Jatropha Genome Database
- JcCA0080721.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0080721.20 + phase: 0
(575 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G01920.2 | Symbols: | SET domain-containing protein | chr1:3... 726 0.0
AT1G01920.1 | Symbols: | SET domain-containing protein | chr1:3... 711 0.0
AT1G14030.1 | Symbols: | ribulose-1,5 bisphosphate carboxylase ... 67 4e-11
AT2G18850.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT3G56570.1 | Symbols: | SET domain-containing protein | chr3:2... 50 4e-06
>AT1G01920.2 | Symbols: | SET domain-containing protein |
chr1:316204-319507 FORWARD
Length = 547
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/575 (65%), Positives = 438/575 (76%), Gaps = 34/575 (5%)
Query: 1 MAV-EEEAKLEGFLQWLQANKVELRGCSIKFCGPDKGFGVFSSKDV--SDGVLLVVPLDL 57
MA+ EEEAKLE FL WLQ N ELRGC+IK+ KGFG+F+S SD VLLVVPLDL
Sbjct: 1 MAISEEEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDL 60
Query: 58 AITPMRVLQDPLIGPECRAMYEEGEVDDRFLMILFLMLERLRKNSSWKPYLDMLPSTFGN 117
AITPMRVLQDPL+GPEC+ M+E+G+VDDRFLMILFL LERLR NSSWKPYLDMLP+ FGN
Sbjct: 61 AITPMRVLQDPLLGPECQKMFEQGQVDDRFLMILFLTLERLRINSSWKPYLDMLPTRFGN 120
Query: 118 PLWFTDDELLELKGTTLYRATQLQKKNLLSLYDDKVKGLMKKLLILDGDSEGEVCFEDFL 177
PLWF+DD++LELKGT LY AT+LQKK LLSLY DKV+ L+ KLLILDGDSE +V FE FL
Sbjct: 121 PLWFSDDDILELKGTNLYHATELQKKKLLSLYHDKVEVLVTKLLILDGDSESKVSFEHFL 180
Query: 178 WANSLFWSRALNIPLPQSYVFPQIQEDQAINCSANNSESSHNDNSCEDLLNEKDEKRIKV 237
WANS+FWSRALNIPLP S+VFPQ Q+D S + S + NS E EK+ +
Sbjct: 181 WANSVFWSRALNIPLPHSFVFPQSQDDTGECTSTSESPETAPVNSNE----EKEIQAQPA 236
Query: 238 PGVDNQVSGAISTPVQGDTLWVEGLVPGIDFCNHATNLKAAATWEVDGTGLVTGIPFSMY 297
P V + GDT+WVEGLVPGIDFCNH +LK ATWEVDG G V+ +PFSMY
Sbjct: 237 PSVGS-----------GDTIWVEGLVPGIDFCNH--DLKPVATWEVDGIGSVSRVPFSMY 283
Query: 298 LLSAQQTAFQIGKEISISYGNKGNEELLYLYGFVIENNPDDYLMVHYPAEAIQDVPFSDS 357
LLS Q KEISISYGNKGNEELLYLYGFVI+NNPDDYLMVHYP EAI +PFSDS
Sbjct: 284 LLSVAQRPIP-KKEISISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPVEAIPSIPFSDS 342
Query: 358 KMQLLEAQKGELRCLLPKSLLDHGFFPVGTPNNDNNGKCKNDPVCNFSWSGQRKTPSYIN 417
K QLLEAQ +LRCLLPKS+L+HGFFP T + + + CNFSWSG+RK P+Y+N
Sbjct: 343 KGQLLEAQNAQLRCLLPKSVLNHGFFPRTTSVIRESDEKETVRSCNFSWSGKRKMPTYMN 402
Query: 418 KLVFPDDFLTSLRTIAMQEDELYKVSSMLEELVGSDGERQPTDTEVRAAIWEACGDSGAL 477
KLVFP+DF+T LRTIAMQE+E+YKVS+MLEELV S QP++TEVR A+WEACGDSGAL
Sbjct: 403 KLVFPEDFMTGLRTIAMQEEEIYKVSAMLEELVESRQGEQPSETEVRMAVWEACGDSGAL 462
Query: 478 QLLVDLLQAKMVDLEENSRTEECDSELLERAQHVQNPEHQGRYESNLRRAEIGGLNELEL 537
QLLVDLL +KM+ LEENS TEE D+ LLE A +++ H+ + + RR
Sbjct: 463 QLLVDLLNSKMMKLEENSGTEEQDARLLEEACVLES--HEESRDLDGRR----------- 509
Query: 538 MSRNKWASIVYRRGQKVLTRLFLKEAEHALQLSLS 572
MSRNKW+S+VYRRGQK LTRL LKEAEHAL L+LS
Sbjct: 510 MSRNKWSSVVYRRGQKQLTRLLLKEAEHALHLALS 544
