Jatropha Genome Database

JcCA0126401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0126401.10 + phase: 0 /pseudo
         (286 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17550.1 | Symbols: HAB2 | HAB2; catalytic/ protein serine/th...   185   3e-47
AT1G72770.2 | Symbols: HAB1 | HAB1 (HOMOLOGY TO ABI1); catalytic...   172   2e-43
AT1G72770.1 | Symbols: HAB1 | HAB1 (HOMOLOGY TO ABI1); catalytic...   172   3e-43
AT5G57050.1 | Symbols: ABI2 | ABI2 (ABA INSENSITIVE 2); protein ...   109   2e-24
AT5G57050.2 | Symbols: ABI2 | ABI2 (ABA INSENSITIVE 2); protein ...   108   4e-24
AT4G26080.1 | Symbols: ABI1 | ABI1 (ABA INSENSITIVE 1); calcium ...    85   6e-17
AT1G07430.1 | Symbols:  | protein phosphatase 2C, putative / PP2...    56   3e-08

>AT1G17550.1 | Symbols: HAB2 | HAB2; catalytic/ protein
           serine/threonine phosphatase | chr1:6034917-6036939
           FORWARD
          Length = 511

 Score =  185 bits (470), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/276 (41%), Positives = 170/276 (61%), Gaps = 29/276 (10%)

Query: 1   MSPAVAMTLSLGNSICDNSGIATHVEITRLKLVTDAVSLLSDPAKVVSDEAVAVC-SGSS 59
           +SPAVA+TL L N++CD SGI++  +I+ L+ VTDA  +L +  +      V  C  GS 
Sbjct: 4   ISPAVALTLGLANTMCD-SGISSTFDISELENVTDAADMLCNQKRQRYSNGVVDCIMGSV 62

Query: 60  DDAKNGMEFTTLSESKDGGVGGNDSVPTDAMIQXXXXXXXXXXXXXTNGTISXXXXXXXX 119
            + K   E  +LS   D  V   +S   + ++                  IS        
Sbjct: 63  SEEKTLSEVRSLS--SDFSVTVQESEEDEPLVSDAT-------------IISEGLIVVDA 107

Query: 120 GSEINLPKSVEIEDMIEDSQIIAKAIIVESSNEVQVPTAKLLIAAVSPNADITDGSELRA 179
            SEI+LP +VE ++     +++A AII+  +   QVPTA++LIA+++ + ++    E+  
Sbjct: 108 RSEISLPDTVETDN----GRVLATAIILNETTIEQVPTAEVLIASLNHDVNM----EVAT 159

Query: 180 SAVVLKLPSES-NLSKGTSRSVFEIDCVPLWGSVSICGRRPEMEDSLAAVPRFAKIPIKM 238
           S VV++LP E+ N+++G SRSV+E++C+PLWG++SICG R EMED++ A+P F KIPIKM
Sbjct: 160 SEVVIRLPEENPNVARG-SRSVYELECIPLWGTISICGGRSEMEDAVRALPHFLKIPIKM 218

Query: 239 LIGDHVVNGLNESLTHLTSHFFGVYDGHGGAQVHLY 274
           L+GDH   G++ SL +LTSHFFGVYDGHGGAQV  Y
Sbjct: 219 LMGDH--EGMSPSLPYLTSHFFGVYDGHGGAQVADY 252


>AT1G72770.2 | Symbols: HAB1 | HAB1 (HOMOLOGY TO ABI1); catalytic/
           protein serine/threonine phosphatase |
           chr1:27390998-27392413 FORWARD
          Length = 406

 Score =  172 bits (436), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/287 (41%), Positives = 167/287 (58%), Gaps = 50/287 (17%)

Query: 1   MSPAVAMTLSLG-NSICDNSGIATHVEITRLKLVTDAVSLLSDPAKVVSDEAVAVCSGSS 59
           M+PAVAMTLSL  N++C++S     VEIT+LK VTDA  LLSD       E  + C+G +
Sbjct: 4   MTPAVAMTLSLAANTMCESSP----VEITQLKNVTDAADLLSDS------ENQSFCNGGT 53

Query: 60  D----DAKNGME------FTTLSESKDGGVGGNDSVPTDAMIQXXXXXXXXXXXXXTNGT 109
           +    D     E        TLS+++ G     D     ++++              +  
Sbjct: 54  ECTMEDVSELEEVGEQDLLKTLSDTRSGSSNVFDEDDVLSVVED------------NSAV 101

Query: 110 ISXXXXXXXXGSEINLPKSVEIEDMIEDSQIIAKAIIVESSNEVQVPTAKLLIAAVSPNA 169
           IS        GSE++L  +  +E  I++ +++A AIIV  S+  QVPTA++LIA V+ + 
Sbjct: 102 ISEGLLVVDAGSELSLSNTA-ME--IDNGRVLATAIIVGESSIEQVPTAEVLIAGVNQDT 158

Query: 170 DITDGSELRASAVVLKLPSES--NLSKGTSRSVFEIDCVPLWGSVSICGRRPEMEDSLAA 227
           +         S VV++LP E+  +L KG  RSV+E+DC+PLWG+VSI G R EMED+ A 
Sbjct: 159 N--------TSEVVIRLPDENSNHLVKG--RSVYELDCIPLWGTVSIQGNRSEMEDAFAV 208

Query: 228 VPRFAKIPIKMLIGDHVVNGLNESLTHLTSHFFGVYDGHGGAQVHLY 274
            P F K+PIKML+GDH   G++ SLTHLT HFFGVYDGHGG +V  Y
Sbjct: 209 SPHFLKLPIKMLMGDH--EGMSPSLTHLTGHFFGVYDGHGGHKVADY 253


