
Sbjct: 503 AMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 172/368 (46%), Gaps = 56/368 (15%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPD--KFTLASTLSACTNL 85
F ++ +RD+ + NS ++ + + G + L LF LQ PD T L AC+ L
Sbjct: 41 FDELPQRDLSSLNSQLSSHLRSGNPNDTLALF---LQIHRASPDLSSHTFTPVLGACSLL 97
Query: 86 ENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTA 145
G+Q+H+ +I+ A+TG I+ TA
Sbjct: 98 SYPETGRQVHALMIKQG---------------AETG------------------TISKTA 124
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
L+D Y+K G + + ++F+S+ +D+V+W A++ G+++NG +AL +F AM +E +
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEIS 184
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN 265
FTL++++ + L GKQ+HA + + DL + +G A+I+ Y+ G I+ A KV+N
Sbjct: 185 EFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYN 243
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH----- 320
+ + D V +S+I ++ +EA L + P+ L+ C+
Sbjct: 244 SLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLW 298
Query: 321 VGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWG 380
+G + N S K+ L +D+YG+ G + +A +P V++W
Sbjct: 299 IGKQIHCVALRNGFVSDSKLCNGL------MDMYGKCGQIVQARTIFRAIP-SKSVVSWT 351
Query: 381 SLLSSCKV 388
S++ + V
Sbjct: 352 SMIDAYAV 359
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 157 TPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVS 216
T A +FD L RD+ + + + ++++G +D L LF + + P +S T +L
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 217 SRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSW 276
S + G+Q+HA I+ + ALI MY+K G + ++ +VF + D VSW
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESV-EEKDLVSW 153
Query: 277 SSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMAS 336
++++ ++G G+EA+ +F M +E T V+ C + +++QG+ ++
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 337 VHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAK 396
+ L MI Y GL+ EA K ++ + D + SL+S C +N A
Sbjct: 214 TGRDLVVLG--TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 397 IAAER 401
+ R
Sbjct: 272 LLMSR 276
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 223/443 (50%), Gaps = 40/443 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ + +G I A F + + D+ WN MI GY GF + + LF+ ++Q +P
Sbjct: 147 IVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN-LMQHRGHQP 205
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ +T+ + S + + + +H++ ++ D V AL++MY++
Sbjct: 206 NCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMC-------- 257
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
I A +F+S+ D+VA +++I GY + G + +A
Sbjct: 258 -------------------------IASACSVFNSISEPDLVACSSLITGYSRCGNHKEA 292
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L LF + G +P+ +A +L + + GK++H+ IR +L I V +ALI M
Sbjct: 293 LHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDM 352
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y+K G + A +F I N VS++S+I+ L HG A E F ++L +G+ PD IT
Sbjct: 353 YSKCGLLKCAMSLFAGIPEKN-IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEIT 411
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+ +L C H GL+ +G+ F M S IEP HY M+ L G AG L+EAF+F+ ++
Sbjct: 412 FSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSL 471
Query: 371 --PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSA-LANVYSACGKWE 427
PI+ ++ G+LLS C+V++N LA++ AE + + Y L+NVY+ G+W+
Sbjct: 472 QKPIDSGIL--GALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWD 529
Query: 428 DAAKIRKLMNDRGVKKEQGSSWL 450
+ ++R +++ K G SW
Sbjct: 530 EVERLRDGISESYGGKLPGISWF 552
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 158/356 (44%), Gaps = 37/356 (10%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F ER + WNS+I Y + L LFS +L+ S +PD FT A
Sbjct: 63 FDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILR-SDTRPDNFTYACLARG------ 115
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
FD G I++ + G D I +A++
Sbjct: 116 -----------FSESFDTKGLRCIHGIAIVSGLG----------------FDQICGSAIV 148
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
Y+K G I A ++F S+ + D+ W MI+GY G D + LF M G +PN +
Sbjct: 149 KAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCY 208
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
T+ A+ S + L +HA ++ D VG AL+ MY++ I +A VFN I
Sbjct: 209 TMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSI 268
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
D V+ SS+I ++ G +EA+ LF ++ G +PD + VL +C + G
Sbjct: 269 S-EPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSG 327
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
+ + + + +E + + +ID+Y + GLL+ A +P E +++++ SL+
Sbjct: 328 KEVHSYVIRL-GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLI 381
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 15/247 (6%)
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPR 203
T L YA D+ AR++FD R V W ++I Y + L LF + + R
Sbjct: 44 TQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTR 103
Query: 204 PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
P++FT A + S + IH AI S G+A++ Y+KAG I A K+
Sbjct: 104 PDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKL 163
Query: 264 FNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGL 323
F I + D W+ MI+ G ++ I LF M G +P+ T V + S GL
Sbjct: 164 FCSI-PDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GL 217
Query: 324 VEQGRSYFNLMASVHKIEPTL-----SHYAC-MIDLYGRAGLLQEAFKFIENMPIEPDVI 377
++ S + SVH + S+ C ++++Y R + A ++ EPD++
Sbjct: 218 IDP--SLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLV 274
Query: 378 AWGSLLS 384
A SL++
Sbjct: 275 ACSSLIT 281
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 203/405 (50%), Gaps = 39/405 (9%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGY-NQHGFDKEALELF 59
R + + SW +S + SG A F M ER+IV+WN+M+ GY + H +D EAL+
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWD-EALDFL 383
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+ M Q+ D TL L+ C+ + ++ +GKQ H +I R +D + V NAL
Sbjct: 384 TLMRQEIE-NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL------ 436
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN-RDVVAWTAMI 178
LD Y K G + A F + RD V+W A++
Sbjct: 437 ---------------------------LDMYGKCGTLQSANIWFRQMSELRDEVSWNALL 469
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRED 238
G + G ++ AL F M E +P+ +TLA +L+ + +LN GK IH IR
Sbjct: 470 TGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYK 528
Query: 239 LSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
+ + + A++ MY+K D A +VF D + W+S+I ++G +E ELF
Sbjct: 529 IDVVIRGAMVDMYSKCRCFDYAIEVFKEAA-TRDLILWNSIIRGCCRNGRSKEVFELFML 587
Query: 299 MLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG 358
+ G++PDH+T++G+L AC G VE G YF+ M++ + I P + HY CMI+LY + G
Sbjct: 588 LENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
Query: 359 LLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL 403
L + +F+ MP +P + + +C+ Y+ L AA+RL+
Sbjct: 648 CLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 187/360 (51%), Gaps = 8/360 (2%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F ++ V+WN ++ Y + GF+ EA+ +F ML+ +++P T++S + AC+
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLE-LNVRPLNHTVSSVMLACSRSLA 278
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALL 147
+ +GK IH+ ++ V ++ MY K +E ARRV +Q+ DL + +T+ +
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS--WTSAM 336
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
GYA G AR++FD + R++V+W AM+ GYV D+AL+ M +E ++
Sbjct: 337 SGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV 396
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
TL +L+V S + + GKQ H R D ++ V NAL+ MY K G++ +A F +
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
D VSW++++ +A+ G E+A+ FE M + +P T +L+ C ++ + G
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLG 515
Query: 328 RSYFN-LMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
++ L+ +KI+ + M+D+Y + A + + D+I W S++ C
Sbjct: 516 KAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGC 572
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 183/407 (44%), Gaps = 67/407 (16%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N I + G +D A F++M ERD +WN++I Q+G E +F M +D +
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDG-V 158
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
+ + + A L +C + ++ L +Q+H +++ Y +G V++
Sbjct: 159 RATETSFAGVLKSCGLILDLRLLRQLHCAVVK----------------YGYSGNVDLE-- 200
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
T+++D Y K ++ AR++FD + N V+W ++ Y++ G ND
Sbjct: 201 ---------------TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+A+ +F M + RP + T+++++ SR +L GK IHA A++ V ++
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI---- 304
MY K +++A++VF+ + D SW+S + A GL EA ELF+ M I
Sbjct: 306 DMYVKCDRLESARRVFDQT-RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWN 364
Query: 305 ---------------------------EPDHITYVGVLSACTHVGLVEQGRSYFNLMASV 337
D++T V +L+ C+ + V+ G+ +
Sbjct: 365 AMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR- 423
Query: 338 HKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
H + + ++D+YG+ G LQ A + M D ++W +LL+
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLT 470
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 199/347 (57%), Gaps = 9/347 (2%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
+ SW +MI+ ++ A F +M E+ +V+WN+M++GY Q+GF ++AL LF+ ML+
Sbjct: 198 VVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLR 257
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
++P++ T +SAC+ + +L + + I ++ V+ AL+ M+AK ++
Sbjct: 258 -LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQN 184
ARR+ + + + + + A++ GY ++GD++ ARQ+FD++ R+VV+W ++I GY N
Sbjct: 317 SARRIFNELG-TQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHN 375
Query: 185 GLNDDALELFRAMTKEG-PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
G A+E F M G +P+ T+ ++LS A L G I +++ L+ S
Sbjct: 376 GQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSG 435
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
+LI MYA+ G++ A++VF+ + D VS++++ A A +G G E + L KM G
Sbjct: 436 YRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG 494
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
IEPD +TY VL+AC GL+++G+ F + + P HYACM
Sbjct: 495 IEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 190/419 (45%), Gaps = 69/419 (16%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F ++ ++ NSM +++ + L L+ + + PD F+ + +
Sbjct: 63 FDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSR-CGIMPDAFSFPVVIKSAGRF-- 119
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQ--------------- 132
G + + + F V+N ++ MY K VE AR+V +Q
Sbjct: 120 ---GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 133 ----------SEISDL----DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMI 178
++ D+ D +++T ++ G+AK+ D+ AR+ FD + + VV+W AM+
Sbjct: 177 YWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAML 236
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRED 238
GY QNG +DAL LF M + G RPN T ++S S A + + + R
Sbjct: 237 SGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Query: 239 LSISVGNALITMYAKAGSIDNAQKVF-------NLICWN--------------------- 270
L+ V AL+ M+AK I +A+++F NL+ WN
Sbjct: 297 LNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDT 356
Query: 271 ---NDTVSWSSMIIALAQHGLGEEAIELFEKMLALG-IEPDHITYVGVLSACTHVGLVEQ 326
+ VSW+S+I A +G AIE FE M+ G +PD +T + VLSAC H+ +E
Sbjct: 357 MPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLEL 416
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSS 385
G + + ++I+ S Y +I +Y R G L EA + + M E DV+++ +L ++
Sbjct: 417 GDCIVDYIRK-NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTA 473
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 33/229 (14%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R++ +WN MIS + G + A F M +R++V+WNS+IAGY +G A+E F M
Sbjct: 329 RNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM 388
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ KPD+ T+ S LSAC ++ ++ LG I YI + + ++ + +LI MYA+ G
Sbjct: 389 IDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGN 448
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ A+RV + E+ + D +++ L +A GD
Sbjct: 449 LWEAKRVFD--EMKERDVVSYNTLFTAFAANGD--------------------------- 479
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS 231
G+ + L L M EG P+ T ++L+ +R L G++I S
Sbjct: 480 --GV--ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKS 524
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 177/323 (54%), Gaps = 17/323 (5%)
Query: 144 TALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQ-----NGLNDDALELFRAMT 198
T LL YAK GD+ AR++FD + R V W AMI GY N A+ LFR +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 199 --KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA--SAIRSREDLSISVGNALITMYAKA 254
G RP T+ +LS S+ L G +H + ++ + +G AL+ MY+K
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
G ++NA VF L+ N +W+SM LA +G G E L +M GI+P+ IT+ +
Sbjct: 271 GCLNNAFSVFELMKVKN-VFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSL 329
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
LSA H+GLVE+G F M + + P + HY C++DL G+AG +QEA++FI MPI+P
Sbjct: 330 LSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKP 389
Query: 375 DVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDN---SGA----YSALANVYSACGKWE 427
D I SL ++C +Y + + + LL IE ++ SG+ Y AL+NV + GKW
Sbjct: 390 DAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWV 449
Query: 428 DAAKIRKLMNDRGVKKEQGSSWL 450
+ K+RK M +R +K G S++
Sbjct: 450 EVEKLRKEMKERRIKTRPGYSFV 472
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDK------EALELFSSM-L 63
++ + +G + A F +M ER VTWN+MI GY H DK +A+ LF
Sbjct: 153 LLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK-DKGNHNARKAMVLFRRFSC 211
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEF--DISGAVQNALISMYAKTG 121
S ++P T+ LSA + + +G +H YI + F ++ + AL+ MY+K G
Sbjct: 212 CGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCG 271
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
+ A +F+ ++ ++V WT+M G
Sbjct: 272 C---------------------------------LNNAFSVFELMKVKNVFTWTSMATGL 298
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS- 240
NG ++ L M + G +PN T ++LS + G ++ S +++R ++
Sbjct: 299 ALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKS-MKTRFGVTP 357
Query: 241 -ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEE 291
I ++ + KAG I A + + D + S+ A + +G +GEE
Sbjct: 358 VIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEE 412
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 184/337 (54%), Gaps = 6/337 (1%)
Query: 116 MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWT 175
MY G + A +V + E+ + + + + ++ G LGD A + + NR VV+WT
Sbjct: 1 MYLVGGNMIDAHKVFD--EMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWT 58
Query: 176 AMIVGYVQNGLNDDALELF-RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA-SAI 233
+I GY + +A+ LF R + + +PN T+ A+L L +HA
Sbjct: 59 TIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGK 118
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVF-NLICWNNDTVSWSSMIIALAQHGLGEEA 292
R I V N+LI YAK G I +A K F + + VSW++MI A A HG+G+EA
Sbjct: 119 RGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEA 178
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG-RSYFNLMASVHKIEPTLSHYACMI 351
+ +F+ M LG++P+ +T + VL+AC+H GL E+ +FN M + +KI P + HY C++
Sbjct: 179 VSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLV 238
Query: 352 DLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSG 411
D+ R G L+EA K +PIE + W LL +C VY + +LA+ +L+ +E + G
Sbjct: 239 DMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGG 298
Query: 412 AYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSS 448
Y ++N++ G++ DA + RK M+ RGV K G S
Sbjct: 299 DYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 335
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 145/305 (47%), Gaps = 38/305 (12%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
R+ +WN+MI+ N G + AL ++M R +V+W ++I GY + KEA+ LFS M
Sbjct: 21 RNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRM 80
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEF---DISGAVQNALISMYAK 119
+ ++KP++ T+ + L A NL ++ + +H+Y+ + F DI V N+LI YAK
Sbjct: 81 VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR--VTNSLIDAYAK 138
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIV 179
G ++ A + F + +G +++V+WT MI
Sbjct: 139 CGCIQSAFKF-------------FIEIPNG------------------RKNLVSWTTMIS 167
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
+ +G+ +A+ +F+ M + G +PN T+ ++L+ S G + + + +
Sbjct: 168 AFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKI 227
Query: 240 SISVGN--ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
+ V + L+ M + G ++ A+K+ I V W ++ A + + E A +
Sbjct: 228 TPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTR 287
Query: 298 KMLAL 302
K++ L
Sbjct: 288 KLMEL 292
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 204/392 (52%), Gaps = 21/392 (5%)
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
A+E+ ++ EG + L + + +L K +H S IS N++I
Sbjct: 165 AVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIE 224
Query: 250 MYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
MY+ GS+++A VFN + N +W +I A++G GE+AI+ F + G +PD
Sbjct: 225 MYSGCGSVEDALTVFNSMPERN-LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGE 283
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
+ + AC +G + +G +F M + I P + HY ++ + G L EA +F+E+
Sbjct: 284 MFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVES 343
Query: 370 MPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPD--NSGAYSALANVYSACGKWE 427
M EP+V W +L++ +V+ ++ L + + ++ N + + L V S+
Sbjct: 344 M--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSS----- 396
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLG 487
L+ ++ + +G ++ + A D P+ E+Y + + E + ++G
Sbjct: 397 ------DLVKEKLQRMAKGPNY-----GIRYMAAGDISRPENRELYMALKSLKEHMIEIG 445
Query: 488 FIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIK 547
++P + LHD++ E KD+ L H+E+ A + TP + +R+MKNLR+C DCH A+K
Sbjct: 446 YVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALK 505
Query: 548 FISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
+SK++GRE+I RD RFHH KDG CSCR+YW
Sbjct: 506 LMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
I+++N +I ++ G ++ AL F M ER++ TW +I + ++G ++A++ FS Q
Sbjct: 216 ISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQ 275
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQN--ALISMYAKTGG 122
+ + KPD AC L +MN G +H + E+ I +++ +L+ M A+ G
Sbjct: 276 EGN-KPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGY 333
Query: 123 VEVARRVVEQSE 134
++ A R VE E
Sbjct: 334 LDEALRFVESME 345
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
D A+ ++++ Y+ G + A +F+S+ R++ W +I + +NG +DA++ F
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN--ALITMYAKAGS 256
+EG +P+ + +N G +H ++ + + + +L+ M A+ G
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGY 333
Query: 257 IDNAQKVFNLICWNNDTVSWSSMIIALAQHG---LGEEAIELFEKMLA 301
+D A + + N D W +++ HG LG+ ++ E++ A
Sbjct: 334 LDEALRFVESMEPNVDL--WETLMNLSRVHGDLILGDRCQDMVEQLDA 379
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 203/385 (52%), Gaps = 16/385 (4%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGY-NQHGFDKEALELFSSMLQDSS 67
N +I + G ++ + F + +++IV WN++++GY N+ G L LF MLQ
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG--PICLSLFLQMLQ-MG 411
Query: 68 LKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR 127
+P ++T ++ L +C E +Q+HS I+R ++ + V ++L+ YAK + A
Sbjct: 412 FRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
+++ + + + Y++ G + ++ +L D V+W I ++ +
Sbjct: 468 LLLDWAS-GPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYH 526
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS---VG 244
++ +ELF+ M + RP+ +T ++LS+ S+ L G IH + ++ D S + V
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHG--LITKTDFSCADTFVC 584
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
N LI MY K GSI + KVF + ++W+++I L HG G+EA+E F++ L+LG
Sbjct: 585 NVLIDMYGKCGSIRSVMKVFEET-REKNLITWTALISCLGIHGYGQEALEKFKETLSLGF 643
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
+PD ++++ +L+AC H G+V++G F M + +EP + HY C +DL R G L+EA
Sbjct: 644 KPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAE 702
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVY 389
I MP D W + L C +
Sbjct: 703 HLIREMPFPADAPVWRTFLDGCNRF 727
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 211/459 (45%), Gaps = 46/459 (10%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ 64
I+ N +IS + G +A FQ DIV+WN++I + +AL+LF SM
Sbjct: 250 ISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM-P 308
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
+ P++ T S L + ++ ++ G+QIH +I+ + + NALI YAK G +E
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 125 VARRVVEQSEISDLDAIAFTALLDGYA-KLGDITPA---RQIFDSLRNRDVVAWTAMIVG 180
+R + I D + + + ALL GYA K G I + + + R + TA+
Sbjct: 369 DSRLCFDY--IRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTAL--- 423
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIH--ASAIRSRED 238
++ + +L + + G N + L++++ ++ +N + AS S
Sbjct: 424 --KSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP 481
Query: 239 LSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEK 298
L+I G +Y++ G + K+ + + DTVSW+ I A ++ EE IELF+
Sbjct: 482 LNIVAG-----IYSRRGQYHESVKLISTL-EQPDTVSWNIAIAACSRSDYHEEVIELFKH 535
Query: 299 MLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC--------M 350
ML I PD T+V +LS C+ + + G S L+ T + ++C +
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLI--------TKTDFSCADTFVCNVL 587
Query: 351 IDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV--YKNVDLAKIAAERLLLIEPD 408
ID+YG+ G ++ K E E ++I W +L+S + Y L K L +PD
Sbjct: 588 IDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPD 646
Query: 409 NSGAYSALANVYSAC---GKWEDAAKIRKLMNDRGVKKE 444
+ ++ +AC G ++ + + M D GV+ E
Sbjct: 647 R----VSFISILTACRHGGMVKEGMGLFQKMKDYGVEPE 681
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 185/396 (46%), Gaps = 49/396 (12%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS 61
L+ + N +ISL+ G + LA F QM ER+ V++N++I GY+++G +A +FS
Sbjct: 46 LQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE 105
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M L P++ T++ LS C +L+ + G Q+H ++
Sbjct: 106 MRYFGYL-PNQSTVSGLLS-CASLD-VRAGTQLHGLSLKY-------------------- 142
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
G+ +A DA T LL Y +L + A Q+F+ + + + W M+
Sbjct: 143 GLFMA------------DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
G + + FR + + G + +L S L+ KQ+H SA + D I
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 242 SVGNALITMYAKAGSIDNAQKVF-NLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
SV N+LI+ Y K G+ A+++F + W D VSW+++I A A+ +A++LF M
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSW--DIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
G P+ TYV VL + V L+ GR ++ + E + +ID Y + G L
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK-NGCETGIVLGNALIDFYAKCGNL 367
Query: 361 QEA---FKFIENMPIEPDVIAWGSLLSSCKVYKNVD 393
+++ F +I + +++ W +LLS Y N D
Sbjct: 368 EDSRLCFDYIR----DKNIVCWNALLSG---YANKD 396
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 177/399 (44%), Gaps = 69/399 (17%)
Query: 19 GRIDL---ALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQ-DSSLKPDKFT 74
GR+DL A F+ M + + TWN M++ GF KE + F +++ +SL F
Sbjct: 160 GRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFL 219
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSE 134
L + ++++++ KQ+H + D +V N+LIS
Sbjct: 220 --GVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLIS------------------- 258
Query: 135 ISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELF 194
Y K G+ A ++F + D+V+W A+I ++ AL+LF
Sbjct: 259 --------------AYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLF 304
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
+M + G PN T ++L VSS L+ G+QIH I++ + I +GNALI YAK
Sbjct: 305 VSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKC 364
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
G++++++ F+ I + + V W++++ A G + LF +ML +G P T+
Sbjct: 365 GNLEDSRLCFDYI-RDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTA 422
Query: 315 LSACT-------HVGLVEQG---RSYF--NLMASVHKIE--------------PT-LSHY 347
L +C H +V G Y +LM S K + PT +
Sbjct: 423 LKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL 482
Query: 348 ACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
+ +Y R G E+ K I + +PD ++W +++C
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 35/278 (12%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
S+ NI+ ++ G+ ++ + + D V+WN IA ++ + +E +ELF ML
Sbjct: 478 SVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHML 537
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGA-VQNALISMYAKTGG 122
Q S+++PDK+T S LS C+ L ++ LG IH I +T+F + V N LI MY K G
Sbjct: 538 Q-SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGS 596
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
+ +V E++ R ++++ WTA+I
Sbjct: 597 IRSVMKVFEET---------------------------------REKNLITWTALISCLG 623
Query: 183 QNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS 242
