Jatropha Genome Database
- JcCA0121401.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0121401.10 - phase: 0 /partial
(347 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 276 1e-74
AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 270 7e-73
AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 270 7e-73
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 266 1e-71
AT2G31215.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 76 3e-14
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 65 9e-11
AT5G46760.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 64 2e-10
AT2G46510.1 | Symbols: ATAIB | ATAIB (ABA-INDUCIBLE BHLH-TYPE TR... 62 7e-10
AT4G17880.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 62 8e-10
AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA binding / transcrip... 61 1e-09
AT1G12860.1 | Symbols: SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA bindi... 60 2e-09
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 60 2e-09
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 60 2e-09
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 60 2e-09
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 60 3e-09
AT2G16910.1 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA bind... 58 9e-09
AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 57 2e-08
AT4G09820.1 | Symbols: TT8 | TT8 (TRANSPARENT TESTA 8); DNA bind... 56 3e-08
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 56 4e-08
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 56 4e-08
AT5G65640.1 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); ... 55 6e-08
AT3G06120.1 | Symbols: MUTE | MUTE (MUTE); DNA binding / transcr... 55 7e-08
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 55 7e-08
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 55 8e-08
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29 |... 55 1e-07
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) family p... 54 1e-07
AT5G46690.1 | Symbols: bHLH071 | bHLH071 (beta HLH protein 71); ... 54 1e-07
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF G... 54 2e-07
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF G... 54 2e-07
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 53 3e-07
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 53 3e-07
AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 53 3e-07
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 52 5e-07
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 52 6e-07
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 52 6e-07
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) family p... 52 7e-07
AT5G41315.1 | Symbols: GL3, MYC6.2 | GL3 (GLABROUS 3); protein b... 50 2e-06
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 50 2e-06
AT5G65640.2 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); ... 50 3e-06
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 49 4e-06
AT4G38070.1 | Symbols: | bHLH family protein | chr4:17876535-17... 49 5e-06
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:13296655-13298139 FORWARD
Length = 428
Score = 276 bits (706), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/323 (47%), Positives = 203/323 (62%), Gaps = 46/323 (14%)
Query: 47 LPMTDTASASSILYDPLFHLNLPPQPPLFRDLFQSLPPHGYSLPGSRGSSLFGGVGDDHV 106
LP +D + S YDPLFHLNLPPQPPL +P + S G+ +
Sbjct: 130 LPSSDIMAGSCFTYDPLFHLNLPPQPPL--------------IPSNDYSGYLLGIDTNTT 175
Query: 107 EGSGGVNLYQEGDGEQQFDNGVLDFTWDMACMGNGRQGGNIKHFATERQRRQHIKDKYDD 166
N+ E + QFD+G+++F+ ++ G G++ K F TER+RR H+ ++Y+
Sbjct: 176 TQRDESNVGDENNN-AQFDSGIIEFSKEIRRKGRGKRKN--KPFTTERERRCHLNERYEA 232
Query: 167 LRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKRCARERGKRQKIEEDS--- 223
L+ L+P+PSK DRAS++ D I+YI EL R V+ELK LVE+KRC G R K E
