Jatropha Genome Database
- JcCA0118311.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0118311.10 + phase: 0 /pseudo/partial
(207 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 126 1e-29
AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID INDUC... 120 7e-28
AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID... 97 1e-20
AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 83 1e-16
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 81 5e-16
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 81 6e-16
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 81 6e-16
AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 80 1e-15
AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 80 1e-15
AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor | chr... 77 9e-15
AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATE... 74 6e-14
AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 74 7e-14
AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 72 2e-13
AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 72 2e-13
AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 72 2e-13
AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3); t... 71 5e-13
AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID ... 71 6e-13
AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID INDUC... 70 8e-13
AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor | chr... 70 1e-12
AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 69 2e-12
AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 69 2e-12
AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID INDUC... 68 4e-12
AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID INDUC... 68 4e-12
AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIB... 68 4e-12
AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID... 68 5e-12
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCI... 67 8e-12
AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); tr... 67 8e-12
AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6... 64 5e-11
AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID I... 64 1e-10
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3... 60 1e-09
AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 54 6e-08
AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 54 6e-08
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS); transc... 52 3e-07
AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 51 4e-07
AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID INDUC... 51 5e-07
AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID INDUC... 50 1e-06
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 49 2e-06
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 49 2e-06
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 49 2e-06
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 79/104 (75%), Gaps = 6/104 (5%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ GVPIGRK++LNAY+SY++LS +D+LFRGLLAAQR+ + + K + D
Sbjct: 158 MDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDG----- 212
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSELST 205
GE+TL Y+D+EGD +LVGDVPWQMFVS+ KRLRV+KSSE+S+
Sbjct: 213 -KGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISS 255
>AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor |
chr1:19305670-19307130 FORWARD
Length = 267
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 80/102 (78%), Gaps = 6/102 (5%)
Query: 104 GVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGTES 163
GVPIGRK++L+A++SY++LS +D+LFRGLLAAQR+ + I+ K GL +
Sbjct: 158 GVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSS-----IEDEKPITGLLDG-N 211
Query: 164 GEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSELST 205
GEYTL Y+D+EGD +LVGDVPWQMFVS+ KRLRV+K+SE+S+
Sbjct: 212 GEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEISS 253
>AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor |
chr5:9033480-9034554 FORWARD
Length = 175
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 68/100 (68%), Gaps = 24/100 (24%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
++GVPIGRK+NL+AY++YQ+LS A+D+LF ++ ++N+
Sbjct: 87 MEGVPIGRKVNLSAYNNYQQLSHAVDQLF--------SKKDSWDLNR------------- 125
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSS 201
+YTLVY+D+EGD +LVGDVPW+MFVST KRL VLK+S
Sbjct: 126 ---QYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTS 162
>AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 239
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 14/108 (12%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ GV IGRK+++ A+ SY+ L+ ++E+F G+ TC + V + + G
Sbjct: 131 MDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGT---TCREK-VKPLRLLDG------- 179
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSELS--TPR 207
S ++ L Y+D EGD +LVGDVPW+MF+++ KRLR++ +SE S PR
Sbjct: 180 -SSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPR 226
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 27/110 (24%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ GV IGRK++LNA+ SY+ L+ ++++F G GLT
Sbjct: 136 MDGVAIGRKVDLNAHSSYENLAQTLEDMF------------------FRTNPGTVGLTSQ 177
Query: 162 ---------ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
S E+ L Y+D EGD +LVGDVPW+MF+++ KRLRV+K+SE
Sbjct: 178 FTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 227
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 27/110 (24%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ GV IGRK++LNA+ SY+ L+ ++++F G GLT