+G +ALE F+ G +P+ + ++L+ G + G + + +
Sbjct: 624 IHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMD 683
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMI 280
+ + A+ G + A+ + + + D W + +
Sbjct: 684 HYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 141/287 (49%), Gaps = 20/287 (6%)
Query: 150 YAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTL 209
Y KLG+++ A ++FD + R+ V++ +I GY + G D A +F M G PN T+
Sbjct: 59 YEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTV 118
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSREDLSIS-VGNALITMYAKAGSIDNAQKVFNLIC 268
+ +LS +S + G Q+H +++ ++ + VG L+ +Y + ++ A++VF +
Sbjct: 119 SGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMP 176
Query: 269 WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR 328
+ + +W+ M+ L G +E + F +++ +G +++GVL + V ++ +
Sbjct: 177 FKS-LETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISK 235
Query: 329 SYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKV 388
+ A+ ++ +S +I YG+ G A + ++ D+++W +++ +
Sbjct: 236 Q-LHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAG-SWDIVSWNAIICATAK 293
Query: 389 YKNVDLAKIAAERLLLIEPD-----NSGAYSALANVYS-----ACGK 425
+N + A +L + P+ N G Y ++ V S +CG+
Sbjct: 294 SEN----PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDL--SISVGNALITMYAKAGSIDNAQKVFNL 266
+ ++L+V + S K +HA +I L + V N +I++Y K G + A KVF+
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 267 ICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ 326
+ N VS++++I +++G ++A +F +M G P+ T G+LS C + V
Sbjct: 75 MPERNK-VSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLD-VRA 131
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLS 384
G L C++ LYGR LL+ A + E+MP + + W ++S
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK-SLETWNHMMS 188
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 194/373 (52%), Gaps = 37/373 (9%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ + G + AL F M E+D+++W ++I+ ++ G +A+ +F ML L P
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL-P 282
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
++FT+ S L AC+ + + G+Q+HS +++ R++
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVK---------------------------RMI 315
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+ D T+L+D YAK G+I+ R++FD + NR+ V WT++I + + G ++A
Sbjct: 316 KT------DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEA 369
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
+ LFR M + N+ T+ ++L +L GK++HA I++ + ++ +G+ L+ +
Sbjct: 370 ISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWL 429
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
Y K G +A V + + D VSW++MI + G EA++ ++M+ G+EP+ T
Sbjct: 430 YCKCGESRDAFNVLQQL-PSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 311 YVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
Y L AC + + GRS ++ H + A +I +Y + G + EAF+ ++M
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAFRVFDSM 547
Query: 371 PIEPDVIAWGSLL 383
P E ++++W +++
Sbjct: 548 P-EKNLVSWKAMI 559
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 190/380 (50%), Gaps = 41/380 (10%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSL 68
N +IS + G + A F M E++ VTW +MI GY ++G + EA LF ++
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARR 128
++ L+ C+ LG+Q+H +++ V V
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVK----------------------VGVGNL 218
Query: 129 VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLND 188
+VE S L+ YA+ G++T A + FD + +DV++WTA+I + G
Sbjct: 219 IVESS------------LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGI 266
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
A+ +F M PN FT+ ++L S +L G+Q+H+ ++ + VG +L+
Sbjct: 267 KAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLM 326
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDH 308
MYAK G I + +KVF+ + N +TV+W+S+I A A+ G GEEAI LF M + ++
Sbjct: 327 DMYAKCGEISDCRKVFDGMS-NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANN 385
Query: 309 ITYVGVLSACTHVGLVEQGRSYFNLMASVHK--IEPTLSHYACMIDLYGRAGLLQEAFKF 366
+T V +L AC VG + G+ L A + K IE + + ++ LY + G ++AF
Sbjct: 386 LTVVSILRACGSVGALLLGK---ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442
Query: 367 IENMPIEPDVIAWGSLLSSC 386
++ +P DV++W +++S C
Sbjct: 443 LQQLP-SRDVVSWTAMISGC 461
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 159/315 (50%), Gaps = 35/315 (11%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G I F MS R+ VTW S+IA + + GF +EA+ LF +++ L
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR-IMKRRHLIA 383
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVV 130
+ T+ S L AC ++ + LGK++H+ II+ + + + + L+ +Y K G A V+
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 131 EQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDA 190
+Q L +RDVV+WTAMI G G +A
Sbjct: 444 QQ---------------------------------LPSRDVVSWTAMISGCSSLGHESEA 470
Query: 191 LELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITM 250
L+ + M +EG PN FT ++ L + SL G+ IH+ A ++ ++ VG+ALI M
Sbjct: 471 LDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHM 530
Query: 251 YAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHIT 310
YAK G + A +VF+ + N VSW +MI+ A++G EA++L +M A G E D
Sbjct: 531 YAKCGFVSEAFRVFDSMPEKN-LVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI 589
Query: 311 YVGVLSACTHVGLVE 325
+ +LS C + L E
Sbjct: 590 FATILSTCGDIELDE 604
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 13/166 (7%)
Query: 226 KQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQ 285
K+IHA A++ +D I GN LI+ + G + A+KVF+ + N TV+W++MI +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKN-TVTWTAMIDGYLK 160
Query: 286 HGLGEEAIELFEKMLALGIE-PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK----I 340
+GL +EA LFE + GI + +V +L+ C+ E GR M V +
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIV 220
Query: 341 EPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
E +L ++ Y + G L A + + M E DVI+W +++S+C
Sbjct: 221 ESSLVYF------YAQCGELTSALRAFDMME-EKDVISWTAVISAC 259
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 202/422 (47%), Gaps = 70/422 (16%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKP 70
++ ++ G++ LA F ++ ERDIV W +MIAG + EAL LF +M+ + + P
Sbjct: 255 LVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYP 314
Query: 71 DKFTLASTLSACTNLENMNLGKQIHSYIIRTE------FDISGAVQ-------------- 110
+ L + L +++ + LGK++H+++++++ F SG +
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 111 ------------NALISMYAKTGGVEVARRVV--EQSE---------------ISDLDAI 141
AL+S YA G + A R + Q E ++L AI
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI 434
Query: 142 A--------------------FTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
T+L+ Y+K G ++FD L R+V AWTAMI Y
Sbjct: 435 KQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSI 241
V+N +E+FR M RP+S T+ +L+V S +L GK++H ++ +
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP 554
Query: 242 SVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLA 301
V +I MY K G + +A F+ + +++W+++I A + L +AI FE+M++
Sbjct: 555 FVSARIIKMYGKCGDLRSANFSFDAVAVKG-SLTWTAIIEAYGCNELFRDAINCFEQMVS 613
Query: 302 LGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQ 361
G P+ T+ VLS C+ G V++ +FNLM ++ ++P+ HY+ +I+L R G ++
Sbjct: 614 RGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVE 673
Query: 362 EA 363
EA
Sbjct: 674 EA 675
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 206/443 (46%), Gaps = 54/443 (12%)
Query: 11 MISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDK--EALELFSSMLQDSSL 68
++ ++ G + A F + + ++ +WN+++ G G + + L F+ M ++ +
Sbjct: 152 LVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM-RELGV 210
Query: 69 KPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALI-SMYAKTGGVEVAR 127
+ ++L++ + + G + H+ A++N L S++ KT
Sbjct: 211 DLNVYSLSNVFKSFAGASALRQGLKTHAL----------AIKNGLFNSVFLKT------- 253
Query: 128 RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLN 187
+L+D Y K G + AR++FD + RD+V W AMI G N
Sbjct: 254 -----------------SLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQ 296
Query: 188 DDALELFRAM-TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSIS-VGN 245
+AL LFR M ++E PNS L +L V +L GK++HA ++S+ + V +
Sbjct: 297 WEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHS 356
Query: 246 ALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
LI +Y K G + + ++VF + +SW++++ A +G ++A+ M G
Sbjct: 357 GLIDLYCKCGDMASGRRVF-YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR 415
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
PD +T VL C + ++QG+ + A + P +S ++ +Y + G+ + +
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKE-IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIR 474
Query: 366 FIENMPIEPDVIAWGSLLSSCKVYKNVDL-AKIAAERLLLI---EPDNSGAYSALANVYS 421
+ + + +V AW +++ C V +N DL A I RL+L+ PD+ + V +
Sbjct: 475 LFDRLE-QRNVKAWTAMI-DCYV-ENCDLRAGIEVFRLMLLSKHRPDS----VTMGRVLT 527
Query: 422 ACGKWEDAAKIRKLMNDRGVKKE 444
C + A K+ K ++ +KKE
Sbjct: 528 VCSDLK-ALKLGKELHGHILKKE 549
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 173/422 (40%), Gaps = 80/422 (18%)
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
L+ + + T ++ L AC +++ GKQ+H +I I+G N +
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHI-----RINGLESNEFLR------- 149
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYV 182
T L+ Y G + A+++FD + +V +W A++ G V
Sbjct: 150 ---------------------TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTV 188
Query: 183 QNGLN--DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
+G D L F M + G N ++L+ + + ++L G + HA AI++ S
Sbjct: 189 ISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNS 248
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
+ + +L+ MY K G + A++VF+ I D V W +MI LA + EA+ LF M+
Sbjct: 249 VFLKTSLVDMYFKCGKVGLARRVFDEIV-ERDIVVWGAMIAGLAHNKRQWEALGLFRTMI 307
Query: 301 A-LGIEPDHITYVGVLSACTHVGLVEQGRS-YFNLMASVHKIEPTLSHYACMIDLYGRA- 357
+ I P+ + +L V ++ G+ + +++ S + +E H + +IDLY +
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVH-SGLIDLYCKCG 366
Query: 358 ------------------------------GLLQEAFKFIENMPIE---PDVIAWGSLLS 384
G +A + I M E PDV+ ++L
Sbjct: 367 DMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLP 426
Query: 385 SCKVYKNVDLAK----IAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
C + + K A + L L N ++L +YS CG E ++ + R
Sbjct: 427 VCAELRAIKQGKEIHCYALKNLFL---PNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRN 483
Query: 441 VK 442
VK
Sbjct: 484 VK 485
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 232/496 (46%), Gaps = 77/496 (15%)
Query: 93 QIHSYIIRTEFDISG--AVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGY 150
+I I R + +++G QN+++ Y T VA+ V I D++
Sbjct: 48 EITEMINRYKRNVAGHTLTQNSMVGQYKTTVSPSVAQNVT----IETFDSLCIQ------ 97
Query: 151 AKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
G+ A ++ D L N+ GY A++L R L
Sbjct: 98 ---GNWREAVEVLDYLENK----------GY--------AMDLIR-------------LL 123
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN-LICW 269
+ + + +L + +H I + NA+I MY+ S+D+A KVF + W
Sbjct: 124 GLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEW 183
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
N+ T+ M+ +G GEEAI+LF + G +P+ + V S CT G V++G
Sbjct: 184 NSGTLC--VMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSL 241
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVY 389
F M + I P++ HY + + +G L EA F+E MP+EP V W +L++ +V+
Sbjct: 242 QFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVH 301
Query: 390 KNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSW 449
+V+L AE L+E ++ +++ K D VKKE +
Sbjct: 302 GDVELGDRCAE---LVEKLDATRLDKVSSAGLVATKASDF-----------VKKEPST-- 345
Query: 450 LEIQNEVHI---FGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDT---DSVLHDLEIEV 503
++E + F DS HPQ + IY+ + + ++K++G++PDT S++ + +E
Sbjct: 346 ---RSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLI--MAMEN 400
Query: 504 KDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVT 563
K+++ Y E++A+ ++ + + + ++ N+RI DCH +K +S + GR++I RD
Sbjct: 401 KEQIFGYR-EEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAK 459
Query: 564 RFHHFKDGFCSCRDYW 579
+H FK+G C C + W
Sbjct: 460 IYHLFKNGVCRCNNLW 475
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 175/337 (51%), Gaps = 16/337 (4%)
Query: 245 NALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+ +I MY+ S D+A VFN + N + +W +MI LA++G GE AI++F + + G
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRN-SETWGTMIRCLAKNGEGERAIDMFTRFIEEGN 205
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAF 364
+PD + V AC +G + +G +F M + + ++ Y +I++ G L EA
Sbjct: 206 KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEAL 265
Query: 365 KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACG 424
F+E M +EP V W +L++ C V ++L AE LI+ ++ S +N
Sbjct: 266 DFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAE---LIKKLDASRMSKESNAGLVAA 322
Query: 425 KWEDAA--KIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEE 482
K D+A K+++L + ++ + + +H F A D+ H ++ + +
Sbjct: 323 KASDSAMEKLKELRYCQMIRDDP-------KKRMHEFRAGDTSHLGTVSAFRSLKV---Q 372
Query: 483 IKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDC 542
+ +GF+P T +E E K++ L + S KLA A II++ L +++N+R C D
Sbjct: 373 MLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDG 432
Query: 543 HTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRDYW 579
H K IS + GR +I RD ++H +K+G CSC+DYW
Sbjct: 433 HNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDS 66
S++ +I ++ D AL F +M +R+ TW +MI ++G + A+++F+ +++
Sbjct: 145 SYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEG 204
Query: 67 SLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNA--LISMYAKTGGVE 124
+ KPDK + AC ++ ++N G +H + ++ + ++++ +I M A G ++
Sbjct: 205 N-KPDKEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLD 262
Query: 125 -----VARRVVEQSEISDLDAIAFTALLDGYAKLGD 155
V R VE S + + + + GY +LGD
Sbjct: 263 EALDFVERMTVEPS-VEMWETLMNLCWVQGYLELGD 297
>AT1G47580.1 | Symbols: | lipoyltransferase, putative |
chr1:17484753-17486387 FORWARD
Length = 416
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 86/122 (70%)
Query: 458 IFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAI 517
I G E + + Y + + +E++ G++P+T VLHD++ E K+K L +HSE+LAI
Sbjct: 295 ISGGEKKAIVDRSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAI 354
Query: 518 AFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCSCRD 577
AFGII+TP TT+R+MKNLRIC DCH IK +S + REIIVRD RFHHF+DG CSC D
Sbjct: 355 AFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGD 414
Query: 578 YW 579
YW
Sbjct: 415 YW 416
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 220/502 (43%), Gaps = 38/502 (7%)
Query: 10 IMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELFSSMLQD 65
I+IS+ GR+ A F + E D+ ++ S+I+ + G +EA+ +F M +D
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 66 SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFD---ISGAVQNALISMYAKTGG 122
KP T L+ + +I S + + + D N LI+ +
Sbjct: 238 G-CKPTLITYNVILNVFGKMGTP--WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 123 VEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAWTA 176
+ A +V E+ + + D + + ALLD Y K A ++ + + + +V + +
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 177 MIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR 236
+I Y ++G+ D+A+EL M ++G +P+ FT +LS R + I +
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVF---NLICWNNDTVSWSSMIIALAQHGLGEEAI 293
+I NA I MY G K+F N+ + D V+W++++ Q+G+ E
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 294 ELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDL 353
+F++M G P+ T+ ++SA + G EQ + + M + P LS Y ++
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAA 533
Query: 354 YGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL--LIEPD 408
R G+ +++ K + M +P+ + + SLL + K + L AE + +IEP
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP- 592
Query: 409 NSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQ 468
+ L V S C +A + + +RG + + + + V I+G
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT----LNSMVSIYG-------- 640
Query: 469 KDEIYKMMDKIWEEIKKLGFIP 490
+ ++ + + + +K+ GF P
Sbjct: 641 RRQMVAKANGVLDYMKERGFTP 662
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 169/380 (44%), Gaps = 15/380 (3%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELF 59
+I ++N I ++ N G+ + F +++ DIVTWN+++A + Q+G D E +F
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M + + P++ T + +SA + + ++ ++ + N +++ A+
Sbjct: 478 KEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 120 TGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDI----TPARQIFDSLRNRDVVA 173
G E + +V+ + E + + + +LL YA +I + A +++ + V
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+++ + L +A F + + G P+ TL +M+S+ R + +
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGE 290
S++ N+L+ M++++ ++++ I D +S++++I A ++
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
+A +F +M GI PD ITY + + + E+ M H P + Y +
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSI 775
Query: 351 IDLYGRAGLLQEAFKFIENM 370
+D Y + EA F+E++
Sbjct: 776 VDGYCKLNRKDEAKLFVEDL 795
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/507 (20%), Positives = 211/507 (41%), Gaps = 71/507 (14%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
SI ++N +IS + G +D A+ QM+E+ D+ T+ ++++G+ + G + A+ +F
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M +++ KP+ T NA I MY
Sbjct: 408 EEM-RNAGCKPNICTF-----------------------------------NAFIKMYGN 431
Query: 120 TGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVA---- 173
G ++ ++ + L D + + LL + + G + +F ++ V
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ +I Y + G + A+ ++R M G P+ T +L+ +RG +++ A
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 234 RSREDLSISVGNALITMYAKAGSI----DNAQKVFNLICWNNDTVSWSSMIIALAQHGLG 289
R + +L+ YA I A++V++ + V ++++ ++ L
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI-EPRAVLLKTLVLVCSKCDLL 610
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
EA F ++ G PD T ++S +V + + M P+++ Y
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE-RGFTPSMATYNS 669
Query: 350 MIDLYGRA---GLLQEAFKFIENMPIEPDVIAWGSLL-SSCKVYKNVDLAKIAAE-RLLL 404
++ ++ R+ G +E + I I+PD+I++ +++ + C+ + D ++I +E R
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 405 IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQ--------GSSWLEIQNEV 456
I PD Y+ Y+A +E+A + + M G + Q G L ++E
Sbjct: 730 IVPD-VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Query: 457 HIFGAED----SLHPQKDEIYKMMDKI 479
+F ED H K E +++++I
Sbjct: 789 KLF-VEDLRNLDPHAPKGEDLRLLERI 814
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 159/368 (43%), Gaps = 54/368 (14%)
Query: 136 SDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAWTAMIVGYVQNGLNDDAL 191
S LD ++ K G ++ A +F+ L+ + DV ++T++I + +G +A+
Sbjct: 169 SMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAV 228
Query: 192 ELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMY 251
+F+ M ++G +P T +L+V + + N + ++
Sbjct: 229 NVFKKMEEDGCKPTLITYNVILNVFGKMGT---------------------PWNKITSLV 267
Query: 252 AKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
K S A D +++++I + L +EA ++FE+M A G D +TY
Sbjct: 268 EKMKSDGIAP----------DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY 317
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP 371
+L ++ N M ++ P++ Y +I Y R G+L EA + M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 372 ---IEPDVIAWGSLLSSCKVYKNVDLAKIAAE--RLLLIEPDNSGAYSALANVYSACGKW 426
+PDV + +LLS + V+ A E R +P N ++A +Y GK+
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP-NICTFNAFIKMYGNRGKF 435
Query: 427 EDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKL 486
+ KI +N G+ + +W + + +FG ++ + + +++E+K+
Sbjct: 436 TEMMKIFDEINVCGLSPDI-VTWNTL---LAVFG--------QNGMDSEVSGVFKEMKRA 483
Query: 487 GFIPDTDS 494
GF+P+ ++
Sbjct: 484 GFVPERET 491
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 221/498 (44%), Gaps = 33/498 (6%)
Query: 4 SITSWNIMISLHMNSGRID-----LALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALEL 58
++ S+NI+I GRI L L + + + D++++++++ GY + G + +L
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP-DVISYSTVVNGYCRFGELDKVWKL 746
Query: 59 FSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
M + LKP+ + S + + + ++ S +IR V LI +
Sbjct: 747 IEVM-KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 805
Query: 119 KTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVV 172
K G + A + + D+ D + +TA++ G+ ++GD+ A ++F + + D V
Sbjct: 806 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
+T +I GY + G DA + M + G PN T ++ + L+ ++
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 925
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKV---FNLICWNNDTVSWSSMIIALAQHGLG 289
+ +I N+++ K+G+I+ A K+ F N DTV++++++ A + G
Sbjct: 926 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 985
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSA-CTHVGLVEQGRSYFNLMASVHKIEPTLSHYA 348
++A E+ ++ML G++P +T+ +++ C H G++E G N M + I P + +
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH-GMLEDGEKLLNWMLA-KGIAPNATTFN 1043
Query: 349 CMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSS-CKVYKNVDLAKIAAERLLL 404
++ Y L+ A ++M + PD + +L+ CK A+ E L
Sbjct: 1044 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK-------ARNMKEAWFL 1096
Query: 405 IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDS 464
+ +S + YS K K +K + R V + L E+ F ++
Sbjct: 1097 FQEMKGKGFSVSVSTYSVLIK--GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 1154
Query: 465 LHPQK-DEIYKMMDKIWE 481
++ D I +D+I E
Sbjct: 1155 YKGKRPDTIVDPIDEIIE 1172
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 221/498 (44%), Gaps = 33/498 (6%)
Query: 4 SITSWNIMISLHMNSGRID-----LALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALEL 58
++ S+NI+I GRI L L + + + D++++++++ GY + G + +L
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP-DVISYSTVVNGYCRFGELDKVWKL 746
Query: 59 FSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
M + LKP+ + S + + + ++ S +IR V LI +
Sbjct: 747 IEVM-KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 805
Query: 119 KTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVV 172
K G + A + + D+ D + +TA++ G+ ++GD+ A ++F + + D V
Sbjct: 806 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
+T +I GY + G DA + M + G PN T ++ + L+ ++
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 925
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKV---FNLICWNNDTVSWSSMIIALAQHGLG 289
+ +I N+++ K+G+I+ A K+ F N DTV++++++ A + G
Sbjct: 926 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 985
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSA-CTHVGLVEQGRSYFNLMASVHKIEPTLSHYA 348
++A E+ ++ML G++P +T+ +++ C H G++E G N M + I P + +
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH-GMLEDGEKLLNWMLA-KGIAPNATTFN 1043
Query: 349 CMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSS-CKVYKNVDLAKIAAERLLL 404
++ Y L+ A ++M + PD + +L+ CK A+ E L
Sbjct: 1044 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK-------ARNMKEAWFL 1096
Query: 405 IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDS 464
+ +S + YS K K +K + R V + L E+ F ++
Sbjct: 1097 FQEMKGKGFSVSVSTYSVLIK--GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 1154
Query: 465 LHPQK-DEIYKMMDKIWE 481
++ D I +D+I E
Sbjct: 1155 YKGKRPDTIVDPIDEIIE 1172
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 206/456 (45%), Gaps = 23/456 (5%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERD----IVTWNSMIAGYNQHGFDKEALELFS 60
I ++N +IS + + G ++ A M + + T+N++I G +HG + A E+F+
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
ML+ S L PD T S L ++ +++ S + + ++++S++ ++
Sbjct: 330 EMLR-SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 121 GGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAW 174
G ++ A + + L D + +T L+ GY + G I+ A + + + + DVV +
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
++ G + + +A +LF MT+ P+S+TL ++ + +L + ++
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEE 291
R L + N L+ + K G ID A++++ + +S+S ++ AL G E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 292 AIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMI 351
A ++++M++ I+P + ++ G G S+ M S P Y +I
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS-EGFVPDCISYNTLI 627
Query: 352 DLYGRAGLLQEAFKFIENMPIE-----PDVIAWGSLLSSCKVYKNVDLAKIAAERLLL-- 404
+ R + +AF ++ M E PDV + S+L + A++ +++
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 405 IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
+ PD S Y+ + N + + +A +I M RG
Sbjct: 688 VNPDRS-TYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 156/391 (39%), Gaps = 55/391 (14%)
Query: 103 FDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFT--ALLDGYAKLGDITPAR 160
F +S NALI + G VE+A V ++ S + +T +++ K G +
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255
Query: 161 QIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVS 216
++ + D+V + +I Y GL ++A EL AM +G P +T +++
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 217 SRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF----------NL 266
+ K++ A +RS + +L+ K G + +KVF +L