Sbjct: 233 LKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERKRC----GGRHKNNEVDDNN 288
Query: 224 -------------------IGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRII 264
+ ES ++D Q +N SLR WLQRKSK TEVDVRI+
Sbjct: 289 NNKNLDDHGNEDDDDDDENMEKKPESDVID---QCSSNNSLRCSWLQRKSKVTEVDVRIV 345
Query: 265 DDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIYEGSSVYAS 324
DDEVTIK+VQ+KKINCLL VSKVLD+LQLDLHHVAGG +G++YSFLFN+KIYEGS++YAS
Sbjct: 346 DDEVTIKVVQKKKINCLLLVSKVLDQLQLDLHHVAGGQIGEHYSFLFNTKIYEGSTIYAS 405
Query: 325 AIANKLIEVVDRQYASTPSTSCY 347
AIAN++IEVVD+ Y ++ S Y
Sbjct: 406 AIANRVIEVVDKHYMASLPNSNY 428
>AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:1885146-1886564 REVERSE
Length = 420
Score = 270 bits (691), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/335 (47%), Positives = 211/335 (62%), Gaps = 58/335 (17%)
Query: 35 PNHTTP--LSF---------------VGDLPMTDTASASSILYDPLFHLNLPPQPPLFRD 77
PNHTTP LS + D+ MT ++S ++ YDPLFHLN P QPP
Sbjct: 119 PNHTTPDLLSLLQLPRSSLPPFANPSIQDIIMTTSSSVAA--YDPLFHLNFPLQPP---- 172
Query: 78 LFQSLPPHGYSLPGSRGSSLFGGVGDDHVEGSGGVNLYQEGDGEQQFDNGVLDFTWDMAC 137
GS F GV D E + GVNL + + D+G+
Sbjct: 173 ---------------NGS--FMGVDQDQTETNQGVNLMYDEEN-NNLDDGL--------- 205
Query: 138 MGNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTV 197
GR K F TER+RR H KD++ DL+NL+PNP+KNDRAS+VG+AI+YIKELLRT+
Sbjct: 206 NRKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTI 265
Query: 198 NELKILVEKKRCA-RERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKD 256
+E K+LVEKKR R R ++E+ +S++V+ + N +LR WL+RKSK
Sbjct: 266 DEFKLLVEKKRVKQRNREGDDVVDENFKA---QSEVVEQCLINKKNNALRCSWLKRKSKF 322
Query: 257 TEVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIY 316
T+VDVRIIDDEVTIK+VQ+KKINCLLFVSKV+D+L+LDLHHVAG +G+++SFLFN+KI
Sbjct: 323 TDVDVRIIDDEVTIKIVQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKIS 382
Query: 317 EGSSVYASAIANKLIEVVDRQYASTPSTS----CY 347
EGSSVYASAIA++++EV+ +QY S + CY
Sbjct: 383 EGSSVYASAIADRVMEVLKKQYMEALSANNGYHCY 417
>AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:1885146-1886564 REVERSE
Length = 420
Score = 270 bits (691), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/335 (47%), Positives = 211/335 (62%), Gaps = 58/335 (17%)
Query: 35 PNHTTP--LSF---------------VGDLPMTDTASASSILYDPLFHLNLPPQPPLFRD 77
PNHTTP LS + D+ MT ++S ++ YDPLFHLN P QPP
Sbjct: 119 PNHTTPDLLSLLQLPRSSLPPFANPSIQDIIMTTSSSVAA--YDPLFHLNFPLQPP---- 172
Query: 78 LFQSLPPHGYSLPGSRGSSLFGGVGDDHVEGSGGVNLYQEGDGEQQFDNGVLDFTWDMAC 137
GS F GV D E + GVNL + + D+G+
Sbjct: 173 ---------------NGS--FMGVDQDQTETNQGVNLMYDEEN-NNLDDGL--------- 205
Query: 138 MGNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTV 197
GR K F TER+RR H KD++ DL+NL+PNP+KNDRAS+VG+AI+YIKELLRT+
Sbjct: 206 NRKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTI 265
Query: 198 NELKILVEKKRCA-RERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKD 256
+E K+LVEKKR R R ++E+ +S++V+ + N +LR WL+RKSK
Sbjct: 266 DEFKLLVEKKRVKQRNREGDDVVDENFKA---QSEVVEQCLINKKNNALRCSWLKRKSKF 322
Query: 257 TEVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIY 316
T+VDVRIIDDEVTIK+VQ+KKINCLLFVSKV+D+L+LDLHHVAG +G+++SFLFN+KI
Sbjct: 323 TDVDVRIIDDEVTIKIVQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKIS 382
Query: 317 EGSSVYASAIANKLIEVVDRQYASTPSTS----CY 347
EGSSVYASAIA++++EV+ +QY S + CY
Sbjct: 383 EGSSVYASAIADRVMEVLKKQYMEALSANNGYHCY 417
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:13303014-13304661 FORWARD
Length = 458
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/306 (49%), Positives = 195/306 (63%), Gaps = 26/306 (8%)
Query: 55 ASSILYDPLFHLNLPPQPPLFRDLFQSLPPHGYSLPGSRGSSLFGGVGDDHVEGSGGVN- 113
A++++YDPLFHLN P QP RD Q GS L G ++ +GG+N
Sbjct: 166 AAAVMYDPLFHLNFPMQP---RDQNQL----------RNGSCLLGVEDQIQMDANGGMNV 212
Query: 114 LYQEGDGEQQFDNGVLDFTWDMACMGNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPN 173
