Jatropha Genome Database

JcCA0116921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116921.10 - phase: 0 /partial
         (195 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G50950.1 | Symbols:  | fumarate hydratase, putative / fumaras...   316   5e-87
AT5G50950.2 | Symbols:  | fumarate hydratase, putative / fumaras...   315   1e-86
AT5G50950.3 | Symbols:  | fumarate hydratase, putative / fumaras...   313   4e-86
AT2G47510.2 | Symbols: FUM1 | FUM1 (FUMARASE 1); catalytic/ fuma...   299   7e-82
AT2G47510.1 | Symbols: FUM1 | FUM1 (FUMARASE 1); catalytic/ fuma...   299   7e-82

>AT5G50950.1 | Symbols:  | fumarate hydratase, putative / fumarase,
           putative | chr5:20729687-20733476 FORWARD
          Length = 510

 Score =  316 bits (810), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 151/169 (89%), Positives = 161/169 (95%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDA VE+SG+LNTIATSLMK+ANDIR LGSGPRCGLGEL LPENEPGSSIMPGKVNPT
Sbjct: 304 AAHDACVETSGSLNTIATSLMKIANDIRFLGSGPRCGLGELSLPENEPGSSIMPGKVNPT 363

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVA+T+GGSNGHFELNVFKP+IAS LLHS+RL+ DASASFEKNCV
Sbjct: 364 QCEALTMVCAQVMGNHVAVTIGGSNGHFELNVFKPVIASALLHSIRLIADASASFEKNCV 423

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLKV 169
           RGI+ANRERISKLLHESLMLVT+LNPKIGYDNAAAVAK AHKEG TLKV
Sbjct: 424 RGIEANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKRAHKEGCTLKV 472


>AT5G50950.2 | Symbols:  | fumarate hydratase, putative / fumarase,
           putative | chr5:20729687-20733636 FORWARD
          Length = 499

 Score =  315 bits (806), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/168 (89%), Positives = 160/168 (95%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDA VE+SG+LNTIATSLMK+ANDIR LGSGPRCGLGEL LPENEPGSSIMPGKVNPT
Sbjct: 304 AAHDACVETSGSLNTIATSLMKIANDIRFLGSGPRCGLGELSLPENEPGSSIMPGKVNPT 363

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVA+T+GGSNGHFELNVFKP+IAS LLHS+RL+ DASASFEKNCV
Sbjct: 364 QCEALTMVCAQVMGNHVAVTIGGSNGHFELNVFKPVIASALLHSIRLIADASASFEKNCV 423

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLK 168
           RGI+ANRERISKLLHESLMLVT+LNPKIGYDNAAAVAK AHKEG TLK
Sbjct: 424 RGIEANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKRAHKEGCTLK 471


>AT5G50950.3 | Symbols:  | fumarate hydratase, putative / fumarase,
           putative | chr5:20729999-20733636 FORWARD
          Length = 423

 Score =  313 bits (802), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 150/168 (89%), Positives = 160/168 (95%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDA VE+SG+LNTIATSLMK+ANDIR LGSGPRCGLGEL LPENEPGSSIMPGKVNPT
Sbjct: 228 AAHDACVETSGSLNTIATSLMKIANDIRFLGSGPRCGLGELSLPENEPGSSIMPGKVNPT 287

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVA+T+GGSNGHFELNVFKP+IAS LLHS+RL+ DASASFEKNCV
Sbjct: 288 QCEALTMVCAQVMGNHVAVTIGGSNGHFELNVFKPVIASALLHSIRLIADASASFEKNCV 347

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLK 168
           RGI+ANRERISKLLHESLMLVT+LNPKIGYDNAAAVAK AHKEG TLK
Sbjct: 348 RGIEANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKRAHKEGCTLK 395


>AT2G47510.2 | Symbols: FUM1 | FUM1 (FUMARASE 1); catalytic/
           fumarate hydratase | chr2:19498614-19502020 FORWARD
          Length = 492

 Score =  299 bits (766), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 152/168 (90%), Positives = 161/168 (95%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDA VE+SG+LNTIATSLMK+ANDIR LGSGPRCGLGEL+LPENEPGSSIMPGKVNPT
Sbjct: 297 AAHDACVETSGSLNTIATSLMKIANDIRFLGSGPRCGLGELVLPENEPGSSIMPGKVNPT 356

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVA+TVGGSNGHFELNVFKP+IAS LLHSVRL+ DASASFEKNCV
Sbjct: 357 QCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVIASALLHSVRLIADASASFEKNCV 416

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLK 168
           RGI+ANRERISKLLHESLMLVT+LNPKIGYDNAAAVAK AHKEG TLK
Sbjct: 417 RGIEANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGCTLK 464


>AT2G47510.1 | Symbols: FUM1 | FUM1 (FUMARASE 1); catalytic/
           fumarate hydratase | chr2:19498614-19502020 FORWARD
          Length = 492

 Score =  299 bits (766), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 152/168 (90%), Positives = 161/168 (95%)

Query: 1   AAHDAFVESSGALNTIATSLMKVANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 60
           AAHDA VE+SG+LNTIATSLMK+ANDIR LGSGPRCGLGEL+LPENEPGSSIMPGKVNPT
Sbjct: 297 AAHDACVETSGSLNTIATSLMKIANDIRFLGSGPRCGLGELVLPENEPGSSIMPGKVNPT 356

Query: 61  QCEALTMVCAQGMGNHVAITVGGSNGHFELNVFKPMIASNLLHSVRLLGDASASFEKNCV 120
           QCEALTMVCAQ MGNHVA+TVGGSNGHFELNVFKP+IAS LLHSVRL+ DASASFEKNCV
Sbjct: 357 QCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVIASALLHSVRLIADASASFEKNCV 416

Query: 121 RGIQANRERISKLLHESLMLVTALNPKIGYDNAAAVAKLAHKEGSTLK 168
           RGI+ANRERISKLLHESLMLVT+LNPKIGYDNAAAVAK AHKEG TLK
Sbjct: 417 RGIEANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGCTLK 464