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 267 ICWNN----------------------------DTVSWSSMIIALAQHGLGEEAIELFEK 298
+C+++ D V ++ +I + G+ A+ L +
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 299 MLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG 358
ML G D +TY +L ++ + FN M + P +ID + + G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE-RALFPDSYTLTILIDGHCKLG 494
Query: 359 LLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKNVDLAK-IAAERL---LLIEPDNSG 411
LQ A + + M I DV+ + +LL ++D AK I A+ + +L P
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI--- 551
Query: 412 AYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
+YS L N + G +A ++ M + +K
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 194/423 (45%), Gaps = 19/423 (4%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
++VT+ ++I G+ + G A +LF M Q ++PD ++ + + +G ++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQ-RGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAK 152
S + + V ++ I +Y K+G + A V ++ + + + +T L+ G +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 153 LGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT 208
G I A ++ + R +V ++++I G+ + G L+ M K G P+
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI- 267
++ S+ + H + + L++ V N+LI + + D A KVF L+
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 268 --CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA-CTHVGLV 324
D ++++++ G EEA+ LF +M +G+EPD + Y ++ A C H+
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK-P 582
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGS 381
G F+LM +KI ++ +I L + +++A KF N+ +EPD++ + +
Sbjct: 583 TIGLQLFDLMQR-NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 382 LLSSCKVYKNVDLAKIAAERLLLIEP--DNSGAYSALANVYSACGKWEDAAKIRKLMNDR 439
++ + +D A+ E LL + P N+ + L +V + A ++ +M ++
Sbjct: 642 MICGYCSLRRLDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700
Query: 440 GVK 442
G K
Sbjct: 701 GSK 703
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 203/460 (44%), Gaps = 25/460 (5%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ ++ I +++ SG + A +++M ++VT+ +I G Q G EA ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
+L+ ++P T +S + N+ G ++ +I+ + + L+ +K
Sbjct: 416 QILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 121 GGVEVARR--VVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAW 174
G + A R V + L+ + F +L+DG+ +L A ++F + DV +
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
T ++ + G ++AL LF M K G P++ ++ + G Q+ R
Sbjct: 535 TTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQR 594
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEE 291
++ I+V N +I + K I++A K FN + D V++++MI +E
Sbjct: 595 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 654
Query: 292 AIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMI 351
A +FE + P+ +T ++ ++ F++MA +P Y C++
Sbjct: 655 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLM 713
Query: 352 DLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSS-CK---VYKNVDLAKIAAERLLL 404
D + ++ ++ +FK E M I P ++++ ++ CK V + ++ A + LL
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 773
Query: 405 IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
PD AY+ L Y G+ +AA + + M GVK +
Sbjct: 774 --PDVV-AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 14/319 (4%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELF 59
++ +N +I R D AL F+ M + D+ T+ +++ G +EAL LF
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M + L+PD + + A +G Q+ + R + AV N +I + K
Sbjct: 555 FRMFK-MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 120 TGGVEVARRVVEQ--SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVA 173
+E A + + D + + ++ GY L + A +IF+ L+ + V
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
T +I +N D A+ +F M ++G +PN+ T ++ S+ + ++
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGE 290
SI + +I K G +D A +F+ D V+++ +I + G
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 291 EAIELFEKMLALGIEPDHI 309
EA L+E ML G++PD +
Sbjct: 794 EAALLYEHMLRNGVKPDDL 812
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 11/235 (4%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELFS 60
I N++I L RI+ A F + E DIVT+N+MI GY EA +F
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
+L+ + P+ TL + +M+ ++ S + + L+ ++K+
Sbjct: 661 -LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 121 GGVEVARRVVEQSEISDLDA--IAFTALLDGYAKLGDITPARQIF----DSLRNRDVVAW 174
+E + ++ E+ + + ++++ ++DG K G + A IF D+ DVVA+
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 779
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIH 229
+I GY + G +A L+ M + G +P+ A+ + ++ G +H
Sbjct: 780 AILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGVWVH 834
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 220/494 (44%), Gaps = 31/494 (6%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ + NI++S + + + AL+ F+ M D T+N +I ++ G +AL+LF+
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 61 SMLQD-SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
SM + + +PD T S + + + + + ++ + NAL+ YA
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 367
Query: 120 TGGVEVARRV---VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVV 172
G A V ++Q+ I D +++T LL+ Y + A+++F +R +VV
Sbjct: 368 HGMSGTALSVLGDIKQNGIIP-DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 426
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
+ A+I Y NG +A+E+FR M ++G +PN ++ +L+ SR + + ++A
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLG 289
+L+ + N+ I Y A ++ A ++ + D+V+++ +I +
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
EAI ++M L I Y VL A + G V + S FN M + EP + Y
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTS 605
Query: 350 MIDLYGRA---GLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE 406
M+ Y + G E F +E IEPD IA +L+ + K + + L+ E
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN--KGGQPSNVFVLMDLMRE 663
Query: 407 PDNSGAYSALANVYSACG---KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNE-VHIFGAE 462
+ + ++SAC +W+ A + ++M+ G + N+ +H+FG
Sbjct: 664 KEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIG-----LTNQMLHLFGKS 718
Query: 463 DSLHPQKDEIYKMM 476
+ YK++
Sbjct: 719 GKVEAMMKLFYKII 732
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 202/468 (43%), Gaps = 45/468 (9%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
+N+MI LH +D A F +M + D T++++I + + G + A+ L ML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+ +++ P + T + ++AC + N ++ + N ++S Y
Sbjct: 206 R-AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 124 EVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR------DVVAWT 175
A E + + + D F ++ +KLG + A +F+S+R + DVV +T
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+++ Y G ++ +F AM EG +PN + A++ GA HG + +A+
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM-----GAYAVHG--MSGTALSV 377
Query: 236 REDLS-------ISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQ 285
D+ + L+ Y ++ A++VF ++ + V+++++I A
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 286 HGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNL-----MASVHKI 340
+G EA+E+F +M GI+P+ V+S CT + + + N+ A I
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPN------VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 341 EPTLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLS-SCKVYKNVDLAK 396
+ Y I Y A L++A ++M ++ D + + L+S SC++ K +
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 397 IAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
E L P YS++ YS G+ +A I M G + +
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 599
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 56/373 (15%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACT----------- 83
++VT+N++I Y +GF EA+E+F M QD +KP+ ++ + L+AC+
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 84 ---------NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV----------- 123
NL I SYI E + + A+ ++ K V
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 124 -----EVARRVVEQSEIS-DLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVA 173
E + E ++S L ++++L Y+K G +T A IF+ ++ DV+A
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 602
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+T+M+ Y + A ELF M G P+S +A++ ++G ++ +
Sbjct: 603 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN---VFVLMD 659
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSS------MIIALAQHG 287
RE G +++ ++ ++ +LI + + S M+ + G
Sbjct: 660 LMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG 719
Query: 288 LGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA--SVHKIEPTLS 345
E ++LF K++A G+ + TY +L H+ V R Y ++ S I+P+
Sbjct: 720 KVEAMMKLFYKIIASGVGINLKTYAILLE---HLLAVGNWRKYIEVLEWMSGAGIQPSNQ 776
Query: 346 HYACMIDLYGRAG 358
Y +I R+
Sbjct: 777 MYRDIISFGERSA 789
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 218/493 (44%), Gaps = 29/493 (5%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ + NI++S + + + AL+ F+ M D T+N +I ++ G +AL+LF+
Sbjct: 116 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 61 SMLQD-SSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
SM + + +PD T S + + + + + ++ + NAL+ YA
Sbjct: 176 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 235
Query: 120 TGGVEVARRV---VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVV 172
G A V ++Q+ I D +++T LL+ Y + A+++F +R +VV
Sbjct: 236 HGMSGTALSVLGDIKQNGIIP-DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 294
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
+ A+I Y NG +A+E+FR M ++G +PN ++ +L+ SR + + ++A
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLG 289
+L+ + N+ I Y A ++ A ++ + D+V+++ +I +
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
EAI ++M L I Y VL A + G V + S FN M + EP + Y
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTS 473
Query: 350 MIDLYGRA---GLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE 406
M+ Y + G E F +E IEPD IA +L+ + K + + L+ E
Sbjct: 474 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN--KGGQPSNVFVLMDLMRE 531
Query: 407 PDNSGAYSALANVYSACG---KWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAED 463
+ + ++SAC +W+ A + ++M+ G + +H+FG
Sbjct: 532 KEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT----NQMLHLFGKSG 587
Query: 464 SLHPQKDEIYKMM 476
+ YK++
Sbjct: 588 KVEAMMKLFYKII 600
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 202/468 (43%), Gaps = 45/468 (9%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
+N+MI LH +D A F +M + D T++++I + + G + A+ L ML
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+ +++ P + T + ++AC + N ++ + N ++S Y
Sbjct: 74 R-AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 124 EVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR------DVVAWT 175
A E + + + D F ++ +KLG + A +F+S+R + DVV +T
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+++ Y G ++ +F AM EG +PN + A++ GA HG + +A+
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM-----GAYAVHG--MSGTALSV 245
Query: 236 REDLS-------ISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQ 285
D+ + L+ Y ++ A++VF ++ + V+++++I A
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 305
Query: 286 HGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNL-----MASVHKI 340
+G EA+E+F +M GI+P+ V+S CT + + + N+ A I
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPN------VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 341 EPTLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLS-SCKVYKNVDLAK 396
+ Y I Y A L++A ++M ++ D + + L+S SC++ K +
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 397 IAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
E L P YS++ YS G+ +A I M G + +
Sbjct: 420 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 56/373 (15%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACT----------- 83
++VT+N++I Y +GF EA+E+F M QD +KP+ ++ + L+AC+
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 84 ---------NLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV----------- 123
NL I SYI E + + A+ ++ K V
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 124 -----EVARRVVEQSEIS-DLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVA 173
E + E ++S L ++++L Y+K G +T A IF+ ++ DV+A
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 470
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+T+M+ Y + A ELF M G P+S +A++ ++G ++ +
Sbjct: 471 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN---VFVLMD 527
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSS------MIIALAQHG 287
RE G +++ ++ ++ +LI + + S M+ + G
Sbjct: 528 LMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG 587
Query: 288 LGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMA--SVHKIEPTLS 345
E ++LF K++A G+ + TY +L H+ V R Y ++ S I+P+
Sbjct: 588 KVEAMMKLFYKIIASGVGINLKTYAILLE---HLLAVGNWRKYIEVLEWMSGAGIQPSNQ 644
Query: 346 HYACMIDLYGRAG 358
Y +I R+
Sbjct: 645 MYRDIISFGERSA 657
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 200/439 (45%), Gaps = 36/439 (8%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELF 59
++ +++ +IS + SG + A++ F M E ++VT+N++I + G + + + F
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+Q + ++PD+ T S L+ C+ + + + + N L+ K
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 120 TGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVA 173
G +++A ++ Q + + + ++++ ++DG+AK G A +F +R D V+
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ ++ Y + G +++AL++ R M G + + T A+L + + K++
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLI---CWNNDTVSWSSMIIALAQHGLGE 290
R ++ + LI Y+K G A ++F D V +S++I AL ++GL
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFN----LMASVHKIEPTLSH 346
A+ L ++M GI P+ +TY ++ A +++ Y N +S T +
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE 626
Query: 347 YACMIDLYGR--------------AGLLQ-----EAFKFIENMPIEPDVIAWGSLLSSCK 387
+I L+G+ G+ + E F+ + + I+P+V+ + ++L++C
Sbjct: 627 GNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Query: 388 VYKNVDLAKIAAERLLLIE 406
+ + A + E L L +
Sbjct: 687 RCNSFEDASMLLEELRLFD 705
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 14/290 (4%)
Query: 107 GAVQNALISMYAKTGGVEVARRVVEQSEISDLD--AIAFTALLDGYAKLGDITPARQIFD 164
G + +A+IS + G V +A+R+ E + AF+AL+ Y + G A +F+
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292
Query: 165 SLR----NRDVVAWTAMIVGYVQNGLN-DDALELFRAMTKEGPRPNSFTLAAMLSVSSRG 219
S++ ++V + A+I + G+ + F M + G +P+ T ++L+V SRG
Sbjct: 293 SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 220 ASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSW 276
+ + R + + N L+ K G +D A ++ + + VS+
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 277 SSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMAS 336
S++I A+ G +EA+ LF +M LGI D ++Y +LS T VG E+ MAS
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 337 VHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE---PDVIAWGSLL 383
V I+ + Y ++ YG+ G E K M E P+++ + +L+
Sbjct: 473 V-GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 125/244 (51%), Gaps = 11/244 (4%)
Query: 210 AAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI-- 267
+AM+S R + K+I +A ++ +ALI+ Y ++G + A VFN +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 268 -CWNNDTVSWSSMIIALAQHGLG-EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
+ V+++++I A + G+ ++ + F++M G++PD IT+ +L+ C+ GL E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE---PDVIAWGSL 382
R+ F+ M + +IE + Y ++D + G + AF+ + MP++ P+V+++ ++
Sbjct: 357 AARNLFDEMTN-RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 383 LSSCKVYKNVD--LAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
+ D L R L I D +Y+ L ++Y+ G+ E+A I + M G
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRV-SYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 441 VKKE 444
+KK+
Sbjct: 475 IKKD 478
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 145/323 (44%), Gaps = 56/323 (17%)
Query: 137 DLDAIAFTALLDGYAKLGDITPARQIFDSL----RNRDVVAWTAMIVGYVQNGLNDDALE 192
+ I F L+ Y KLG+ A ++ L +V+++TA++ Y + G ++A
Sbjct: 136 NFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA 195
Query: 193 LFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI---RSREDLSISVGNALIT 249
+FR M GP P++ T +L G +++ + + +S + + +I
Sbjct: 196 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY 255
Query: 250 MYAKAGSIDNAQKVF----------NLICWNN-------------------------DTV 274
MY KAG+ + A+KVF + + +N+ D V
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVV 315
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
S++ +I A + EEA+ +FE+ML G+ P H Y +L A G+VEQ ++ F M
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPI---EPDVIAWGSLLSS------ 385
+I P L Y M+ Y A ++ A KF + + + EP+++ +G+L+
Sbjct: 376 RR-DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 386 ----CKVYKNVDLAKIAAERLLL 404
+VY+ + L+ I A + +L
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTIL 457
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 145/323 (44%), Gaps = 56/323 (17%)
Query: 137 DLDAIAFTALLDGYAKLGDITPARQIFDSL----RNRDVVAWTAMIVGYVQNGLNDDALE 192
+ I F L+ Y KLG+ A ++ L +V+++TA++ Y + G ++A
Sbjct: 143 NFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA 202
Query: 193 LFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI---RSREDLSISVGNALIT 249
+FR M GP P++ T +L G +++ + + +S + + +I
Sbjct: 203 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY 262
Query: 250 MYAKAGSIDNAQKVF----------NLICWNN-------------------------DTV 274
MY KAG+ + A+KVF + + +N+ D V
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVV 322
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
S++ +I A + EEA+ +FE+ML G+ P H Y +L A G+VEQ ++ F M
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPI---EPDVIAWGSLLSS------ 385
+I P L Y M+ Y A ++ A KF + + + EP+++ +G+L+
Sbjct: 383 RR-DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 441
Query: 386 ----CKVYKNVDLAKIAAERLLL 404
+VY+ + L+ I A + +L
Sbjct: 442 VEKMMEVYEKMRLSGIKANQTIL 464
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 218/494 (44%), Gaps = 57/494 (11%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSERDIV----TWNSMIAGYNQHGFDKEALELFSSM 62
++N MI + SG+I A F++M E IV T+N+MI Y +G E L +M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 63 ---------------------------------LQDSSLKPDKFTLASTLSACTNLENMN 89
++D LKPD + + L A + +
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 90 LGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEIS-DLDAIAFTALLD 148
+ + + + +I Q+AL MY + +E + ++ ++ ++ + ++A +D
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 149 GYAKLGDITPARQIF---DSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPN 205
Y + G ++ A ++F + R V+ + MI Y + + A ELF +M G P+
Sbjct: 480 AYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPD 539
Query: 206 SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGN-ALITMYAKAGSIDNAQKVF 264
T ++ + + A + H + + +R +S + A+I+ + K G ++ A++V+
Sbjct: 540 KCTYNTLVQILA-SADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 265 NLICWNN---DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHV 321
+ N D V + +I A A G ++A+ E M GI + + Y ++ T V
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 322 GLVEQGRS-YFNLMASVHKIE-PTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAW 379
G +++ + Y L+ S +K + P + CMI+LY ++++A ++M + +
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF 718
Query: 380 GSLLSSCKVYKN------VDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIR 433
+ C KN +AK E +L +P +Y+++ +++ G++++A +
Sbjct: 719 TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPL---SYNSVLGLFALDGRFKEAVETF 775
Query: 434 KLMNDRGVKKEQGS 447
K M G++ + +
Sbjct: 776 KEMVSSGIQPDDST 789
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 151/310 (48%), Gaps = 14/310 (4%)
Query: 29 QQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENM 88
Q++++R ++ +N MI Y ++A ELF SM+ + PDK T + + + +
Sbjct: 498 QEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMS-YGVTPDKCTYNTLVQILASADMP 556
Query: 89 NLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL--DAIAFTAL 146
+ G+ + T + A+IS + K G + +A V ++ ++ D + + L
Sbjct: 557 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 147 LDGYAKLGDITPARQIFDSLRNRDV----VAWTAMIVGYVQNGLNDDALELFRAMTKEGP 202
++ +A G++ A ++++ + V + ++I Y + G D+A ++R + +
Sbjct: 617 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 203 R---PNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDN 259
+ P+ +T M+++ S + + + I S ++ R + + ++ MY K G +
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDS-MKQRGEANEFTFAMMLCMYKKNGRFEE 735
Query: 260 AQKV---FNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLS 316
A ++ + D +S++S++ A G +EA+E F++M++ GI+PD T+ + +
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGT 795
Query: 317 ACTHVGLVEQ 326
+G+ ++
Sbjct: 796 ILMKLGMSKK 805
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 224/513 (43%), Gaps = 39/513 (7%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELF 59
++ + +IMI+ ++ LA + ++ E D VT++++I G G EALEL
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 60 SSMLQDSSLKPDKFTLASTLSA-CTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
M++ KP TL + ++ C N ++ + ++ T F + ++ +
Sbjct: 166 DRMVEMGH-KPTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 119 KTGGVEVAR---RVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DV 171
K+G +A R +E+ +I LDA+ ++ ++DG K G + A +F+ + + D+
Sbjct: 224 KSGQTALAMELLRKMEERKIK-LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 172 VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS 231
+ +T +I G+ G DD +L R M K P+ +A++ + L +++H
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 232 AIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI----CWNNDTVSWSSMIIALAQHG 287
I+ +LI + K +D A + +L+ C N +++ +I +
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN-IRTFNILINGYCKAN 401
Query: 288 LGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHY 347
L ++ +ELF KM G+ D +TY ++ +G +E + F M S ++ P + Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS-RRVRPDIVSY 460
Query: 348 ACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSSCKVYKNVDLA--KIAAERL 402
++D G ++A F+ IE +E D+ + ++ VD A + L
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 403 LLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAE 462
++PD Y+ + G +A + + M + G G ++ I H+ G
Sbjct: 521 KGVKPDVK-TYNIMIGGLCKKGSLSEADLLFRKMEEDG-HSPNGCTY-NILIRAHL-GEG 576
Query: 463 DSLHPQKDEIYKMMDKIWEEIKKLGFIPDTDSV 495
D+ K+ EEIK+ GF D +V
Sbjct: 577 DATKSA---------KLIEEIKRCGFSVDASTV 600
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 170/406 (41%), Gaps = 46/406 (11%)
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGAS----LNHGKQIHASAI-RSREDLSIS 242
DDA++LF+ MT+ PRP + + SV +R L+ KQ+ I + LSI
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
+ N + + K+ L + DTV++S++I L G EA+EL ++M+ +
Sbjct: 114 I-NCCCRCRKLSLAFSAMGKIIKL-GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG---L 359
G +P IT +++ G V + M +P Y ++ + ++G L
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTAL 230
Query: 360 LQEAFKFIENMPIEPDVIAW----------GSLLSSCKVYKNVDLAKIAAERLLLIEPDN 409
E + +E I+ D + + GSL ++ ++ +++ A+ ++
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII------ 284
Query: 410 SGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQK 469
Y+ L + G+W+D AK+ + M +K++ + + F E L +
Sbjct: 285 ---YTTLIRGFCYAGRWDDGAKLLRDM----IKRKITPDVVAFSALIDCFVKEGKLR-EA 336
Query: 470 DEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTT 529
+E++K E+ + G PDT + ++ K+ L + L + P T
Sbjct: 337 EELHK-------EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 530 LRIMKNLRIC--NDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFC 573
I+ N C N ++ K+ R ++ VT ++ GFC
Sbjct: 390 FNILIN-GYCKANLIDDGLELFRKMSLRGVVADTVT-YNTLIQGFC 433
>AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11394744-11395973 REVERSE
Length = 409
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 135/309 (43%), Gaps = 41/309 (13%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
+IT N ++ +H++ GR+D+ F +M RD +W + G + G ++A LF SML
Sbjct: 122 TITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSML 181
Query: 64 ---QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
Q + K + L L AC + + LGKQ+H+ + F
Sbjct: 182 KHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGF----------------- 224
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
I + D+ +L+ Y + + A + L N + VAW A +
Sbjct: 225 --------------IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTN 270
Query: 181 YVQNGLNDDALELFRAMTKEGPRPN----SFTLAAMLSVSSRGASLNHGKQIHASAIRSR 236
+ G + + F M G + N S L A VS G S G+Q+HA+AI+
Sbjct: 271 DYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS---GQQVHANAIKLG 327
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELF 296
+ + LI MY K G + +A+KVF W++M+ + Q+G+ EAI+L
Sbjct: 328 FESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLL 387
Query: 297 EKMLALGIE 305
+M A GI+
Sbjct: 388 YQMKATGIK 396
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 15/250 (6%)
Query: 146 LLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRP- 204
LL + G + RQ+FD + +RD +W + +G ++ G +DA LF +M K +
