Jatropha Genome Database

JcCA0127751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0127751.10 - phase: 0 /partial
         (166 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33670.1 | Symbols:  | L-galactose dehydrogenase (L-GalDH) | ...   280   4e-76

>AT4G33670.1 | Symbols:  | L-galactose dehydrogenase (L-GalDH) |
           chr4:16169670-16171446 REVERSE
          Length = 319

 Score =  280 bits (715), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 148/166 (89%)

Query: 1   IGITGLPLGIFTYVLDRVPPGTVDVILSYCHYSINDSTLLDILPYLKSKGVGIISASPLA 60
           IGITGLPL IFTYVLDRVPPGTVDVILSYCHY +NDSTLLD+LPYLKSKGVG+ISASPLA
Sbjct: 154 IGITGLPLDIFTYVLDRVPPGTVDVILSYCHYGVNDSTLLDLLPYLKSKGVGVISASPLA 213

Query: 61  MGLLTENGPPEWHPASPELKSACQAAAAYCKEKGKNISKLAMQYSLSNKDISTVLVGMNS 120
           MGLLTE GPPEWHPASPELKSA +AA A+CK KGK I+KLA+QYSL+NK+IS+VLVGM+S
Sbjct: 214 MGLLTEQGPPEWHPASPELKSASKAAVAHCKSKGKKITKLALQYSLANKEISSVLVGMSS 273

Query: 121 VRQVEENVTAAIELATFGKDQQTLAEIEAIVSPVKNQTWPSGIQHS 166
           V QVEENV A  EL + G DQ+TL+E+EAI+ PVKN TWPSGI  +
Sbjct: 274 VSQVEENVAAVTELESLGMDQETLSEVEAILEPVKNLTWPSGIHQN 319