Jatropha Genome Database

JcCA0113151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0113151.10 + phase: 1 /partial
         (296 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzym...   504   e-143
AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzym...   489   e-139
AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzym...   488   e-138
AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzym...   479   e-136
AT2G13560.1 | Symbols:  | malate oxidoreductase, putative | chr2...   234   6e-62
AT4G00570.1 | Symbols:  | malate oxidoreductase, putative | chr4...   219   1e-57

>AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzyme
           4); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr1:30007655-30011179
           REVERSE
          Length = 646

 Score =  504 bits (1297), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 237/291 (81%), Positives = 264/291 (90%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +G+I EVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGGVRPSACL
Sbjct: 222 KGKIHEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACL 281

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           PVTIDVGTNNEKLLNDEFYIGLRQRRATG+EYSEL+HEFMTAVK+NYGE++++QFEDFAN
Sbjct: 282 PVTIDVGTNNEKLLNDEFYIGLRQRRATGEEYSELMHEFMTAVKQNYGEKVVIQFEDFAN 341

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXDHKFLFLGAGEAGTGI 185
           HNAFDLLAKYGTTHLVFNDDIQGTASVV                DH+FLFLGAGEAGTGI
Sbjct: 342 HNAFDLLAKYGTTHLVFNDDIQGTASVVLAGLIAALRFVGGSLSDHRFLFLGAGEAGTGI 401

Query: 186 AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPMKTLLDA 245
           AELIALE+SK++++P+EE RK IWLVDSKGLIVSSR +S+QHFKKPWAHDHEP++ L+DA
Sbjct: 402 AELIALEISKKSHIPLEEARKNIWLVDSKGLIVSSRKESIQHFKKPWAHDHEPIRELVDA 461

Query: 246 VNDIKPTVLIGTSGVGRTFTKEVVEAMASFYERPIILALSNPTSQSECTAE 296
           V  IKPTVLIGTSGVG+TFT++VVE MA   E+PIIL+LSNPTSQSECTAE
Sbjct: 462 VKAIKPTVLIGTSGVGQTFTQDVVETMAKLNEKPIILSLSNPTSQSECTAE 512


>AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzyme
           1); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr2:8592106-8595403
           REVERSE
          Length = 581

 Score =  489 bits (1260), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 232/291 (79%), Positives = 260/291 (89%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +G+IL+VL+NWPE+NIQVIVVTDGERILGLGDLGCQGMGIPVGKLALY+ALGGVRPSACL
Sbjct: 157 KGKILDVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYSALGGVRPSACL 216

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           PVTIDVGTNNEKLLNDEFYIGLRQ+RATGQEYSELL+EFM+AVK+NYGE++L+QFEDFAN
Sbjct: 217 PVTIDVGTNNEKLLNDEFYIGLRQKRATGQEYSELLNEFMSAVKQNYGEKVLIQFEDFAN 276

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXDHKFLFLGAGEAGTGI 185
           HNAF+LLAKY  THLVFNDDIQGTASVV                +H FLFLGAGEAGTGI
Sbjct: 277 HNAFELLAKYSDTHLVFNDDIQGTASVVLAGLVSAQKLTNSPLAEHTFLFLGAGEAGTGI 336

Query: 186 AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPMKTLLDA 245
           AELIAL MSK+ N  VEE+RKKIWLVDSKGLIV+SR DSLQ FKKPWAH+HEP+K LL A
Sbjct: 337 AELIALYMSKQMNASVEESRKKIWLVDSKGLIVNSRKDSLQDFKKPWAHEHEPVKDLLGA 396

Query: 246 VNDIKPTVLIGTSGVGRTFTKEVVEAMASFYERPIILALSNPTSQSECTAE 296
           +  IKPTVLIG+SGVGR+FTKEV+EAM+S  ERP+I+ALSNPT+QSECTAE
Sbjct: 397 IKAIKPTVLIGSSGVGRSFTKEVIEAMSSINERPLIMALSNPTTQSECTAE 447


>AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzyme
           2); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr5:3754456-3758040
           FORWARD
          Length = 588

 Score =  488 bits (1255), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 230/291 (79%), Positives = 259/291 (89%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +G+ILEVL+NWP++ IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACL
Sbjct: 164 KGKILEVLKNWPQRGIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACL 223

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           P+TIDVGTNNEKLLNDEFYIGL+QRRATGQEY+E LHEFM AVK+NYGE++LVQFEDFAN
Sbjct: 224 PITIDVGTNNEKLLNDEFYIGLKQRRATGQEYAEFLHEFMCAVKQNYGEKVLVQFEDFAN 283

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXDHKFLFLGAGEAGTGI 185
           HNAFDLL+KY  +HLVFNDDIQGTASVV                DH FLFLGAGEAGTGI
Sbjct: 284 HNAFDLLSKYSDSHLVFNDDIQGTASVVLAGLIAAQKVLGKKLADHTFLFLGAGEAGTGI 343

Query: 186 AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPMKTLLDA 245
           AELIAL++SKE   P+ ETRKKIWLVDSKGLIVSSR +SLQHFK+PWAH+H+P+K L+ A
Sbjct: 344 AELIALKISKETGAPITETRKKIWLVDSKGLIVSSRKESLQHFKQPWAHEHKPVKDLIGA 403

Query: 246 VNDIKPTVLIGTSGVGRTFTKEVVEAMASFYERPIILALSNPTSQSECTAE 296
           VN IKPTVLIGTSGVG+TFTKEVVEAMA+  E+P+ILALSNPTSQ+ECTAE
Sbjct: 404 VNAIKPTVLIGTSGVGQTFTKEVVEAMATNNEKPLILALSNPTSQAECTAE 454


>AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzyme
           3); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr5:9024549-9028260
           FORWARD
          Length = 588

 Score =  479 bits (1234), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 224/291 (76%), Positives = 258/291 (88%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +G+ILEVL+NWP++ IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACL
Sbjct: 164 KGKILEVLKNWPQRGIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACL 223

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           P+TIDVGTNNEKLLN+EFYIGL+Q+RA G+EY+E L EFM AVK+NYGE++LVQFEDFAN
Sbjct: 224 PITIDVGTNNEKLLNNEFYIGLKQKRANGEEYAEFLQEFMCAVKQNYGEKVLVQFEDFAN 283

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXDHKFLFLGAGEAGTGI 185
           H+AF+LL+KY ++HLVFNDDIQGTASVV                DH FLFLGAGEAGTGI
Sbjct: 284 HHAFELLSKYCSSHLVFNDDIQGTASVVLAGLIAAQKVLGKSLADHTFLFLGAGEAGTGI 343

Query: 186 AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPMKTLLDA 245
           AELIAL++SKE   P++ETRKKIWLVDSKGLIVS R +SLQHFK+PWAHDH+P+K LL A
Sbjct: 344 AELIALKISKETGKPIDETRKKIWLVDSKGLIVSERKESLQHFKQPWAHDHKPVKELLAA 403

Query: 246 VNDIKPTVLIGTSGVGRTFTKEVVEAMASFYERPIILALSNPTSQSECTAE 296
           VN IKPTVLIGTSGVG+TFTKEVVEAMA+  E+P+ILALSNPTSQ+ECTAE
Sbjct: 404 VNAIKPTVLIGTSGVGKTFTKEVVEAMATLNEKPLILALSNPTSQAECTAE 454


>AT2G13560.1 | Symbols:  | malate oxidoreductase, putative |
           chr2:5650089-5655103 FORWARD
          Length = 623

 Score =  234 bits (596), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/306 (42%), Positives = 178/306 (58%), Gaps = 17/306 (5%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           RG ++ ++ NWP + + +IVVTDG RILGLGDLG  G+GI VGKL LY A  G+ P   L
Sbjct: 171 RGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGIAVGKLDLYVAAAGINPQRVL 230

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           PV IDVGTNNEKL ND  Y+GL+QRR    +Y +++ EFM AV   +   ++VQFEDF +
Sbjct: 231 PVMIDVGTNNEKLRNDPMYLGLQQRRLEDDDYIDVIDEFMEAVYTRW-PHVIVQFEDFQS 289

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXDH---KFLFLGAGEAG 182
             AF LL +Y  T+ +FNDD+QGTA V                 D    K +  GAG AG
Sbjct: 290 KWAFKLLQRYRCTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKMKIVVAGAGSAG 349

Query: 183 TGI---AELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMDSLQHFKKPWAHDHEPM 239
            G+   A      M        +  + + W+VD++GLI   R +++    +P+A   + M
Sbjct: 350 IGVLNAARKTMARMLGNTETAFDSAQSQFWVVDAQGLITEGR-ENIDPEAQPFARKTKEM 408

Query: 240 K--------TLLDAVNDIKPTVLIGTSGVGRTFTKEVVEAM-ASFYERPIILALSNPTSQ 290
           +        TL++ V ++KP VL+G S VG  F+KEV+EAM  S   RP I A+SNPT  
Sbjct: 409 ERQGLKEGATLVEVVREVKPDVLLGLSAVGGLFSKEVLEAMKGSTSTRPAIFAMSNPTKN 468

Query: 291 SECTAE 296
           +ECT +
Sbjct: 469 AECTPQ 474


>AT4G00570.1 | Symbols:  | malate oxidoreductase, putative |
           chr4:242817-246522 REVERSE
          Length = 607

 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 119/297 (40%), Positives = 172/297 (57%), Gaps = 9/297 (3%)

Query: 6   RGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACL 65
           +G ++ ++ NWP   + +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G+ P   L
Sbjct: 164 KGEMMSMIYNWPAPQVDMIVITDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPQRVL 223

Query: 66  PVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYSELLHEFMTAVKKNYGERILVQFEDFAN 125
           P+ +DVGTNNEKLL ++ Y+G+RQ R  G+EY E++ EFM A    +  + +VQFEDF  
Sbjct: 224 PIMLDVGTNNEKLLQNDLYLGVRQPRLEGEEYLEIIDEFMEAAFTRW-PKAVVQFEDFQA 282

Query: 126 HNAFDLLAKYGTTHLVFNDDIQGTASVVXXXXXXXXXXXXXXXXD---HKFLFLGAGEAG 182
             AF  L +Y     +FNDD+QGTA V                 D    K + +GAG AG
Sbjct: 283 KWAFGTLERYRKKFCMFNDDVQGTAGVALAGLLGTVRAQGRPISDFVNQKIVVVGAGSAG 342

Query: 183 TGIAELIALEMSKENNMPVEETRKKIWLVDSKGLIVSSRMD---SLQHFKKPWAHDHEPM 239
            G+ ++    +++   +   E  K  +L+D  GL+ + R         F K  A   E  
Sbjct: 343 LGVTKMAVQAVARMAGISESEATKNFYLIDKDGLVTTERTKLDPGAVLFAKNPAEIREG- 401

Query: 240 KTLLDAVNDIKPTVLIGTSGVGRTFTKEVVEAM-ASFYERPIILALSNPTSQSECTA 295
            ++++ V  ++P VL+G SGVG  F +EV++AM  S   +P I A+SNPT  +ECTA
Sbjct: 402 ASIVEVVKKVRPHVLLGLSGVGGIFNEEVLKAMRESDSCKPAIFAMSNPTLNAECTA 458