>AT1G01920.1 | Symbols: | SET domain-containing protein |
chr1:316204-319507 FORWARD
Length = 572
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/597 (62%), Positives = 440/597 (73%), Gaps = 53/597 (8%)
Query: 1 MAV-EEEAKLEGFLQWLQANKVELRGCSIKFCGPDKGFGVFSSKDV--SDGVLLVVPLDL 57
MA+ EEEAKLE FL WLQ N ELRGC+IK+ KGFG+F+S SD VLLVVPLDL
Sbjct: 1 MAISEEEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDL 60
Query: 58 AITPMRVLQDPLIGPECRAMYEEGEVDDRFLMILFLMLERLRKNSSWKPYLDMLPSTFGN 117
AITPMRVLQDPL+GPEC+ M+E+G+VDDRFLMILFL LERLR NSSWKPYLDMLP+ FGN
Sbjct: 61 AITPMRVLQDPLLGPECQKMFEQGQVDDRFLMILFLTLERLRINSSWKPYLDMLPTRFGN 120
Query: 118 PLWFTDDELLELKGTTLYRATQLQKKNLLSLYDDKVKGLMKKLLILDGDSEGEVCFEDFL 177
PLWF+DD++LELKGT LY AT+LQKK LLSLY DKV+ L+ KLLILDGDSE +V FE FL
Sbjct: 121 PLWFSDDDILELKGTNLYHATELQKKKLLSLYHDKVEVLVTKLLILDGDSESKVSFEHFL 180
Query: 178 WANSLFWSRALNIPLPQSYVFPQIQEDQAINCSANNSESSHNDNSCEDLLNEKDEKRIKV 237
WANS+FWSRALNIPLP S+VFPQ Q+D S + S + NS NE+ K +
Sbjct: 181 WANSVFWSRALNIPLPHSFVFPQSQDDTGECTSTSESPETAPVNS-----NEEKGKSL-- 233
Query: 238 PGVDNQVSGAISTPVQGDTLWVEGLVPGIDFCNHATNLKAAATWEVDGTGLVTGIPFSMY 297
Q + ++ + GDT+WVEGLVPGIDFCNH +LK ATWEVDG G V+ +PFSMY
Sbjct: 234 --TSAQPAPSVGS---GDTIWVEGLVPGIDFCNH--DLKPVATWEVDGIGSVSRVPFSMY 286
Query: 298 LLSAQQTAFQIGKEISISYGNKGNEELLYLYGFVIENNPDDYLM---------------- 341
LLS Q KEISISYGNKGNEELLYLYGFVI+NNPDDYLM
Sbjct: 287 LLSVAQRPIP-KKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIKEMLVNFVLTSVVTF 345
Query: 342 ------VHYPAEAIQDVPFSDSKMQLLEAQKGELRCLLPKSLLDHGFFPVGTPNNDNNGK 395
VHYP EAI +PFSDSK QLLEAQ +LRCLLPKS+L+HGFFP T + +
Sbjct: 346 NNGFIQVHYPVEAIPSIPFSDSKGQLLEAQNAQLRCLLPKSVLNHGFFPRTTSVIRESDE 405
Query: 396 CKNDPVCNFSWSGQRKTPSYINKLVFPDDFLTSLRTIAMQEDELYKVSSMLEELVGSDGE 455
+ CNFSWSG+RK P+Y+NKLVFP+DF+T LRTIAMQE+E+YKVS+MLEELV S
Sbjct: 406 KETVRSCNFSWSGKRKMPTYMNKLVFPEDFMTGLRTIAMQEEEIYKVSAMLEELVESRQG 465
Query: 456 RQPTDTEVRAAIWEACGDSGALQLLVDLLQAKMVDLEENSRTEECDSELLERAQHVQNPE 515
QP++TEVR A+WEACGDSGALQLLVDLL +KM+ LEENS TEE D+ LLE A +++
Sbjct: 466 EQPSETEVRMAVWEACGDSGALQLLVDLLNSKMMKLEENSGTEEQDARLLEEACVLES-- 523
Query: 516 HQGRYESNLRRAEIGGLNELELMSRNKWASIVYRRGQKVLTRLFLKEAEHALQLSLS 572
H+ + + RR MSRNKW+S+VYRRGQK LTRL LKEAEHAL L+LS
Sbjct: 524 HEESRDLDGRR-----------MSRNKWSSVVYRRGQKQLTRLLLKEAEHALHLALS 569
>AT1G14030.1 | Symbols: | ribulose-1,5 bisphosphate carboxylase
oxygenase large subunit N-methyltransferase, putative |
chr1:4805493-4807440 REVERSE
Length = 482
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 13/183 (7%)
Query: 9 LEGFLQWLQANKVELRGCSIKFCGPDKGFGVFSSKDVS-DGVLLVVPLDLAITPMRVLQD 67
+ F +WL+ V + +G G+ + +D+ + V+L +P L I P V
Sbjct: 49 VRNFWKWLRDQGVVSGKSVAEPAVVPEGLGLVARRDIGRNEVVLEIPKRLWINPETVTAS 108
Query: 68 PLIGPECRAMYEEGEVDDRFLMILFLMLERLRKNSSWKPYLDMLPSTFGNPLWFTDDELL 127
IGP C G + + LFL+ E+ + SSW+ YLDMLP + + ++++++EL
