Jatropha Genome Database

JcCA0118941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0118941.10 - phase: 0 /partial
         (87 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09740.1 | Symbols: HAM2 | HAM2 (histone acetyltransferase of...   162   3e-41
AT5G64610.1 | Symbols: HAM1 | HAM1 (HISTONE ACETYLTRANSFERASE OF...   160   1e-40
AT5G09740.2 | Symbols: HAM2 | HAM2 (histone acetyltransferase of...   110   1e-25

>AT5G09740.1 | Symbols: HAM2 | HAM2 (histone acetyltransferase of
           the MYST family 2); H3/H4 histone acetyltransferase/
           histone acetyltransferase/ nucleic acid binding / zinc
           ion binding | chr5:3022141-3024711 REVERSE
          Length = 445

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 76/77 (98%), Positives = 76/77 (98%)

Query: 1   RKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYV 60
           RKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVY QNLCYLAKLFLDHKTLYYDVDLFLFYV
Sbjct: 223 RKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYAQNLCYLAKLFLDHKTLYYDVDLFLFYV 282

Query: 61  LCECDDRGCHMVGYFSK 77
           LCECDDRGCHMVGYFSK
Sbjct: 283 LCECDDRGCHMVGYFSK 299


>AT5G64610.1 | Symbols: HAM1 | HAM1 (HISTONE ACETYLTRANSFERASE OF
           THE MYST FAMILY 1); H3/H4 histone acetyltransferase/
           histone acetyltransferase/ nucleic acid binding / zinc
           ion binding | chr5:25828333-25830503 REVERSE
          Length = 445

 Score =  160 bits (405), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 74/77 (96%), Positives = 75/77 (97%)

Query: 1   RKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYV 60
           RKCDLKHPPGDEIYRS TLSMFEVDGKKNKVY QNLCYLAKLFLDHKTLYYDVDLFLFY+
Sbjct: 223 RKCDLKHPPGDEIYRSSTLSMFEVDGKKNKVYAQNLCYLAKLFLDHKTLYYDVDLFLFYI 282

Query: 61  LCECDDRGCHMVGYFSK 77
           LCECDDRGCHMVGYFSK
Sbjct: 283 LCECDDRGCHMVGYFSK 299


>AT5G09740.2 | Symbols: HAM2 | HAM2 (histone acetyltransferase of
           the MYST family 2); H3/H4 histone acetyltransferase/
           histone acetyltransferase/ nucleic acid binding / zinc
           ion binding | chr5:3022141-3024711 REVERSE
          Length = 367

 Score =  110 bits (276), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/78 (74%), Positives = 60/78 (76%), Gaps = 1/78 (1%)

Query: 1   RKCDLKHPPGDEIYRSGTLSMFEVDGK-KNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFY 59
           RK D  H  G E   + +L   E   K KNKVY QNLCYLAKLFLDHKTLYYDVDLFLFY
Sbjct: 144 RKIDETHIEGHEELDAASLREHEEFTKVKNKVYAQNLCYLAKLFLDHKTLYYDVDLFLFY 203

Query: 60  VLCECDDRGCHMVGYFSK 77
           VLCECDDRGCHMVGYFSK
Sbjct: 204 VLCECDDRGCHMVGYFSK 221