>AT1G72770.1 | Symbols: HAB1 | HAB1 (HOMOLOGY TO ABI1); catalytic/
           protein serine/threonine phosphatase |
           chr1:27390998-27392851 FORWARD
          Length = 511

 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/282 (42%), Positives = 163/282 (57%), Gaps = 40/282 (14%)

Query: 1   MSPAVAMTLSLG-NSICDNSGIATHVEITRLKLVTDAVSLLSDPAKVVSDEAVAVCSGSS 59
           M+PAVAMTLSL  N++C++S     VEIT+LK VTDA  LLSD       E  + C+G  
Sbjct: 4   MTPAVAMTLSLAANTMCESS----PVEITQLKNVTDAADLLSDS------ENQSFCNG-- 51

Query: 60  DDAKNGMEFTTLSESKDGGVGGNDSVPTDAMIQXXXXXX-----XXXXXXXTNGTISXXX 114
                G E T    S+   VG  D + T +  +                   +  IS   
Sbjct: 52  -----GTECTMEDVSELEEVGEQDLLKTLSDTRSGSSNVFDEDDVLSVVEDNSAVISEGL 106

Query: 115 XXXXXGSEINLPKSVEIEDMIEDSQIIAKAIIVESSNEVQVPTAKLLIAAVSPNADITDG 174
                GSE++L  +  +E  I++ +++A AIIV  S+  QVPTA++LIA V+ + +    
Sbjct: 107 LVVDAGSELSLSNTA-ME--IDNGRVLATAIIVGESSIEQVPTAEVLIAGVNQDTN---- 159

Query: 175 SELRASAVVLKLPSES--NLSKGTSRSVFEIDCVPLWGSVSICGRRPEMEDSLAAVPRFA 232
                S VV++LP E+  +L KG  RSV+E+DC+PLWG+VSI G R EMED+ A  P F 
Sbjct: 160 ----TSEVVIRLPDENSNHLVKG--RSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFL 213

Query: 233 KIPIKMLIGDHVVNGLNESLTHLTSHFFGVYDGHGGAQVHLY 274
           K+PIKML+GDH   G++ SLTHLT HFFGVYDGHGG +V  Y
Sbjct: 214 KLPIKMLMGDH--EGMSPSLTHLTGHFFGVYDGHGGHKVADY 253


>AT5G57050.1 | Symbols: ABI2 | ABI2 (ABA INSENSITIVE 2); protein
           serine/threonine phosphatase | chr5:23087720-23089303
           FORWARD
          Length = 423

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)

Query: 192 LSKGTSRSVFEIDCVPLWGSVSICGRRPEMEDSLAAVPRFAKIPIKMLIGDHVVNGLNES 251
           LS+  SRS+FE  CVPL+G  SICGRRPEMEDS++ +PRF ++    L+   V NG N  
Sbjct: 96  LSRTESRSLFEFKCVPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFN-- 153

Query: 252 LTHLTSHFFGVYDGHGGAQVHLY 274
             HL++HFFGVYDGHGG+QV  Y
Sbjct: 154 -PHLSAHFFGVYDGHGGSQVANY 175


>AT5G57050.2 | Symbols: ABI2 | ABI2 (ABA INSENSITIVE 2); protein
           serine/threonine phosphatase | chr5:23087720-23089303
           FORWARD
          Length = 383

 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)

Query: 192 LSKGTSRSVFEIDCVPLWGSVSICGRRPEMEDSLAAVPRFAKIPIKMLIGDHVVNGLNES 251
           LS+  SRS+FE  CVPL+G  SICGRRPEMEDS++ +PRF ++    L+   V NG N  
Sbjct: 56  LSRTESRSLFEFKCVPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFN-- 113

Query: 252 LTHLTSHFFGVYDGHGGAQVHLY 274
             HL++HFFGVYDGHGG+QV  Y
Sbjct: 114 -PHLSAHFFGVYDGHGGSQVANY 135


>AT4G26080.1 | Symbols: ABI1 | ABI1 (ABA INSENSITIVE 1); calcium ion
           binding / protein serine/threonine phosphatase |
           chr4:13220231-13221828 REVERSE
          Length = 434

 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 12/106 (11%)

Query: 170 DITDGSELRASAVVLKLPSESNL-SKGTSRSVFEIDCVPLWGSVSICGRRPEMEDSLAAV 228
           DI+ G E+  S +     SE  + S+  SRS+FE   VPL+G  SICGRRPEMED+++ +
Sbjct: 93  DISAGDEINGSDIT----SEKKMISRTESRSLFEFKSVPLYGFTSICGRRPEMEDAVSTI 148

Query: 229 PRFAKIPIKMLIGDHVVNGLNESLTHLTSHFFGVYDGHGGAQVHLY 274
           PRF +          +++G  +  +   +HFFGVYDGHGG+QV  Y
Sbjct: 149 PRFLQSS-----SGSMLDGRFDPQS--AAHFFGVYDGHGGSQVANY 187


>AT1G07430.1 | Symbols:  | protein phosphatase 2C, putative / PP2C,
           putative | chr1:2281151-2282656 REVERSE
          Length = 442

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 14/76 (18%)

Query: 196 TSRSVFEIDCVPLWGSVSICGRRPEMEDSLAAVPRFAKIPIKMLIGDHVVNGLNESLTHL 255
           + ++V E D  P +G  S+CGRR +MED++A  P F +   +               +  
Sbjct: 108 SKKTVKETDLRPRYGVASVCGRRRDMEDAVALHPSFVRKQTE--------------FSRT 153

Query: 256 TSHFFGVYDGHGGAQV 271
             H+FGVYDGHG + V
Sbjct: 154 RWHYFGVYDGHGCSHV 169