Jatropha Genome Database
- JcCA0101011.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0101011.10 + phase: 1 /partial
(281 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription f... 145 2e-35
AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1); transcript... 142 3e-34
AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3); transcr... 140 6e-34
AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1); ... 131 4e-31
AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID INSENSI... 129 2e-30
AT2G29060.1 | Symbols: | scarecrow transcription factor family ... 107 1e-23
AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13); transc... 102 2e-22
AT1G63100.1 | Symbols: | scarecrow transcription factor family ... 101 5e-22
AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14 (SCARECROW-... 100 8e-22
AT1G55580.1 | Symbols: LAS, SCL18 | LAS (Lateral Suppressor); tr... 100 1e-21
AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal transdu... 99 3e-21
AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal transdu... 99 3e-21
AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor | chr1:... 99 3e-21
AT1G07520.1 | Symbols: | scarecrow transcription factor family ... 98 6e-21
AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21); transc... 92 4e-19
AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9 ... 90 1e-18
AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein bind... 88 5e-18
AT5G41920.1 | Symbols: | scarecrow transcription factor family ... 84 1e-16
AT3G46600.2 | Symbols: | scarecrow transcription factor family ... 80 1e-15
AT3G46600.1 | Symbols: | scarecrow transcription factor family ... 80 1e-15
AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11... 80 1e-15
AT3G46600.3 | Symbols: | scarecrow transcription factor family ... 80 1e-15
AT3G50650.1 | Symbols: | scarecrow-like transcription factor 7 ... 77 1e-14
AT5G66770.1 | Symbols: | scarecrow transcription factor family ... 75 7e-14
AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor ... 68 7e-12
AT4G08250.1 | Symbols: | scarecrow transcription factor family ... 68 8e-12
AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1); transcrip... 65 7e-11
AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROOT); protein bin... 64 2e-10
AT3G49950.1 | Symbols: | scarecrow transcription factor family ... 59 3e-09
AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8 ... 55 6e-08
AT4G36710.1 | Symbols: | transcription factor | chr4:17306060-1... 52 5e-07
>AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 547
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 5/260 (1%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVG--KTTSKLQMEEVGERLACFAKTLN 59
IDL + G LMQALA + P ++T +G +T + ++++G +LA FA+ +
Sbjct: 289 IDLGLNQGMQWPALMQALALRPGGPPSF-RLTGIGPPQTENSDSLQQLGWKLAQFAQNMG 347
Query: 60 LPFTFKTAIVYNIKDLKEEMFDL-SHGEVVAIYSRTILRNIITQTDCLECLMRVLRKTHP 118
+ F FK ++ DL+ EMF+ E + + S L ++ ++ +E L+ ++ P
Sbjct: 348 VEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKP 407
Query: 119 CIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWETCLAQEIQD 178
I V E EANHN +VF+DRF EAL HYYS+ FD L+ +R++ E L ++I +
Sbjct: 408 SIVTVVEQEANHNGIVFLDRFNEAL-HYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILN 466
Query: 179 IVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRND 238
+VA E R+ R +WR + S+ QA M L +A+G ++ ND
Sbjct: 467 VVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEEND 526
Query: 239 KSIITRWKGTPLLSLSAWKF 258
++ W+ PL++ SAWK
Sbjct: 527 GCLMIGWQTRPLITTSAWKL 546
>AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1); transcription
factor | chr1:24748327-24749862 FORWARD
Length = 511
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 139/260 (53%), Gaps = 8/260 (3%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLNLP 61
IDL + G L+QALA + P + ++T +G + + +Q EVG +L A T+ +
Sbjct: 257 IDLGLNHGLQWPALIQALALRPNGPPDF-RLTGIGYSLTDIQ--EVGWKLGQLASTIGVN 313
Query: 62 FTFKTAIVYNIKDLKEEMFDLSHG-EVVAIYSRTILRNIITQTDCLECLMRVLRKTHPCI 120
F FK+ + N+ DLK EM D+ G E VA+ S L ++ ++ + ++ P I
Sbjct: 314 FEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDI 373
Query: 121 FVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWETCLAQEIQDIV 180
V E EANHN VF+DRF E+L HYYS+ FD L+ + +R++ E L ++I ++V
Sbjct: 374 MTVVEQEANHNGTVFLDRFTESL-HYYSSLFDSLEGPPSQ---DRVMSELFLGRQILNLV 429
Query: 181 AVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRNDKS 240
A E + R+ R +++WR F I ++ QA M L +A ++ N+
Sbjct: 430 ACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGC 489
