Jatropha Genome Database
- JcCA0111951.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0111951.10 + phase: 0 /partial
(308 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63490.1 | Symbols: | CBS domain-containing protein / octico... 382 e-106
AT5G50530.1 | Symbols: | CBS domain-containing protein / octico... 375 e-104
AT5G50640.1 | Symbols: | CBS domain-containing protein / octico... 375 e-104
AT3G52950.1 | Symbols: | CBS domain-containing protein / octico... 327 4e-90
AT2G36500.1 | Symbols: | CBS domain-containing protein / octico... 315 3e-86
AT5G10860.1 | Symbols: | CBS domain-containing protein | chr5:3... 51 8e-07
AT1G47271.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 4e-06
>AT5G63490.1 | Symbols: | CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein | chr5:25418716-25421970 REVERSE
Length = 543
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/273 (70%), Positives = 227/273 (83%), Gaps = 3/273 (1%)
Query: 22 GRKKASENGG-GPDPSRKSFNSSR-PGGLTG-ERTVKRLRLSKALTVPESTSIYDACRRM 78
G+KK+ + G D R+S SR P GLTG ERTVKRLRLSKALTVP +T+IY+AC+RM
Sbjct: 20 GKKKSMDMAERGLDTGRRSLTVSRSPLGLTGGERTVKRLRLSKALTVPATTTIYEACKRM 79
Query: 79 AARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRNPVFVLSDTLAV 138
A+RRVDALLLTDSN +LCGILTDKDIATRVI++E+N+EETP+SKVMT+NP+FVLS+TLAV
Sbjct: 80 ASRRVDALLLTDSNEMLCGILTDKDIATRVISQELNVEETPVSKVMTKNPMFVLSETLAV 139
Query: 139 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERXXXXXXXXXXXXXXXXXNW 198
EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER +W
Sbjct: 140 EALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKSW 199
Query: 199 GTSFSGPNTFIETLRERMFRPSLSTIVPENSKVVTVSPTETVLAATKKMLEFRTSSAVVI 258
GT+ S PNTFIETLR+RMFRPSLSTI+P+++KV+ VSPT+TVL KKM+EF++S AVVI
Sbjct: 200 GTNTSVPNTFIETLRDRMFRPSLSTIIPDDTKVLKVSPTDTVLTVAKKMVEFQSSCAVVI 259
Query: 259 VDSKPRGILTSKDILMRVIAQNLPPDSTLVEKV 291
++ K RGI TSKDILMRV+A+NLPP TLVE V
Sbjct: 260 IEDKLRGIFTSKDILMRVVAENLPPSETLVETV 292
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%)
Query: 95 LCGILTDKDIATRVIAREVNLEETPISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPV 154
L GI T KDI RV+A + ET + VMT+NP + DT VEAL M +GKF HLPV
Sbjct: 264 LRGIFTSKDILMRVVAENLPPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPV 323
Query: 155 VE 156
+
Sbjct: 324 TD 325
>AT5G50530.1 | Symbols: | CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein | chr5:20571876-20574922 REVERSE
Length = 548
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/280 (68%), Positives = 226/280 (80%), Gaps = 10/280 (3%)
Query: 22 GRKKASENGGGPDPSRK----------SFNSSRPGGLTGERTVKRLRLSKALTVPESTSI 71
GRKKASEN GG + S G +GERTVKRLRL KALTVP+ST++
Sbjct: 21 GRKKASENEGGGGGGSDLLPRRSLTSSRSSISLSGERSGERTVKRLRLCKALTVPDSTTL 80
Query: 72 YDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRNPVFV 131
++ACRRMAARRVDALLLTDSNALLCGILTD+DIAT+VIA+++NLEETP+SKVMT+NPVFV
Sbjct: 81 FEACRRMAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVFV 140
Query: 132 LSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERXXXXXXXXXXXX 191
LSDT+AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER
Sbjct: 141 LSDTIAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERSVEKGKAIAAAV 200
Query: 192 XXXXXNWGTSFSGPNTFIETLRERMFRPSLSTIVPENSKVVTVSPTETVLAATKKMLEFR 251
NWGTS +GPNTF+ETLRER+F+PSLSTI+PEN+KV+ V ETVL T KM+E++
Sbjct: 201 EGVEKNWGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGLDETVLGVTMKMVEYQ 260
Query: 252 TSSAVVIVDSKPRGILTSKDILMRVIAQNLPPDSTLVEKV 291
+S+A+V+V++K GILTSKDILMRVI+QNLP ++T VEKV