LY EG ++ GR + TER+RR H D++ DL+NL+PN
Sbjct: 213 LYFEGANNNNGGFENEILEFNNGVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPN 272
Query: 174 PSKNDRASVVGDAINYIKELLRTVNELKILVEKKRCARERGKRQK------------IEE 221
P+K DRAS+VG+AI+YIKELLRT+ E K+LVEKKRC R R K++ EE
Sbjct: 273 PTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGRFRSKKRARVGEGGGGEDQEEEE 332
Query: 222 DSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRIIDDEVTIKLVQRKKINCL 281
D++ +S++ NN SLR WL+RKSK TEVDVRIIDDEVTIKLVQ+KKINCL
Sbjct: 333 DTVNYKPQSEVDQSCFNKNNNNSLRCSWLKRKSKVTEVDVRIIDDEVTIKLVQKKKINCL 392
Query: 282 LFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIYEGSSVYASAIANKLIEVVDRQYAST 341
LF +KVLD+LQLDLHHVAGG +G++YSFLFN+KI EGS VYAS IA+ L+EVV++QY
Sbjct: 393 LFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKICEGSCVYASGIADTLMEVVEKQYMEA 452
Query: 342 PSTSCY 347
++ Y
Sbjct: 453 VPSNGY 458
>AT2G31215.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:13299807-13300302 FORWARD
Length = 129
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 141 GRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNEL 200
G+ + F TER+RR D++ DL+NL+PNP+K AS+V D I YI EL R V+EL
Sbjct: 16 GKGSKKSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSEL 75
Query: 201 KILVEKKRCARERGKRQKIEEDSIGNVHESKIVDDP 236
K LVEKK+C + IE D+ ++ + ++ P
Sbjct: 76 KYLVEKKKCG---ARHNNIEVDNKNTIYGTSKIEHP 108
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
MYC2; DNA binding / transcription activator/
transcription factor | chr1:11799042-11800913 REVERSE
Length = 623
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 20/193 (10%)
Query: 139 GNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVN 198
NGR+ + H ERQRR+ + ++ LR +VPN SK D+AS++GDAI YI N
Sbjct: 444 ANGREE-PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYI-------N 495
Query: 199 ELKILVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTE 258
ELK V K + + K Q +EE + D S + S++ + E
Sbjct: 496 ELKSKVVKTESEKLQIKNQ-LEEVKLELAGRKASASGGDMSSSCSSIKPVGM-------E 547
Query: 259 VDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYY----SFLFNSK 314
++V+II + I++ K+ + + L +L+L+++H + V D + +
Sbjct: 548 IEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFR 607
Query: 315 IYEGSSVYASAIA 327
IY + AS I+
Sbjct: 608 IYTQEQLRASLIS 620
>AT5G46760.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:18974231-18976009 FORWARD
Length = 592
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 33/177 (18%)
Query: 139 GNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVN 198
NGR+ + H ERQRR+ + ++ LR +VPN SK D+AS++GDAI+YI EL
Sbjct: 407 ANGREEP-LNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINEL----- 460
Query: 199 ELKILVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNG-SLRSFWLQRKSK-- 255
K + + +++I+ K +D + NNG S +RKS
Sbjct: 461 -------KSKLQQAESDKEEIQ----------KKLDGMSKEGNNGKGCGSRAKERKSSNQ 503
Query: 256 -------DTEVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGD 305
+ E+DV+II +V I++ KK + + L EL L+++H + V D
Sbjct: 504 DSTASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVND 560
>AT2G46510.1 | Symbols: ATAIB | ATAIB (ABA-INDUCIBLE BHLH-TYPE
TRANSCRIPTION FACTOR); DNA binding / transcription
factor | chr2:19091187-19092887 REVERSE
Length = 566
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 139 GNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVN 198
NGR+ + H ERQRR+ + ++ LR++VPN SK D+AS++GDAI+YIKEL V
Sbjct: 387 ANGREEP-LNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVK 445
Query: 199 ELKILVEKKRCARERGKRQKIEEDSIGNVHESKIVD 234
++E +R G + + E + V ES VD
Sbjct: 446 ----IMEDERV----GTDKSLSESNTITVEESPEVD 473
>AT4G17880.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:9933702-9935471 REVERSE
Length = 589
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 139 GNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVN 198