Query: 241 IITRWKGTPLLSLSAWKFHQ 260
++ W+ PL++ SAW+ ++
Sbjct: 490 LLLGWQTRPLIATSAWRINR 509
>AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 523
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 132/258 (51%), Gaps = 3/258 (1%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLNLP 61
IDL + G LMQALA + P ++T VG +++ ++E+G +LA A+ + +
Sbjct: 262 IDLGLNQGMQWPALMQALALRPGGPPSF-RLTGVGNPSNREGIQELGWKLAQLAQAIGVE 320
Query: 62 FTFKTAIVYNIKDLKEEMFDL-SHGEVVAIYSRTILRNIITQTDCLECLMRVLRKTHPCI 120
F F + DL+ +MF+ + E + + S L +++Q +E L+ ++ P +
Sbjct: 321 FKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGL 380
Query: 121 FVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWETCLAQEIQDIV 180
V E EANHN VF+DRF EAL HYYS+ FD L+ + +R++ E L ++I ++V
Sbjct: 381 VTVVEQEANHNGDVFLDRFNEAL-HYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLV 439
Query: 181 AVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRNDKS 240
A E RI R + +WR + + QA + L G ++ ND S
Sbjct: 440 ATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGS 499
Query: 241 IITRWKGTPLLSLSAWKF 258
++ W+ PL++ SAWK
Sbjct: 500 LMLAWQTKPLIAASAWKL 517
>AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor |
chr2:255581-257344 REVERSE
Length = 587
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTT--SKLQMEEVGERLACFAKTLN 59
ID ++ G LMQALA + P ++T +G + + EVG +LA A+ ++
Sbjct: 326 IDFSMNQGLQWPALMQALALREGGP-PTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIH 384
Query: 60 LPFTFKTAIVYNIKDLKEEMFDL--SHGEVVAIYSRTILRNIITQTDCLECLMRVLRKTH 117
+ F ++ + ++ DL M +L S E VA+ S L ++ + +E ++ V+++
Sbjct: 385 VEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIK 444
Query: 118 PCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWETCLAQEIQ 177
P IF V E E+NHN VF+DRF E+L HYYS FD L+ D +++ E L ++I
Sbjct: 445 PVIFTVVEQESNHNGPVFLDRFTESL-HYYSTLFDSLEGVPNSQD--KVMSEVYLGKQIC 501
Query: 178 DIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRN 237
++VA E R+ R + +W F + + ++ QA M L F SG+ ++ +
Sbjct: 502 NLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEES 561
Query: 238 DKSIITRWKGTPLLSLSAWKF 258
+ ++ W PL++ SAWK
Sbjct: 562 NGCLMLGWHTRPLITTSAWKL 582
>AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor |
chr1:5149414-5151015 FORWARD
Length = 533
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKL--QMEEVGERLACFAKTLN 59
ID ++ G LMQALA + P + ++T +G + EVG +LA A+ ++
Sbjct: 274 IDFSMSQGLQWPALMQALALRPGGP-PVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIH 332
Query: 60 LPFTFKTAIVYNIKDLKEEMFDLSHGEV--VAIYSRTILRNIITQTDCLECLMRVLRKTH 117
+ F ++ + + DL M +L E+ VA+ S L ++ + ++ ++ V+ +
Sbjct: 333 VEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIK 392
Query: 118 PCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWETCLAQEIQ 177
P IF V E E+NHNS +F+DRF E+L HYYS FD L+ D +++ E L ++I
Sbjct: 393 PEIFTVVEQESNHNSPIFLDRFTESL-HYYSTLFDSLEGVPSGQD--KVMSEVYLGKQIC 449
Query: 178 DIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRN 237
++VA + R+ R + +WR F I ++ QA M L F G+ ++ +
Sbjct: 450 NVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEES 509
Query: 238 DKSIITRWKGTPLLSLSAWKF 258
D ++ W PL++ SAWK
Sbjct: 510 DGCLMLGWHTRPLIATSAWKL 530
>AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1336
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 14/266 (5%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAV-----GKTTSKLQMEEVGERLACFAK 56
+D I G + +Q+++++ P +L +IT + G ++ ++EE G RLA + K
Sbjct: 1071 VDFGILYGFQWPMFIQSISDRKDVPRKL-RITGIELPQCGFRPAE-RIEETGRRLAEYCK 1128
Query: 57 TLNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLE-----CLMR 111
N+PF +K N + ++ E D+ EV+A+ + L+N+ +T E +++
Sbjct: 1129 RFNVPFEYKAIASQNWETIRIEDLDIRPNEVLAVNAGLRLKNLQDETGSEENCPRDAVLK 1188
Query: 112 VLRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWE-T 170
++R +P +F+ + + N+ FI RF EA+ H YSA FD D L R + RI +E
Sbjct: 1189 LIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYH-YSALFDMFDSTLPRDNKERIRFERE 1247
Query: 171 CLAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGK 230
+E +++A E+ R+ R +W+ R + I + + LK + K
Sbjct: 1248 FYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHK 1307
Query: 231 SCTLDRNDKSIITRWKGTPLLSLSAW 256
+D N K ++ WKG L + S W
Sbjct: 1308 DFVVDENSKWLLQGWKGRTLYASSCW 1333
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 12/264 (4%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEE----VGERLACFAKT 57
ID I G L+ LA + +L +IT + + E G RLA + +
Sbjct: 431 IDFGISDGFQWPSLIHRLAWRRGSSCKL-RITGIELPQRGFRPAEGVIETGRRLAKYCQK 489