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 205 ---NSFTLAAMLSVSSRGASLNHGKQIHASAIR----SREDLSISVGNALITMYAKAGSI 257
S+ L +L + GKQ+HA + ED +S +LI Y + +
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLS--GSLIRFYGEFRCL 246
Query: 258 DNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
++A V + + N +TV+W++ + + G +E I F +M GI+ + + VL A
Sbjct: 247 EDANLVLHQLS-NANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKA 305
Query: 318 CTHVGLVEQGRSYFNLMASVHKI--EPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPD 375
C+ V + GRS + A+ K+ E +I++YG+ G +++A K ++ E
Sbjct: 306 CSWVS--DGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETS 363
Query: 376 VIAWGSLLSS 385
V W ++++S
Sbjct: 364 VSCWNAMVAS 373
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 170/373 (45%), Gaps = 52/373 (13%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D++T+N MI+GY + G AL + M S+ PD T
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVT-------------------- 206
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLG 154
++ I+R+ D SG ++ A+ EV R++++ D+ I +T L++ +
Sbjct: 207 YNTILRSLCD-SGKLKQAM----------EVLDRMLQRDCYPDV--ITYTILIEATCRDS 253
Query: 155 DITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
+ A ++ D +R+R DVV + ++ G + G D+A++ M G +PN T
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 211 AML-SVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAG----SIDNAQKVFN 265
+L S+ S G ++ +++ A +R S+ N LI + G +ID +K+
Sbjct: 314 IILRSMCSTGRWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 266 LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
C N ++S++ ++ + + AIE E+M++ G PD +TY +L+A G VE
Sbjct: 373 HGCQPN-SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSL 382
N ++S P L Y +ID +AG +A K ++ M ++PD I + SL
Sbjct: 432 DAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 383 LSSCKVYKNVDLA 395
+ VD A
Sbjct: 491 VGGLSREGKVDEA 503
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 155/343 (45%), Gaps = 21/343 (6%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS-ERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
+ ++N+MIS + +G I+ AL+ +MS D+VT+N+++ G K+A+E+ ML
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQ-----NALISMYA 118
Q PD T + A + +G H+ + E G N L++
Sbjct: 232 QRDCY-PDVITYTILIEA--TCRDSGVG---HAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 119 KTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIF-DSLR---NRDVV 172
K G ++ A + + S + I +L G A ++ D LR + VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASA 232
+ +I + GL A+++ M + G +PNS + +L + ++ +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDT---VSWSSMIIALAQHGLG 289
+ I N ++T K G +++A ++ N + + ++++++I LA+ G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFN 332
+AI+L ++M A ++PD ITY ++ + G V++ +F+
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 140/341 (41%), Gaps = 50/341 (14%)
Query: 112 ALISMYAKTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLR-N 168
LI + + G A +++E E S D I + ++ GY K G+I A + D + +
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS 201
Query: 169 RDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQI 228
DVV + ++ +G A+E+ M + P+ T ++ + R + + H ++
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 229 HASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGL 288
+R R D V+++ ++ + + G
Sbjct: 262 -LDEMRDRG-------------------------------CTPDVVTYNVLVNGICKEGR 289
Query: 289 GEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR--SYFNLMASVHK--IEPTL 344
+EAI+ M + G +P+ IT+ +L + + GR L+A + + P++
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRS-----MCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 345 SHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKNVDLAKIAAER 401
+ +I+ R GLL A +E MP +P+ +++ LL K +D A ER
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 402 LLL--IEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
++ PD Y+ + GK EDA +I ++ +G
Sbjct: 405 MVSRGCYPDIV-TYNTMLTALCKDGKVEDAVEILNQLSSKG 444
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 204/466 (43%), Gaps = 38/466 (8%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDI----VTWNSMIAGYNQHGFDKEALELF 59
++ ++N M+ +G ++ + +M R+I VT+N +I G++++G +EA
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M + S ++ + + + ++ + + N I
Sbjct: 297 GDM-RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VAWT 175
G ++ AR ++ S ++ D +++ L+ GY K+G A +FD LR D+ V +
Sbjct: 356 FGRIDDARELL--SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+I G ++G + A L MT + P+ T ++ + +L+ +++ +R
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 236 --REDLSISVGNALITMYAKAGSIDNAQKVFNL----ICWNN---DTVSWSSMIIALAQH 286
+ D G A T + ++ K F L + ++ D ++ I L +
Sbjct: 474 GIKPD-----GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 287 GLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSH 346
G +AIE K+ +G+ PDH+TY V+ G + R+ ++ M ++ P++
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR-KRLYPSVIT 587
Query: 347 YACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKNVD-----LAKIA 398
Y +I + +AG L++AF++ M + P+V+ +LL N+D L K+
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 399 AERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
E + P N +Y+ L + KWE+ K+ K M D+ ++ +
Sbjct: 648 EEGI----PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 148/356 (41%), Gaps = 52/356 (14%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
+ +++NI I + GRID A M+ D+V++N+++ GY + G EA LF L
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD-L 400
Query: 64 QDSSLKPDKFT---LASTLSACTNLENMNLGKQ------IHSYIIRTEFDISGAVQNALI 114
+ + P T L L NLE K+ I +I + G V+N +
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 115 SM-----------------YAKT---------GGVEVARRVVEQSEISD---LDAIAFTA 145
SM YA T G + A R+ E+ +D D +
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 146 LLDGYAKLGDITPA----RQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEG 201
+DG K+G++ A R+IF D V +T +I GY++NG A L+ M ++
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 202 PRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQ 261
P+ T ++ ++ L Q + ++ NAL+ KAG+ID A
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA- 639
Query: 262 KVFNLICWNND------TVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
+ +C + S++ +I EE ++L+++ML IEPD T+
Sbjct: 640 --YRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 186/406 (45%), Gaps = 32/406 (7%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
++ ++NI+I +G ID+AL F +M + ++VT+N++I GY + + +L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
SM L+P+ + ++ M + + + R + + N LI Y K
Sbjct: 264 RSMAL-KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 120 TGGVEVARRVVEQSEIS----DLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV--- 172
G A +V +E+ I +T+L+ K G++ A + D +R R +
Sbjct: 323 EGNFHQA--LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 173 -AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS 231
+T ++ G+ Q G ++A + R M G P+ T A+++ G + GK A
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN----GHCVT-GKMEDAI 435
Query: 232 AI---RSREDLSISV--GNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIAL 283
A+ + LS V + +++ + ++ +D A +V + DT+++SS+I
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 284 AQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPT 343
+ +EA +L+E+ML +G+ PD TY +++A G +E+ N M + P
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPD 554
Query: 344 LSHYACMIDLYGRAGLLQEAFKFIENMPIE---PDVIAWGSLLSSC 386
+ Y+ +I+ + +EA + + + E P + + +L+ +C
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 174/396 (43%), Gaps = 32/396 (8%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
++ S+N++I+ GR+ +M+ R D VT+N++I GY + G +AL +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+ ML+ L P T S + + NMN + + + L+ +++
Sbjct: 334 AEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 120 TGGVEVARRVVEQSEISDLD--AIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVA 173
G + A RV+ + + + + AL++G+ G + A + + ++ + DVV+
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
++ ++ G+ ++ D+AL + R M ++G +P++ T ++++ ++ +
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGE 290
R ALI Y G ++ A ++ N + D V++S +I L +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHV---------------GLVEQGRSYF-NLM 334
EA L K+ P +TY ++ C+++ G++ + F +++
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
HK P + Y MI + RAG +++A+ + M
Sbjct: 633 GKNHK--PDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 26/279 (9%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELFS 60
+ S++ ++S S +D AL ++M E+ D +T++S+I G+ + KEA +L+
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
ML+ L PD+FT + ++A ++ Q+H+ ++ + LI+ K
Sbjct: 510 EMLR-VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 121 GGVEVARRVV-----EQSEISD------------LDAIAFTALLDGYAKLGDITPARQIF 163
A+R++ E+S SD ++ + +L+ G+ G +T A Q+F
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 164 DSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRG 219
+S+ + D A+ MI G+ + G A L++ M K G ++ T+ A++ +
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688
Query: 220 ASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
+N + +RS E L+ + + G++D
Sbjct: 689 GKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMD 727
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 98/501 (19%), Positives = 208/501 (41%), Gaps = 84/501 (16%)
Query: 106 SGAVQNALISMYAKTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLG-DITPARQI 162
+ +V + ++ Y++ ++ A +V ++ +++ A+LD + +I+ A +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 163 F----DSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR 218
F +S + +V + +I G+ G D AL LF M +G PN T ++ +
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 219 GASLNHG-KQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF---NLICWNNDTV 274
++ G K + + A++ E IS N +I + G + V N ++ D V
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISY-NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
+++++I + G +A+ + +ML G+ P ITY ++ + G + + + + M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKN 391
V + P Y ++D + + G + EA++ + M P V+
Sbjct: 372 -RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT------------- 417
Query: 392 VDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLE 451
Y+AL N + GK EDA + + M ++G+ + S
Sbjct: 418 ---------------------YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 452 IQNEVHIFGAEDSLHPQKDEIYKMMDK-----------------------IWEEIKKLGF 488
+ + +++L +++ + K + ++EE+ ++G
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 489 IPD--TDSVL---HDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLRIMKN-LRICNDC 542
PD T + L + +E ++ +K L+ H+E + G++ P+ T ++ N L +
Sbjct: 517 PPDEFTYTALINAYCMEGDL-EKALQLHNE--MVEKGVL--PDVVTYSVLINGLNKQSRT 571
Query: 543 HTAIKFISKLMGREIIVRDVT 563
A + + KL E + DVT
Sbjct: 572 REAKRLLLKLFYEESVPSDVT 592
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 167/361 (46%), Gaps = 14/361 (3%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
S+NI+I+ R +AL+ +M E D+VT +S+I G+ Q +A++L S M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ +PD + + + +N ++ + R N+L++ +G
Sbjct: 166 -EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 123 VEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTA 176
A R++ + D+ + I FTA++D + K G + A ++++ + R DV + +
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 177 MIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHG-KQIHASAIRS 235
+I G +G D+A ++ M +G P+ T +++ + ++ G K A R
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIEL 295
+I+ N +I Y +AG D AQ++F+ + + ++S ++ L + E+A+ L
Sbjct: 345 LVGDTITY-NTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVL 403
Query: 296 FEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYG 355
FE M IE D TY V+ +G VE F + S ++P + Y MI +
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVSYTTMISGFC 462
Query: 356 R 356
R
Sbjct: 463 R 463
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 47/212 (22%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALE 57
L + ++N +I+ S R+D F++M++R D +T+N++I GY Q G A E
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 58 LFSSMLQDSSLKPDKFTLASTLSA-CTNLENMNLGKQIHSYIIRTEFDISGAVQNALISM 116
+FS M DS +P+ T + L C N V+ AL+
Sbjct: 371 IFSRM--DS--RPNIRTYSILLYGLCMNWR----------------------VEKALVLF 404
Query: 117 YAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVV 172
+++SEI +LD + ++ G K+G++ A +F SL + DVV
Sbjct: 405 EN-----------MQKSEI-ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 173 AWTAMIVGYVQNGLNDDALELFRAMTKEGPRP 204
++T MI G+ + D + L+R M ++G P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 136/293 (46%), Gaps = 32/293 (10%)
Query: 214 SVSSRGASLNHGKQI--HASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN--LICW 269
+ S++ +S+N ++I I+SR SI + +++ AK+ + D +F+ +C
Sbjct: 40 TFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG 99
Query: 270 -NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGR 328
+D S++ +I L + A+ + KM+ G EPD +T +++ QG
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC------QGN 153
Query: 329 SYFNLMASVHKIE-----PTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWG 380
F+ + V K+E P + Y +ID + GL+ +A + + M + D + +
Sbjct: 154 RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213
Query: 381 SLLSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDR 439
SL++ C + D A++ + ++ N ++A+ +V+ GK+ +A K+ + M R
Sbjct: 214 SLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
Query: 440 GVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDT 492
V + ++ + N + +H + DE +M+D + + G +PD
Sbjct: 274 CVDPDV-FTYNSLINGL-------CMHGRVDEAKQMLDLMVTK----GCLPDV 314
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 176/380 (46%), Gaps = 50/380 (13%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELF 59
++ ++ ++++ G IDLA +M E ++V ++++I ++ + +AL LF
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+ M ++ ++P+ T +S +S N E + ++ S +I + + + NALI + K
Sbjct: 284 TEM-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 120 TGGVEVARRVVEQ--SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRD----VVA 173
G + A ++ ++ D D +++L++G+ + A+ +F+ + ++D VV
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ +I G+ + D+ +ELFR M++ G N+ T ++ HG
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI----------HG-------- 444
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGE 290
+ +A DNAQ VF + + + +++++++ L ++G E
Sbjct: 445 -----------------FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
+A+ +FE + +EP TY ++ G VE G F + S+ ++P + Y M
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIIYNTM 546
Query: 351 IDLYGRAGLLQEAFKFIENM 370
I + R GL +EA M
Sbjct: 547 ISGFCRKGLKEEADALFRKM 566
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 198/457 (43%), Gaps = 52/457 (11%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELF 59
++ ++NI+I+ +I LALA +M E IVT +S++ GY +A+ L
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M++ +PD T + IH + +
Sbjct: 179 DQMVE-MGYRPDTITFTTL---------------IHGLFLHNK----------------A 206
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAWT 175
+ V + R+V++ +L + + +++G K GDI A + + + +VV ++
Sbjct: 207 SEAVALVDRMVQRGCQPNL--VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+I + DDAL LF M +G RPN T ++++S + ++ + I
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFNLI---CWNNDTVSWSSMIIALAQHGLGEEA 292
+ + ++ NALI + K G + A+K+++ + + D ++SS+I H +EA
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMID 352
+FE M++ P+ +TY +++ +++G F M+ + T++ Y +I
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT-YTTLIH 443
Query: 353 LYGRA---GLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEP 407
+ +A Q FK + + + P+++ + +LL ++ A + E L +EP
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 408 DNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
Y+ + GK ED + ++ +GVK +
Sbjct: 504 -TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERD----IVTWNSMIAGYNQHGFDKEALELFS 60
I +++ +I+ R+D A F+ M +D +VT+N++I G+ + E +ELF
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M Q L + T + + + + + + ++ + N L+ K
Sbjct: 425 EMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 121 GGVEVARRVVEQSEISDLDAIAFT--ALLDGYAKLGDITPARQIFDSLRNR----DVVAW 174
G +E A V E + S ++ +T +++G K G + +F SL + DV+ +
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT 208
MI G+ + GL ++A LFR M ++GP P+S T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 134/311 (43%), Gaps = 51/311 (16%)
Query: 182 VQNGLN----DDALELFRAMTKEGPRPNSFTLAAMLSVSSR-----------------GA 220
++NGL+ DDA+ LF M K P P+ F +LS ++ G
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 221 SLN-HGKQIHASAIRSREDLSISVGNALITMYAKAG---SIDNAQKVFNLIC-------- 268
S N + I + R +S+++ AL+ K G SI + N C
Sbjct: 117 SHNLYTYNILINCFCRRSQISLAL--ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 269 -----------WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
+ DT++++++I L H EA+ L ++M+ G +P+ +TY V++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 318 CTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEP 374
G ++ + N M + KIE + Y+ +ID + +A F +EN + P
Sbjct: 235 LCKRGDIDLAFNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 375 DVIAWGSLLSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIR 433
+VI + SL+S C + D +++ ++ + N ++AL + + GK +A K+
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 434 KLMNDRGVKKE 444
M R + +
Sbjct: 354 DEMIKRSIDPD 364
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 200/495 (40%), Gaps = 98/495 (19%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALEL 58
R +++N +I L+ +GR++ A F +M + D VT+N+MI HG EA L
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 59 FSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRT----------------- 101
M ++ + PD T LS + ++ + + I +
Sbjct: 363 LKKM-EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 102 --------EFDISGAVQNAL----------ISMYAKTGGVEVARRVVEQSEISD-LDAIA 142
E I+ +N++ + MY G V A+ + E+ ++ L +
Sbjct: 422 QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT 481
Query: 143 FTALLDGYAKLGDITPARQIFDSLRN-----RDVVAWTAMIVGYVQNGLNDDALELFRAM 197
A++D YA+ G A +F RN DV+ + MI Y + L++ AL LF+ M
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 198 TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
+G P+ T N+L M A +
Sbjct: 542 KNQGTWPDECTY-----------------------------------NSLFQMLAGVDLV 566
Query: 258 DNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
D AQ++ + ++++MI + + GL +A++L+E M G++P+ + Y +
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIE- 373
++ G+VE+ YF +M H ++ +I Y + G L+EA + + M
Sbjct: 627 INGFAESGMVEEAIQYFRMMEE-HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Query: 374 --PDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPDNSG-----AYSALANVYSACGKW 426
PDV A S+LS C DL ++ + G +++ + +Y G
Sbjct: 686 GGPDVAASNSMLSLC-----ADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGML 740
Query: 427 EDAAKIRKLMNDRGV 441
++A ++ + M + G+
Sbjct: 741 DEAIEVAEEMRESGL 755
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 185/422 (43%), Gaps = 50/422 (11%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D++ +N MI Y + ++AL LF M ++ PD+ CT
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGM-KNQGTWPDE---------CT----------- 552
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLD--AIAFTALLDGYAK 152
N+L M A V+ A+R++ + S + A++ Y +
Sbjct: 553 ---------------YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 153 LGDITPARQIFDSLRNRDV----VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT 208
LG ++ A +++++ V V + ++I G+ ++G+ ++A++ FR M + G + N
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC 268
L +++ S+ L ++++ S ++ N+++++ A G + A+ +FN +
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR 717
Query: 269 WNN--DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ 326
D +S+++M+ G+ +EAIE+ E+M G+ D ++ V++ G + +
Sbjct: 718 EKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
F+ M K+ + + L + G+ EA ++ E +A ++ ++
Sbjct: 778 CCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITAT- 836
Query: 387 KVYKNVDLAKIAAERLLLIE----PDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
++ + L A E + P AY+A+ YSA G + A K M ++G++
Sbjct: 837 -LFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Query: 443 KE 444
+
Sbjct: 896 PD 897
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 174/375 (46%), Gaps = 24/375 (6%)
Query: 38 TWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSY 97
T+ +MIA Y + G +A++L+ +M + + +KP++ S ++ E+ + + I +
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAM-EKTGVKPNEVVYGSLINGFA--ESGMVEEAIQYF 643
Query: 98 IIRTEFDISG--AVQNALISMYAKTGGVEVARRVVEQSEISD--LDAIAFTALLDGYAKL 153
+ E + V +LI Y+K G +E ARRV ++ + S+ D A ++L A L
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADL 703
Query: 154 GDITPARQIFDSLRNR---DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
G ++ A IF++LR + DV+++ M+ Y G+ D+A+E+ M + G + +
Sbjct: 704 GIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFN 763
Query: 211 AMLSVSSRGASLNHGKQI-HASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW 269
+++ + L+ ++ H + + L L T+ K G A V L
Sbjct: 764 QVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA--VSQLQTA 821
Query: 270 NNDTVSWSSMIIA---LAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ 326
N+ ++ I + GL A+E +++ + I +H Y V+ + G ++
Sbjct: 822 YNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDM 881
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSC 386
+ M +EP + A ++ +YG+AG++ E K + + + +G L S
Sbjct: 882 ALKAYMRMQE-KGLEPDIVTQAYLVGIYGKAGMV-EGVKRVHSR------LTFGELEPSQ 933
Query: 387 KVYKNVDLAKIAAER 401
++K V A ++A R
Sbjct: 934 SLFKAVRDAYVSANR 948
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEA 292
R+ S N LI +Y KAG +++A +F+ + + DTV++++MI HG EA
Sbjct: 300 RKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEA 359
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMID 352
L +KM GI PD TY +LS G +E Y+ + V T++H A +
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 353 LYGRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDL---AKIAAERLLLIEPDN 409
L R ++ E I M I S+ ++Y N L AK ER L +
Sbjct: 420 LCQRK-MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS 478
Query: 410 SGAYSALANVYSACGKWEDAAKI 432
S +A+ +VY+ G W +A +
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETV 501
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 198/453 (43%), Gaps = 56/453 (12%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+++I I+ ++ LALA +M E DIVT +S++ GY +A+ L M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
++ KPD FT + IH + + S AV AL+ + G
Sbjct: 180 VE-MGYKPDTFTFTTL---------------IHGLFLHNK--ASEAV--ALVDQMVQRG- 218
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN----RDVVAWTAMI 178
D + + +++G K GDI A + + DVV + +I
Sbjct: 219 -------------CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRED 238
G + DDAL LF M +G RP+ FT ++++S + ++ + I + +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 239 LSISVGNALITMYAKAGSIDNAQKVFNLI---CWNNDTVSWSSMIIALAQHGLGEEAIEL 295
++ +ALI + K G + A+K+++ + + D ++SS+I H +EA +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 296 FEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYG 355
FE M++ P+ +TY ++ VE+G F M+ + T++ Y +I +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YTTLIHGFF 444
Query: 356 RA---GLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAK--IAAERLL--LIEPD 408
+A Q FK + ++ + P+++ + LL + KN LAK + E L +EPD
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDG--LCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 409 NSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
Y+ + GK ED ++ ++ +GV
Sbjct: 503 IY-TYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 153/340 (45%), Gaps = 49/340 (14%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ ++ +++ G DLAL +M E ++V ++++I ++ + +AL LF+
Sbjct: 823 LVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 882
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M ++ ++P+ T +S +S N + ++ S +I + + + +ALI + K
Sbjct: 883 EM-ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 941
Query: 121 GGVEVARRVVEQSEISDLDAIAFT--ALLDGYAKLGDITPARQIFDSLRNRD----VVAW 174
G + A ++ E+ +D FT +L++G+ L + A+Q+ + + +D VV +
Sbjct: 942 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 1001
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
+I G+ + D +ELFR M++ G N+ T ++ HG
Sbjct: 1002 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI----------HG--------- 1042
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEE 291
+ +A DNAQ VF + + + ++++ ++ L ++G +
Sbjct: 1043 ----------------FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 1086
Query: 292 AIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYF 331
A+ +FE + +EPD TY ++ G + G YF
Sbjct: 1087 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 1126
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 174/409 (42%), Gaps = 52/409 (12%)
Query: 33 ERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGK 92
E DIVT NS++ G+ +A+ L M++ KPD T +
Sbjct: 750 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVE-MGYKPDTVTFTTL-------------- 794
Query: 93 QIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAK 152
