Jatropha Genome Database

JcCA0116171.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116171.10 - phase: 0 
         (268 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G13560.1 | Symbols:  | malate oxidoreductase, putative | chr2...   404   e-113
AT4G00570.1 | Symbols:  | malate oxidoreductase, putative | chr4...   327   5e-90
AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzym...   192   2e-49
AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzym...   192   3e-49
AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzym...   189   2e-48
AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzym...   187   6e-48

>AT2G13560.1 | Symbols:  | malate oxidoreductase, putative |
           chr2:5650089-5655103 FORWARD
          Length = 623

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/227 (85%), Positives = 200/227 (88%), Gaps = 2/227 (0%)

Query: 33  RSFTTTEGHRPTIVHKRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQQIER 92
           RSFTT+EGHRPTIVHK+ LDILHDPWFNKGTAF+MTE          PPNVM  EQQI R
Sbjct: 29  RSFTTSEGHRPTIVHKQGLDILHDPWFNKGTAFTMTERNRLDLRGLLPPNVMDSEQQIFR 88

Query: 93  FMADLKRLEVHARDGPSDPNYLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVG 152
           FM DLKRLE  ARDGPSDPN LAKWRILNRLHDRNETMYYKVLI NIEEYAPIVYTPTVG
Sbjct: 89  FMTDLKRLEEQARDGPSDPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVG 148

Query: 153 LVCQNYSGLFRRPRGMYFSAADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGI 212
           LVCQNYSGLFRRPRGMYFSA DRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGV GI
Sbjct: 149 LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGI 208

Query: 213 GIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKNPLCKYFSVQ 259
           GIA+GKLDLYVAAAGINPQRVLPVMIDVGTNNEKL  +P+  Y  +Q
Sbjct: 209 GIAVGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLRNDPM--YLGLQ 253


>AT4G00570.1 | Symbols:  | malate oxidoreductase, putative |
           chr4:242817-246522 REVERSE
          Length = 607

 Score =  327 bits (837), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 156/231 (67%), Positives = 181/231 (78%), Gaps = 2/231 (0%)

Query: 29  TQTSRSFTTTEGHRPTIVHKRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQ 88
           T  SR   +T    P IVHKR  DILHDPWFNK T F +TE          PP VM+  Q
Sbjct: 18  THGSRRCFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVMTCVQ 77

Query: 89  QIERFMADLKRLEVHARDGPSDPNYLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYT 148
           Q +RF+   + LE + +  P +   LAKWR+LNRLHDRNET+YY+VLI NI+++API+YT
Sbjct: 78  QCDRFIESFRSLENNTKGEPENVVALAKWRMLNRLHDRNETLYYRVLIDNIKDFAPIIYT 137

Query: 149 PTVGLVCQNYSGLFRRPRGMYFSAADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLG 208
           PTVGLVCQNYSGL+RRPRGMYFSA D+GEMMSM+YNWPA QVDMIV+TDGSRILGLGDLG
Sbjct: 138 PTVGLVCQNYSGLYRRPRGMYFSAKDKGEMMSMIYNWPAPQVDMIVITDGSRILGLGDLG 197

Query: 209 VQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKNPLCKYFSVQ 259
           VQGIGI IGKLD+YVAAAGINPQRVLP+M+DVGTNNEKLL+N L  Y  V+
Sbjct: 198 VQGIGIPIGKLDMYVAAAGINPQRVLPIMLDVGTNNEKLLQNDL--YLGVR 246


>AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzyme
           1); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr2:8592106-8595403
           REVERSE
          Length = 581

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 138/241 (57%), Gaps = 20/241 (8%)

Query: 20  QKMTNPDVLTQTSRSFTTTEGH-RPTIVH---------KRSLDILHDPWFNKGTAFSMTE 69
           +K+TN D+ +          G    TI H              +L DP +NKG AF+  E
Sbjct: 2   EKVTNSDLKSSVDGGVVDVYGEDSATIEHNITPWSLSVSSGYSLLRDPRYNKGLAFTEKE 61

Query: 70  XXXXXXXXXXPPNVMSPEQQIERFMADLKRLEVHARDGPSDPNYLAKWRILNRLHDRNET 129
                     PP V+  + Q +R + ++++ +            L K+  L  L +RNE 
Sbjct: 62  RDTHYLRGLLPPVVLDQKLQEKRLLNNIRQYQFP----------LQKYMALTELQERNER 111