NGR+ + H ERQRR+ + ++ LR +VPN SK D+AS++GDAI+YI +
Sbjct: 408 ANGREEP-LNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYI-------S 459
Query: 199 ELKILVEKKRCARERGKRQ-KIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSK-- 255
ELK ++K +E ++Q + GN S V D R Q S
Sbjct: 460 ELKSKLQKAESDKEELQKQIDVMNKEAGNAKSS--VKD----------RKCLNQESSVLI 507
Query: 256 DTEVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGD 305
+ EVDV+II + I++ K+ + + L EL L+++H + V D
Sbjct: 508 EMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVND 557
>AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA binding /
transcription activator/ transcription factor |
chr3:8715525-8717772 REVERSE
Length = 414
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNP--SKNDRASVVGDAINYIKEL------LRTVN 198
+ H A ER RR+ + + LR+L+P + D+AS++G AI +++EL L +
Sbjct: 197 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 256
Query: 199 ELKILVEKKRCARERGKRQKIEEDSIGNVHESKIVD-DPDQSFNNGSLRSFWLQRKSKDT 257
+IL E R ++ N + I+ + + G LR + KS
Sbjct: 257 RRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLA 316
Query: 258 EVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIYE 317
+V+V+++ + IK++ R++ L+ L++L L + H + + FN KI
Sbjct: 317 DVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITS 376
Query: 318 GSSVYASAIANKLIEVVDRQYAST 341
+ A IA+ + ++ +A+T
Sbjct: 377 ETRFTAEDIASSIQQIFSFIHANT 400
>AT1G12860.1 | Symbols: SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA binding
/ transcription factor | chr1:4382223-4386392 FORWARD
Length = 828
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVE 205
K+ ER+RR+ + D+ LR++VP SK DRAS++GDAI+Y+KELL+ +N+L +E
Sbjct: 645 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 702
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNEL 200
K+ ER+RR+ + D+ LR++VP SK DRAS++GDAI+Y+KELL+ +N+L
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 359
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNEL 200
K+ ER+RR+ + D+ LR++VP SK DRAS++GDAI+Y+KELL+ +N+L
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 359
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNEL 200
K+ ER+RR+ + D+ LR++VP SK DRAS++GDAI+Y+KELL+ +N+L
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 359
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17796362-17797647 REVERSE
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 19/145 (13%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKR 208
H ER+RR+ + ++ L LVP K D+ASV+GDA+ +IK L V EL+
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELE------- 205
Query: 209 CARERGKRQKIEEDSIGNVHESK-IVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRIIDDE 267
E+ K +++E S+ V +SK I+DD +QSF++ F E++VR D++
Sbjct: 206 ---EQKKERRLE--SMVLVKKSKLILDDNNQSFSSSCEDGF---SDLDLPEIEVRFSDED 257
Query: 268 VTIKLVQRKKINCLLFVSKVLDELQ 292
V IK++ K+ L +K++ E++
Sbjct: 258 VLIKILCEKQKGHL---AKIMAEIE 279
>AT2G16910.1 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA binding
/ transcription factor | chr2:7331721-7334077 FORWARD
Length = 571
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEK 206
K+ ER+RR+ + D+ LR+LVP +K DRAS++GDAINY+KEL EL+ +E+
Sbjct: 314 KNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372
>AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:621334-622697 FORWARD
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 10/194 (5%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNPS---KNDRASVVGDAINYIKELLRTVNELKIL 203
+ H A ER RR+ + + + LR+L+P PS + D+AS+VG AI++IKEL + + L+
Sbjct: 115 MTHIAVERNRRRQMNEHLNSLRSLMP-PSFLQRGDQASIVGGAIDFIKELEQLLQSLE-- 171
Query: 204 VEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRI 263
EK++ + + S + + + NG F TEV+ +
Sbjct: 172 AEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFG---GGDTTEVEATV 228
Query: 264 IDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIYEGSSV-Y 322