IH + + + V + R+V++ DL + + A+++G K
Sbjct: 795 -IHGLFLHNK----------------ASEAVALIDRMVQRGCQPDL--VTYGAVVNGLCK 835
Query: 153 LGDITPARQIFDSLR----NRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT 208
GD A + + + +VV ++ +I + DDAL LF M +G RPN T
Sbjct: 836 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 895
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI- 267
++++S + ++ + I + + ++ +ALI + K G + A+K++ +
Sbjct: 896 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 955
Query: 268 --CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
+ + ++SS+I EA ++ E M+ P+ +TY +++ V+
Sbjct: 956 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 1015
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRA---GLLQEAFKFIENMPIEPDVIAWGSL 382
+G F M+ + T++ Y +I + +A Q FK + ++ + P+++ + L
Sbjct: 1016 KGMELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 1074
Query: 383 LSSCKVYKNVDLAK--IAAERLL--LIEPDNSGAYSALANVYSACGKWE 427
L + KN LAK + E L +EPD Y+ + GKW+
Sbjct: 1075 LDG--LCKNGKLAKAMVVFEYLQRSTMEPDIY-TYNIMIEGMCKAGKWK 1120
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/520 (19%), Positives = 207/520 (39%), Gaps = 93/520 (17%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELFS 60
I ++NIMI +G+++ F +S + +++ +N+MI+G+ + G +EA L
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 61 SMLQDSSLKPDKFTLASTLSA-------------CTNLENMNLGKQIHSYIIRTEF---- 103
M +D L P+ T + + A + + + + ++F
Sbjct: 563 KMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLSSKFKREI 621
Query: 104 ---DISGAVQNALIS---MYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDIT 157
+ A +N + S +++ G R V ++ +SD++ LD L +
Sbjct: 622 EKPNRENACKNIIFSEEICSSESCGESYDYREVLRTGLSDIE-------LDDAIGLFGVM 674
Query: 158 PARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSS 217
+ F S ++ ++ ++ + D + M G N +T +++
Sbjct: 675 AQSRPFPS-----IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 729
Query: 218 RGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC---WNNDTV 274
R + L+ + ++ + I N+L+ + I +A + + + + DTV
Sbjct: 730 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 789
Query: 275 SWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
+++++I L H EA+ L ++M+ G +PD +TY V++ G + + N M
Sbjct: 790 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 849
Query: 335 ASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSSCKVYKN 391
+ KIE + Y+ +ID + +A F +EN + P+VI + SL+S Y
Sbjct: 850 EAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY-- 906
Query: 392 VDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLE 451
G+W DA+++ M +R +
Sbjct: 907 --------------------------------GRWSDASRLLSDMIER-----------K 923
Query: 452 IQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPD 491
I + F A +K ++ K +K++EE+ K P+
Sbjct: 924 INPNLVTFSALIDAFVKKGKLVK-AEKLYEEMIKRSIDPN 962
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 170/405 (41%), Gaps = 31/405 (7%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERD----IVTWNSMIAGYNQHGFDKEALELFS 60
I +++ +I+ R+D A F+ M +D +VT++++I G+ + +E +ELF
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M Q L + T + + + + + + ++ + N L+ K
Sbjct: 423 EMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 121 GGVEVARRVVE--QSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAW 174
G + A V E Q + D + +++G K G + ++F +L + +V+A+
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
MI G+ + G ++A L + M ++GP PNS T ++ R ++ A I+
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD----REASAELIK 597
Query: 235 SREDLSISVGNALITMYAK------AGSIDNAQK--VFNLICWNNDTVSWSSMIIALAQH 286
+ + I + +K + +NA K +F+ ++++ S + +
Sbjct: 598 EMRSCGFAGDASTIGLSSKFKREIEKPNRENACKNIIFSEEICSSESCGESYDYREVLRT 657
Query: 287 GLG----EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP 342
GL ++AI LF M P I + +LSA + + S+ M + I
Sbjct: 658 GLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM-EILGISH 716
Query: 343 TLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLS 384
L Y +I+ + R L A + M EPD++ SLL+
Sbjct: 717 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLN 761
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 43/296 (14%)
Query: 188 DDALELFRAMTKEGPRP---------------NSFTLAAMLSVSSRGASLNHGKQIHASA 232
DDA++LF M K P P N F L L + ++H ++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 233 IRS---REDLSISVG-----------------NALITMYAKAGSIDNAQKVFNLIC---W 269
I R LS+++ ++L+ Y + I +A + + + +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
DT +++++I L H EA+ L ++M+ G +PD +TY V++ G ++ S
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSS- 385
M KIE + Y +ID + + +A F ++N I PDV + SL+S
Sbjct: 245 LLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 386 CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
C + D +++ ++ + N +SAL + + GK +A K+ M R +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 162/358 (45%), Gaps = 50/358 (13%)
Query: 19 GRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFT 74
G IDLAL+ ++M E D+V + ++I + +AL LF+ M + ++P+ T
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVT 292
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQ-- 132
S + N + ++ S +I + + + +ALI + K G + A ++ ++
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 133 SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRD----VVAWTAMIVGYVQNGLND 188
D D +++L++G+ + A+ +F+ + ++D VV + +I G+ + +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+ +ELFR M++ G N+ T N LI
Sbjct: 413 EGMELFREMSQRGLVGNTVTY-----------------------------------NTLI 437
Query: 249 TMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
+AG D AQK+F + + D +++S ++ L ++G E+A+ +FE + +E
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA 363
PD TY ++ G VE G F + S+ ++P + Y MI + R GL +EA
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 203/460 (44%), Gaps = 23/460 (5%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALE 57
L SI +N ++S + DL ++ ++M D+ ++N +I + + AL
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 58 LFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALIS-- 115
+ M++ +PD TL+S L+ + + ++ + + E+ + N LI
Sbjct: 137 VLGKMMK-LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 116 -MYAKTG-GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN----R 169
++ K V + R+V + DL + +++G K GDI A + +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDL--FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 170 DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIH 229
DVV +T +I +DAL LF M +G RPN T +++ + ++
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 230 ASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI---CWNNDTVSWSSMIIALAQH 286
+ I + + ++ +ALI + K G + A+K+++ + + D ++SS+I H
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 287 GLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSH 346
+EA +FE M++ P+ +TY ++ VE+G F M+ + T+++
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 347 YACMIDLY--GRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL- 403
+ L+ G + Q+ FK + + + PD+I + LL Y ++ A + E L
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 404 -LIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
+EPD Y+ + GK ED + ++ +GVK
Sbjct: 494 SKMEPDIY-TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERD----IVTWNSMIAGYNQHGFDKEALELFS 60
I +++ +I+ R+D A F+ M +D +VT+N++I G+ + +E +ELF
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M Q L + T + + + ++ ++I ++ + L+ K
Sbjct: 420 EMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 121 GGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAW 174
G +E A V E + S + D + +++G K G + +F SL + +V+ +
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSR 218
T MI G+ + GL ++A LFR M ++G PNS T ++ R
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 188 DDALELFRAMTKEGPRP---------------NSFTLAAMLSVSSRGASLNHGKQIHASA 232
DDA++LF M + P P N F L ++S+ R +L +++
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL--VISLGERMQNLRISYDLYSYN 119
Query: 233 I-------RSREDLSISV---------------GNALITMYAKAGSIDNAQKVFN---LI 267
I RS+ L+++V ++L+ Y I A + + ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 268 CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+ +TV+++++I L H EA+ L ++M+A G +PD TY V++ G ++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 328 RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLS 384
S M KIE + Y +ID + +A F ++N I P+V+ + SL+
Sbjct: 240 LSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 385 S-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
C + D +++ ++ + N +SAL + + GK +A K+ M R +
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 27/355 (7%)
Query: 33 ERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGK 92
E D+VT+ S++ GY ++A+ LF +L KP+ T + + ++N
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQIL-GMGFKPNVVTYTTLIRCLCKNRHLN--- 205
Query: 93 QIHSYIIRTEFDISGAVQNALISMYAKTGGVEVAR--------RVVEQSEISDLDAIAFT 144
H+ + + +G+ N + TG E+ R R + + I + I FT
Sbjct: 206 --HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP-NVITFT 262
Query: 145 ALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMTKE 200
AL+D + K+G + A+++++ + DV + ++I G GL D+A ++F M +
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 201 GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNA 260
G PN ++ + + G +I + + LI Y G D A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 261 QKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
Q+VFN + D +++ ++ L +G E+A+ +FE M ++ + +TY ++
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 318 CTHVGLVEQGRSYFNLMASVHK--IEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+G VE F+L S+ ++P + Y MI + R GL+ EA + M
Sbjct: 443 MCKLGKVEDA---FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 158/364 (43%), Gaps = 24/364 (6%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELF 194
D + FT+LL+GY I A +FD + +VV +T +I +N + A+ELF
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
M G RPN T A+++ + ++ R + ++ ALI + K
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 255 GSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
G + A++++N++ + D ++ S+I L +GL +EA ++F M G P+ + Y
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLY---GRAGLLQEAFKFIE 368
++ VE G F M+ + T++ Y +I Y GR + QE F +
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT-YTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 369 NMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPD-NSGAYSALANVYSACGKWE 427
+ PD+ + LL V+ A + E + E D N Y+ + GK E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDKIWEEIKKLG 487
DA + + +G+K + + + F +H D +++++K+ G
Sbjct: 451 DAFDLFCSLFSKGMK----PNVITYTTMISGFCRRGLIHEA--------DSLFKKMKEDG 498
Query: 488 FIPD 491
F+P+
Sbjct: 499 FLPN 502
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 46/208 (22%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMSERDIV----TWNSMIAGYNQHGFDKEALELFSSML 63
+ +I S R++ + F +MS++ +V T+ +I GY G A E+F+ M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM- 389
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
PD IRT N L+ G V
Sbjct: 390 SSRRAPPD---------------------------IRT--------YNVLLDGLCCNGKV 414
Query: 124 EVARRVVE--QSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAM 177
E A + E + D++ + +T ++ G KLG + A +F SL ++ +V+ +T M
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 178 IVGYVQNGLNDDALELFRAMTKEGPRPN 205
I G+ + GL +A LF+ M ++G PN
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPN 502
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 165/393 (41%), Gaps = 41/393 (10%)
Query: 19 GRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLAS- 77
GR+D A F ++ + +IV +N++I G+ HG +A + S M+ + PD T S
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 78 ------------TLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEV 125
L ++ N ++SY I L+ + K G ++
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI-------------LVDGFCKLGKIDE 442
Query: 126 ARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIV 179
A V+ + L + + F L+ + K I A +IF + + DV + ++I
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 180 GYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDL 239
G + AL L R M EG N+ T +++ R + +++ + L
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIELF 296
N+LI +AG +D A+ +F + + +S + +I L + G+ EEA+E
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 297 EKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGR 356
++M+ G PD +T+ +++ G +E G + F + + I P + ++ +
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA-EGIPPDTVTFNTLMSWLCK 681
Query: 357 AGLLQEAFKFIENMPIE----PDVIAWGSLLSS 385
G + +A ++ IE P+ W LL S
Sbjct: 682 GGFVYDACLLLDE-GIEDGFVPNHRTWSILLQS 713
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 11/311 (3%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAM- 197
D I + L++G K+G + A+ +F + ++V + +I G+V +G DDA + M
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 198 TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSI 257
T G P+ T +++ + + ++ ++ L+ + K G I
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 258 DNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
D A V N + + +TV ++ +I A + EA+E+F +M G +PD T+ +
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP 374
+S V ++ M S + T++ Y +I+ + R G ++EA K + M +
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVT-YNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 375 ---DVIAWGSLLSSCKVYKNVDLAKIAAERLLLI--EPDNSGAYSALANVYSACGKWEDA 429
D I + SL+ VD A+ E++L P N + L N G E+A
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC-NILINGLCRSGMVEEA 618
Query: 430 AKIRKLMNDRG 440
+ +K M RG
Sbjct: 619 VEFQKEMVLRG 629
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 142/336 (42%), Gaps = 41/336 (12%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELF 59
++ S+ I++ G+ID A +MS + + V +N +I+ + + EA+E+F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M + KPD +T S +S ++ + + +I + N LI+ + +
Sbjct: 483 REMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 120 TGGVEVARRVVEQS--EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAM 177
G ++ AR++V + + S LD I + +L+ G + G++
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV--------------------- 580
Query: 178 IVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE 237
D A LF M ++G P++ + +++ R + + +
Sbjct: 581 ----------DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 238 DLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIE 294
I N+LI +AG I++ +F + DTV++++++ L + G +A
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 295 LFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSY 330
L ++ + G P+H T+ +L + +++ R Y
Sbjct: 691 LLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 166/398 (41%), Gaps = 56/398 (14%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDI----VTWNSMIAGYNQHGFDKEALELF 59
S S+ +++ + DLA + +M + +T+ MI G ++GF EA+ L
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+ M +D + PD T ++ ++ + K+I I R +G + + LI +
Sbjct: 427 NEMSKDG-IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 120 TGGVEVARRVVEQS--EISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VA 173
G ++ A R+ E E D F L+ K G + A + + + + V+
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ +I GY +G A +F MTK G P FT ++L +G L ++
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF----- 600
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAI 293
L +++A ++D TV +++++ A+ + G +A+
Sbjct: 601 -------------LKSLHAVPAAVD--------------TVMYNTLLTAMCKSGNLAKAV 633
Query: 294 ELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVH-----KIEPTLSHYA 348
LF +M+ I PD TY ++S GL +G++ ++ + + P Y
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLIS-----GLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 349 CMIDLYGRAGLLQEAFKF---IENMPIEPDVIAWGSLL 383
C +D +AG + F ++N+ PD++ +++
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 726
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 188/463 (40%), Gaps = 45/463 (9%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
++I+I +++ G I +L F+ M + T N+++ + G D ML
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYII----RTEFDISGAVQNALISMYAK 119
+ + PD +T + N+ + SY++ ++ + + N ++ Y K
Sbjct: 186 K-RKICPD----VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 120 TGGVEVARRVVE--QSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VA 173
G + A +++ +S+ D D + L+ + I + +R R + V
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVS-SRGASLNHGKQIHASA 232
+ +I G+ G A +L M G PN T A++ S G K +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKVF-----NLICWNNDTVSWSSMIIALAQHG 287
+ +S G L+ K D A+ + N +C ++++ MI L ++G
Sbjct: 361 AKGLTPSEVSYG-VLLDGLCKNAEFDLARGFYMRMKRNGVCVGR--ITYTGMIDGLCKNG 417
Query: 288 LGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKI--EPTLS 345
+EA+ L +M GI+PD +TY +++ VG + + ++ ++++ P
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE---IVCRIYRVGLSPNGI 474
Query: 346 HYACMIDLYGRAGLLQEAFKFIENMPIEP---DVIAWGSLLSS-CKVYKNVDLAKIAAER 401
Y+ +I R G L+EA + E M +E D + L++S CK K + A E
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE----AEEF 530
Query: 402 LLLIEPD----NSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
+ + D N+ ++ L N Y G+ A + M G
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/454 (19%), Positives = 186/454 (40%), Gaps = 32/454 (7%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSERDI----VTWNSMIAGYNQHGFDKEALELFSSM 62
++N++++ +G++ A + M+ I V+++ +I GY G +A +F M
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG- 121
+ P FT S L ++ ++ + + + N L++ K+G
Sbjct: 570 TKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 122 ---GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR-----DVVA 173
V + +V++S + D + +T+L+ G + G A R + V
Sbjct: 629 LAKAVSLFGEMVQRSILPD--SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+T + G + G + M G P+ T AM+ SR + +
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGE 290
+++ N L+ Y+K + + ++ I N D ++ S+++ + + + E
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 806
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC- 349
+++ + + G+E D T+ ++S C G + F+L+ + + +L C
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA---FDLVKVMTSLGISLDKDTCD 863
Query: 350 -MIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSS-CKVYKNVDLAKIAAERLLL 404
M+ + R QE+ + M I P+ + L++ C+V ++ A + E ++
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV-GDIKTAFVVKEEMIA 922
Query: 405 --IEPDNSGAYSALANVYSACGKWEDAAKIRKLM 436
I P N A SA+ + CGK ++A + + M
Sbjct: 923 HKICPPNV-AESAMVRALAKCGKADEATLLLRFM 955
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 160/340 (47%), Gaps = 14/340 (4%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ ++ +I+ G DLAL +M E D+V ++++I ++ +AL LF+
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT 264
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M + ++PD FT +S +S N + ++ S ++ + + + N+LI +AK
Sbjct: 265 EM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 121 GGVEVARRVVEQSEISDLDA--IAFTALLDGYAKLGDITPARQIFDSLRNRD----VVAW 174
G + A ++ ++ +D + + +L++G+ + A+QIF + ++D VV +
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
+I G+ + D +ELFR M++ G N+ T ++ + + ++ + + +
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEE 291
+I N L+ K G ++ A VF + + D +++ M + + G E+
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 292 AIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYF 331
+LF + G++PD I Y ++S GL E+ + F
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 198/457 (43%), Gaps = 52/457 (11%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELF 59
++ ++NIMI+ ++ ALA +M + IVT NS++ G+ EA+ L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M++ +PD T + + + L
Sbjct: 159 DQMVE-MGYQPDTVTFTTLV-------------------------------HGLFQHNKA 186
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN----RDVVAWT 175
+ V + R+V + DL + + A+++G K G+ A + + + DVV ++
Sbjct: 187 SEAVALVERMVVKGCQPDL--VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+I + DDAL LF M +G RP+ FT ++++S + ++ + +
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEA 292
+ + ++ N+LI +AK G + A+K+F+ + + + V+++S+I H +EA
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMID 352
++F M++ PD +TY +++ V G F M+ + T++ Y +I
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT-YTTLIH 423
Query: 353 LYGRAGLL---QEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLL--LIEP 407
+ +A Q FK + + + P+++ + +LL ++ A + E L +EP
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 408 DNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
D Y+ ++ GK ED + ++ +GVK +
Sbjct: 484 DIY-TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 46/260 (17%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
++ ++N +I G++ A F +M +R +IVT+NS+I G+ H EA ++F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 60 SSMLQDSSLKPDKFTLASTLSACTN----LENMNLGKQ----------------IHSYII 99
+ M+ L PD T + ++ ++ M L + IH +
Sbjct: 369 TLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 100 RTEFD---------ISGAVQ------NALISMYAKTGGVEVARRVVEQSEISDL--DAIA 142
++ D +S V N L+ K G +E A V E + S + D
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 143 FTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDDALELFRAMT 198
+ + +G K G + +F SL + DV+A+ MI G+ + GL ++A LF M
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 199 KEGPRPNSFTLAAMLSVSSR 218
++GP P+S T ++ R
Sbjct: 548 EDGPLPDSGTYNTLIRAHLR 567
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 43/296 (14%)
Query: 188 DDALELFRAMTKEGPRP-----------------------------------NSFTLAAM 212
D+A++LF M K P P N +T M
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 213 LSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC---W 269
++ R + L+ I ++ SI N+L+ + I A + + + +
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
DTV++++++ L QH EA+ L E+M+ G +PD +TY V++ G + +
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSS- 385
N M KIE + Y+ +ID + + +A F ++N I PDV + SL+S
Sbjct: 227 LLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 386 CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
C + D +++ ++ L N +++L + ++ GK +A K+ M R +
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 26/324 (8%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELF 59
++ +N +I S ++D AL +M + D+VT+NS+I+G G +A +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
S M + + PD FT + + AC ++ ++ + +IR D + LI
Sbjct: 245 SCMTK-REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY---- 299
Query: 120 TGGVEVARRVVEQSEISDL--------DAIAFTALLDGYAKLGDITPARQIFDSLRNRDV 171
G+ + R+ E E+ D + ++ L++GY K + ++F + R V
Sbjct: 300 --GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 172 V----AWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQ 227
V +T +I GY + G + A E+FR M G PN T +L +
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 228 IHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVF-NLICWN--NDTVSWSSMIIALA 284
I A ++ D I N +I KAG + +A ++ +L C D ++++M++ L
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 285 QHGLGEEAIELFEKMLALGIEPDH 308
+ GL EA LF KM GI P+
Sbjct: 478 KKGLRREADALFRKMKEDGILPNE 501
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 148/344 (43%), Gaps = 14/344 (4%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELF 59
SI ++ +++ R+ AL F QM + ++V +N++I G + AL+L
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLL 209
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+ M +D + PD T S +S + + ++ S + + E NALI K
Sbjct: 210 NRMEKDG-IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 120 TGGVEVARRVVEQ--SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVA 173
G V A E+ D D + ++ L+ G + A ++F + ++ DVV
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
++ +I GY ++ + ++LF M++ G N+ T ++ R LN ++I +
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGE 290
+I N L+ G I+ A + + N D V+++ +I + + G
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLM 334
+A +++ + G+ PD TY ++ GL + + F M
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 40/252 (15%)
Query: 139 DAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAWTAMIVGYVQNGLNDDALELF 194
+ + + ++DG K + A + + + DVV + ++I G +G DA +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
MTK P+ FT A++ + ++ ++ + IR D
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD---------------- 288
Query: 255 GSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGV 314
D V++S +I L + +EA E+F M++ G PD +TY +
Sbjct: 289 ----------------PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 315 LSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL---QEAFKFIENMP 371
++ VE G F M+ + T++ Y +I Y RAG L +E F+ +
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVT-YTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 372 IEPDVIAWGSLL 383
+ P++I + LL
Sbjct: 392 VHPNIITYNVLL 403
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 18/278 (6%)
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
D + L+ M G N T +L+ R + L+ I+ + SI +L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 248 ITMYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGI 304
+ + + + +A +F+ + + + V ++++I L + + A++L +M GI
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 305 EPDHITYVGVLSACTHVGLVEQGR-SYFNLMASV---HKIEPTLSHYACMIDLYGRAGLL 360
PD +TY ++S GL GR S M S +I P + + +ID + G +