Sbjct: 135 MDGVAIGRKVDLNAHSSYENLAQTLEDMF------------------FRTNPGTVGLTSQ 176
Query: 162 ---------ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
S E+ L Y+D EGD +LVGDVPW+MF+++ KRLRV+K+SE
Sbjct: 177 FTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 27/110 (24%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ GV IGRK++LNA+ SY+ L+ ++++F G GLT
Sbjct: 135 MDGVAIGRKVDLNAHSSYENLAQTLEDMF------------------FRTNPGTVGLTSQ 176
Query: 162 ---------ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
S E+ L Y+D EGD +LVGDVPW+MF+++ KRLRV+K+SE
Sbjct: 177 FTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226
>AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143928 FORWARD
Length = 302
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 10/103 (9%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELF-RGLLAAQRETCEARNVNKIDV-AKGDAGLT 159
+ G+PIGRKI+LNA+ Y+ LS ++E+F + L ++ + + + G +GL
Sbjct: 143 MDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLV 202
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
L Y+D EGD +LVGDVPW MF+ + +RLR++K+SE
Sbjct: 203 --------LTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143755 FORWARD
Length = 246
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 10/103 (9%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELF-RGLLAAQRETCEARNVNKIDV-AKGDAGLT 159
+ G+PIGRKI+LNA+ Y+ LS ++E+F + L ++ + + + G +GL
Sbjct: 143 MDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLV 202
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
L Y+D EGD +LVGDVPW MF+ + +RLR++K+SE
Sbjct: 203 --------LTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 261
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 25/111 (22%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQ-----------RETCEARNVNKID 150
+ GV IGRK++LNA DSY L +D +F + + +ETC ++ ++
Sbjct: 158 MDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLDG-- 215
Query: 151 VAKGDAGLTGTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSS 201
S EY + YQD +GD +LVGDVPWQMF+ + RLR++K+S
Sbjct: 216 ------------SSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTS 254
>AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED
PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 305
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 15/107 (14%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRET---CEARNVNK---IDVAKGD 155
++G P RKI+L Y SY +LS A++++F Q + C +N+ D+ +G
Sbjct: 192 MEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGS 251
Query: 156 AGLTGTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
EY + Y+D + D +LVGDVPW+MF+ + K+LR++KSSE
Sbjct: 252 ---------EYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSE 289
>AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196716 FORWARD
Length = 243
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 13/105 (12%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFR----GLLAAQRETCEARNVNKIDVAKGDAG 157
+ G P RK++L Y SYQ LS A+ ++F G AQ ID
Sbjct: 131 MDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQ---------GMIDFMNESKL 181
Query: 158 LTGTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ S EY Y+D +GD +LVGDVPW+MFV + KRLR++K SE
Sbjct: 182 MNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSE 226
>AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 319
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L Y SYQ+LS A++++F Q A+ ++ K L G+
Sbjct: 206 MDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGS 265
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
E + L Y+D +GD +LVGDVPW++F T ++L+++K S+
Sbjct: 266 E---FVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 303
>AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L Y SYQ+LS A++++F Q A+ ++ K L G+
Sbjct: 206 MDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGS 265
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
E + L Y+D +GD +LVGDVPW++F T ++L+++K S+
Sbjct: 266 E---FVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 303
>AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L Y SYQ+LS A++++F Q A+ ++ K L G+
Sbjct: 206 MDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGS 265
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
E + L Y+D +GD +LVGDVPW++F T ++L+++K S+
Sbjct: 266 E---FVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 303
>AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 229
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RKI+L Y SY +LS A+ +F + E ID +
Sbjct: 117 MDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGM----IDFMNERKLMDLV 172
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
S +Y Y+D +GD +LVGDVPW MFV T KRLR++K S+
Sbjct: 173 NSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSD 213
>AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/
transcription repressor | chr4:8348521-8349923 REVERSE
Length = 228
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFR----GLLAAQRETCEARNVNKIDVAKGDAG 157
+ G P RK++L Y SY+ LS A+ ++F G AQ ID
Sbjct: 117 MDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQ---------GMIDFMNESKV 167
Query: 158 LTGTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ S EY Y+D +GD +LVGDVPW MFV + KRLR++K SE
Sbjct: 168 MDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSE 212
>AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID
INDUCIBLE 15); transcription factor |
chr1:30221780-30222702 REVERSE
Length = 179
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 18/94 (19%)
Query: 109 RKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGTESGEYTL 168