Sbjct: 109 K-IGPLC------GGLKPWVSVALFLIREKYEEESSWRVYLDMLPQSTDSTVFWSEEELA 161
Query: 128 ELKGTTLYRATQLQKKNLLSLYDDKVKGLMKKLLILDGD-SEGEVCFEDFLWANSLFWSR 186
ELKGT L T K+ + +++ L +++L+ + D + +DF+WA + SR
Sbjct: 162 ELKGTQLLSTTLGVKEYV----ENEFLKLEQEILLPNKDLFSSRITLDDFIWAFGILKSR 217
Query: 187 ALN 189
A +
Sbjct: 218 AFS 220
>AT2G18850.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: SET (InterPro:IPR001214);
BEST Arabidopsis thaliana protein match is: SET
domain-containing protein (TAIR:AT3G07670.1); Has 597
Blast hits to 594 proteins in 119 species: Archae - 0;
Bacteria - 0; Metazoa - 207; Fungi - 132; Plants - 162;
Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
| chr2:8160788-8163479 FORWARD
Length = 543
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 21/195 (10%)
Query: 4 EEEAKLEGFLQWLQANKVELRGCSIKFCGPDKGFGVFSSKDVSDG-VLLVVPLDLAITPM 62
E+E+KL ++W Q N V+ + + G G G +S+D+ G V L +P+ I+
Sbjct: 148 EKESKL---VEWGQDNGVKTKLQIAQIDG--YGRGAIASEDLKFGDVALEIPVSSIISEE 202
Query: 63 RVLQDPLIGPECRAMYEEGEVDDRF----LMILFLMLERLRKNSSWKPYLDMLPSTFGNP 118
V MY E D +++L+ M E+ +S +KPY D L F
Sbjct: 203 YVYNSD--------MYPILETFDGITSETMLLLWTMREKHNLDSKFKPYFDSLQENFCTG 254
Query: 119 LWFTDDELLELKGTTLYRATQLQKKNLLSLYDDKVKGLMKKLLILDGDSEGEVCFEDFLW 178
L F D ++EL GT L K+ L YD+ + L + + +E +LW
Sbjct: 255 LSFGVDAIMELDGTLLLDEIMQAKELLRERYDELIPLLSNHREVFPPEL---YTWEHYLW 311
Query: 179 ANSLFWSRALNIPLP 193
A L++S ++ I P
Sbjct: 312 ACELYYSNSMQIKFP 326
>AT3G56570.1 | Symbols: | SET domain-containing protein |
chr3:20958660-20961137 FORWARD
Length = 531
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 148/360 (41%), Gaps = 53/360 (14%)
Query: 8 KLEGFLQWLQANKVELRGCSIKFCGPDKGFGVFSSKDVSDGVLLVVPLDLAITPMRVLQD 67
+L F +W+QAN V+ + G V + D+ +G ++ I+ L
Sbjct: 5 RLRAFKRWMQANGVDCSEALNLVDDENDGVSVRAFCDLKEGDVVA-----NISKTACLTI 59
Query: 68 PLIGPECRAMYEEGEVDDRFLMILFLMLER-LRKNSSWKPYLDMLPSTFGNPL-WFTDDE 125
G R M E ++D + + LM ER L + S W YL +LP PL W +D
Sbjct: 60 KTSG--AREMIESADLDGSLGLSVALMYERSLGEESPWAGYLQILPIQEDLPLVWSLEDL 117
Query: 126 LLELKGTTLYRATQLQKKNLLSLYDDKVKGLMKKLLIL----DGDSEGEVCFEDFLWANS 181
L GT L++ L K++ + +Y+D + ++ L D DS G +++L A S
Sbjct: 118 DSLLSGTELHK---LVKEDHVLIYEDWKENILPLTSSLPQNVDSDSFG---IKEYLAAKS 171
Query: 182 LFWSRALNI---------PLPQSYVFPQIQEDQAINCSANNSESSHNDNSCEDLLNEKDE 232
L SR+ I PL + ED ++SE+ +DN +D NE +
Sbjct: 172 LIASRSFEIDDYHGSGMVPLADLFNHKTGAEDVHF-THESDSEADESDN--DDAANETTD 228
Query: 233 KRIKVPGVDNQVSGAISTPVQGDTLWVEGLVPGIDFCNHA--TNLKAAATWEVDGTGLVT 290
+ D S S+P Q + E VPG + + A + E +
Sbjct: 229 E-------DEPSSKISSSPEQS---FEE--VPGENTDDEAKEEEEEEEEEEEGEEEEEGE 276
Query: 291 GIPFSMYLLSAQQTAFQI--------GKEISISYGNKGNEELLYLYGFVIENNPDDYLMV 342
+ +L Q+ ++ G E+ +YG GN LL+ YGF +NP D + +
Sbjct: 277 EEEENSSMLQNDQSGLKMIMVKDVSAGAEVFNTYGLMGNAALLHRYGFTELDNPYDIVNI 336