Jatropha Genome Database

JcCA0080871.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080871.20 + phase: 0 /TE
         (706 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   294   1e-79
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   104   2e-22
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    97   5e-20
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    62   2e-09

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  294 bits (753), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 159/434 (36%), Positives = 247/434 (56%), Gaps = 32/434 (7%)

Query: 162 KRQRRPAISSDFVVYSLE----HDCEFSIDKDPVS--FQKAMECDNSEK----------- 204
           +R R+PA   D+  +S+     HD    +  + VS  +   + C    K           
Sbjct: 36  RRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEF 95

Query: 205 --WFNAMKEEMQSMSDNQVWDLVELPEGSKKVGCKWVFKTKRDSKGNIERYKARLVAKGY 262
             W  AM +E+ +M     W++  LP   K +GCKWV+K K +S G IERYKARLVAKGY
Sbjct: 96  LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155

Query: 263 TQKDGIDYKETFSPVSKKDSIRIILALVAHYDLELHQMDVKTAFFNGVLXEEVYMDQPEG 322
           TQ++GID+ ETFSPV K  S+++ILA+ A Y+  LHQ+D+  AF NG L EE+YM  P G
Sbjct: 156 TQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215

Query: 323 FVVTGKENL----MCKLKKSIYGLKQASRQWYLKFNNTITSYGFIENTVDRCIYMKVSGS 378
           +     ++L    +C LKKSIYGLKQASRQW+LKF+ T+  +GF+++  D   ++K++ +
Sbjct: 216 YAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275

Query: 379 KLIMLVLYVDDILLSANDVGLLHDVKGFLSKNFEMKDMGEASFMIGIEIFCDRSQGLLGX 438
             + +++YVDDI++ +N+   + ++K  L   F+++D+G   + +G+EI   RS   +  
Sbjct: 276 LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI--ARSAAGINI 333

Query: 439 SQRAYIDKVLERFRMEKCSAGIVPIQKGDRFSKMQCPKNDLERKEMESIPYASVVGSLMY 498
            QR Y   +L+   +  C    VP+     FS       D     +++  Y  ++G LMY
Sbjct: 334 CQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHS--GGDF----VDAKAYRRLIGRLMY 387

Query: 499 VQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVRRYLQGTKDHILTYRKSSHLELVGYS 558
           +Q  TR DISFAV  L ++   P + H +A  K+  Y++GT    L Y   + ++L  +S
Sbjct: 388 LQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFS 446

Query: 559 DSDYAGCVDSRKST 572
           D+ +  C D+R+ST
Sbjct: 447 DASFQSCKDTRRST 460


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 14/192 (7%)

Query: 383 LVLYVDDILLSANDVGLLHDVKGFLSKNFEMKDMGEASFMIGIEIFCDRSQGLLGXSQRA 442
           L+LYVDDILL+ +   LL+ +   LS  F MKD+G   + +GI+I    S   L  SQ  
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFL--SQTK 60

Query: 443 YIDKVLERFRMEKCS--AGIVPIQKGDRFSKMQCPKNDLERKEMESIPYASVVGSLMYVQ 500
           Y +++L    M  C   +  +P++     S  + P         +   + S+VG+L Y+ 
Sbjct: 61  YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP---------DPSDFRSIVGALQYL- 110

Query: 501 TCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVRRYLQGTKDHILTYRKSSHLELVGYSDS 560
           T TRPDIS+AV ++ +    P +  +   K+V RY++GT  H L   K+S L +  + DS
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170

Query: 561 DYAGCVDSRKST 572
           D+AGC  +R+ST
Sbjct: 171 DWAGCTSTRRST 182


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 70/111 (63%), Gaps = 3/111 (2%)

Query: 185 SIDKDPVSFQKAMECDNSEKWFNAMKEEMQSMSDNQVWDLVELPEGSKKVGCKWVFKTKR 244
           +I K+P S   A++      W  AM+EE+ ++S N+ W LV  P     +GCKWVFKTK 
Sbjct: 23  TIKKEPKSVIFALK---DPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKL 79

Query: 245 DSKGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSIRIILALVAHYDL 295
            S G ++R KARLVAKG+ Q++GI + ET+SPV +  +IR IL +    ++
Sbjct: 80  HSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
           chrM:68918-69253 REVERSE
          Length = 111

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)

Query: 497 MYVQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKKVRRYLQGTKDHILTYRKSSHLELVG 556
           MY+ T TRPD++FAV  L ++ S       +A  KV  Y++GT    L Y  +S L+L  
Sbjct: 1   MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59

Query: 557 YSDSDYAGCVDSRKS 571
           ++DSD+A C D+R+S
Sbjct: 60  FADSDWASCPDTRRS 74