Jatropha Genome Database

JcCA0109021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0109021.10 + phase: 0 
         (122 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19910.1 | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | AVA-P2; ATPas...   164   1e-41
AT1G75630.1 | Symbols: AVA-P4 | AVA-P4; ATPase | chr1:28400662-2...   164   1e-41
AT4G34720.1 | Symbols: AVA-P1, VHA-C1, ATVHA-C1 | AVA-P1; ATPase...   161   9e-41
AT4G38920.1 | Symbols: AVA-P3, ATVHA-C3 | ATVHA-C3 (VACUOLAR-TYP...   161   9e-41
AT2G16510.1 | Symbols:  | vacuolar ATP synthase 16 kDa proteolip...   161   9e-41

>AT1G19910.1 | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | AVA-P2; ATPase/
           proton-transporting ATPase, rotational mechanism |
           chr1:6913317-6914322 FORWARD
          Length = 165

 Score =  164 bits (416), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 91/122 (74%)

Query: 1   MATGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MA+ FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VR 122
           VR
Sbjct: 121 VR 122


>AT1G75630.1 | Symbols: AVA-P4 | AVA-P4; ATPase |
           chr1:28400662-28402032 FORWARD
          Length = 166

 Score =  164 bits (415), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 89/121 (73%), Positives = 91/121 (75%)

Query: 2   ATGFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 61
           ++GFSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 3   SSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 62

Query: 62  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 121
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGV
Sbjct: 63  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 122

Query: 122 R 122
           R
Sbjct: 123 R 123


>AT4G34720.1 | Symbols: AVA-P1, VHA-C1, ATVHA-C1 | AVA-P1; ATPase/
           proton-transporting ATPase, rotational mechanism |
           chr4:16568223-16569165 REVERSE
          Length = 164

 Score =  161 bits (407), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 88/118 (74%)

Query: 5   FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 64
           FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 4   FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63

Query: 65  LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 122
           LGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct: 64  LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121


>AT4G38920.1 | Symbols: AVA-P3, ATVHA-C3 | ATVHA-C3 (VACUOLAR-TYPE
           H(+)-ATPASE C3); ATPase | chr4:18147330-18148853 FORWARD
          Length = 164

 Score =  161 bits (407), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 88/118 (74%)

Query: 5   FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 64
           FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 4   FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63

Query: 65  LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 122
           LGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct: 64  LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121


>AT2G16510.1 | Symbols:  | vacuolar ATP synthase 16 kDa proteolipid
           subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
           (AVAP5) | chr2:7160007-7160811 REVERSE
          Length = 164

 Score =  161 bits (407), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 88/118 (74%)

Query: 5   FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 64
           FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 4   FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63

Query: 65  LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 122
           LGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVR
Sbjct: 64  LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121