Jatropha Genome Database

JcCA0103521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0103521.10 + phase: 0 
         (114 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33355.2 | Symbols:  | lipid binding | chr4:16067097-16067450...    96   6e-21
AT4G33355.1 | Symbols:  | lipid binding | chr4:16067097-16067568...    94   1e-20
AT3G51590.1 | Symbols: LTP12 | LTP12 (LIPID TRANSFER PROTEIN 12)...    84   2e-17
AT2G15050.3 | Symbols: LTP | LTP; lipid binding | chr2:6518888-6...    82   1e-16
AT2G15050.1 | Symbols: LTP | LTP; lipid binding | chr2:6518888-6...    81   1e-16
AT5G59320.1 | Symbols: LTP3 | LTP3 (LIPID TRANSFER PROTEIN 3); l...    80   2e-16
AT2G15050.2 | Symbols: LTP | LTP; lipid binding | chr2:6518888-6...    80   4e-16
AT5G59310.1 | Symbols: LTP4 | LTP4 (LIPID TRANSFER PROTEIN 4); l...    78   1e-15
AT2G38540.1 | Symbols: LP1, LTP1, ATLTP1 | LP1; calmodulin bindi...    77   2e-15
AT3G51600.1 | Symbols: LTP5 | LTP5 (Lipid transfer protein 5); l...    72   8e-14
AT2G38530.1 | Symbols: LTP2, LP2 | LTP2 (LIPID TRANSFER PROTEIN ...    69   5e-13
AT5G01870.1 | Symbols:  | lipid transfer protein, putative | chr...    59   6e-10
AT2G18370.1 | Symbols:  | protease inhibitor/seed storage/lipid ...    58   1e-09
AT3G08770.1 | Symbols: LTP6 | LTP6; lipid binding | chr3:2664349...    56   4e-09
AT5G44265.1 | Symbols:  | lipid binding | chr5:17832779-17833316...    47   2e-06

>AT4G33355.2 | Symbols:  | lipid binding | chr4:16067097-16067450
           FORWARD
          Length = 117

 Score = 95.5 bits (236), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 1/97 (1%)

Query: 18  MAMPGEAVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVK 77
           +A  GEA+ C QVN  LA C+P+L  A   PS  CC G+ +LKA AP  ADR+ AC+C+K
Sbjct: 22  IAYHGEAIACPQVNMYLAQCLPYLK-AGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLK 80

Query: 78  AAASHYPNINEDSASSLPKKCGVEVTIPISKNTNCQK 114
           + A+  P IN+D A  LP KCGV + +P SK  +C +
Sbjct: 81  SVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNR 117


>AT4G33355.1 | Symbols:  | lipid binding | chr4:16067097-16067568
           FORWARD
          Length = 119

 Score = 94.4 bits (233), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 1/96 (1%)

Query: 18  MAMPGEAVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVK 77
           +A  GEA+ C QVN  LA C+P+L  A   PS  CC G+ +LKA AP  ADR+ AC+C+K
Sbjct: 22  IAYHGEAIACPQVNMYLAQCLPYLK-AGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLK 80

Query: 78  AAASHYPNINEDSASSLPKKCGVEVTIPISKNTNCQ 113
           + A+  P IN+D A  LP KCGV + +P SK  +C 
Sbjct: 81  SVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCN 116


>AT3G51590.1 | Symbols: LTP12 | LTP12 (LIPID TRANSFER PROTEIN 12);
           lipid binding | chr3:19135828-19136654 REVERSE
          Length = 119

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 18  MAMPGEA-VDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCV 76
           MA P E+ + CG V S+LA C+ +LT +   PS  CC GVK+L  LA TT DR+  C+C+
Sbjct: 18  MASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECL 76

Query: 77  KAAASHYPNINEDSASSLPKKCGVEVTIPISKNTNC 112
           K A      +N D  ++LP  CGV +  PIS +TNC
Sbjct: 77  KLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNC 112


