Jatropha Genome Database

JcCA0122211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0122211.10 - phase: 0 
         (318 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41540.3 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding / gl...   527   e-150
AT2G41540.2 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding / gl...   527   e-150
AT2G41540.1 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding / gl...   527   e-150
AT3G07690.1 | Symbols:  | NAD or NADH binding / binding / cataly...   480   e-136

>AT2G41540.3 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding /
           glycerol-3-phosphate dehydrogenase (NAD+) |
           chr2:17326801-17328654 FORWARD
          Length = 462

 Score =  527 bits (1357), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 256/313 (81%), Positives = 276/313 (88%), Gaps = 2/313 (0%)

Query: 1   MVGSIEAMNVHQNGWSIQH-GNCLEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAAL 59
           MVGSIEA ++  NG S+ H G  LEEKLDEFR LLGK++ DPLRIV VGAGAWGSVFAAL
Sbjct: 1   MVGSIEAKSLQSNG-SVHHIGLNLEEKLDEFRRLLGKSEKDPLRIVSVGAGAWGSVFAAL 59

Query: 60  LQDSYGQFREKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 119
           LQ+SYG FR+K QIRIWRR GRAVDR TAEHLFEVINSRED+LRRLIRRCAYLKYVEARL
Sbjct: 60  LQESYGGFRDKFQIRIWRRAGRAVDRETAEHLFEVINSREDILRRLIRRCAYLKYVEARL 119

Query: 120 GDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIG 179
           GDRTL+ADEILKDGFCLNM+DTPLCPLKVVTNLQEAVWDADIVVNG+PSTET EVFEEI 
Sbjct: 120 GDRTLYADEILKDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEIS 179

Query: 180 HYWKERITVPIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIY 239
            YWKERITVPIIISL+KGIE ALEPVPHIITPT+MI++ATG+ ++N+LYLGGPNIA+EIY
Sbjct: 180 KYWKERITVPIIISLSKGIETALEPVPHIITPTKMIHQATGVPIDNVLYLGGPNIAAEIY 239

Query: 240 NKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFL 299
           NKEYANARICGA KWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAG      
Sbjct: 240 NKEYANARICGAAKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALT 299

Query: 300 AHIDYCSMAYFQH 312
                    YF H
Sbjct: 300 NESATSKSVYFAH 312


>AT2G41540.2 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding /
           glycerol-3-phosphate dehydrogenase (NAD+) |
           chr2:17326801-17328654 FORWARD
          Length = 462

 Score =  527 bits (1357), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 256/313 (81%), Positives = 276/313 (88%), Gaps = 2/313 (0%)

Query: 1   MVGSIEAMNVHQNGWSIQH-GNCLEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAAL 59
           MVGSIEA ++  NG S+ H G  LEEKLDEFR LLGK++ DPLRIV VGAGAWGSVFAAL
Sbjct: 1   MVGSIEAKSLQSNG-SVHHIGLNLEEKLDEFRRLLGKSEKDPLRIVSVGAGAWGSVFAAL 59

Query: 60  LQDSYGQFREKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 119
           LQ+SYG FR+K QIRIWRR GRAVDR TAEHLFEVINSRED+LRRLIRRCAYLKYVEARL
Sbjct: 60  LQESYGGFRDKFQIRIWRRAGRAVDRETAEHLFEVINSREDILRRLIRRCAYLKYVEARL 119

Query: 120 GDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIG 179
           GDRTL+ADEILKDGFCLNM+DTPLCPLKVVTNLQEAVWDADIVVNG+PSTET EVFEEI 
Sbjct: 120 GDRTLYADEILKDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEIS 179

Query: 180 HYWKERITVPIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIY 239
            YWKERITVPIIISL+KGIE ALEPVPHIITPT+MI++ATG+ ++N+LYLGGPNIA+EIY
Sbjct: 180 KYWKERITVPIIISLSKGIETALEPVPHIITPTKMIHQATGVPIDNVLYLGGPNIAAEIY 239

Query: 240 NKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFL 299
           NKEYANARICGA KWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAG      
Sbjct: 240 NKEYANARICGAAKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALT 299

Query: 300 AHIDYCSMAYFQH 312
                    YF H
Sbjct: 300 NESATSKSVYFAH 312


>AT2G41540.1 | Symbols: GPDHC1 | GPDHC1; NAD or NADH binding /
           glycerol-3-phosphate dehydrogenase (NAD+) |
           chr2:17326801-17328654 FORWARD
          Length = 462