Sbjct: 261 SSAAMVMVENKLVGILTSKDILMRVISQNLPQETTTVEKV 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 60 SKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETP 119
+K L V ++ +M + A ++ N L+ GILT KDI RVI++ + E T
Sbjct: 238 TKVLKVGLDETVLGVTMKMVEYQSSAAMVMVENKLV-GILTSKDILMRVISQNLPQETTT 296
Query: 120 ISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAI 174
+ KVMT NP D VEAL M GKF HLPV++ +G+V+A++D+ + A+
Sbjct: 297 VEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAV 352
>AT5G50640.1 | Symbols: | CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein | chr5:20605218-20608264 REVERSE
Length = 548
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/280 (68%), Positives = 226/280 (80%), Gaps = 10/280 (3%)
Query: 22 GRKKASENGGGPDPSRK----------SFNSSRPGGLTGERTVKRLRLSKALTVPESTSI 71
GRKKASEN GG + S G +GERTVKRLRL KALTVP+ST++
Sbjct: 21 GRKKASENEGGGGGGSDLLPRRSLTSSRSSISLSGERSGERTVKRLRLCKALTVPDSTTL 80
Query: 72 YDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRNPVFV 131
++ACRRMAARRVDALLLTDSNALLCGILTD+DIAT+VIA+++NLEETP+SKVMT+NPVFV
Sbjct: 81 FEACRRMAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVFV 140
Query: 132 LSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERXXXXXXXXXXXX 191
LSDT+AVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMER
Sbjct: 141 LSDTIAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERSVEKGKAIAAAV 200
Query: 192 XXXXXNWGTSFSGPNTFIETLRERMFRPSLSTIVPENSKVVTVSPTETVLAATKKMLEFR 251
NWGTS +GPNTF+ETLRER+F+PSLSTI+PEN+KV+ V ETVL T KM+E++
Sbjct: 201 EGVEKNWGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGLDETVLGVTMKMVEYQ 260
Query: 252 TSSAVVIVDSKPRGILTSKDILMRVIAQNLPPDSTLVEKV 291
+S+A+V+V++K GILTSKDILMRVI+QNLP ++T VEKV
Sbjct: 261 SSAAMVMVENKLVGILTSKDILMRVISQNLPQETTTVEKV 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 60 SKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETP 119
+K L V ++ +M + A ++ N L+ GILT KDI RVI++ + E T
Sbjct: 238 TKVLKVGLDETVLGVTMKMVEYQSSAAMVMVENKLV-GILTSKDILMRVISQNLPQETTT 296
Query: 120 ISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAI 174
+ KVMT NP D VEAL M GKF HLPV++ +G+V+A++D+ + A+
Sbjct: 297 VEKVMTPNPESATVDMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAV 352
>AT3G52950.1 | Symbols: | CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein | chr3:19634866-19636536 FORWARD
Length = 556
Score = 327 bits (839), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/289 (58%), Positives = 207/289 (71%), Gaps = 19/289 (6%)
Query: 22 GRKKASENGGGPDPSRK---SFNSSRPGGLT----------------GERTVKRLRLSKA 62
GR+ S GP PS+K S N S G + GERTVK+LRLSKA
Sbjct: 13 GRRSNSTVRRGPPPSKKPVQSENGSVNGNTSKPNSPPPQPQSQAPSNGERTVKKLRLSKA 72
Query: 63 LTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPISK 122
LT+PE T+++DACRRMAARRVDA LLTDS+ALL GI+TDKD+ATRVIA + ++T +SK
Sbjct: 73 LTIPEGTTVFDACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSK 132
Query: 123 VMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERXXX 182
VMTRNP+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIALLDI KCLYDAI+RME+
Sbjct: 133 VMTRNPIFVTSDSLALEALQKMVQGKFRHLPVVENGEVIALLDITKCLYDAISRMEKAAE 192
Query: 183 XXXXXXXXXXXXXXNWGTSFSGPNTFIETLRERMFRPSLSTIVPENSKVVTVSPTETVLA 242
WG+ +S P FIETLRERMF+P+LSTI+ +NSKV V+P++ V
Sbjct: 193 QGSALAAAVEGVEKQWGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAPSDPVSV 252
Query: 243 ATKKMLEFRTSSAVVIVDSKPRGILTSKDILMRVIAQNLPPDSTLVEKV 291
A K+M + R +S ++ +K GILTSKDILMRV+AQNL P+ TLVEKV