Sbjct: 218 GPDVVTYNSLIS-----GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 361 QEAFKFIENM---PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSGAYSA 415
EA +F E M ++PD++ + L+ +Y +D A+ ++ PD YS
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV-TYSI 331
Query: 416 LANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQ 453
L N Y K E K+ M+ RGV + + + IQ
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 150/332 (45%), Gaps = 16/332 (4%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
S+ ++I+I G D AL+ F +M + D+VT++S+I G G + ++
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M+ ++ PD T ++ + + K++++ +I N+LI + K
Sbjct: 304 REMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 120 TGGVEVARRVVE--QSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVA 173
+ A ++ + S+ + D + ++ L++ Y K + ++F + ++ + +
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ +++G+ Q+G + A ELF+ M G P+ T +L LN +I
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGE 290
+SR L I + N +I A +D+A +F + D V+++ MI L + G
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVG 322
EA LF KM G PD TY ++ A H+G
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRA--HLG 572
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 168/386 (43%), Gaps = 19/386 (4%)
Query: 19 GRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFT 74
GR+ A+A +M E D+VT +++I G G EAL L M++ +PD+ T
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE-YGFQPDEVT 212
Query: 75 LASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSE 134
L+ N L + + S + +I K G + A + + E
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 135 ISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLND 188
+ + D + +++L+ G G ++ + R DVV ++A+I +V+ G
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 189 DALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+A EL+ M G P++ T +++ + L+ Q+ + + I + LI
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 249 TMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
Y KA +D+ ++F I +T++++++++ Q G A ELF++M++ G+
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA-- 363
P +TY +L G + + F M ++ + Y +I A + +A
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQK-SRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 364 -FKFIENMPIEPDVIAWGSLLSS-CK 387
F + + ++PDV+ + ++ CK
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCK 537
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 187/411 (45%), Gaps = 35/411 (8%)
Query: 54 EALELFSSMLQDSSLK-PDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNA 112
+A++LF SM+Q L P F + A T ++ LG + E D+
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDM--YTMTI 110
Query: 113 LISMYAKTGGVEVARRVVEQS-EIS-DLDAIAFTALLDGYAKLGDITPARQIFDSL---- 166
+I+ Y + + A V+ ++ ++ + D I F+ L++G+ G ++ A + D +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 167 RNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGA----SL 222
+ D+V + +I G G +AL L M + G +P+ T +L+ + +L
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 223 NHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN---LICWNNDTVSWSSM 279
+ +++ I++ S+ + +I K GS D+A +FN + D V++SS+
Sbjct: 231 DLFRKMEERNIKA----SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 280 IIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHK 339
I L G ++ ++ +M+ I PD +T+ ++ G + + + +N M +
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT-RG 345
Query: 340 IEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSS-CKVYKNVD-- 393
I P Y +ID + + L EA F + + EPD++ + L++S CK K VD
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA-KRVDDG 404
Query: 394 ---LAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
+I+++ L+ N+ Y+ L + GK A ++ + M RGV
Sbjct: 405 MRLFREISSKGLI----PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 164/369 (44%), Gaps = 17/369 (4%)
Query: 18 SGRIDLALAQFQQMSERDI----VTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKF 73
SG LAL F++M ER+I V ++ +I + G +AL LF+ M + +K D
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVV 281
Query: 74 TLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQS 133
T +S + N + G ++ +I +ALI ++ K G + A+ + +
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 134 EISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLN 187
+ D I + +L+DG+ K + A Q+FD + ++ D+V ++ +I Y +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNAL 247
DD + LFR ++ +G PN+ T ++ + LN K++ + S+ L
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 248 ITMYAKAGSIDNAQKVFNLICWNNDTVS---WSSMIIALAQHGLGEEAIELFEKMLALGI 304
+ G ++ A ++F + + T+ ++ +I + ++A LF + G+
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 305 EPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLY-GRAGLLQEA 363
+PD +TY ++ G + + F M P Y +I + G +GL+ +
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE-DGCTPDDFTYNILIRAHLGGSGLIS-S 579
Query: 364 FKFIENMPI 372
+ IE M +
Sbjct: 580 VELIEEMKV 588
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 135/335 (40%), Gaps = 50/335 (14%)
Query: 182 VQNGLND----DALELFRAMTKEGPRPNSFTLAAMLSVSSRGAS----LNHGKQIHASAI 233
++NG+ D DA++LF +M + P P + S +R L K + + I
Sbjct: 42 LRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI 101
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNL---ICWNNDTVSWSSMIIALAQHGLGE 290
+ +I Y + + A V + + DT+++S+++ G
Sbjct: 102 EH----DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
EA+ L ++M+ + PD +T +++ G V + + M + +P Y +
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE-YGFQPDEVTYGPV 216
Query: 351 IDLYGRAG---LLQEAFKFIENMPIEPDVIAWGSLLSS-CK---------VYKNVDLAKI 397
++ ++G L + F+ +E I+ V+ + ++ S CK ++ +++ I
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 398 AAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVH 457
A+ + YS+L GKW+D AK+ + M R + + + +
Sbjct: 277 KADVV---------TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD----VVTFSALID 323
Query: 458 IFGAEDSLHPQKDEIYKMMDKIWEEIKKLGFIPDT 492
+F E L K+ ++ E+ G PDT
Sbjct: 324 VFVKEGKLLEAKE--------LYNEMITRGIAPDT 350
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 189/447 (42%), Gaps = 65/447 (14%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELFSSML 63
+ IMISL G +D L F +M R + ++ ++I Y ++G + +LEL M
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM- 202
Query: 64 QDSSLKPDKFTLASTLSACT----NLENM-NLGKQIHSYIIRTEFDISGAVQNALISMYA 118
++ + P T + ++AC + E + L ++ I+ + N L+S A
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI----VTYNTLLSACA 258
Query: 119 KTG---GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN----RDV 171
G E+ R + I D ++ L++ + KL + + + + D+
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 172 VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS 231
++ ++ Y ++G +A+ +F M G PN+ T + +L+
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN----------------- 360
Query: 232 AIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGL 288
++ ++G D+ +++F + +N D +++ +I + G
Sbjct: 361 ------------------LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 289 GEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA 348
+E + LF M+ IEPD TY G++ AC GL E R M + + I P+ Y
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYT 461
Query: 349 CMIDLYGRAGLLQE---AFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLI 405
+I+ +G+A L +E AF + + P + + SLL S V ++ RL+
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS 521
Query: 406 E-PDNSGAYSALANVYSACGKWEDAAK 431
P N ++A Y GK+E+A K
Sbjct: 522 GIPRNRDTFNAQIEAYKQGGKFEEAVK 548
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 161/368 (43%), Gaps = 37/368 (10%)
Query: 3 RSITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALEL 58
RS+ S+ +I+ + +GR + +L +M I+T+N++I + G D E L
Sbjct: 174 RSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLG 233
Query: 59 FSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYA 118
+ ++ ++PD T + LSAC LG + + RT D G V + ++ Y+
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACA---IRGLGDEAE-MVFRTMND-GGIVPD--LTTYS 286
Query: 119 KTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMI 178
VE ++ ++ DL LG++ + D+ ++ ++
Sbjct: 287 HL--VETFGKLRRLEKVCDL--------------LGEMASGGSL------PDITSYNVLL 324
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRED 238
Y ++G +A+ +F M G PN+ T + +L++ + + +Q+ S D
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 239 LSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIEL 295
+ N LI ++ + G +F+ + N D ++ +I A + GL E+A ++
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Query: 296 FEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYG 355
+ M A I P Y GV+ A L E+ FN M V P++ + ++ +
Sbjct: 445 LQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS-NPSIETFHSLLYSFA 503
Query: 356 RAGLLQEA 363
R GL++E+
Sbjct: 504 RGGLVKES 511
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 14/254 (5%)
Query: 190 ALELFRAMTKE-GPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALI 248
+L LF+ M ++ +PN M+S+ R L+ ++ S+ ALI
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183
Query: 249 TMYAKAGSIDNAQKVFNLICWNNDTVS-----WSSMIIALAQHGLGEEAI-ELFEKMLAL 302
Y + G + + ++ + + N+ +S ++++I A A+ GL E + LF +M
Sbjct: 184 NAYGRNGRYETSLELLDRM--KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
GI+PD +TY +LSAC GL ++ F M I P L+ Y+ +++ +G+ L++
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMND-GGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 363 AFKFIENMPIE---PDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIE-PDNSGAYSALAN 418
+ M PD+ ++ LL + ++ A ++ N+ YS L N
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 419 VYSACGKWEDAAKI 432
++ G+++D ++
Sbjct: 361 LFGQSGRYDDVRQL 374
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 50/263 (19%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQM------------------------------ 31
L ITS+N+++ + SG I A+ F QM
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 32 ---------SERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSAC 82
++ D T+N +I + + G+ KE + LF M+++ +++PD T + AC
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFAC 432
Query: 83 TNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQ-SEISDLDAI 141
++I Y+ + S +I + + E A E+ +I
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 142 -AFTALLDGYAKLGDITPARQIFDSL------RNRDVVAWTAMIVGYVQNGLNDDALELF 194
F +LL +A+ G + + I L RNRD + A I Y Q G ++A++ +
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT--FNAQIEAYKQGGKFEEAVKTY 550
Query: 195 RAMTKEGPRPNSFTLAAMLSVSS 217
M K P+ TL A+LSV S
Sbjct: 551 VDMEKSRCDPDERTLEAVLSVYS 573
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 203/469 (43%), Gaps = 35/469 (7%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELF 59
++ +++I+I+ ++ LALA +M E DIVT NS++ G+ +A+ L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIR-------TEFDISGAVQNA 112
M++ +PD FT + + L N + + + R + G V N
Sbjct: 175 GQMVE-MGYQPDSFTFNTLIHG---LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 113 LISMYAKTGGVEVARRVVEQSEISDLD--AIAFTALLDGYAKLGDITPARQIFDSLRNR- 169
L K G +++A ++++ E ++ + + ++D ++ A +F + N+
Sbjct: 231 L----CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 170 ---DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGK 226
+VV + ++I G DA L M + PN T +A++ + L +
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 227 QIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI----CWNNDTVSWSSMIIA 282
+++ I+ D I ++LI + +D A+ +F L+ C+ N V+++++I
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN-VVTYNTLIKG 405
Query: 283 LAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP 342
+ +E +ELF +M G+ + +TY ++ + + F M S + P
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLP 464
Query: 343 TLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSS-CKVYKNVDLAKIA 398
+ Y+ ++D G ++ A F++++ +EPD+ + ++ CK K D +
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 399 AERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGS 447
L N Y+ + + + G E+A + + M + G + G+
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 167/367 (45%), Gaps = 15/367 (4%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ ++ I+++ G IDLAL+ ++M E +V +N++I + +AL LF+
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M + ++P+ T S + N + ++ S +I + + + +ALI + K
Sbjct: 281 EM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 121 GGVEVARRVVEQ--SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRD----VVAW 174
G + A ++ ++ D D +++L++G+ + A+ +F+ + ++D VV +
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
+I G+ + D+ +ELFR M++ G N+ T ++ + ++ + + +
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEE 291
I + L+ G ++ A VF + + D +++ MI + + G E+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 292 AIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMI 351
+LF + G++P+ +TY ++S GL E+ + F M + P Y +I
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLI 578
Query: 352 DLYGRAG 358
+ R G
Sbjct: 579 RAHLRDG 585
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 51/269 (18%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
++ ++N +I + R+D + F++MS+R + VT+ ++I G+ Q A +F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M+ D L PD T + L N +G V+ AL
Sbjct: 455 KQMVSDGVL-PDIMTYSILLDGLCN---------------------NGKVETAL------ 486
Query: 120 TGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWT 175
V +++S++ + D + +++G K G + +F SL + +VV +T
Sbjct: 487 -----VVFEYLQRSKM-EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
M+ G+ + GL ++A LFR M +EGP P+S T ++ R K A IR
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD----KAASAELIRE 596
Query: 236 REDLSISVGNA----LITMYAKAGSIDNA 260
VG+A L+T G +D +
Sbjct: 597 MRSCRF-VGDASTIGLVTNMLHDGRLDKS 624
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 123/299 (41%), Gaps = 43/299 (14%)
Query: 188 DDALELFRAMTKEGPRP---------------NSFTLAAMLSVSSRGASLNHGKQIHASA 232
DDA+ LF M K P P N F L L + ++H ++
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 233 IRS---REDLSISVG-----------------NALITMYAKAGSIDNAQKVFNLIC---W 269
I R LS+++ N+L+ + I +A + + +
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 270 NNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
D+ +++++I L +H EA+ L ++M+ G +PD +TY V++ G ++ S
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEPDVIAWGSLLSS- 385
M KIEP + Y +ID + +A F ++N I P+V+ + SL+
Sbjct: 243 LLKKMEQ-GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 386 CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
C + D +++ ++ + N +SAL + + GK +A K+ M R + +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 178/384 (46%), Gaps = 22/384 (5%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSERDI----VTWNSMIAGYNQHGFDKEALELFSSM 62
++ ++ ++ G +D AL +QM E V+ N ++ G+ + G ++AL M
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
PD++T + ++ ++ +I +++ +D N++IS K G
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 123 VEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTA 176
V+ A V++Q D + + + L+ K + A ++ L ++ DV + +
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 177 MIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAML-SVSSRGA---SLNHGKQIHASA 232
+I G + A+ELF M +G P+ FT ++ S+ S+G +LN KQ+ S
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 233 IRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI---CWNNDTVSWSSMIIALAQHGLG 289
S+ N LI + KA A+++F+ + + ++V+++++I L +
Sbjct: 466 CAR----SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
E+A +L ++M+ G +PD TY +L+ G +++ M S + EP + Y
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGT 580
Query: 350 MIDLYGRAGLLQEAFKFIENMPIE 373
+I +AG ++ A K + ++ ++
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMK 604
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 15/321 (4%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSERD----IVTWNSMIAGYNQHGFDKEALELFS 60
+ ++N +IS G + A+ QM RD VT+N++I+ + +EA EL +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL-A 388
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
+L + PD T S + N + ++ + + N LI
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 121 GGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVAW 174
G ++ A +++Q E+S I + L+DG+ K A +IFD + +R+ V +
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
+I G ++ +DA +L M EG +P+ +T ++L+ RG + I +
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLICW---NNDTVSWSSMIIALAQHGLGEE 291
+ + I LI+ KAG ++ A K+ I N +++ +I L + E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 292 AIELFEKMLALG-IEPDHITY 311
AI LF +ML PD ++Y
Sbjct: 629 AINLFREMLEQNEAPPDAVSY 649
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 178/425 (41%), Gaps = 21/425 (4%)
Query: 38 TWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSY 97
T+ +I Y Q E L + M+ + LKPD L+ + ++ L + H+
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 98 IIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGD 155
+ + N LI + + A ++E L D FT ++ GY + GD
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 156 ITPARQIFDSLRNRDV----VAWTAMIVGYVQNGLNDDALELFRAMT-KEGPRPNSFTLA 210
+ A +I + + V+ ++ G+ + G +DAL + M+ ++G P+ +T
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 211 AMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI--- 267
+++ + + H +I ++ D + N++I+ K G + A +V + +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 268 -CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ 326
C N TV+++++I L + EEA EL + + GI PD T+ ++ + L
Sbjct: 360 DCSPN-TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG---LCLTRN 415
Query: 327 GRSYFNLMASVHK--IEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEP---DVIAWGS 381
R L + EP Y +ID G L EA ++ M + VI + +
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 382 LLSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
L+ CK K + +I E + NS Y+ L + + EDAA++ M G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 441 VKKEQ 445
K ++
Sbjct: 536 QKPDK 540
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 21/381 (5%)
Query: 20 RIDLALAQFQQMSERD----IVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTL 75
RID A+ F +M + + + T+ +I EAL L M +++ +KP+ T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNIHTY 361
Query: 76 ASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEI 135
+ + + +++ ++ + NALI+ Y K G +E A VVE E
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 136 SDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDD 189
L + + L+ GY K ++ A + + + R DVV + ++I G ++G D
Sbjct: 422 RKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
A L M G P+ +T +M+ + + + S + + ++ + ALI
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 250 MYAKAGSIDNA----QKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIE 305
Y KAG +D A +K+ + C N +++++++I L G +EA L EKM+ +G++
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPN-SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 306 PDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFK 365
P T ++ G + S F M S +P Y I Y R G L +A
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLS-SGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 366 FIENM---PIEPDVIAWGSLL 383
+ M + PD+ + SL+
Sbjct: 659 MMAKMRENGVSPDLFTYSSLI 679
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 196/450 (43%), Gaps = 45/450 (10%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELFS 60
I +N +++ G +D + +M E +I T+N M+ GY + G +EA + S
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
+++ + L PD FT S + ++++ ++ + E + G +N + +
Sbjct: 243 KIVE-AGLDPDFFTYTSLIMGYCQRKDLD-----SAFKVFNEMPLKGCRRNEVAYTHL-I 295
Query: 121 GGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVG 180
G+ VARR+ E +D + K+ D + F ++R +T +I
Sbjct: 296 HGLCVARRIDEA--------------MDLFVKMKD----DECFPTVR-----TYTVLIKS 332
Query: 181 YVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLS 240
+ +AL L + M + G +PN T ++ +++ + +
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 241 ISVGNALITMYAKAGSIDNAQKVFNLI---CWNNDTVSWSSMIIALAQHGLGEEAIELFE 297
+ NALI Y K G I++A V L+ + +T +++ +I + + +A+ +
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLN 451
Query: 298 KMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRA 357
KML + PD +TY ++ G + +LM + P Y MID ++
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPDQWTYTSMIDSLCKS 510
Query: 358 GLLQEA---FKFIENMPIEPDVIAWGSLLSS-CKVYKNVDLAKIAAERLLLIEP-DNSGA 412
++EA F +E + P+V+ + +L+ CK K VD A + E++L NS
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK-VDEAHLMLEKMLSKNCLPNSLT 569
Query: 413 YSALANVYSACGKWEDAAKIRKLMNDRGVK 442
++AL + A GK ++A + + M G++
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 151/351 (43%), Gaps = 56/351 (15%)
Query: 111 NALISMYAKTGGVEVARRV-VEQSEISDLDAI-AFTALLDGYAKLGDITPARQ----IFD 164
N L++ A+ G V+ ++V +E E I + +++GY KLG++ A Q I +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 165 SLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNH 224
+ + D +T++I+GY Q D A ++F M +G R N +
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL------------ 294
Query: 225 GKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI----CWNNDTVSWSSMI 280
IH + R ID A +F + C+ +++ +I
Sbjct: 295 ---IHGLCVARR--------------------IDEAMDLFVKMKDDECFPT-VRTYTVLI 330
Query: 281 IALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKI 340
+L EA+ L ++M GI+P+ TY ++ + E+ R M +
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE-KGL 389
Query: 341 EPTLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSS-CK--VYKNVDL 394
P + Y +I+ Y + G++++A +E M + P+ + L+ CK V+K + +
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGV 449
Query: 395 AKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQ 445
ER +L PD Y++L + G ++ A ++ LMNDRG+ +Q
Sbjct: 450 LNKMLERKVL--PD-VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 170/418 (40%), Gaps = 47/418 (11%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELFSSM 62
++N +I + S + A+ +M ER D+VT+NS+I G + G A L S +
Sbjct: 430 TYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS-L 487
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ D L PD++T S + + + + + + + + + + ALI Y K G
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 123 VEVARRVVEQ--SEISDLDAIAFTALLDGYAKLGDITPARQIFDSL----RNRDVVAWTA 176
V+ A ++E+ S+ +++ F AL+ G G + A + + + V T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 177 MIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR 236
+I +++G D A F+ M G +P++ T + R L + + A +
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSM--IIALAQHGL------ 288
+ ++LI Y G + A F+++ DT S ++L +H L
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFA---FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 289 --GEEA--------------IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFN 332
G E +EL EKM+ + P+ +Y ++ VG + F+
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 333 LMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMPIEPDVIAWGSL--LSSCKV 388
M I P+ + ++ + EA K ++ D+I G L L SCKV
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD------DMICVGHLPQLESCKV 836
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 135/319 (42%), Gaps = 26/319 (8%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELF 59
++++ I+I + G D A ++FQQM ++ D T+ + I Y + G +A ++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+ M +++ + PD FT +S + +L N + + T + S Q+ +S+
Sbjct: 661 AKM-RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS---QHTFLSLIKH 716
Query: 120 TGGVEVARRVVEQSEISDL-DAIAFTALLDGYAKLGD--ITPARQIFDSLRNRDVVAWTA 176
++ ++ + E+ + + + F +++ K+ + +TP + ++ L
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL---------- 766
Query: 177 MIVGYVQNGLNDDALELFRAMTK-EGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
I+G + G A ++F M + EG P+ A+LS + N ++ I
Sbjct: 767 -ILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFN--LIC-WNNDTVSWSSMIIALAQHGLGEEA 292
+ LI K G + VF L C + D ++W +I + + GL E
Sbjct: 826 GHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAF 885
Query: 293 IELFEKMLALGIEPDHITY 311
ELF M G + TY
Sbjct: 886 YELFNVMEKNGCKFSSQTY 904
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 201/467 (43%), Gaps = 36/467 (7%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEAL 56
R+ ++N MI + ++G+ D A + ++ + ++ +N ++ + G EAL
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 57 ELFSSMLQDSSLKPDKFTLASTLSACTNLENM--NLGKQIHSYIIRTEFDISGAVQNA-- 112
++F M +D+ A LS L +M GK ++ +R +G N
Sbjct: 364 KVFEEMKKDA---------APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 113 ---LISMYAKTGGVEVARRVVEQSE--ISDLDAIAFTALLDGYAKLGDITPARQIFDSLR 167
++ K+ ++ A + E+ + + D I F +L+DG K+G + A ++++ +
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 168 NRDV----VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLN 223
+ D + +T++I + +G +D ++++ M + P+ L + +
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 224 HGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMI 280
G+ + R + LI KAG + ++F + DT +++ +I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 281 IALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKI 340
+ G +A +L E+M G EP +TY V+ + +++ F A +I
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE-EAKSKRI 653
Query: 341 EPTLSHYACMIDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSSCKVYKNVDLAKI 397
E + Y+ +ID +G+ G + EA+ +E + + P++ W SLL + + ++ A +