I + V++K+ ++ +L ++EL+L + H+ D+ + FN K+ +G +
Sbjct: 229 IQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGCKLGS 288
Query: 323 ASAIANKLIEVVDR 336
A IA + ++ ++
Sbjct: 289 ADEIATAVHQIFEQ 302
>AT4G09820.1 | Symbols: TT8 | TT8 (TRANSPARENT TESTA 8); DNA binding
/ transcription factor | chr4:6182067-6186261 FORWARD
Length = 518
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 59/100 (59%)
Query: 146 NIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVE 205
++ H ER+RR+ + +K+ LR++VP +K D+ S++GD I Y+ L + V+EL+
Sbjct: 361 DLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHH 420
Query: 206 KKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSL 245
+++ R R ++K E+ ++ E+ ++ + + +G L
Sbjct: 421 EQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLL 460
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:109595-111367 FORWARD
Length = 590
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 139 GNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKEL 193
NGR + H ERQRR+ + ++ LR++VPN SK D+AS++GDA++YI EL
Sbjct: 425 ANGRAEA-LNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINEL 478
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:109595-111367 FORWARD
Length = 590
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 139 GNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKEL 193
NGR + H ERQRR+ + ++ LR++VPN SK D+AS++GDA++YI EL
Sbjct: 425 ANGRAEA-LNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINEL 478
>AT5G65640.1 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA
binding / transcription factor | chr5:26237137-26238904
FORWARD
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 24/126 (19%)
Query: 143 QGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKI 202
+G K+ ER+RR+ + D+ LR++VP SK DR S++GDAI+Y+KELL +N+L
Sbjct: 173 EGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKL-- 230
Query: 203 LVEKKRCARERGKRQKIEEDSIG---NVHESKIVDD-PDQSFNNGSLRS---FWLQRKSK 255
+ EE +G N H SK+ D D + N +R+ F + R+ +
Sbjct: 231 ---------------QDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDE 275
Query: 256 DTEVDV 261
DT VD+
Sbjct: 276 DTRVDI 281
>AT3G06120.1 | Symbols: MUTE | MUTE (MUTE); DNA binding /
transcription factor | chr3:1846531-1848016 FORWARD
Length = 202
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPN--PSKNDRASVVGDAINYIKELLRTVNELKILV 204
+ H A ER RR+ + + LR+L P + D+AS++G I +IKEL + V ++L
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLV---QVLE 57
Query: 205 EKKRCARERGKR-------QKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDT 257
KKR R+ R Q IE S+G + + + S
Sbjct: 58 SKKR--RKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHA 115
Query: 258 EVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKI 315
V+ +I V +++V R+ + L+ + VL++L + H+ + + + F KI
Sbjct: 116 NVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI 173
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14647449 FORWARD
Length = 254
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 40/234 (17%)
Query: 124 FDNGVLDF-TWDM--ACMGNGRQG---------GNIKHFATERQRRQHIKDKYDDLRNLV 171
F N L+F +W M A G+G + K+ +ER RRQ + + LR++V
Sbjct: 18 FQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVV 77
Query: 172 PNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKRCARERGKRQKIEEDSI----GNV 227
PN SK D+ASV+ D+I+Y++EL+ L+ + RE R + E+ + N
Sbjct: 78 PNISKLDKASVIKDSIDYMQELIDQEKTLEAEI------RELESRSTLLENPVRDYDCNF 131
Query: 228 HESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVD---VRIIDDEVT--------IKLVQRK 276
E+ + D D N +RS ++ T V + +++ +VT + + K
Sbjct: 132 AETHLQDFSD----NNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSK 187
Query: 277 KINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIYEGSSVYASAIANKL 330
K ++ + KVL+ L L ++ + + S L + + +SA+ K+