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCL----ECLMRVL 113
N+PF + AI + +K E L GE VA+ S RN++ +T + + +++++
Sbjct: 490 FNIPFEY-NAIAQKWESIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHSPRDTVLKLI 548
Query: 114 RKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWET-CL 172
RK P +F+ + ++N+ F+ RF E L H YS+ FD D L R DP R+++E
Sbjct: 549 RKIKPDVFIPGILSGSYNAPFFVTRFREVLFH-YSSLFDMCDTNLTREDPMRVMFEKEFY 607
Query: 173 AQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSC 232
+EI ++VA E R+ R +W+A R + + + + ++ +++ K
Sbjct: 608 GREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLKLMVESGYKPKEF 667
Query: 233 TLDRNDKSIITRWKGTPLLSLSAW 256
+D++ ++ WKG + S W
Sbjct: 668 DVDQDCHWLLQGWKGRIVYGSSIW 691
>AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 529
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 14/265 (5%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
ID I G L+Q LA + P LL++T V + S + VGERLA A++
Sbjct: 266 IDFQIAQGSQYMFLIQELAKRPGGP-PLLRVTGVDDSQSTYARGGGLSLVGERLATLAQS 324
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLEC----LMRVL 113
+PF F AI+ K ++ E L G V + +L ++ ++ +E L+ ++
Sbjct: 325 CGVPFEFHDAIMSGCK-VQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLI 383
Query: 114 RKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWET-CL 172
+ P + + E E+N N+ F+ RF+E L YY+A F+ +D R D RI E C+
Sbjct: 384 KSLSPKLVTLVEQESNTNTSPFLSRFVET-LDYYTAMFESIDAARPRDDKQRISAEQHCV 442
Query: 173 AQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSC 232
A++I +++A E+ R+ R + WR +S S+ A LK + K+
Sbjct: 443 ARDIVNMIACEESERVERHEVLGIWRVRMMMAGFTGWPVSTSAAFAASEMLKAY--DKNY 500
Query: 233 TLDRNDKSIITRWKGTPLLSLSAWK 257
L ++ ++ WK P+ + S WK
Sbjct: 501 KLGGHEGALYLFWKRRPMATCSVWK 525
>AT1G63100.1 | Symbols: | scarecrow transcription factor family
protein | chr1:23399391-23401367 REVERSE
Length = 658
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 130/272 (47%), Gaps = 24/272 (8%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLNLP 61
ID IK G Q+LA++ P ++IT +G+ SKL++ E G+RL FA+ +NL
Sbjct: 389 IDFDIKQGLQWPSFFQSLASRINPP-HHVRITGIGE--SKLELNETGDRLHGFAEAMNLQ 445
Query: 62 FTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLECLMR----VLRKTH 117
F F +V ++D++ M + GE VA+ +++ T D +R ++R T+
Sbjct: 446 FEFH-PVVDRLEDVRLWMLHVKEGESVAV--NCVMQMHKTLYDGTGAAIRDFLGLIRSTN 502
Query: 118 PCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRI-VWETCLAQEI 176
P V+ E EA HNS R + L YYSA FD + L R+ V E +EI
Sbjct: 503 PIALVLAEQEAEHNSEQLETRVCNS-LKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREI 561
Query: 177 QDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSC--TL 234
++IVA E R R + WR +L +S + Q++M L+ + S +
Sbjct: 562 RNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNV 621
Query: 235 DRNDKS----------IITRWKGTPLLSLSAW 256
+R+D+ + RW PL ++SAW
Sbjct: 622 ERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor |
chr1:2313828-2316137 REVERSE
Length = 769
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 12/264 (4%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
ID I G L+ L+ L+IT + + ++E G RLA + +
Sbjct: 504 IDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQR 563
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQT----DCLECLMRVL 113
N+PF + AI + ++ E L GE V + S RN++ +T + +++++
Sbjct: 564 HNVPFEY-NAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLI 622
Query: 114 RKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWET-CL 172
RK +P +F+ + N+N+ F+ RF EAL H YSA FD D L R D R+++E
Sbjct: 623 RKINPNVFIPAILSGNYNAPFFVTRFREALFH-YSAVFDMCDSKLAREDEMRLMYEKEFY 681
Query: 173 AQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSC 232
+EI ++VA E R+ R +W+A R + + + ++ ++N K+
Sbjct: 682 GREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIEN-GYDKNF 740
Query: 233 TLDRNDKSIITRWKGTPLLSLSAW 256
+D+N ++ WKG + + S W
Sbjct: 741 DVDQNGNWLLQGWKGRIVYASSLW 764
>AT1G55580.1 | Symbols: LAS, SCL18 | LAS (Lateral Suppressor);
transcription factor | chr1:20764106-20765443 FORWARD
Length = 445
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 16/268 (5%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIEL---LKITAVGKTTSKLQMEEVGERLACFAKTL 58
+DL I G LMQALA ++ P L+IT G+ + L G+RL FA +L
Sbjct: 182 LDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTGLN--RTGDRLTRFADSL 239
Query: 59 NLPFTFKTAIVYNIKDLKEEMFDLS-------HGEVVAIYSRTILRNIITQ-TDCLECLM 110
L F F T ++ +DL + + GE +A+ L I D + +
Sbjct: 240 GLQFQFHTLVIVE-EDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGHFL 298
Query: 111 RVLRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWET 170