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 398 AAERL--LLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
+ + L P N Y L N K+ A + M +G+K
Sbjct: 714 CFQSMKELKCTP-NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/459 (18%), Positives = 188/459 (40%), Gaps = 26/459 (5%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELF 59
+ +++ +I D+ L FQQM E + + ++I G+ + G AL L
Sbjct: 167 AFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M + SSL D + + + +++ + I ++I + K
Sbjct: 227 DEM-KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 120 TGGVEVARRVVEQSEISDLDAI--AFTALLDGYAKLGDITPARQIFDSLRNR----DVVA 173
++ A + E E + A+ ++ GY G A + + R + V+A
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ ++ + G D+AL++F M K+ PN T ++ + R L+ ++ S
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICW---NNDTVSWSSMIIALAQHGLGE 290
++ ++ N ++ K+ +D A +F + + D +++ S+I L + G +
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
+A +++EKML + I Y ++ + G E G + M + P L
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN-QNCSPDLQLLNTY 523
Query: 351 IDLYGRAGLLQEA---FKFIENMPIEPDVIAWG----SLLSSCKVYKNVDLAKIAAERLL 403
+D +AG ++ F+ I+ PD ++ L+ + + +L E+
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 404 LIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVK 442
+++ + AY+ + + + CGK A ++ + M +G +
Sbjct: 584 VLD---TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 139/332 (41%), Gaps = 14/332 (4%)
Query: 9 NIMISLHMNSGRIDLALAQFQQMSERDIV----TWNSMIAGYNQHGFDKEALELFSSMLQ 64
N + +G + A F+++ R V +++ +I G + GF E ELF SM +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 65 DSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVE 124
+ D + +N Q+ + F+ + ++I AK ++
Sbjct: 581 QGCVL-DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 125 VARRVVEQ--SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMI 178
A + E+ S+ +L+ + +++L+DG+ K+G I A I + L + ++ W +++
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRED 238
V+ ++AL F++M + PN T +++ + N +
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 239 LSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIEL 295
S +I+ AKAG+I A +F+ N D+ +++MI L+ +A L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 296 FEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
FE+ G+ + T V +L +EQ
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 149/323 (46%), Gaps = 14/323 (4%)
Query: 8 WNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELFSSML 63
+N +I +D AL F++M + ++VT++S+I+ +G +A L S M+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+ + PD FT ++ + A + ++++ +++ D S ++LI+ + +
Sbjct: 319 E-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 124 EVARRVVE--QSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAM 177
+ A+++ E S+ D + + L+ G+ K + ++F + R + V + +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 178 IVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE 237
I G Q G D A E+F+ M +G PN T +L + L + RS+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 238 DLSISVGNALITMYAKAGSIDNAQKVF---NLICWNNDTVSWSSMIIALAQHGLGEEAIE 294
+ +I N +I KAG +++ +F +L D V++++MI + G EEA
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 295 LFEKMLALGIEPDHITYVGVLSA 317
LF++M G P+ Y ++ A
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRA 580
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 195/453 (43%), Gaps = 50/453 (11%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
+++I+I+ ++ LALA +M E +IVT +S++ GY EA+ L M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
+ +P+ T + IH + + + ALI
Sbjct: 178 FV-TGYQPNTVTFNTL---------------IHGLFLHNK----ASEAMALID------- 210
Query: 123 VEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN----RDVVAWTAMI 178
R+V + DL + + +++G K GD A + + + V+ + +I
Sbjct: 211 -----RMVAKGCQPDL--VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 179 VGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRED 238
G + DDAL LF+ M +G RPN T ++++S + ++ + I + +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 239 LSISVGNALITMYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEEAIEL 295
+ +ALI + K G + A+K+++ + + V++SS+I H +EA ++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 296 FEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLY- 354
FE M++ PD +TY ++ VE+G F M+ + T+++ + L+
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 355 -GRAGLLQEAFKFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLL--IEPDNSG 411
G + QE FK + + + P+++ + +LL ++ A + E L +EP
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP-TIY 502
Query: 412 AYSALANVYSACGKWEDAAKIRKLMNDRGVKKE 444
Y+ + GK ED + ++ +GVK +
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 164/358 (45%), Gaps = 18/358 (5%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ ++ ++++ G DLA +M E ++ +N++I G ++ +AL LF
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M + ++P+ T +S +S N + ++ S +I + + +ALI + K
Sbjct: 281 EM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 121 GGVEVARRVVEQSEISDLDA--IAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAW 174
G + A ++ ++ +D + +++L++G+ + A+Q+F+ + ++ DVV +
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
+I G+ + ++ +E+FR M++ G N+ T ++ + + ++I +
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEE 291
+I N L+ K G ++ A VF + + +++ MI + + G E+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 292 AIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYAC 349
+LF + G++PD + Y ++S G E+ + F M K + TL + C
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM----KEDGTLPNSGC 573
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
SI +++ +I+ R+D A F+ M + D+VT+N++I G+ ++ +E +E+F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M Q L + T + + ++ ++I ++ + N L+ K
Sbjct: 420 REMSQ-RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 120 TGGVEVARRVVEQSEISDLDAIAFT--ALLDGYAKLGDITPARQIFDSLRNR----DVVA 173
G +E A V E + S ++ +T +++G K G + +F +L + DVVA
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNS 206
+ MI G+ + G ++A LF+ M ++G PNS
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 61/347 (17%)
Query: 183 QNGLN----DDALELFRAMTKEGPRPNSFTLAAMLSVSSR----GASLNHGKQIHASAI- 233
+NGL+ DDA+ LF M K P P+ + +LS ++ ++ G+Q+ I
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 234 ---------------RSREDLSISV---------------GNALITMYAKAGSIDNAQKV 263
RS+ L+++V ++L+ Y + I A +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 264 FN---LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTH 320
+ + + +TV+++++I L H EA+ L ++M+A G +PD +TY V++
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN---- 229
Query: 321 VGLVEQGRS--YFNLMASVH--KIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIE 373
GL ++G + FNL+ + K+EP + Y +ID + + +A FK +E I
Sbjct: 230 -GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 374 PDVIAWGSLLSS-CKVYKNVDLAKIAAERL-LLIEPDNSGAYSALANVYSACGKWEDAAK 431
P+V+ + SL+S C + D +++ ++ + I PD +SAL + + GK +A K
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD-VFTFSALIDAFVKEGKLVEAEK 347
Query: 432 IRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDK 478
+ D VK+ S + + ++ F D L K M+ K
Sbjct: 348 LY----DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 206/494 (41%), Gaps = 55/494 (11%)
Query: 1 RLRSITSWNIMISLHMNSGRIDLALAQFQQMSER-----DIVTWNSMIAGYNQHGFDKEA 55
+L S +S++++I ++ S R+ + F+ M + ++ T ++++ G + A
Sbjct: 152 KLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLA 211
Query: 56 LELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALIS 115
+ELF+ M+ ++PD + + + L++++ K++ +++ T D++ N LI
Sbjct: 212 MELFNDMVS-VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 116 MYAKTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFD--------- 164
K V A + + DL D + + L+ G K+ + ++ D
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 165 ----------SLRNRDVVAWTAMIVG-----------YVQNGLND---------DALELF 194
LR R + +V +V N L D +A LF
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 195 RAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKA 254
M K G RPN T + ++ + R L+ + + LS+ N+LI + K
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 255 GSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITY 311
G I A+ + V+++S++ G +A+ L+ +M GI P T+
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 312 VGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP 371
+LS GL+ FN MA + ++P Y MI+ Y G + +AF+F++ M
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWN-VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 372 ---IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEPD-NSGAYSALANVYSACGKWE 427
I PD ++ L+ + AK+ + L + N Y+ L + + GK E
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 428 DAAKIRKLMNDRGV 441
+A + + M RGV
Sbjct: 630 EALSVCQEMVQRGV 643
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 159/378 (42%), Gaps = 23/378 (6%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDI----VTWNSMIAGYNQHGFDKEALELF 59
SI ++ ++S +G I A+ F +M+E ++ VT+N MI GY + G +A E
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M + + PD ++ + + K + + +++ L+ + +
Sbjct: 566 KEM-TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 120 TGGVEVARRVVEQ--SEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVA 173
G +E A V ++ DLD + + L+DG K D + + +R D V
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+T+MI + G +A ++ M EG PN T A+++ + +N ++ S +
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA-EVLCSKM 743
Query: 234 RSREDLSISVGNALITMYAKAGSID--NAQKVFNLICWN--NDTVSWSSMIIALAQHGLG 289
+ + V G +D A ++ N I +T +++ +I + G
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRI 803
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP------T 343
EEA EL +M+ G+ PD ITY +++ V++ +N M I P T
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE-KGIRPDRVAYNT 862
Query: 344 LSHYACMIDLYGRAGLLQ 361
L H C+ G+A L+
Sbjct: 863 LIHGCCVAGEMGKATELR 880
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/538 (19%), Positives = 202/538 (37%), Gaps = 126/538 (23%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELFSS 61
+++I+I + G++D AL+ +M + + +NS+I G+ + G D A E F +
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG-DISAAEGFMA 461
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
+ + L+P T S + + G + AL +Y +
Sbjct: 462 EMINKKLEPTVVTYTSLMGG---------------------YCSKGKINKAL-RLYHEMT 499
Query: 122 GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNRDV----VAWTAM 177
G +A + FT LL G + G I A ++F+ + +V V + M
Sbjct: 500 GKGIAPSIY-----------TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 178 IVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE 237
I GY + G A E + MT++G P++++ ++ + K +
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 238 DLSISVGNALITMYAKAGSIDNAQKV----------FNLICWN----------------- 270
+L+ L+ + + G ++ A V +L+C+
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 271 -----------NDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACT 319
D V ++SMI A ++ G +EA +++ M+ G P+ +TY V++
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 320 HVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDL-------------------------- 353
G V + + M V + P Y C +D+
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 354 ---------YGRAGLLQEAFKFIENM---PIEPDVIAWGSLLSS-CK---VYKNVDLAKI 397
+ R G ++EA + I M + PD I + ++++ C+ V K ++L
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 398 AAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNE 455
E+ I PD AY+ L + G+ A ++R M +G+ +S N+
Sbjct: 848 MTEK--GIRPDRV-AYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSND 902
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 170/395 (43%), Gaps = 47/395 (11%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALE 57
+ + ++NI+I+ +I LALA +M E IVT +S++ GY +A+
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 58 LFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMY 117
L M++ +PD T + IH + +
Sbjct: 177 LVDQMVE-MGYRPDTITFTTL---------------IHGLFLHNK--------------- 205
Query: 118 AKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVA 173
+ V + R+V++ +L + + +++G K GD A + + + DVV
Sbjct: 206 -ASEAVALVDRMVQRGCQPNL--VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ +I + DDAL LF+ M +G RPN T ++++S + Q+ + I
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLI---CWNNDTVSWSSMIIALAQHGLGE 290
+ + ++ NALI + K G A+K+++ + + D +++S++ H +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
+A ++FE M++ PD +TY ++ VE G F M+ + T+++ +
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 351 IDLY--GRAGLLQEAFKFIENMPIEPDVIAWGSLL 383
L+ G Q+ FK + + + PD++ + LL
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 209/456 (45%), Gaps = 20/456 (4%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
SI + + +++ + + RI A+A QM E D +T+ ++I G H EA+ L
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M+Q +P+ T ++ + +L + + + + + + N +I K
Sbjct: 214 DRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 120 TGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVA 173
V+ A + ++ E + + + +++L+ G + A Q+ + N ++V
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ A+I +V+ G +A +L+ M K P+ FT ++++ L+ KQ+ +
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGE 290
+ N LI + K+ +++ ++F + DTV+++++I L G +
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
A ++F++M++ G+ PD +TY +L + G +E+ F+ M +I+ + Y M
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYTTM 511
Query: 351 IDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEP 407
I+ +AG + + + ++ ++P+V+ + +++S + + A +++ P
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 408 -DNSGAYSALANVYSACG-KWEDAAKIRKLMNDRGV 441
NSG Y+ L + G K A IR++ + R V
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 607
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 133/311 (42%), Gaps = 51/311 (16%)
Query: 182 VQNGLND----DALELFRAMTKEGPRPNSFTLAAMLS----------VSSRGASLNHGKQ 227
++NGL+D DA+ LF M K P P+ +LS V S G + +
Sbjct: 57 LRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI 116
Query: 228 IHA--------SAIRSREDLSISVGNALITMYAKAG---SIDNAQKVFNLIC-------- 268
+H + R +S+++ AL+ K G SI + N C
Sbjct: 117 VHGLYTYNILINCFCRRSQISLAL--ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 269 -----------WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSA 317
+ DT++++++I L H EA+ L ++M+ G +P+ +TY V++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 318 CTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEA---FKFIENMPIEP 374
G + + N M + KIE + + +ID + + +A FK +E I P
Sbjct: 235 LCKRGDTDLALNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 375 DVIAWGSLLSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDAAKIR 433
+V+ + SL+S C + D +++ ++ + N ++AL + + GK+ +A K+
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 434 KLMNDRGVKKE 444
M R + +
Sbjct: 354 DDMIKRSIDPD 364
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 160/362 (44%), Gaps = 18/362 (4%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D+ ++++I G+ ++ +A+++F+ ML+ + + ++S L + N + +
Sbjct: 325 DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK-RINCVIVSSILQCYCQMGNFSEAYDL 383
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAK 152
T + N K G VE A + + + D I +T L+ G
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCL 443
Query: 153 LGDITPARQIFDSL----RNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT 208
G + A + + + D+V + + G NGL +A E + M G +P T
Sbjct: 444 QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503
Query: 209 LAAMLSVSSRGASLNHGKQIHAS-AIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
++ L+ + + S +SRE+ +++ + AG +D+A + F +
Sbjct: 504 HNMVIEGLIDAGELDKAEAFYESLEHKSREN-----DASMVKGFCAAGCLDHAFERFIRL 558
Query: 268 CWNNDTVSWSSMIIAL-AQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQ 326
+ + ++ +L A+ +A +L ++M LG+EP+ Y ++ A V V +
Sbjct: 559 EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRK 618
Query: 327 GRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLL 383
R +F ++ + KI P L Y MI+ Y R ++A+ E+M ++PDV+ + LL
Sbjct: 619 AREFFEILVT-KKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Query: 384 SS 385
+S
Sbjct: 678 NS 679
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 162/371 (43%), Gaps = 17/371 (4%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSML 63
+ + N++I +++G +D A A ++ + + SM+ G+ G A E F L
Sbjct: 500 TYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIR-L 558
Query: 64 QDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGV 123
+ K FTL ++L C + ++ + + + + + ++ LI + + V
Sbjct: 559 EFPLPKSVYFTLFTSL--CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNV 616
Query: 124 EVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY 181
AR E + D +T +++ Y +L + A +F+ ++ RDV +V Y
Sbjct: 617 RKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDV---KPDVVTY 673
Query: 182 VQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA--SAIRSREDL 239
+D L++ R M P+ M++ R LN K+++A ++ RE +
Sbjct: 674 SVLLNSDPELDMKREMEAFDVIPDVVYYTIMIN---RYCHLNDLKKVYALFKDMKRREIV 730
Query: 240 SISVGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKM 299
V ++ ++ K F++ D ++ +I + G EA +F++M
Sbjct: 731 PDVVTYTVLLKNKPERNLSREMKAFDV---KPDVFYYTVLIDWQCKIGDLGEAKRIFDQM 787
Query: 300 LALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGL 359
+ G++PD Y +++ C +G +++ + F+ M ++P + Y +I R G
Sbjct: 788 IESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE-SGVKPDVVPYTALIAGCCRNGF 846
Query: 360 LQEAFKFIENM 370
+ +A K ++ M
Sbjct: 847 VLKAVKLVKEM 857
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 11/215 (5%)
Query: 172 VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS 231
+A+ ++ G +DA + M K G P+ + +A++ + ++ +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 232 AIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGL 288
++ R+ ++ + ++++ Y + G+ A +F N D V ++ AL + G
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 289 GEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKI--EPTLSH 346
EEAIELF +M GI PD I Y ++ C G F+LM + P +
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDA---FDLMIEMDGTGKTPDIVI 468
Query: 347 YACMIDLYGRAGLLQEAF---KFIENMPIEPDVIA 378
Y + GL QEAF K +EN ++P +
Sbjct: 469 YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 35 DIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQI 94
D+V + MI Y K+ LF M + + PD T L N NL +++
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDM-KRREIVPDVVTYTVLLK---NKPERNLSREM 752
Query: 95 HSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQSEIS--DLDAIAFTALLDGYAK 152
++ ++ + LI K G + A+R+ +Q S D DA +TAL+ K
Sbjct: 753 KAFDVKPDV----FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 153 LGDITPARQIFDSL----RNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFT 208
+G + A+ IFD + DVV +TA+I G +NG A++L + M ++G +P +
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Query: 209 LAAM 212
L+A+
Sbjct: 869 LSAV 872
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 50/335 (14%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
++NI+I G+ + AL MS E DIVT+N++I G+ + +A E+F +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
S PD T S +IS Y K G
Sbjct: 268 KSGSVCSPDVVTYTS-----------------------------------MISGYCKAGK 292
Query: 123 VEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRN----RDVVAWTA 176
+ A +++ + + F L+DGYAK G++ A +I + + DVV +T+
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 177 MIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR 236
+I GY + G L+ M G PN+FT + +++ L +++
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLI----CWNNDTVSWSSMIIALAQHGLGEEA 292
+ N +I + KAG ++ A + + C D ++++ +II G EA
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC-KPDKITFTILIIGHCMKGRMFEA 471
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+ +F KM+A+G PD IT +LS G+ ++
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 166/396 (41%), Gaps = 54/396 (13%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS-- 61
S ++N++ +G DLA F+ M + D V+ N+ + G+ F ++ F++
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECM-KSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
+LQ ++ + S L+ L+ + ++ +R + N LI G
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 122 GVEVARRV--VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN-----RDVVAW 174
E A + V + D + + L+ G+ K ++ A ++F +++ DVV +
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
T+MI GY + G +A L M + G P + T
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF------------------------- 315
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQ----KVFNLICWNNDTVSWSSMIIALAQHGLGE 290
N L+ YAKAG + A+ K+ + C+ D V+++S+I + G
Sbjct: 316 ----------NVLVDGYAKAGEMLTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQVS 364
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
+ L+E+M A G+ P+ TY +++A + + + R +AS I P Y +
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS-KDIIPQPFMYNPV 423
Query: 351 IDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLL 383
ID + +AG + EA +E M +PD I + L+
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 11/265 (4%)
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLSISV 243
GL+D A ++F M +G PN+ L ++S + L+ A ++S E + V
Sbjct: 117 GLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT---ALLLQSFEVEGCCMV 173
Query: 244 GNALITMYAKAGSIDNAQKVFN---LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
N+L+ K +++A K+F+ NDT +++ +I L G E+A+EL M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
G EPD +TY ++ + + F + S P + Y MI Y +AG +
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 361 QEAFKFIENM---PIEPDVIAWGSLLSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSAL 416
+EA +++M I P + + L+ K + + +I + + + +++L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 417 ANVYSACGKWEDAAKIRKLMNDRGV 441
+ Y G+ ++ + MN RG+
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGM 378
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 50/335 (14%)
Query: 7 SWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFSSM 62
++NI+I G+ + AL MS E DIVT+N++I G+ + +A E+F +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 63 LQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGG 122
S PD T S +IS Y K G
Sbjct: 268 KSGSVCSPDVVTYTS-----------------------------------MISGYCKAGK 292
Query: 123 VEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRN----RDVVAWTA 176
+ A +++ + + F L+DGYAK G++ A +I + + DVV +T+
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 177 MIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSR 236
+I GY + G L+ M G PN+FT + +++ L +++
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 237 EDLSISVGNALITMYAKAGSIDNAQKVFNLI----CWNNDTVSWSSMIIALAQHGLGEEA 292
+ N +I + KAG ++ A + + C D ++++ +II G EA
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC-KPDKITFTILIIGHCMKGRMFEA 471
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQG 327
+ +F KM+A+G PD IT +LS G+ ++
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 166/396 (41%), Gaps = 54/396 (13%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDIVTWNSMIAGYNQHGFDKEALELFSS-- 61
S ++N++ +G DLA F+ M + D V+ N+ + G+ F ++ F++
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECM-KSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
+LQ ++ + S L+ L+ + ++ +R + N LI G
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 122 GVEVARRV--VEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRN-----RDVVAW 174
E A + V + D + + L+ G+ K ++ A ++F +++ DVV +
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 175 TAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIR 234
T+MI GY + G +A L M + G P + T
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF------------------------- 315
Query: 235 SREDLSISVGNALITMYAKAGSIDNAQ----KVFNLICWNNDTVSWSSMIIALAQHGLGE 290
N L+ YAKAG + A+ K+ + C+ D V+++S+I + G
Sbjct: 316 ----------NVLVDGYAKAGEMLTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQVS 364
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
+ L+E+M A G+ P+ TY +++A + + + R +AS I P Y +
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS-KDIIPQPFMYNPV 423
Query: 351 IDLYGRAGLLQEAFKFIENM---PIEPDVIAWGSLL 383
ID + +AG + EA +E M +PD I + L+
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 11/265 (4%)
Query: 185 GLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSRE-DLSISV 243
GL+D A ++F M +G PN+ L ++S + L+ A ++S E + V
Sbjct: 117 GLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT---ALLLQSFEVEGCCMV 173
Query: 244 GNALITMYAKAGSIDNAQKVFN---LICWNNDTVSWSSMIIALAQHGLGEEAIELFEKML 300
N+L+ K +++A K+F+ NDT +++ +I L G E+A+EL M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 301 ALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLL 360
G EPD +TY ++ + + F + S P + Y MI Y +AG +
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 361 QEAFKFIENM---PIEPDVIAWGSLLSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSAL 416
+EA +++M I P + + L+ K + + +I + + + +++L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 417 ANVYSACGKWEDAAKIRKLMNDRGV 441
+ Y G+ ++ + MN RG+
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGM 378
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 50/341 (14%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS----ERDIVTWNSMIAGYNQHGFDKEALELFS 60
+ ++ +I+ G DLAL +M E D+V +N++I G ++ +A +LF+