Sbjct: 253 AAKRMRDLRVNSVIISTGNKISGILTSKDILMRVVAQNLSPELTLVEKV 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 60 SKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETP 119
SK V S + A +RM RV++++++ N + GILT KDI RV+A+ ++ E T
Sbjct: 239 SKVALVAPSDPVSVAAKRMRDLRVNSVIISTGNKI-SGILTSKDILMRVVAQNLSPELTL 297
Query: 120 ISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARME 178
+ KVMT NP +T ++AL M GKF HLP+++ +G A +D+ + + AI+ +E
Sbjct: 298 VEKVMTPNPECASLETTILDALHTMHDGKFLHLPIIDKDGSAAACVDVLQITHAAISMVE 357
>AT2G36500.1 | Symbols: | CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein | chr2:15318473-15320083 FORWARD
Length = 536
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 191/242 (78%), Gaps = 5/242 (2%)
Query: 50 GERTVKRLRLSKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVI 109
GERTVK+LRLSKALT+ E T+++DACRRMAARRVDA+LLTDS+ALL GI+TDKDIATRVI
Sbjct: 58 GERTVKKLRLSKALTINEGTTVFDACRRMAARRVDAVLLTDSSALLSGIVTDKDIATRVI 117
Query: 110 AREVNLEETPISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKC 169
A + E T +SKVMTRNP+FV SD+LA+EALQKMVQGKFRHLPVVENGEVIALLDI KC
Sbjct: 118 AEGLRPEHTLVSKVMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGEVIALLDITKC 177
Query: 170 LYDAIARMERXXXXXXXXXXXXXXXXXNWGTSFSGPNTFIETLRERMFRPSLSTIVPENS 229
LYDAI+RME+ +WG SG FI+TLRERMF+P+LSTIV EN+
Sbjct: 178 LYDAISRMEK--AAEQGSALATAVEERHWG---SGNFAFIDTLRERMFKPALSTIVTENT 232
Query: 230 KVVTVSPTETVLAATKKMLEFRTSSAVVIVDSKPRGILTSKDILMRVIAQNLPPDSTLVE 289
KV VS ++ V A+KKM + R +S ++ V +K GILTSKDILMRV+AQNL P+ TLVE
Sbjct: 233 KVALVSASDPVFVASKKMRDLRVNSVIIAVGNKIHGILTSKDILMRVVAQNLSPELTLVE 292
Query: 290 KV 291
KV
Sbjct: 293 KV 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 60 SKALTVPESTSIYDACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETP 119
+K V S ++ A ++M RV+++++ N + GILT KDI RV+A+ ++ E T
Sbjct: 232 TKVALVSASDPVFVASKKMRDLRVNSVIIAVGNKI-HGILTSKDILMRVVAQNLSPELTL 290
Query: 120 ISKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARME 178
+ KVMT NP +T ++AL M GKF HLPV + +G +A LD+ + + AI+ +E
Sbjct: 291 VEKVMTPNPECASIETTILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHAAISTVE 350
>AT5G10860.1 | Symbols: | CBS domain-containing protein |
chr5:3429173-3430142 REVERSE
Length = 206
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 70 SIYDACRRMAARRVDALLLT--DSNALLCGILTDKDIATRVIAREVNLEETPISKVMTRN 127
++YDA + M V AL++ L GI+T++D ++I + + + T + +MT
Sbjct: 80 TVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 139
Query: 128 P--VFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCL 170
+ V +T + A+Q M + RH+PV+++ +I ++ I +
Sbjct: 140 NKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVV 184
>AT1G47271.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cystathionine beta-synthase, core (InterPro:IPR000644);
BEST Arabidopsis thaliana protein match is: CBS
domain-containing protein (TAIR:AT5G10860.1); Has 5358
Blast hits to 5270 proteins in 1084 species: Archae -
620; Bacteria - 3536; Metazoa - 1; Fungi - 100; Plants -
159; Viruses - 0; Other Eukaryotes - 942 (source: NCBI
BLink). | chr1:17328856-17330343 FORWARD
Length = 193
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 70 SIYDACRRMAARRVDALLLTD--SNALLCGILTDKDIATRVIAREVNLEETPISKVMTRN 127
++ DA + MA + +L++ + + GI+T++D ++I + + T + +VMT
Sbjct: 67 TVSDAVKNMAKHNIGSLVVLEPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGEVMTDE 126
Query: 128 P--VFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALL---DIAKCLYD 172
V V S T ++A+Q M + RH+PV++ G+++ L+ D+ K + D
Sbjct: 127 SKLVTVSSGTNIIKAMQLMSENHIRHVPVID-GKIVGLISMVDVVKAIVD 175