>AT2G15050.3 | Symbols: LTP | LTP; lipid binding |
           chr2:6518888-6519888 FORWARD
          Length = 122

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 4/94 (4%)

Query: 24  AVDCGQVNSSLAPCIPFLT-GADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH 82
           A+ CG+VNS+L PC  +LT G  T+P   CC GV+ L  +  TT DRR AC C+K AA +
Sbjct: 26  ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARN 85

Query: 83  Y-PNINEDSASSLPKKCGVEV--TIPISKNTNCQ 113
             P +N D A+ +P++CG+++  +  I  NT C 
Sbjct: 86  VGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119


>AT2G15050.1 | Symbols: LTP | LTP; lipid binding |
           chr2:6518888-6519259 FORWARD
          Length = 123

 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 4/94 (4%)

Query: 24  AVDCGQVNSSLAPCIPFLT-GADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH 82
           A+ CG+VNS+L PC  +LT G  T+P   CC GV+ L  +  TT DRR AC C+K AA +
Sbjct: 26  ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARN 85

Query: 83  Y-PNINEDSASSLPKKCGVEV--TIPISKNTNCQ 113
             P +N D A+ +P++CG+++  +  I  NT C 
Sbjct: 86  VGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119


>AT5G59320.1 | Symbols: LTP3 | LTP3 (LIPID TRANSFER PROTEIN 3);
           lipid binding | chr5:23929051-23929492 FORWARD
          Length = 115

 Score = 80.1 bits (196), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 24  AVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
           A+ CG V  SLAPC  +L+     P  +CC GVK L ++A TT DR+ AC C+++ A   
Sbjct: 24  AISCGTVAGSLAPCATYLSKGGLVP-PSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSI 82

Query: 84  PNINEDSASSLPKKCGVEVTIPISKNTNCQ 113
             +N   AS LP KCGV +  PIS +TNC 
Sbjct: 83  SGLNPSLASGLPGKCGVSIPYPISMSTNCN 112


>AT2G15050.2 | Symbols: LTP | LTP; lipid binding |
           chr2:6518888-6519888 FORWARD
          Length = 115

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 2/81 (2%)

Query: 24  AVDCGQVNSSLAPCIPFLT-GADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH 82
           A+ CG+VNS+L PC  +LT G  T+P   CC GV+ L  +  TT DRR AC C+K AA +
Sbjct: 26  ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARN 85

Query: 83  Y-PNINEDSASSLPKKCGVEV 102
             P +N D A+ +P++CG+++
Sbjct: 86  VGPGLNADRAAGIPRRCGIKI 106


>AT5G59310.1 | Symbols: LTP4 | LTP4 (LIPID TRANSFER PROTEIN 4);
           lipid binding | chr5:23925296-23925772 REVERSE
          Length = 112

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 4/89 (4%)

Query: 24  AVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
           A+ CG V SSL+PC+ +L+     P   CC GVK L  +A TT DR+ AC C+++AA   
Sbjct: 24  AITCGTVASSLSPCLGYLSKGGVVPPP-CCAGVKKLNGMAQTTPDRQQACRCLQSAAK-- 80

Query: 84  PNINEDSASSLPKKCGVEVTIPISKNTNC 112
             +N   AS LP KCGV +  PIS +TNC
Sbjct: 81  -GVNPSLASGLPGKCGVSIPYPISTSTNC 108


>AT2G38540.1 | Symbols: LP1, LTP1, ATLTP1 | LP1; calmodulin binding
           | chr2:16130418-16130893 FORWARD
          Length = 118

 Score = 76.6 bits (187), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 2/91 (2%)

Query: 24  AVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
           A+ CG VNS+LA CI ++      P A CC GVKNL ++A TT DR+ AC+C++ AA   
Sbjct: 26  ALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARAL 84

Query: 84  -PNINEDSASSLPKKCGVEVTIPISKNTNCQ 113
              +N   A+ +PK CGV +   IS +TNC+
Sbjct: 85  GSGLNAGRAAGIPKACGVNIPYKISTSTNCK 115