 Score =  527 bits (1357), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 256/313 (81%), Positives = 276/313 (88%), Gaps = 2/313 (0%)

Query: 1   MVGSIEAMNVHQNGWSIQH-GNCLEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAAL 59
           MVGSIEA ++  NG S+ H G  LEEKLDEFR LLGK++ DPLRIV VGAGAWGSVFAAL
Sbjct: 1   MVGSIEAKSLQSNG-SVHHIGLNLEEKLDEFRRLLGKSEKDPLRIVSVGAGAWGSVFAAL 59

Query: 60  LQDSYGQFREKVQIRIWRRPGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 119
           LQ+SYG FR+K QIRIWRR GRAVDR TAEHLFEVINSRED+LRRLIRRCAYLKYVEARL
Sbjct: 60  LQESYGGFRDKFQIRIWRRAGRAVDRETAEHLFEVINSREDILRRLIRRCAYLKYVEARL 119

Query: 120 GDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIG 179
           GDRTL+ADEILKDGFCLNM+DTPLCPLKVVTNLQEAVWDADIVVNG+PSTET EVFEEI 
Sbjct: 120 GDRTLYADEILKDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEIS 179

Query: 180 HYWKERITVPIIISLAKGIEAALEPVPHIITPTQMINRATGINMENILYLGGPNIASEIY 239
            YWKERITVPIIISL+KGIE ALEPVPHIITPT+MI++ATG+ ++N+LYLGGPNIA+EIY
Sbjct: 180 KYWKERITVPIIISLSKGIETALEPVPHIITPTKMIHQATGVPIDNVLYLGGPNIAAEIY 239

Query: 240 NKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFL 299
           NKEYANARICGA KWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAG      
Sbjct: 240 NKEYANARICGAAKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALT 299

Query: 300 AHIDYCSMAYFQH 312
                    YF H
Sbjct: 300 NESATSKSVYFAH 312


>AT3G07690.1 | Symbols:  | NAD or NADH binding / binding /
           catalytic/ coenzyme binding / glycerol-3-phosphate
           dehydrogenase (NAD+)/ oxidoreductase/ oxidoreductase,
           acting on CH-OH group of donors / oxidoreductase, acting
           on the CH-OH group of donors, NAD or NADP as acceptor |
           chr3:2457232-2459378 FORWARD
          Length = 466

 Score =  480 bits (1236), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 224/277 (80%), Positives = 251/277 (90%)

Query: 23  LEEKLDEFRCLLGKADGDPLRIVGVGAGAWGSVFAALLQDSYGQFREKVQIRIWRRPGRA 82
           +EE+LDE R ++GKAD DPLRIVGVGAGAWGSVF A+LQ++YG+FR KV +RIWRR GRA
Sbjct: 16  VEERLDEIRRVMGKADDDPLRIVGVGAGAWGSVFIAMLQENYGKFRGKVSVRIWRRGGRA 75

Query: 83  VDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTP 142
           +D+ATAEHLFEVINSRE++LRRLIRRCAYLKYVEARLGDR L+ADEILKDGFCLNMI+TP
Sbjct: 76  IDKATAEHLFEVINSREELLRRLIRRCAYLKYVEARLGDRVLYADEILKDGFCLNMIETP 135

Query: 143 LCPLKVVTNLQEAVWDADIVVNGVPSTETCEVFEEIGHYWKERITVPIIISLAKGIEAAL 202
           LCPLKVVTNLQEAVWDADIV+NG+PSTET +VF EI  YWKER+  P+IISLAKG+EA  
Sbjct: 136 LCPLKVVTNLQEAVWDADIVINGLPSTETFQVFNEISKYWKERVNAPVIISLAKGVEAEF 195

Query: 203 EPVPHIITPTQMINRATGINMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFL 262
           EP P I+TPTQMI+RATGI +ENILYLGGPNIASE+YNKEYANARICG+EKWRKPL KFL
Sbjct: 196 EPHPRIVTPTQMIHRATGIPLENILYLGGPNIASEVYNKEYANARICGSEKWRKPLGKFL 255

Query: 263 RQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGKFFYFL 299
           RQ HFIVWDNSDL+THEVMGGLKNVYAIGA     FL
Sbjct: 256 RQSHFIVWDNSDLITHEVMGGLKNVYAIGAVFVLAFL 292