++ + I + E EANH F++RF EA+ HY A FD L+ L R+ E
Sbjct: 299 SAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYM-AIFDSLEATLPPNSRERLTLEQ 357
Query: 171 -CLAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASG 229
+EI D+VA E+ R R + + W R V I +LSQA++ L+
Sbjct: 358 RWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPS 417
Query: 230 KSCTLDRNDKSIITRWKGTPLLSLSAWK 257
+ L + S+ W+ PL S+S+WK
Sbjct: 418 EGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
>AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor
| chr5:19522497-19524053 REVERSE
Length = 490
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 14/265 (5%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
ID I G L+QA A + P + +IT + TS + VG RLA AK
Sbjct: 231 IDFQIGQGSQWVTLIQAFAARPGGPPRI-RITGIDDMTSAYARGGGLSIVGNRLAKLAKQ 289
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLEC----LMRVL 113
N+PF F + V ++ ++K + + GE +A+ +L ++ ++ E L+R++
Sbjct: 290 FNVPFEFNSVSV-SVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMV 348
Query: 114 RKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRI-VWETCL 172
+ P + + E E+N N+ F RF+E ++YY+A F+ +DV L R RI V + CL
Sbjct: 349 KSLSPKVVTLVEQESNTNTAAFFPRFMET-MNYYAAMFESIDVTLPRDHKQRINVEQHCL 407
Query: 173 AQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSC 232
A+++ +I+A E R+ R + +WR+ F +S S + L+N++
Sbjct: 408 ARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSD--KY 465
Query: 233 TLDRNDKSIITRWKGTPLLSLSAWK 257
L+ D ++ W L++ AWK
Sbjct: 466 RLEERDGALYLGWMHRDLVASCAWK 490
>AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor
| chr5:19522497-19524053 REVERSE
Length = 490
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 14/265 (5%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
ID I G L+QA A + P + +IT + TS + VG RLA AK
Sbjct: 231 IDFQIGQGSQWVTLIQAFAARPGGPPRI-RITGIDDMTSAYARGGGLSIVGNRLAKLAKQ 289
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLEC----LMRVL 113
N+PF F + V ++ ++K + + GE +A+ +L ++ ++ E L+R++
Sbjct: 290 FNVPFEFNSVSV-SVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMV 348
Query: 114 RKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRI-VWETCL 172
+ P + + E E+N N+ F RF+E ++YY+A F+ +DV L R RI V + CL
Sbjct: 349 KSLSPKVVTLVEQESNTNTAAFFPRFMET-MNYYAAMFESIDVTLPRDHKQRINVEQHCL 407
Query: 173 AQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSC 232
A+++ +I+A E R+ R + +WR+ F +S S + L+N++
Sbjct: 408 ARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSD--KY 465
Query: 233 TLDRNDKSIITRWKGTPLLSLSAWK 257
L+ D ++ W L++ AWK
Sbjct: 466 RLEERDGALYLGWMHRDLVASCAWK 490
>AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 597
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 132/265 (49%), Gaps = 14/265 (5%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
ID I GG L++AL + P + +IT + S +E VG+RL A+
Sbjct: 338 IDFQISQGGQWVSLIRALGARPGGPPNV-RITGIDDPRSSFARQGGLELVGQRLGKLAEM 396
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLEC----LMRVL 113
+PF F A + +++ E + +GE +A+ +L ++ ++ +E L+R++
Sbjct: 397 CGVPFEFHGAALC-CTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLV 455
Query: 114 RKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRI-VWETCL 172
+ P + + E EAN N+ F+ RF+E + HY A F+ +DV L R RI V + CL
Sbjct: 456 KHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYL-AVFESIDVKLARDHKERINVEQHCL 514
Query: 173 AQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSC 232
A+E+ +++A E R R + +WR+ F +S + + L++++ +
Sbjct: 515 AREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYS--EKY 572
Query: 233 TLDRNDKSIITRWKGTPLLSLSAWK 257
TL+ D ++ WK PL++ AW+
Sbjct: 573 TLEERDGALYLGWKNQPLITSCAWR 597
>AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 695
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 12/265 (4%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
+D I G + +Q L+ N + L+IT + L+ +++ G RL + K
Sbjct: 430 VDFGILYGFQWPMFIQHLSKSNPG-LRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKR 488
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRN----IITQTDCL-ECLMRV 112
+PF + N + +K E F + EV+A+ + +N I + DC + +++
Sbjct: 489 FGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKL 548
Query: 113 LRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWET-C 171
+R +P +F+ + + N+ F RF EAL HY SA FD L + +P RI +E
Sbjct: 549 IRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHY-SALFDLFGATLSKENPERIHFEGEF 607
Query: 172 LAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKS 231
+E+ +++A E R+ R +W+ R + + + + +K + K
Sbjct: 608 YGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKD 667