Sbjct: 188 KRETMVQLCKVLESLNL---NILTTNFSSFTSRLSTTLFLQADEEESSAVEAKI 238
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:362230-363639 REVERSE
Length = 423
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 93 RGSSLFG-GVGDDHVEGSGGVNLYQEGD----GEQQFDNG-----VLDFTWDMACMGNGR 142
R S+FG G H +G D G QQF + L+ T A
Sbjct: 184 RVKSIFGSGKTTKHTNQTGSYPKPAVSDHSKSGNQQFGSERKRRRKLETTRVAAATKEKH 243
Query: 143 QGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKI 202
+ H E+QRR+ + ++ LR +VP S+ D+AS++ DA++YI+ L +++L+
Sbjct: 244 HPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLET 303
Query: 203 LVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVR 262
++K + E K ++ + E ++ P +S N GS D EV V+
Sbjct: 304 EIKKMKMT-ETDKLDNSSSNTSPSSVEYQVNQKPSKS-NRGS-----------DLEVQVK 350
Query: 263 IIDDEVTIKLVQRKKIN 279
I+ +E I+ VQ + +N
Sbjct: 351 IVGEEAIIR-VQTENVN 366
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29 |
FRU (FER-LIKE REGULATOR OF IRON UPTAKE); DNA binding /
transcription factor | chr2:12004713-12005908 FORWARD
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELK 201
+ +ER+RR +KDK LR+LVPN +K D+AS+VGDA+ Y++EL +LK
Sbjct: 131 RTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLK 184
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14645505 FORWARD
Length = 263
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 37/199 (18%)
Query: 124 FDNGVLDF-TWDM--ACMGNGRQG---------GNIKHFATERQRRQHIKDKYDDLRNLV 171
F N L+F +W M A G+G + K+ +ER RRQ + + LR++V
Sbjct: 18 FQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVV 77
Query: 172 PNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKRCARERGKRQKIEEDSI----GNV 227
PN SK D+ASV+ D+I+Y++EL+ L+ + RE R + E+ + N
Sbjct: 78 PNISKLDKASVIKDSIDYMQELIDQEKTLEAEI------RELESRSTLLENPVRDYDCNF 131
Query: 228 HESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVD---VRIIDDEVT--------IKLVQRK 276
E+ + D D N +RS ++ T V + +++ +VT + + K
Sbjct: 132 AETHLQDFSD----NNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSK 187
Query: 277 KINCLLFVSKVLDELQLDL 295
K ++ + KVL+ L L++
Sbjct: 188 KRETMVQLCKVLESLNLNI 206
>AT5G46690.1 | Symbols: bHLH071 | bHLH071 (beta HLH protein 71); DNA
binding / transcription factor | chr5:18945639-18947434
FORWARD
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNP--SKNDRASVVGDAINYIKELLRTVNELKILV 204
+ H A ER RR+ + LR+L+P P K D+AS+VG AI++IKEL + L +
Sbjct: 88 MTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKL--LSLEA 145
Query: 205 EKKRCAR-ERGKRQKIEEDSIG---NVHESKIVD---------DPDQSFNNGSLRSFWLQ 251
+K A+ + +DS G N H+ + DP Q NGS S
Sbjct: 146 QKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRNGSTSSV--- 202
Query: 252 RKSKDTEVDVRIIDDEVTIKLVQRKK 277
K+ +++V +I+ I+++ R++
Sbjct: 203 -KTPMEDLEVTLIETHANIRILSRRR 227
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF
GLABRA 3); DNA binding / transcription factor |
chr1:23599809-23602734 FORWARD
Length = 596
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKR 208
H +E++RR+ + +++ LR+++P+ SK D+ S++ D I Y+++L + V EL +
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL------ES 459
Query: 209 CARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEV--------- 259
C R+ + ++ + + K DD ++ + + S +RK D V
Sbjct: 460 C------RESADTETRITMMKRKKPDDEEERASANCMNS---KRKGSDVNVGEDEPADIG 510
Query: 260 ------DVRI--IDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLF 311
++RI + +EV I+L + LL + V+ +L LD H V
Sbjct: 511 YAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCLTV 570
Query: 312 NSKIYEGSSVYASAIANKLIEVV 334
N K ++G+ + + + + ++ V
Sbjct: 571 NCK-HKGTKIATTGMIQEALQRV 592
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF
GLABRA 3); DNA binding / transcription factor |
chr1:23599809-23602734 FORWARD
Length = 596
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKR 208
H +E++RR+ + +++ LR+++P+ SK D+ S++ D I Y+++L + V EL +