RK++L YD Y +L A++ +F+G++ R T R GE+
Sbjct: 100 RKVDLGMYDCYGQLFTALENMFQGIITICRVTELERK------------------GEFVA 141
Query: 169 VYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
Y+D +GD +LVGDVPW MFV + KR+R++K+ +
Sbjct: 142 TYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGD 175
>AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 236
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 13/105 (12%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQ---RETCEARNVNK-IDVAKGDAG 157
+ G P RKI+L Y +YQ LS A+ ++F + + N +K ID+ G
Sbjct: 125 MDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGS-- 182
Query: 158 LTGTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+Y Y+D +GD +LVGDVPW+MFV + KR+R++K SE
Sbjct: 183 -------DYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSE 220
>AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 338
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L +Y +Y +LS A++++F Q + A + + K L G
Sbjct: 223 MDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGK 282
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ Y L Y+D +GD +LVGDVPW+MF+ K+L+++K +
Sbjct: 283 D---YVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCD 320
>AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 336
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RK++L +Y +Y +LS A++++F Q + A + + K L G
Sbjct: 223 MDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGK 282
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ Y L Y+D +GD +LVGDVPW+MF+ K+L+++K +
Sbjct: 283 D---YVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCD 320
>AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID
INDUCIBLE 20); transcription factor |
chr2:19307861-19308869 FORWARD
Length = 175
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 22/102 (21%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRG--LLAAQRETCEARNVNKIDVAKGDAGLT 159
++GVPIGRKI+L + + Y+ L +D +F L A + + C ++
Sbjct: 91 MEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKS-------------- 136
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSS 201
+ L Y D EGD ++VGDVPW+MF+ST +RL++ +++
Sbjct: 137 ------HVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
>AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID
INDUCIBLE 30); transcription factor |
chr3:22995835-22996593 FORWARD
Length = 172
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 22/101 (21%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRG--LLAAQRETCEARNVNKIDVAKGDAGLT 159
++GVPIGRKI+L + + Y L +D +F L A + + C ++
Sbjct: 89 MEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKS-------------- 134
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKS 200
+ L Y D EGD ++VGDVPW+MF+S+ +RL++ ++
Sbjct: 135 ------HVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISRA 169
>AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE
2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 174
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 18/101 (17%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RKI+L Y +Y +L A++ +F+ ++ E CE G
Sbjct: 84 MDGAPYLRKIDLKTYKNYPELLKALENMFKVMIG---EYCERE---------------GY 125
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ + Y+D +GD +LVGDVPW MF S+ KRLR++K S+
Sbjct: 126 KGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSD 166
>AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor |
chr3:5264100-5265378 FORWARD
Length = 197
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 23/103 (22%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELF--RGLLAAQRETCEARNVNKIDVAKGDAGLT 159
+ GVP RK++L + Y L+ A+D+LF RG+ A ++
Sbjct: 103 MDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDG------------------- 143
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
++ EY +Y+D +GD +L GDVPW MF+ + KRLR++K S+
Sbjct: 144 --DNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSD 184
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCIBLE
2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 186
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 22/104 (21%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAA--QRETCEARNVNKIDVAKGDAGLT 159
+ G P RKI+L Y Y +L +++ +F+ + +RE
Sbjct: 95 MDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFERE-------------------- 134
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
G + ++ Y+D +GD +LVGDVPW+MFVS+ KRLR++K SE+
Sbjct: 135 GYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEV 178
>AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 189
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 18/101 (17%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G P RKI+L+ Y Y +L A++ +F+ + E G
Sbjct: 99 MDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFER------------------DGY 140
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ ++ Y+D +GD +L+GDVPW+MF+ T KRLR++K SE
Sbjct: 141 KGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSE 181
>AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6);
transcription factor | chr1:19672670-19673559 REVERSE
Length = 189
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 20/101 (19%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ GVP RKI+L + +SY L ++ LF G L I VAK
Sbjct: 100 MDGVPYMRKIDLGSSNSYINLVTVLENLF-GCLG-------------IGVAKE------G 139
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSE 202
+ EY ++Y+D + D +LVGDVPWQMF + KRLR++K S+
Sbjct: 140 KKCEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSD 180
>AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 168