Query: 232 CTLDRNDKSIITRWKGTPLLSLSAW 256
LD + + WKG L S S W
Sbjct: 668 FVLDEDSNWFLQGWKGRILFSSSCW 692
>AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 413
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%), Gaps = 13/261 (4%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLNLP 61
ID I G L+QA A + + +IT VG + + V +RL AK ++P
Sbjct: 161 IDFQIGQGSQWIALIQAFAARPGGAPNI-RITGVGDGSV---LVTVKKRLEKLAKKFDVP 216
Query: 62 FTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLEC----LMRVLRKTH 117
F F A+ +++ E D+ GE + + +L ++ ++ +E L+R+++
Sbjct: 217 FRF-NAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLS 275
Query: 118 PCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRI-VWETCLAQEI 176
P + + E E N N+ F+ RFLE L YY+A F+ +DV L R RI + + C+A+++
Sbjct: 276 PKVVTLVEQECNTNTSPFLPRFLET-LSYYTAMFESIDVMLPRNHKERINIEQHCMARDV 334
Query: 177 QDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDR 236
+I+A E RI R + +W++ F+ +S + + L+++++G + ++
Sbjct: 335 VNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYA--IEE 392
Query: 237 NDKSIITRWKGTPLLSLSAWK 257
D ++ W L+S AWK
Sbjct: 393 RDGALYLGWMDRILVSSCAWK 413
>AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 718
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 123/263 (46%), Gaps = 11/263 (4%)
Query: 2 IDLAIKTGGHCTILMQ--ALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLN 59
ID I G L+ ++ K I ++ G ++ ++EE G+RLA +AK
Sbjct: 455 IDFGILYGFQWPTLIHRFSMYGSPKVRITGIEFPQPGFRPAQ-RVEETGQRLAAYAKLFG 513
Query: 60 LPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQT----DCLECLMRVLRK 115
+PF +K AI ++ E D+ E+ + N+ ++ C + ++ ++ K
Sbjct: 514 VPFEYK-AIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGK 572
Query: 116 THPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWE-TCLAQ 174
+P +FV + +N+ F+ RF EAL H +S+ FD L+ + R D R+ E +
Sbjct: 573 INPDLFVFGIVNGAYNAPFFVTRFREALFH-FSSIFDMLETIVPREDEERMFLEMEVFGR 631
Query: 175 EIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTL 234
E +++A E R+ R +W R +V+ S + + + F K +
Sbjct: 632 EALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYH-KDFVI 690
Query: 235 DRNDKSIITRWKGTPLLSLSAWK 257
D++++ ++ WKG +++LS WK
Sbjct: 691 DQDNRWLLQGWKGRTVMALSVWK 713
>AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein binding
/ protein homodimerization/ sequence-specific DNA
binding / transcription factor | chr3:20070550-20072625
FORWARD
Length = 653
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 11/256 (4%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLNLP 61
IDL I G L LA++ P + ++T +G + LQ G+RL+ FA L LP
Sbjct: 404 IDLDIMQGLQWPGLFHILASRPGGPPHV-RLTGLGTSMEALQA--TGKRLSDFADKLGLP 460
Query: 62 FTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLECLMRVLRKTHPCIF 121
F F + + +L E ++ E VA++ +T +D + +L++ P +
Sbjct: 461 FEF-CPLAEKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDA--HTLWLLQRLAPKVV 517
Query: 122 VVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCL-ERCDPNRIVWETCLAQEIQDIV 180
V E + +H F+ RF+EA +HYYSA FD L E + +V + L++EI++++
Sbjct: 518 TVVEQDLSHAG-SFLGRFVEA-IHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVL 575
Query: 181 AVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRNDKS 240
AV +R ++K + WR + ++ ++ +QA + L F S +D N +
Sbjct: 576 AVGGPSRS-GEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNG-T 633
Query: 241 IITRWKGTPLLSLSAW 256
+ WK LL+ SAW
Sbjct: 634 LKLGWKDLSLLTASAW 649
>AT5G41920.1 | Symbols: | scarecrow transcription factor family
protein | chr5:16779982-16781199 FORWARD
Length = 405
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLNLP 61
IDL + G L LA++ P +L I G +S + G RLA FA +LNLP
Sbjct: 155 IDLDVMQGLQWPALFHILASR---PRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLP 211
Query: 62 FTFKT--AIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLECLMRVLRKTHPC 119
F F I+ N+ D + GE V ++ +T + LE L +LR+ P
Sbjct: 212 FEFHPIEGIIGNLIDPSQ--LATRQGEAVVVHWMQHRLYDVTGNN-LETL-EILRRLKPN 267
Query: 120 IFVVHEIEANH-NSLVFIDRFLEALLHYYSAHFDCL-DVCLERCDPNRIVWETCLAQEIQ 177
+ V E E ++ + F+ RF+EA LHYYSA FD L D E V + L EI+
Sbjct: 268 LITVVEQELSYDDGGSFLGRFVEA-LHYYSALFDALGDGLGEESGERFTVEQIVLGTEIR 326
Query: 178 DIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRN 237
+IVA R + MK W+ +R+ + + +QA + L TL
Sbjct: 327 NIVAHGGGRR--KRMK---WKEELSRVGFRPVSLRGNPATQAGLLL-GMLPWNGYTLVEE 380
Query: 238 DKSIITRWKGTPLLSLSAWKFHQQD 262
+ ++ WK LL+ SAWK D
Sbjct: 381 NGTLRLGWKDLSLLTASAWKSQPFD 405
>AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 453
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 17/267 (6%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