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL------ES 459
Query: 209 CARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEV--------- 259
C R+ + ++ + + K DD ++ + + S +RK D V
Sbjct: 460 C------RESADTETRITMMKRKKPDDEEERASANCMNS---KRKGSDVNVGEDEPADIG 510
Query: 260 ------DVRI--IDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLF 311
++RI + +EV I+L + LL + V+ +L LD H V
Sbjct: 511 YAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCLTV 570
Query: 312 NSKIYEGSSVYASAIANKLIEVV 334
N K ++G+ + + + + ++ V
Sbjct: 571 NCK-HKGTKIATTGMIQEALQRV 592
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:9267599-9269002 FORWARD
Length = 467
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 139 GNGRQGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTV 197
NGR+ + H ERQRR+ + ++ LR +VPN SK D+AS++ DAI YI ++ + +
Sbjct: 312 ANGREEA-LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKI 369
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14647449 FORWARD
Length = 225
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 12/83 (14%)
Query: 124 FDNGVLDF-TWDM--ACMGNGRQG---------GNIKHFATERQRRQHIKDKYDDLRNLV 171
F N L+F +W M A G+G + K+ +ER RRQ + + LR++V
Sbjct: 18 FQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVV 77
Query: 172 PNPSKNDRASVVGDAINYIKELL 194
PN SK D+ASV+ D+I+Y++EL+
Sbjct: 78 PNISKLDKASVIKDSIDYMQELI 100
>AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:7938448-7940489 REVERSE
Length = 304
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPN--PSKNDRASVVGDAINYIKELLRTVNELKILV 204
+ H A ER RR+ + + LR+L+P+ + D+AS+VG AINY+KEL + +
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSM---- 170
Query: 205 EKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKD--TEVDVR 262
E KR K K S+ SF S +S +S E++V
Sbjct: 171 EPKRTRTHDPKGDKTSTSSLVGPFTDFF------SFPQYSTKSSSDVPESSSSPAEIEVT 224
Query: 263 IIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSKIYEGSSV- 321
+ + IK++ +KK LL + L L+L L H+ + + + + ++ EGS +
Sbjct: 225 VAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLN 284
Query: 322 YASAIANKLIEVVDR 336
IA L + + R
Sbjct: 285 TVDDIATALNQTIRR 299
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:19239694-19242373 FORWARD
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 89/177 (50%), Gaps = 20/177 (11%)
Query: 143 QGGNIKHFATERQRRQHIKDKYDDLRNLVPNP--SKNDRASVVGDAINYIKELLRTVNEL 200
+ + H A ER RR+ + + LR+++P+ + D+AS+VG AI+++K L + +L
Sbjct: 189 ESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQ---QL 245
Query: 201 KILVEKKRCARERGKRQKIEED-SIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEV 259
+ L +KR + +++I ED S+ N+ +K LR+ + +S ++
Sbjct: 246 QSLEAQKRSQQSDDNKEQIPEDNSLRNISSNK-------------LRASNKEEQSSKLKI 292
Query: 260 DVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHV-AGGHVGDYYSFLFNSKI 315
+ +I+ V +K+ +K LL +L++L+ + H+ S+ FN K+
Sbjct: 293 EATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKM 349
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:22940231-22941332 FORWARD
Length = 307
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 24/157 (15%)
Query: 147 IKHFATERQRRQHIKDKYDDLRNLVPNPS---KNDRASVVGDAINYIKELLRTVNELKIL 203
I H A ER RR+ + + + LR L+P PS + D+AS+VG AINY+K L + + L+
Sbjct: 127 INHIAVERNRRRQMNEHINSLRALLP-PSYIQRGDQASIVGGAINYVKVLEQIIQSLE-- 183
Query: 204 VEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFW--LQRKSKDTEVDV 261
+++R ++Q S++V++ + S W L+ ++ +++
Sbjct: 184 ------SQKRTQQQS----------NSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEA 227
Query: 262 RIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHV 298
+I + V++K+ KK LL L++L+L + H+
Sbjct: 228 TVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHL 264
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:22939661-22941332 FORWARD
Length = 358
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 24/161 (14%)