Query: 130 MYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAADRGEMMSMVYNWPAEQ 189
           ++YK+LI N+EE  PIVYTPTVG  CQ +  +FRRP+G++ S  D+G+++ ++ NWP   
Sbjct: 112 LFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGLFISLKDKGKILDVLKNWPERN 171

Query: 190 VDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLK 249
           + +IVVTDG RILGLGDLG QG+GI +GKL LY A  G+ P   LPV IDVGTNNEKLL 
Sbjct: 172 IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYSALGGVRPSACLPVTIDVGTNNEKLLN 231

Query: 250 N 250
           +
Sbjct: 232 D 232


>AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzyme
           3); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr5:9024549-9028260
           FORWARD
          Length = 588

 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 92/198 (46%), Positives = 126/198 (63%), Gaps = 10/198 (5%)

Query: 53  ILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQQIERFMADLKRLEVHARDGPSDPN 112
           ++ DP +NKG AF+  E          PP V+S + Q  + M +L++  V          
Sbjct: 52  LMRDPRYNKGLAFTDKERDAHYITGLLPPVVLSQDVQERKVMHNLRQYTVP--------- 102

Query: 113 YLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSA 172
            L ++  L  L +RNE ++YK+LI N+EE  P+VYTPTVG  CQ Y  ++RRP+G+Y S 
Sbjct: 103 -LQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISL 161

Query: 173 ADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQR 232
            ++G+++ ++ NWP   + +IVVTDG RILGLGDLG QG+GI +GKL LY A  GI P  
Sbjct: 162 KEKGKILEVLKNWPQRGIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSA 221

Query: 233 VLPVMIDVGTNNEKLLKN 250
            LP+ IDVGTNNEKLL N
Sbjct: 222 CLPITIDVGTNNEKLLNN 239


>AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzyme
           2); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr5:3754456-3758040
           FORWARD
          Length = 588

 Score =  189 bits (479), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 126/198 (63%), Gaps = 10/198 (5%)

Query: 53  ILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQQIERFMADLKRLEVHARDGPSDPN 112
           ++ DP +NKG AF+  E          PP ++S + Q  + M +L++  V          
Sbjct: 52  LMRDPRYNKGLAFTDKERDAHYLTGLLPPVILSQDVQERKVMHNLRQYTVP--------- 102

Query: 113 YLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSA 172
            L ++  L  L +RNE ++YK+LI N+EE  P+VYTPTVG  CQ Y  +FR+P+G+Y S 
Sbjct: 103 -LQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRKPQGLYISL 161

Query: 173 ADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQR 232
            ++G+++ ++ NWP   + +IVVTDG RILGLGDLG QG+GI +GKL LY A  GI P  
Sbjct: 162 NEKGKILEVLKNWPQRGIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSA 221

Query: 233 VLPVMIDVGTNNEKLLKN 250
            LP+ IDVGTNNEKLL +
Sbjct: 222 CLPITIDVGTNNEKLLND 239


>AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzyme
           4); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr1:30007655-30011179
           REVERSE
          Length = 646

 Score =  187 bits (475), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 89/198 (44%), Positives = 125/198 (63%), Gaps = 10/198 (5%)

Query: 53  ILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSPEQQIERFMADLKRLEVHARDGPSDPN 112
           +L DP  NKG AFS  E          PP V+S + Q+++ M  L++ +V          
Sbjct: 110 LLRDPHHNKGLAFSHRERDAHYLRGLLPPTVISQDLQVKKIMHTLRQYQVP--------- 160

Query: 113 YLAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSA 172
            L K+  +  L + NE ++YK+LI ++EE  P++YTPTVG  CQ Y  +F RP+G++ S 
Sbjct: 161 -LQKYMAMMDLQETNERLFYKLLIDHVEELLPVIYTPTVGEACQKYGSIFLRPQGLFISL 219

Query: 173 ADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQR 232
            ++G++  ++ NWP + + +IVVTDG RILGLGDLG QG+GI +GKL LY A  G+ P  
Sbjct: 220 KEKGKIHEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSA 279

Query: 233 VLPVMIDVGTNNEKLLKN 250
            LPV IDVGTNNEKLL +
Sbjct: 280 CLPVTIDVGTNNEKLLND 297