ID I G L+QAL+ ++ P LL++T + S + +EE G RL F
Sbjct: 189 IDFGILYGFQWPCLIQALSKRDIGP-PLLRVTGIELPQSGFRPSERVEETGRRLKRFCDK 247
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCL------ECLMR 111
N+PF + + I N +++ + ++ GE + ILR T + + + ++
Sbjct: 248 FNVPFEY-SFIAKNWENITLDDLVINSGETTVV--NCILRLQYTPDETVSLNSPRDTALK 304
Query: 112 VLRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNR-IVWET 170
+ R +P +FV EI +NS F+ RF EAL H S+ FD + L D R +V
Sbjct: 305 LFRDINPDLFVFAEINGTYNSPFFLTRFREALFH-CSSLFDMYETTLSEDDNCRTLVERE 363
Query: 171 CLAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGK 230
+ ++ ++A E R R +W+ R ++S + + +K K
Sbjct: 364 LIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKE-RYHK 422
Query: 231 SCTLDRNDKSIITRWKGTPLLSLSAWK 257
+D ++ + WKG L ++S WK
Sbjct: 423 DFVIDNDNHWMFQGWKGRVLYAVSCWK 449
>AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 583
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 17/267 (6%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
ID I G L+QAL+ ++ P LL++T + S + +EE G RL F
Sbjct: 319 IDFGILYGFQWPCLIQALSKRDIGP-PLLRVTGIELPQSGFRPSERVEETGRRLKRFCDK 377
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCL------ECLMR 111
N+PF + + I N +++ + ++ GE + ILR T + + + ++
Sbjct: 378 FNVPFEY-SFIAKNWENITLDDLVINSGETTVV--NCILRLQYTPDETVSLNSPRDTALK 434
Query: 112 VLRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNR-IVWET 170
+ R +P +FV EI +NS F+ RF EAL H S+ FD + L D R +V
Sbjct: 435 LFRDINPDLFVFAEINGTYNSPFFLTRFREALFH-CSSLFDMYETTLSEDDNCRTLVERE 493
Query: 171 CLAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGK 230
+ ++ ++A E R R +W+ R ++S + + +K K
Sbjct: 494 LIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKE-RYHK 552
Query: 231 SCTLDRNDKSIITRWKGTPLLSLSAWK 257
+D ++ + WKG L ++S WK
Sbjct: 553 DFVIDNDNHWMFQGWKGRVLYAVSCWK 579
>AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 610
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 17/268 (6%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
+D + G L++AL+ + P +L++T + + + +EE G RL F
Sbjct: 336 VDFGVLYGFQWPCLLRALSKRPGGP-PMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQ 394
Query: 58 LNLPFTFK-TAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLEC----LMRV 112
N+PF F A + L E M + VV R L+ +T L+ ++++
Sbjct: 395 FNVPFEFNFIAKKWETITLDELMINPGETTVVNCIHR--LQYTPDETVSLDSPRDTVLKL 452
Query: 113 LRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCD--PNRIVWE- 169
R +P +FV EI +NS F+ RF EAL H YS+ FD D + D NR + E
Sbjct: 453 FRDINPDLFVFAEINGMYNSPFFMTRFREALFH-YSSLFDMFDTTIHAEDEYKNRSLLER 511
Query: 170 TCLAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASG 229
L ++ +++ E R R +WR R IS + +A+ ++
Sbjct: 512 ELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRK-RYH 570
Query: 230 KSCTLDRNDKSIITRWKGTPLLSLSAWK 257
+ +D ++ ++ WKG + + S WK
Sbjct: 571 RDFVIDSDNNWMLQGWKGRVIYAFSCWK 598
>AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 551
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 17/267 (6%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAKT 57
ID I G L+QAL+ ++ P LL++T + S + +EE G RL F
Sbjct: 287 IDFGILYGFQWPCLIQALSKRDIGP-PLLRVTGIELPQSGFRPSERVEETGRRLKRFCDK 345
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCL------ECLMR 111
N+PF + + I N +++ + ++ GE + ILR T + + + ++
Sbjct: 346 FNVPFEY-SFIAKNWENITLDDLVINSGETTVV--NCILRLQYTPDETVSLNSPRDTALK 402
Query: 112 VLRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNR-IVWET 170
+ R +P +FV EI +NS F+ RF EAL H S+ FD + L D R +V
Sbjct: 403 LFRDINPDLFVFAEINGTYNSPFFLTRFREALFH-CSSLFDMYETTLSEDDNCRTLVERE 461
Query: 171 CLAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGK 230
+ ++ ++A E R R +W+ R ++S + + +K K
Sbjct: 462 LIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKE-RYHK 520
Query: 231 SCTLDRNDKSIITRWKGTPLLSLSAWK 257
+D ++ + WKG L ++S WK
Sbjct: 521 DFVIDNDNHWMFQGWKGRVLYAVSCWK 547
>AT3G50650.1 | Symbols: | scarecrow-like transcription factor 7
(SCL7) | chr3:18806472-18808100 REVERSE
Length = 542
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 14/268 (5%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTT----SKLQMEEVGERLACFAKT 57
+D I G + L+QALA ++ ++I+ + + + G RL FA
Sbjct: 277 VDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAI 336
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQT-DCLECLMRVLRKT 116
L+L F F ++ I+ L F + EV+ + L ++ +T + +R+ R
Sbjct: 337 LDLNFEF-YPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSL 395
Query: 117 HPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWETCL-AQE 175