Query: 143 QGGNIKHFATERQRRQHIKDKYDDLRNLVPNPS---KNDRASVVGDAINYIKELLRTVNE 199
+ I H A ER RR+ + + + LR L+P PS + D+AS+VG AINY+K L + +
Sbjct: 174 ENQRINHIAVERNRRRQMNEHINSLRALLP-PSYIQRGDQASIVGGAINYVKVLEQIIQS 232
Query: 200 LKILVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFW--LQRKSKDT 257
L+ +++R ++Q S++V++ + S W L+ ++
Sbjct: 233 LE--------SQKRTQQQS----------NSEVVENALNHLSGISSNDLWTTLEDQTCIP 274
Query: 258 EVDVRIIDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHV 298
+++ +I + V++K+ KK LL L++L+L + H+
Sbjct: 275 KIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHL 315
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14645168 FORWARD
Length = 184
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 12/83 (14%)
Query: 124 FDNGVLDF-TWDM--ACMGNGRQG---------GNIKHFATERQRRQHIKDKYDDLRNLV 171
F N L+F +W M A G+G + K+ +ER RRQ + + LR++V
Sbjct: 18 FQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVV 77
Query: 172 PNPSKNDRASVVGDAINYIKELL 194
PN SK D+ASV+ D+I+Y++EL+
Sbjct: 78 PNISKLDKASVIKDSIDYMQELI 100
>AT5G41315.1 | Symbols: GL3, MYC6.2 | GL3 (GLABROUS 3); protein
binding / transcription factor | chr5:16529457-16532866
FORWARD
Length = 637
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 149 HFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKKR 208
H E++RR+ + +++ LR ++P+ +K D+ S++ D I Y++EL R V EL+ E
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTD 501
Query: 209 CARERG----KRQK---IEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEV-- 259
RG KR+K E + N ++ + S NN + + DT
Sbjct: 502 -TETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVG------EAEPADTGFTG 554
Query: 260 ---DVRI--IDDEVTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGDYYSFLFNSK 314
++RI +EV I+L + LL + V+ +L LD H V N K
Sbjct: 555 LTDNLRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLLCLTVNCK 614
Query: 315 IYEGSSVYASAIANKLIEVV 334
++GS + + + ++ V
Sbjct: 615 -HKGSKIATPGMIKEALQRV 633
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:3341357-3342877 FORWARD
Length = 315
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 19/119 (15%)
Query: 143 QGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKI 202
+G K+ ER+RR+ + D+ LR++VP +K DR S++GDAI+Y+KELL +N+L
Sbjct: 146 EGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKL-- 203
Query: 203 LVEKKRCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDV 261
Q+ E++ N H S ++ ++S SL+ F + ++ +T +D+
Sbjct: 204 --------------QEDEQELGSNSHLSTLIT--NESMVRNSLK-FEVDQREVNTHIDI 245
>AT5G65640.2 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA
binding / transcription factor | chr5:26237137-26238635
FORWARD
Length = 290
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 143 QGGNIKHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELK 201
+G K+ ER+RR+ + D+ LR++VP SK DR S++GDAI+Y+KELL +N+L+
Sbjct: 173 EGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQ 231
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:9678012-9679165 FORWARD
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNELKILVEKK 207
+H ER+RR+ + +K+ L L+P K D+ +++ DAI+ +K+L +L+ L E+K
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQL---QEQLRTLKEEK 175
Query: 208 RCARERGKRQKIEEDSIGNVHESKIVDDPDQSFNNGSLRSFWLQRKSKDTEVDVRIIDDE 267
R+ +S+ V +SK+ D + + + S ++ E++ +I ++
Sbjct: 176 EATRQM--------ESMILVKKSKVFFDEEPNLSCSP--SVHIEFDQALPEIEAKISQND 225
Query: 268 VTIKLVQRKKINCLLFVSKVLDELQLDLHHVAGGHVGD 305
+ I+++ K C++ + ++ QL + + GD
Sbjct: 226 ILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGD 263
>AT4G38070.1 | Symbols: | bHLH family protein |
chr4:17876535-17882569 FORWARD
Length = 1513
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 148 KHFATERQRRQHIKDKYDDLRNLVPNPSKNDRASVVGDAINYIKELLRTVNEL 200
KH ER+RR I ++ LR ++PN K D+ASV+G+ + Y EL + V ++
Sbjct: 1352 KHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDI 1404