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 61 SMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKT 120
M + +KPD FT N LIS
Sbjct: 275 KM-ETKGIKPDVFTY-----------------------------------NPLISCLCNY 298
Query: 121 GGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR-----DVVA 173
G A R++ ++ D + F AL+D + K G + A +++D + DVVA
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ +I G+ + ++ +E+FR M++ G N+ T ++ + ++ + + +
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGE 290
I N L+ G+++ A VF + + D V++++MI AL + G E
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYF 331
+ +LF + G++P+ +TY ++S GL E+ + F
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 207/479 (43%), Gaps = 35/479 (7%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELF 59
++ +++I I+ ++ LALA +M + IVT NS++ G+ EA+ L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 60 SSMLQDSSLKPDKFTLASTLSACTN----LENMNLGKQIHSYIIRTEFDISGAVQNALIS 115
M++ +PD T + + E + L +++ + + GAV N L
Sbjct: 169 DQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL-- 225
Query: 116 MYAKTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR---- 169
K G ++A ++ + E + D + + ++DG K + A +F+ + +
Sbjct: 226 --CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 170 DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIH 229
DV + +I G DA L M ++ P+ A++ + L ++++
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 230 ASAIRSREDLSISVG-NALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQ 285
++S+ V N LI + K ++ +VF + +TV+++++I Q
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 286 HGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLS 345
+ A +F++M++ G+ PD +TY +L + G VE F M ++ +
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK-RDMKLDIV 462
Query: 346 HYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSCKVYKNVDLAKIAAERL 402
Y MI+ +AG +++ + ++ ++P+V+ + +++S + L + A
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG---FCRKGLKEEADALF 519
Query: 403 LLIEPD----NSGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVH 457
+ ++ D NSG Y+ L G +A++ K M G + S++ + N +H
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD-ASTFGLVTNMLH 577
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 16/293 (5%)
Query: 148 DGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSF 207
D GD+ +R F S +V ++ ++ + D + L M G N +
Sbjct: 58 DAIGLFGDMVKSRP-FPS-----IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 208 TLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI 267
T + ++ R + L+ I ++ SI N+L+ + I A + + +
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 268 C---WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLV 324
+ DTV++++++ L QH EA+ L E+M+ G +PD +TY V++ G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 325 EQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGS 381
+ + N M KIE + Y +ID + + +AF M I+PDV +
Sbjct: 232 DLALNLLNKMEK-GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 382 LLSS-CKVYKNVDLAKIAAERLLL-IEPDNSGAYSALANVYSACGKWEDAAKI 432
L+S C + D +++ ++ L I PD ++AL + + GK +A K+
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLV-FFNALIDAFVKEGKLVEAEKL 342
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 193/442 (43%), Gaps = 66/442 (14%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQM----SERDIVTWNSMIAGYNQHGFDKEALELF 59
++ + +IMI+ ++ LA + ++ E + +T++++I G G EALEL
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 60 SSMLQDSSLKPDKFTLASTLSA-CTNLENMNLGKQIHSYIIRTEFDISGAVQNAL----- 113
M++ KPD T+ + ++ C + GK+ + ++ + G NA+
Sbjct: 182 DRMVEMGH-KPDLITINTLVNGLCLS------GKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 114 ISMYAKTGGVEVARRVVEQSEISD--LDAIAFTALLDGYAKLGDITPARQIFDSLRNR-- 169
+++ K+G +A ++ + E + LDA+ ++ ++DG K G + A +F+ + +
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 170 --DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQ 227
+++ + +I G+ G DD +L R M K PN T + ++ + L ++
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 228 IHASAIR-----------------SRE----------DLSISVG--------NALITMYA 252
+H I +E DL +S G N LI Y
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 253 KAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHI 309
KA ID+ ++F + DTV+++++I + G A ELF++M++ + P+ +
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 310 TYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIEN 369
TY +L G E+ F + K+E + Y +I A + +A+ +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 370 MP---IEPDVIAWGSLLSS-CK 387
+P ++P V + ++ CK
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCK 555
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 155/360 (43%), Gaps = 61/360 (16%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
+I ++NI+I N+GR D + M +R ++VT++ +I + + G +EA EL
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M+ + PD T S + +++ Q+ ++ D + N LI+ Y K
Sbjct: 357 KEMIH-RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 120 TG----GVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DV 171
G+E+ R++ + ++D + + L+ G+ +LG + A+++F + +R ++
Sbjct: 416 ANRIDDGLELFRKMSLRGVVAD--TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 172 VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHAS 231
V + ++ G NG ++ ALE+F + K
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEK-------------------------------- 501
Query: 232 AIRSREDLSISVGNALITMYAKAGSIDNAQKVF---NLICWNNDTVSWSSMIIALAQHGL 288
S+ +L I + N +I A +D+A +F L +++ MI L + G
Sbjct: 502 ---SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 289 GEEAIELFEKMLALGIEPDHITY-------VGVLSACTHVGLVEQ-GRSYFNLMASVHKI 340
EA LF KM G PD TY +G A V L+E+ R F++ AS K+
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 164/386 (42%), Gaps = 53/386 (13%)
Query: 6 TSWNIMISLHMNSGRIDLALAQFQQMSERDI----VTWNSMIAGYNQHGFDKEALELFSS 61
++ ++++ SG+ LA+ ++M ER+I V ++ +I G +HG A LF+
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 62 MLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTG 121
M + + + T + N + G ++ +I+ + + + + LI + K G
Sbjct: 289 M-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG 347
Query: 122 GVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWT 175
+ A + ++ + D I +T+L+DG+ K + A Q+ D + ++ ++ +
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 176 AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRS 235
+I GY + DD LELFR M+ G ++ T
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTY-------------------------- 441
Query: 236 REDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGEEA 292
N LI + + G ++ A+++F + + V++ ++ L +G E+A
Sbjct: 442 ---------NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 293 IELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMID 352
+E+FEK+ +E D Y ++ + V+ F + + ++P + Y MI
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPGVKTYNIMIG 551
Query: 353 LYGRAGLLQEA---FKFIENMPIEPD 375
+ G L EA F+ +E PD
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPD 577
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 166/406 (40%), Gaps = 46/406 (11%)
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGAS----LNHGKQIHASAI-RSREDLSIS 242
DDA++LFR M P P + + S ++ L KQ+ I + LSI
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 243 VGNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
+ N + K+ L + +T+++S++I L G EA+EL ++M+ +
Sbjct: 130 I-NCFCRCRKLCLAFSAMGKIIKL-GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAG---L 359
G +PD IT +++ G + + M + +P Y ++++ ++G L
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 360 LQEAFKFIENMPIEPDVIAW----------GSLLSSCKVYKNVDLAKIAAERLLLIEPDN 409
E + +E I+ D + + GSL ++ ++ +++ I N
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT---------N 297
Query: 410 SGAYSALANVYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQK 469
Y+ L + G+W+D AK+ + M +K++ + + + F E L +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDM----IKRKINPNVVTFSVLIDSFVKEGKLR-EA 352
Query: 470 DEIYKMMDKIWEEIKKLGFIPDTDSVLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTT 529
+E++K E+ G PDT + ++ K+ L ++ + + P T
Sbjct: 353 EELHK-------EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 530 LRIMKNLRIC--NDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFC 573
I+ N C N ++ K+ R ++ VT ++ GFC
Sbjct: 406 FNILIN-GYCKANRIDDGLELFRKMSLRGVVADTVT-YNTLIQGFC 449
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 197/432 (45%), Gaps = 25/432 (5%)
Query: 28 FQQMSERDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLEN 87
F++ S V ++ ++ Y + G K AL +F +M + + + EN
Sbjct: 148 FKEFSFSPTV-FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGEN 206
Query: 88 MNLGKQIHSYIIRTEFDISGAVQNA--LISMYAKTGGVEVARRVVEQSEIS---DLDAIA 142
+H Y F++S V +++ Y ++G V+ A +++E S +L+ +
Sbjct: 207 F---VALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 143 FTALLDGYAKLGDITPARQIFDSLR----NRDVVAWTAMIVGYVQNGLNDDALELFRAMT 198
+ +L++GYA +GD+ ++ + +R+VV +T++I GY + GL ++A +F +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 199 KEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSID 258
++ + ++ R + ++H + I + ++ N+LI Y K+G +
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 259 NAQKVFNLI---CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVL 315
A+++F+ + D ++++++ + G +EA++L ++M + P +TY +L
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 316 SACTHVGLVEQGRSYFNLM--ASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM--- 370
+ +G S + +M V+ E + S +++ + G EA K EN+
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCS---TLLEALFKLGDFNEAMKLWENVLAR 500
Query: 371 PIEPDVIAWGSLLSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALANVYSACGKWEDA 429
+ D I ++S CK+ K + +I + Y AL++ Y G ++A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 430 AKIRKLMNDRGV 441
+++ M +G+
Sbjct: 561 FAVKEYMERKGI 572
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 192/447 (42%), Gaps = 59/447 (13%)
Query: 5 ITSWNIMISLHMNSGRIDLALAQFQQMS-----ERDIVTWNSMIAGYNQHGFDKEALELF 59
+ + +I+++ + SG +D A+ ++ E ++VT+NS+I GY G D E +
Sbjct: 225 VFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG-DVEGMTRV 283
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
++ + + + T S LI Y K
Sbjct: 284 LRLMSERGVSRNVVTYTS-----------------------------------LIKGYCK 308
Query: 120 TGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVVAWT-- 175
G +E A V E + L D + L+DGY + G I A ++ D++ V T
Sbjct: 309 KGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTI 368
Query: 176 --AMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
++I GY ++G +A ++F M +P+ T ++ R ++ ++
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGE 290
+ ++ N L+ Y++ G+ + ++ ++ N D +S S+++ AL + G
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
EA++L+E +LA G+ D IT ++S + V + + + ++ + +P + Y +
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD-NVNIFRCKPAVQTYQAL 547
Query: 351 IDLYGRAGLLQEAF---KFIENMPIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEP 407
Y + G L+EAF +++E I P + + +L+S Y++ L K+A L+IE
Sbjct: 548 SHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRH--LNKVAD---LVIEL 602
Query: 408 DNSGAYSALANVYSACGKWEDAAKIRK 434
G +A + W + I K
Sbjct: 603 RARGLTPTVATYGALITGWCNIGMIDK 629
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 169/376 (44%), Gaps = 19/376 (5%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
++ ++N +I+ + G ++ + MSER ++VT+ S+I GY + G +EA +F
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
+L++ L D+ + + ++H +I + + N+LI+ Y K
Sbjct: 320 -ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCK 378
Query: 120 TGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNRDVV----A 173
+G + A ++ + L D + L+DGY + G + A ++ D + ++VV
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ ++ GY + G D L L++ M K G + + + +L + N ++ + +
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 234 RSREDLSISVG-NALITMYAKAGSIDNAQKVF---NLICWNNDTVSWSSMIIALAQHGLG 289
+R L+ ++ N +I+ K ++ A+++ N+ ++ ++ + G
Sbjct: 499 -ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNL 557
Query: 290 EEAIELFEKMLALGIEPDHITYVGVLS-ACTHVGLVEQGRSYFNLMASVHKIEPTLSHYA 348
+EA + E M GI P Y ++S A + L + L A + PT++ Y
Sbjct: 558 KEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRA--RGLTPTVATYG 615
Query: 349 CMIDLYGRAGLLQEAF 364
+I + G++ +A+
Sbjct: 616 ALITGWCNIGMIDKAY 631
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 152/370 (41%), Gaps = 39/370 (10%)
Query: 142 AFTALLDGYAKLGDITPARQIFDSLRNRDVVAWTAMIVGY----VQNGLNDDALELFRAM 197
F +L YA+ G + A +FD++ N + V+ G N AL ++ M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 198 TKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV--GNALITMYAKAG 255
P+ FT + +++ R +++ + A S L ++V N+LI YA G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKA-MVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 256 SIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYV 312
++ +V L+ + + V+++S+I + GL EEA +FE + + D Y
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 313 GVLSACTHVGLVEQG-RSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM- 370
++ G + R + N++ + T+ + +I+ Y ++G L EA + M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN--SLINGYCKSGQLVEAEQIFSRMN 393
Query: 371 --PIEPDVIAWGSLLSSCKVYKNVDLAKIAAERLLLIEP-DNSGAYSALANVYSACGKWE 427
++PD + +L+ VD A +++ E Y+ L YS G +
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 428 DAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMD-----KIWEE 482
D + K+M RGV + E S + ++K+ D K+WE
Sbjct: 454 DVLSLWKMMLKRGVNAD-----------------EISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 483 IKKLGFIPDT 492
+ G + DT
Sbjct: 497 VLARGLLTDT 506
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 37 VTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHS 96
+ +N IAG + G ++A +LFS +L PD++T + C ++N +
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN-----KA 774
Query: 97 YIIRTEFDISGAVQ-----NALISMYAKTGGVEVARRVVE---QSEISDLDAIAFTALLD 148
+ +R E + G + NALI K G V+ A+R++ Q I+ +AI + L+D
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITP-NAITYNTLID 833
Query: 149 GYAKLGDITPARQIFDSLRNRDVV 172
G K G++ A ++ + + + +V
Sbjct: 834 GLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 25/274 (9%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSERDI---VTWNSMIAGYNQHGFDK--EALEL 58
++ ++ +I+ N G ID A A +M E+ I V S IA + DK EA L
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIAN-SLFRLDKIDEACLL 668
Query: 59 FSSMLQDSSLKPDKFTLASTL--SACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISM 116
++ L P +L L SA T L+ + + + + + + V N I+
Sbjct: 669 LQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAG 728
Query: 117 YAKTGGVEVARRVVEQSEISDL---DAIAFTALLDGYAKLGDITPARQIFDSLRNR---- 169
K G +E AR++ SD D +T L+ G A GDI A + D + +
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP 788
Query: 170 DVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIH 229
++V + A+I G + G D A L + ++G PN+ T ++ + ++
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV------- 841
Query: 230 ASAIRSREDLSISVGNALITMYAKAGSIDNAQKV 263
A A+R +E + + L+ K G +D ++V
Sbjct: 842 AEAMRLKEKM---IEKGLVRGSDKQGDVDIPKEV 872
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 185/397 (46%), Gaps = 18/397 (4%)
Query: 4 SITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALELF 59
SI + + +++ + + RI A+A QM E D +T+ ++I G H EA+ L
Sbjct: 78 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 137
Query: 60 SSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAK 119
M+Q +P+ T ++ +++L + + + + + + N +I K
Sbjct: 138 DRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
Query: 120 TGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLR----NRDVVA 173
V+ A + ++ E + + + +++L+ G + A Q+ + N ++V
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Query: 174 WTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAI 233
+ A+I +V+ G +A +L M K P+ FT ++++ L+ KQ+ +
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316
Query: 234 RSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN---DTVSWSSMIIALAQHGLGE 290
+ N LI + K+ +++ ++F + DTV+++++I L G +
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376
Query: 291 EAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACM 350
A ++F++M++ G+ PD +TY +L + G +E+ F+ M +I+ + Y M
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYTTM 435
Query: 351 IDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLS 384
I+ +AG + + + ++ ++P+V+ + +++S
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 472
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 173/403 (42%), Gaps = 36/403 (8%)
Query: 188 DDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNH--GKQIHASAIRSREDLSISVGN 245
DDA+ LF M K P P+ F +LS ++ + + ++ + SI +
Sbjct: 24 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLS 83
Query: 246 ALITMYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLAL 302
+L+ Y I +A + + + + DT++++++I L H EA+ L ++M+
Sbjct: 84 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 143
Query: 303 GIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQE 362
G +P+ +TY V++ G ++ + N M + KIE + + +ID + + +
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDD 202
Query: 363 A---FKFIENMPIEPDVIAWGSLLSS-CKVYKNVDLAKIAAERLLLIEPDNSGAYSALAN 418
A FK +E I P+V+ + SL+S C + D +++ ++ + N ++AL +
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262
Query: 419 VYSACGKWEDAAKIRKLMNDRGVKKEQGSSWLEIQNEVHIFGAEDSLHPQKDEIYKMMDK 478
+ GK+ +A K ++D +K+ + ++ F D L K +
Sbjct: 263 AFVKEGKFVEAEK----LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK--------Q 310
Query: 479 IWEEIKKLGFIPDTDS-------VLHDLEIEVKDKLLRYHSEKLAIAFGIISTPENTTLR 531
++E + PD D+ +E +L R S + + T TTL
Sbjct: 311 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG----DTVTYTTL- 365
Query: 532 IMKNLRICNDCHTAIKFISKLMGREIIVRDVTRFHHFKDGFCS 574
++ L DC A K + K M + + D+ + DG C+
Sbjct: 366 -IQGLFHDGDCDNAQK-VFKQMVSDGVPPDIMTYSILLDGLCN 406
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 17/345 (4%)
Query: 38 TWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSY 97
TWN+M+A G DK +F M + +PD+ T + +SA + +++
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 98 IIRTEFDISGAVQNALISMYAKTGGVEVARRVVE--QSEISDLDAIAFTALLDGYAKLGD 155
+ R F+ NAL++ A+ G V+ +S+ +++ +L YAK G+
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 156 ITPARQIFDSLRNRDVV-AW----TAMIVGYVQNGL--NDDALELFRAMTKEGPRPNSFT 208
+I + ++ + +W T ++ + L ++ A LF+ K G +P+
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK---KHGYKPDMVI 633
Query: 209 LAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI- 267
+MLS+ +R + + I S + N+L+ MY + G A+++ +
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 268 --CWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVE 325
D VS++++I + GL +EA+ + +M GI P TY +S T +G+
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 326 QGRSYFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENM 370
+ MA + P + ++D Y RAG EA F+ +
Sbjct: 754 EIEDVIECMAK-NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 171/371 (46%), Gaps = 16/371 (4%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFD-KEAL 56
L + ++ ++ + +G+ + A+ F++M E +VT+N ++ + + G ++ L
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKIL 266
Query: 57 ELFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISM 116
+ M + LK D+FT ++ LSAC + K+ + + ++ NAL+ +
Sbjct: 267 GVLDEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 117 YAKTGGVEVARRVVEQSEISDL--DAIAFTALLDGYAKLGDITPARQIFDSLRNRDV--- 171
+ K G A V+++ E + D++ + L+ Y + G A + + + + V
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 172 -VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHA 230
+ +T +I Y + G D+AL+LF +M + G PN+ T A+LS+ + + N ++
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 231 SAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLI--C-WNNDTVSWSSMIIALAQHG 287
+ + + N ++ + G +VF + C + D +++++I A + G
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 288 LGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEPTLSHY 347
+A +++ +M G TY +L+A G G + + M S +PT + Y
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS-KGFKPTETSY 564
Query: 348 ACMIDLYGRAG 358
+ M+ Y + G
Sbjct: 565 SLMLQCYAKGG 575
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 161/357 (45%), Gaps = 25/357 (7%)
Query: 106 SGAVQ--NALISMYAKTGGVE----VARRVVEQSEISD--LDAIAFTALLDGYAKLGDIT 157
SGA++ + +I ++ + G E VA +++++ + + LD A+T +L Y++ G
Sbjct: 168 SGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYE 227
Query: 158 PARQIFDSLR----NRDVVAWTAMIVGYVQNGLN-DDALELFRAMTKEGPRPNSFTLAAM 212
A +F+ ++ + +V + ++ + + G + L + M +G + + FT + +
Sbjct: 228 KAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTV 287
Query: 213 LSVSSRGASLNHGKQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFNLICWNN- 271
LS +R L K+ A + NAL+ ++ KAG A V + N+
Sbjct: 288 LSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSC 347
Query: 272 --DTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRS 329
D+V+++ ++ A + G +EA + E M G+ P+ ITY V+ A G ++
Sbjct: 348 PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 330 YFNLMASVHKIEPTLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLLSSC 386
F M + P Y ++ L G+ E K + +M P+ W ++L+ C
Sbjct: 408 LFYSMKEAGCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Query: 387 KVYKNVD--LAKIAAE-RLLLIEPDNSGAYSALANVYSACGKWEDAAKIRKLMNDRG 440
K +D + ++ E + EPD ++ L + Y CG DA+K+ M G
Sbjct: 467 G-NKGMDKFVNRVFREMKSCGFEPDRD-TFNTLISAYGRCGSEVDASKMYGEMTRAG 521
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 162/344 (47%), Gaps = 18/344 (5%)
Query: 54 EALELFSSMLQDSSLKPDKFTLASTLSACTNLEN----MNLGKQIHSYIIRTEFDISGAV 109
+A++LFS M++ P LSA L+ ++LGK++ IR + V
Sbjct: 68 DAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 110 QNALISMYAKTGGVEVARRVVEQSEISDLDAIAFTALLDGYAKLGDITPARQIFDSL--- 166
N + + + + ++++ + D + +L++G+ + ++ A + D +
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLG--YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 167 -RNRDVVAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHG 225
D+VA+ A+I + +DA + F+ + ++G RPN T A+++ + +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 226 KQIHASAIRSREDLSISVGNALITMYAKAGSIDNAQKVFN---LICWNNDTVSWSSMIIA 282
++ + I+ + ++ +AL+ + K G + A+++F + + D V++SS+I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 283 LAQHGLGEEAIELFEKMLALGIEPDHITYVGVLSACTHVGLVEQGRSYFNLMASVHKIEP 342
L H +EA ++F+ M++ G D ++Y +++ VE G F M+ +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 343 TLSHYACMIDLYGRAGLLQEAFKFIENMP---IEPDVIAWGSLL 383
T++ Y +I + +AG + +A +F M I PD+ + LL
Sbjct: 365 TVT-YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 154/328 (46%), Gaps = 14/328 (4%)
Query: 20 RIDLALAQFQQMSE----RDIVTWNSMIAGYNQHGFDKEALELFSSMLQDSSLKPDKFTL 75
R+ A++ +M E DIV +N++I + +A + F ++ ++P+ T
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTY 228
Query: 76 ASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMYAKTGGVEVARRVVEQ-SE 134
+ ++ N + ++ S +I+ + + +AL+ + K G V A+ + E+
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 135 IS-DLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DVVAWTAMIVGYVQNGLNDD 189
+S D D + +++L++G I A Q+FD + ++ DVV++ +I G+ + +D
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 190 ALELFRAMTKEGPRPNSFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISVGNALIT 249
++LFR M++ G N+ T ++ + ++ ++ + I N L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 250 MYAKAGSIDNAQKVFNLIC---WNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALGIEP 306
G ++ A +F + + D V+++++I + + G EEA LF + G++P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 307 DHITYVGVLSACTHVGLVEQGRSYFNLM 334
D +TY ++S GL+ + + + M
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 2 LRSITSWNIMISLHMNSGRIDLALAQFQQMSER----DIVTWNSMIAGYNQHGFDKEALE 57
L + S+N +I+ + R++ + F++MS+R + VT+N++I G+ Q G +A E
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 58 LFSSMLQDSSLKPDKFTLASTLSACTNLENMNLGKQIHSYIIRTEFDISGAVQNALISMY 117
FS M + PD +T N L+
Sbjct: 387 FFSQM-DFFGISPDIWT-----------------------------------YNILLGGL 410
Query: 118 AKTGGVEVARRVVE--QSEISDLDAIAFTALLDGYAKLGDITPARQIFDSLRNR----DV 171
G +E A + E Q DLD + +T ++ G K G + A +F SL + D+
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 172 VAWTAMIVGYVQNGLNDDALELFRAMTKEGPRPNSFTLA 210
V +T M+ G GL + L+ M +EG N TL+
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 126/298 (42%), Gaps = 47/298 (15%)
Query: 188 DDALELFRAMTKEGPRPN----SFTLAAMLSVSSRGASLNHGKQIHASAIRSREDLSISV 243
+DA++LF M K P P+ + L+A++ + ++ GK++ IR+ V
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 244 GNALITMYAKAGSIDNAQKVFNLICWNNDTVSWSSMIIALAQHGLGEEAIELFEKMLALG 303
N + + ++ K+ L + D V+ S++ + +A+ L +KM+ +G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKL-GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 304 IEPDHITYVGVLSACTHVGLVEQGRSYFN------------------------------- 332
+PD + Y ++ + V +F
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 333 -LMASV--HKIEPTLSHYACMIDLYGRAGLLQEAFKFIE---NMPIEPDVIAWGSLLSSC 386
L++ + KI P + Y+ ++D + + G + EA + E M I+PD++ + SL++
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 387 KVYKNVDLAKIAAERLLLIEPD---NSGAYSALANVYSACGKWEDAAKIRKLMNDRGV 441
++ +D A + L++ + +Y+ L N + + ED K+ + M+ RG+
Sbjct: 306 CLHDRIDEANQMFD--LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361