+P I + E E + N + F +R ++ L +YSA F+ L+ L+R R+ E L +
Sbjct: 396 NPRIVTLGEYEVSLNRVEFANR-VKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRR 454
Query: 176 IQDIVAVEDD-----ARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGK 230
I D+V +DD R + ++WR + + S ++SQA++ L N+
Sbjct: 455 IMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYST 514
Query: 231 SCTLDRNDKSIIT-RWKGTPLLSLSAWK 257
+L ++ I+ W PLL++S+W+
Sbjct: 515 LYSLVESEPGFISLAWNNVPLLTVSSWR 542
>AT5G66770.1 | Symbols: | scarecrow transcription factor family
protein | chr5:26660723-26662477 FORWARD
Length = 584
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEE----VGERLACFAKT 57
+D I G L+QALA + ++++ + + E G RL FAK
Sbjct: 323 VDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKV 382
Query: 58 LNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCL-ECLMRVLRKT 116
L+L F F I+ I L F + EV+A+ L ++ +T + + +R+ +
Sbjct: 383 LDLNFDF-IPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSL 441
Query: 117 HPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRI-VWETCLAQE 175
+P + + E E + N + F +R AL +YSA F+ L+ L R R+ V +
Sbjct: 442 NPRVVTLGEYEVSLNRVGFANRVKNAL-QFYSAVFESLEPNLGRDSEERVRVERELFGRR 500
Query: 176 IQDIVAVEDDARIFRDM--KIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCT 233
I ++ E I R+ + ++WR ++S ++SQA++ L N+ +
Sbjct: 501 ISGLIGPEKTG-IHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYS 559
Query: 234 LDRNDKSIIT-RWKGTPLLSLSAWK 257
+ + I+ W PLL+LS+W+
Sbjct: 560 IVESKPGFISLAWNDLPLLTLSSWR 584
>AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor |
chr1:18678177-18679625 REVERSE
Length = 482
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 127/318 (39%), Gaps = 68/318 (21%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLNLP 61
IDL L+QA ++ + P L +IT V K +E++ RL A+ L++P
Sbjct: 168 IDLDASEPAQWLALLQAFNSRPEGPPHL-RITGVHH--QKEVLEQMAHRLIEEAEKLDIP 224
Query: 62 FTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCL---EC---------- 108
F F +V + L E + GE +A+ S L + D L C
Sbjct: 225 FQF-NPVVSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSG 283
Query: 109 --LMRVLRKTH----------------------------------------------PCI 120
L RVL +H P +
Sbjct: 284 VDLQRVLMMSHGSAAEARENDMSNNNGYSPSGDSASSLPLPSSGRTDSFLNAIWGLSPKV 343
Query: 121 FVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWETCL-AQEIQDI 179
VV E +++HN ++R LE+L + Y+A FDCL+ + R +RI E L +EI++I
Sbjct: 344 MVVTEQDSDHNGSTLMERLLESL-YTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNI 402
Query: 180 VAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRNDK 239
++ E R R K+++W +S ++ QA+ L+ + +
Sbjct: 403 ISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGC 462
Query: 240 SIITRWKGTPLLSLSAWK 257
++I W+ PL S+SAW+
Sbjct: 463 AVIC-WQDRPLYSVSAWR 479
>AT4G08250.1 | Symbols: | scarecrow transcription factor family
protein | chr4:5196787-5198238 FORWARD
Length = 483
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 118/275 (42%), Gaps = 22/275 (8%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCP-IELLKITAVGKTT----SKLQMEEVGERLACFAK 56
+D I G LMQAL ++N P + L+ITA+ + T S ++E G RL FA
Sbjct: 218 VDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFAD 277
Query: 57 TLNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQT-DCLECLMRVLRK 115
++ PF+++ + + L GE V I L QT + + +
Sbjct: 278 SIGQPFSYQHCKL-DTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSSVISFLSEAKT 336
Query: 116 THP-CIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRIVWETC--- 171
+P + +VHE + F+ RF++ LLH +SA FD L+ L +P R E
Sbjct: 337 LNPKLVTLVHEEVGLMGNQGFLYRFMD-LLHQFSAIFDSLEAGLSIANPARGFVERVFIG 395
Query: 172 --LAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASG 229
+A + I A + + F W + E+S ++ QA++ L F G
Sbjct: 396 PWVANWLTRITANDAEVESFA-----SWPQWLETNGFKPLEVSFTNRCQAKLLLSLFNDG 450
Query: 230 -KSCTLDRNDKSIITRWKGTPLLSLSAWKFHQQDQ 263
+ L +N ++ WK L+S S W Q +Q
Sbjct: 451 FRVEELGQN--GLVLGWKSRRLVSASFWASCQTNQ 483
>AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 593
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 2 IDLAIKTGGHCTILMQALAN-QNKCPIELLKITAVGKTTSKLQ----MEEVGERLACFAK 56
ID I G L++++A K P L++T + S + + +G RL A+
Sbjct: 333 IDFDINQGNQYMTLIRSIAELPGKRP--RLRLTGIDDPESVQRSIGGLRIIGLRLEQLAE 390
Query: 57 TLNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNI----ITQTDCLECLMRV 112
+ F FK A+ + GE + + L ++ +T + + L+ +
Sbjct: 391 DNGVSFKFK-AMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHM 449
Query: 113 LRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPNRI-VWETC 171
++ +P + V E + N N+ F RF+EA YYSA F+ LD+ L R R+ V C
