Jatropha Genome Database

JcCA0116061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0116061.10 - phase: 0 /partial
         (180 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51880.1 | Symbols:  | iron ion binding / oxidoreductase, act...   204   2e-53

>AT5G51880.1 | Symbols:  | iron ion binding / oxidoreductase, acting
           on paired donors, with incorporation or reduction of
           molecular oxygen, 2-oxoglutarate as one donor, and
           incorporation of one atom each of oxygen into both
           donors | chr5:21089395-21090775 FORWARD
          Length = 250

 Score =  204 bits (520), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 98/145 (67%), Positives = 112/145 (77%), Gaps = 1/145 (0%)

Query: 24  GKNSSSKTKWPLIKPKKNLQITRIKDTDLFTVQNFFTPAESKAFIKAAESIGFVHQGSLG 83
           G N  S  KWP IK K NL ++ +K+ DLFTV+N  T  ESKAF+K AES+GF HQGS G
Sbjct: 25  GDNGES-IKWPKIKLKSNLNVSYLKNHDLFTVENCLTSDESKAFVKIAESLGFTHQGSRG 83

Query: 84  PTRGEAYRDNDRVSSNDSALANAVWESGLNKLFSDIKIRGKVAVGLNPNIRFYRYKVGQR 143
           P  GEAYRDN R+S ND  LA+ +W+SGL+ LF+DIKIR KVAVGLNPNIRFYRY  GQ 
Sbjct: 84  PAYGEAYRDNHRISVNDPVLADTLWQSGLSNLFTDIKIRRKVAVGLNPNIRFYRYSAGQH 143

Query: 144 FGRHIDESVDLGDGKRTHYTLLIYL 168
           FGRHIDES DL DG RT+YTLLIYL
Sbjct: 144 FGRHIDESADLEDGNRTYYTLLIYL 168