>AT3G51600.1 | Symbols: LTP5 | LTP5 (Lipid transfer protein 5);
           lipid transporter | chr3:19138661-19139124 REVERSE
          Length = 118

 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 24  AVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
           A+ CG V  SL  C  +LT     P   CC GV+ L +LA TT DR+ AC C++ AA   
Sbjct: 26  AISCGAVTGSLGQCYNYLTRGGFIPRG-CCSGVQRLNSLARTTRDRQQACRCIQGAARAL 84

Query: 84  -PNINEDSASSLPKKCGVEVTIPISKNTNC 112
              +N   A+ LP  C V ++ PIS  TNC
Sbjct: 85  GSRLNAGRAARLPGACRVRISYPISARTNC 114


>AT2G38530.1 | Symbols: LTP2, LP2 | LTP2 (LIPID TRANSFER PROTEIN 2);
           lipid binding | chr2:16128481-16128948 FORWARD
          Length = 118

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 25  VDCGQVNSSLAPCIPFLTGADTAP-SAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
           + CG VN +LA CI +LT    AP +  CC GV NLK +A TT DR+ AC C+++AA   
Sbjct: 27  MSCGTVNGNLAGCIAYLT--RGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAV 84

Query: 84  -PNINEDSASSLPKKCGVEVTIPISKNTNCQ 113
            P +N   A+ LP  C V +   IS +TNC 
Sbjct: 85  GPGLNTARAAGLPSACKVNIPYKISASTNCN 115


>AT5G01870.1 | Symbols:  | lipid transfer protein, putative |
           chr5:337234-337678 FORWARD
          Length = 116

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)

Query: 24  AVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH- 82
           A+ C  V ++L PC+ ++      P + CC G++ L   A + +D++  C C+K+     
Sbjct: 23  AISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRV 81

Query: 83  -YPNINEDSASSLPKKCGVEVTIPISKNTNC 112
            Y +I    A++LP KCGV++   I  +TNC
Sbjct: 82  SYSSIYLKKAAALPGKCGVKLPYKIDPSTNC 112


>AT2G18370.1 | Symbols:  | protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein |
           chr2:7980687-7981475 FORWARD
          Length = 116

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 23  EAVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH 82
            A+ C  V   L PC+ +LT     P   CC GVK+L A   T+AD++AAC C+K+ A+ 
Sbjct: 24  SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANS 83

Query: 83  YPNINEDSASSLPKKCGVEVTIPISKNTNC 112
              +  + A +L   CG  + +  S   +C
Sbjct: 84  V-TVKPELAQALASNCGASLPVDASPTVDC 112


>AT3G08770.1 | Symbols: LTP6 | LTP6; lipid binding |
           chr3:2664349-2664784 REVERSE
          Length = 113

 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)

Query: 24  AVDCGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAA--- 80
           AV C  V + L PC+ ++T     P+  CC G+  LK+ A T+ DR+  C C+K+A    
Sbjct: 20  AVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGL 78

Query: 81  SHYPNINEDSASSLPKKCGVEVTIPISKNTNC 112
           +  P   ++ A  LP KCGV++    S +T+C
Sbjct: 79  TLSPRTIQN-ALELPSKCGVDLPYKFSPSTDC 109


>AT5G44265.1 | Symbols:  | lipid binding | chr5:17832779-17833316
           REVERSE
          Length = 126

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 27  CGQVNSSLAPCIPFLTGADTAPSAACCGGVKNLKALAPTTADR-RAACDCVKAAASHY-P 84
           C       + C+ FLTG    P   CC  +  L  +A    +  R  C+CV+     Y P
Sbjct: 36  CAYTYDYFSYCLDFLTGYYYKPGKKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYTP 95

Query: 85  NINEDSASSLPKKCGVEVTIPISKNTNC 112
            +  D    LP  C   ++ PIS + +C
Sbjct: 96  PMLADKIQQLPLLCNTHLSFPISSSMDC 123