Sbjct: 450 VKSLNPKLVTVVEQDVNTNTSPFFPRFIEAY-EYYSAVFESLDMTLPRESQERMNVERQC 508
Query: 172 LAQEIQDIVAVEDDARIFRDMKIDEWRA 199
LA++I +IVA E + RI R +WRA
Sbjct: 509 LARDIVNIVACEGEERIERYEAAGKWRA 536
>AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROOT); protein
binding / sequence-specific DNA binding / transcription
factor | chr4:17691871-17693466 FORWARD
Length = 531
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 19/260 (7%)
Query: 15 LMQALANQNKCPIELLKITAV-------GKTTSKLQMEEVGERLACFAKTLNLPFTFKTA 67
L++ALA ++ L T V +T S M+E+G R+ FA+ + +PF F
Sbjct: 272 LLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFN-- 329
Query: 68 IVYNIKDLKE---EMFDLSHGEVVAIYSRTILRNIITQTDCLECLMRVLRKTHPCIFVVH 124
I++++ DL E D+ EV+AI + I ++ + ++ R+ P I V
Sbjct: 330 IIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVV 389
Query: 125 EIEAN---HNSLVFIDRFLEAL---LHYYSAHFDCLDVCLERCDPNRIVWETCLAQEIQD 178
E EA+ F D FL L ++ F+ + R R++ E + I D
Sbjct: 390 EEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVD 449
Query: 179 IVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRND 238
+VA E R +W S + L+ + G + D
Sbjct: 450 LVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPD 509
Query: 239 KS-IITRWKGTPLLSLSAWK 257
+ I W+ P++ SAW+
Sbjct: 510 AAGIFLCWRDQPVVWASAWR 529
>AT3G49950.1 | Symbols: | scarecrow transcription factor family
protein | chr3:18522570-18523802 FORWARD
Length = 410
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 24/273 (8%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTS-----KLQMEEVGERLACFAK 56
+DL++ L+ A+A++ P LLK+T V + + EE+G +L FA
Sbjct: 141 VDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFAT 200
Query: 57 TLNL-------PFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQT------ 103
T N+ P T+ ++ L+ ++ S E + + +LR I +
Sbjct: 201 TRNITMEFTIVPSTYSDGFSSLLQQLR--IYPSSFNEALVVNCHMMLRYIPEEPLTSSSS 258
Query: 104 DCLECLMRVLRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDP 163
++ LR +P I + E + + S ++R L++ +Y+ FD D +
Sbjct: 259 SLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNR-LKSAFNYFWIPFDTTDTFMSE--- 314
Query: 164 NRIVWETCLAQEIQDIVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMAL 223
R +E ++ +I+++VA E R+ R W + + +++ + L
Sbjct: 315 QRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAML 374
Query: 224 KNFASGKSCTLDRNDKSIITRWKGTPLLSLSAW 256
+ A G + +D+S++ WKG ++ + W
Sbjct: 375 EEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 640
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 112/278 (40%), Gaps = 30/278 (10%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIE-----LLKITAVGKTT--------SKLQMEEVG 48
ID I GG L++ L+ + + ++KITAV + +++ VG
Sbjct: 371 IDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVG 430
Query: 49 ERLACFAKTLNLPFTFKTAIVYNIKDLKEEMFDLSHGEVVAIYSRTILRNIITQTDCLEC 108
+ L+ L + +F + DL E E +A+ L + ++ C E
Sbjct: 431 DLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTEN 490
Query: 109 ----LMRVLRKTHPCIFVVHEIEANHNSLVFIDRFLEALLHYYSAHFDCLDVCLERCDPN 164
L+R ++ P + + E E N N+ F+ R E+ Y A + ++ + + +
Sbjct: 491 PRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSES-CACYGALLESVESTVPSTNSD 549
Query: 165 RIVWETCLAQEIQDIVAVEDDARIFRDMKIDEWR-----AYFTRLKMVETEISVSSLSQA 219
R E + +++ + VA E RI R +WR A F + + E +I+ S S+
Sbjct: 550 RAKVEEGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSE-KIAESMKSRG 608
Query: 220 QMALKNFASGKSCTLDRNDKSIITRWKGTPLLSLSAWK 257
F T+ ++ + W G L SAW+
Sbjct: 609 NRVHPGF------TVKEDNGGVCFGWMGRALTVASAWR 640
>AT4G36710.1 | Symbols: | transcription factor |
chr4:17306060-17307520 FORWARD
Length = 486
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 11/260 (4%)
Query: 2 IDLAIKTGGHCTILMQALANQNKCPIELLKITAVGKTTSKLQMEEVGERLACFAKTLNLP 61
+D I GG LM+ + + L++TAV ++ V E L FA + +
Sbjct: 235 VDFEIGFGGQYASLMREI-TEKSVSGGFLRVTAVVAEECAVETRLVKENLTQFAAEMKIR 293
Query: 62 FTFKTAIVYNIKDLKEEMFDLSHGE-VVAIYSRTILRNIITQTDCLECLMRVLRKTHPCI 120
F + ++ + L + GE V + S I R + TD + L RV K +
Sbjct: 294 FQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNNLRRVSPKV--VV 351
Query: 121 FVVHEIEAN-HNSLVFIDRFLEALLHYYSAHFDCLDVCLERCD-PNRIVWETCLAQEIQD 178
FV E S F F+ AL +Y+ + LD D +IV L +I
Sbjct: 352 FVDSEGWTEIAGSGSFRREFVSAL-EFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISA 410
Query: 179 IVAVEDDARIFRDMKIDEWRAYFTRLKMVETEISVSSLSQAQMALKNFASGKSCTLDRND 238
V D R +M WR F M ++S + QA+ L+ A + + +
Sbjct: 411 AVETAADRRHTGEMT---WREAFCAAGMRPIQLSQFADFQAECLLEK-AQVRGFHVAKRQ 466
Query: 239 KSIITRWKGTPLLSLSAWKF 258
++ W G L++ SAW+F
Sbjct: 467 GELVLCWHGRALVATSAWRF 486