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 22/106 (20%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLA--AQRETCEARNVNKIDVAKGDAGLT 159
+ G P RKI+L Y +Y +L A++ +F+ + ++RE
Sbjct: 81 MDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSERE-------------------- 120
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSELST 205
G + + Y+D +GD +LVGDVPW MF S+ ++LR++K SE T
Sbjct: 121 GYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEAPT 166
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor
| chr1:5365764-5366460 REVERSE
Length = 163
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 21/100 (21%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ G RKI+L Y YQ L+ A+ LF +N D K
Sbjct: 81 VDGAAFLRKIDLEMYKCYQDLASALQILF------------GCYINFDDTLK-------- 120
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSS 201
E +Y+D +GD +L GDVPW+MF+ + KRLR++K S
Sbjct: 121 -ESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
>AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 636
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 28/104 (26%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELF--RGLLAAQRETCEARNVNKIDVAKGDAGLT 159
++GVP+GR ++LNA Y +L I++LF +G L +RN
Sbjct: 528 MQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL-------RSRN-------------- 566
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
++ +V+ D EGD +LVGD PW F + KR+ + E+
Sbjct: 567 -----QWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEV 605
>AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 638
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 28/104 (26%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELF--RGLLAAQRETCEARNVNKIDVAKGDAGLT 159
++GVP+GR ++LNA Y +L I++LF +G L +RN
Sbjct: 530 MQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL-------RSRN-------------- 568
Query: 160 GTESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
++ +V+ D EGD +LVGD PW F + KR+ + E+
Sbjct: 569 -----QWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEV 607
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS);
transcription factor | chr1:6887353-6891182 FORWARD
Length = 902
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 22/97 (22%)
Query: 107 IGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGTESGEY 166
+GR I++ ++ Y++L AI+ +F GL + LT +S +
Sbjct: 804 VGRSIDVTSFKDYEELKSAIECMF-GL---------------------EGLLTHPQSSGW 841
Query: 167 TLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
LVY D E D +LVGD PW+ FV + +R+L +E+
Sbjct: 842 KLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEV 878
>AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196214 FORWARD
Length = 210
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFR----GLLAAQRETCEARNVNKIDVAKGDAG 157
+ G P RK++L Y SYQ LS A+ ++F G AQ ID
Sbjct: 131 MDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQ---------GMIDFMNESKL 181
Query: 158 LTGTESGEYTLVYQDSEGDTILVGDVPWQ 186
+ S EY Y+D +GD +LVGDVPW+
Sbjct: 182 MNLLNSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID
INDUCIBLE 29); transcription factor |
chr4:15583479-15584628 FORWARD
Length = 251
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
+ GV I RK+++ ++SY+ L+ ++ +F + E C+ + N
Sbjct: 166 MDGVAIARKVDIKLFNSYESLTNSLITMF-----TEYEDCDREDTN-------------- 206
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSELSTPR 207
YT +Q EGD +L GDV W++F + R+ +++ + R
Sbjct: 207 ----YTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIRDRPCAYTR 248
>AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID
INDUCIBLE 33); transcription factor |
chr5:23270024-23270959 FORWARD
Length = 171
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 102 IKGVPIGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGT 161
++G I ++I+L+ + SYQ L+ A+ ++F A + + +D++ G
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMF---------VDGADSTDDLDLSNAIPG---- 125
Query: 162 ESGEYTLVYQDSEGDTILVGDVPWQMFVSTAKRLRVL 198
+ + Y+D E D +L GD+ W+ FV AKR+R+L
Sbjct: 126 ----HLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/
transcription regulator | chr5:7016704-7021504 REVERSE
Length = 1150
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 22/97 (22%)
Query: 107 IGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGTESGEY 166
+GR I++N Y Y +L + +F G+ + L ++ ++
Sbjct: 1049 VGRSIDVNRYRGYDELRHDLARMF-GI---------------------EGQLEDPQTSDW 1086
Query: 167 TLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
LVY D E D +LVGD PW+ FV+ + +++L S+E+
Sbjct: 1087 KLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEV 1123
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1164
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 22/97 (22%)
Query: 107 IGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGTESGEY 166
+GR I++N Y Y +L + +F G+ + L ++ ++
Sbjct: 1048 VGRSIDVNRYRGYDELRHDLARMF-GI---------------------EGQLEDPQTSDW 1085
Query: 167 TLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
LVY D E D +LVGD PW+ FV+ + +++L S+E+
Sbjct: 1086 KLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEV 1122
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1165
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 22/97 (22%)
Query: 107 IGRKINLNAYDSYQKLSVAIDELFRGLLAAQRETCEARNVNKIDVAKGDAGLTGTESGEY 166
+GR I++N Y Y +L + +F G+ + L ++ ++
Sbjct: 1049 VGRSIDVNRYRGYDELRHDLARMF-GI---------------------EGQLEDPQTSDW 1086
Query: 167 TLVYQDSEGDTILVGDVPWQMFVSTAKRLRVLKSSEL 203
LVY D E D +LVGD PW+ FV+ + +++L S+E+
Sbjct: 1087 KLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEV 1123