Jatropha Genome Database

JcCA0080681.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080681.20 - phase: 1 /TE
         (1617 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   334   4e-91
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   142   2e-33
ATMG00300.1 | Symbols: ORF145A | hypothetical protein | chrM:896...   104   6e-22
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    88   5e-17
ATMG00710.1 | Symbols: ORF120 | hypothetical protein | chrM:2075...    86   2e-16
AT3G21000.1 | Symbols:  | unknown protein | chr3:7363921-7365138...    52   5e-06

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  334 bits (856), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 197/494 (39%), Positives = 279/494 (56%), Gaps = 28/494 (5%)

Query: 793  IADDSIPSTFNEAVKSSEEVKWRKAMEDEMKSLYKNQTWNLVDPPKGKKAIGCKWVYAKK 852
            IA    PST+NEA    E + W  AM+DE+ ++    TW +   P  KK IGCKWVY  K
Sbjct: 80   IAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136

Query: 853  ---DGFPDRDSVHYKARLVAKGYAQTEGIDYNEVFSPVVKHSSIRILLALVAQFDLELVQ 909
               DG  +R    YKARLVAKGY Q EGID+ E FSPV K +S++++LA+ A ++  L Q
Sbjct: 137  YNSDGTIER----YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192

Query: 910  LDVKTAFLHGDLEEEIYMTQPEGFKVVGKE----NMVCKLEKSLYGLKQSPRQWYKRFDK 965
            LD+  AFL+GDL+EEIYM  P G+     +    N VC L+KS+YGLKQ+ RQW+ +F  
Sbjct: 193  LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 966  FMQRQKYTRSKYDHCVYLRKLQDGSFIYLLLYVDDMLIASKNKQEIENLKNQLNQEFEMK 1025
             +    + +S  DH  Y  K+    F+ +L+YVDD++I S N   ++ LK+QL   F+++
Sbjct: 253  TLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLR 311

Query: 1026 DLGEAKRILGMEITRDRKLGRLCLNQKQYLRKILKRFGMDNKTKPVSTPLAPHFKLSAAQ 1085
            DLG  K  LG+EI R      +C  Q++Y   +L   G+    KP S P+ P    SA  
Sbjct: 312  DLGPLKYFLGLEIARSAAGINIC--QRKYALDLLDETGLLG-CKPSSVPMDPSVTFSA-- 366

Query: 1086 SPKNDAEREYMSRVPYANVVGSLMYAMVCTRPDISQAVGVVSRYMHDPGKEHWQAVKWIL 1145
                 +  +++    Y  ++G LMY  + TR DIS AV  +S++   P   H QAV  IL
Sbjct: 367  ----HSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421

Query: 1146 RYLQNTVDVGLIFEQDKNNGQRIVGYCDSDYAGDLDKRRSTTGYVFTLAKAPVSWKSTLQ 1205
             Y++ TV  GL +        ++  + D+ +    D RRST GY   L  + +SWKS  Q
Sbjct: 422  HYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQ 479

Query: 1206 STVALSITEAEYMAVTEAVKEAIWLQGLLDELGIRQNN-IVVHCDSQSAIHLAKNQVYHA 1264
              V+ S  EAEY A++ A  E +WL     EL +  +   ++ CD+ +AIH+A N V+H 
Sbjct: 480  QVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHE 539

Query: 1265 RTKHIDVRFHFVRE 1278
            RTKHI+   H VRE
Sbjct: 540  RTKHIESDCHSVRE 553


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  142 bits (358), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 13/238 (5%)

Query: 992  IYLLLYVDDMLIASKNKQEIENLKNQLNQEFEMKDLGEAKRILGMEITRDRKLGRLCLNQ 1051
            +YLLLYVDD+L+   +   +  L  QL+  F MKDLG     LG++I +    G L L+Q
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSG-LFLSQ 58

Query: 1052 KQYLRKILKRFGMDNKTKPVSTPLAPHFKLSAAQSPKNDAEREYMSRVPYANVVGSLMYA 1111
             +Y  +IL   GM +  KP+STPL    KL+++ S       +Y     + ++VG+L Y 
Sbjct: 59   TKYAEQILNNAGMLD-CKPMSTPLP--LKLNSSVS-----TAKYPDPSDFRSIVGALQY- 109

Query: 1112 MVCTRPDISQAVGVVSRYMHDPGKEHWQAVKWILRYLQNTVDVGLIFEQDKNNGQRIVGY 1171
            +  TRPDIS AV +V + MH+P    +  +K +LRY++ T+  GL     KN+   +  +
Sbjct: 110  LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIH--KNSKLNVQAF 167

Query: 1172 CDSDYAGDLDKRRSTTGYVFTLAKAPVSWKSTLQSTVALSITEAEYMAVTEAVKEAIW 1229
            CDSD+AG    RRSTTG+   L    +SW +  Q TV+ S TE EY A+     E  W
Sbjct: 168  CDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00300.1 | Symbols: ORF145A | hypothetical protein |
           chrM:89617-90054 REVERSE
          Length = 145

 Score =  104 bits (259), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 6/125 (4%)

Query: 372 DGVMKVISGALVVMKGVRRRNNLYYYQGNIIIGSTATVVSSDDKELETTRLWHRRLGHAG 431
           +GV+KV+ G   ++KG  R ++LY  QG++  G +    ++ D+    TRLWH RL H  
Sbjct: 26  EGVLKVLKGCRTILKG-NRHDSLYILQGSVETGESNLAETAKDE----TRLWHSRLAHMS 80

Query: 432 EKSLKILSDQGLLKNVKTCKLDFCEHCTKGKQTRVKFGTGIHNTKGILDYVHSDVWG-PS 490
           ++ +++L  +G L + K   L FCE C  GK  RV F TG H TK  LDYVHSD+WG PS
Sbjct: 81  QRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPS 140

Query: 491 TTASL 495
              S 
Sbjct: 141 VPLSF 145


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 88.2 bits (217), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 7/95 (7%)

Query: 814 WRKAMEDEMKSLYKNQTWNLVDPPKGKKAIGCKWVYAKK---DGFPDRDSVHYKARLVAK 870
           W +AM++E+ +L +N+TW LV PP  +  +GCKWV+  K   DG  DR     KARLVAK
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR----LKARLVAK 95

Query: 871 GYAQTEGIDYNEVFSPVVKHSSIRILLALVAQFDL 905
           G+ Q EGI + E +SPVV+ ++IR +L +  Q ++
Sbjct: 96  GFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130


>ATMG00710.1 | Symbols: ORF120 | hypothetical protein |
           chrM:207553-207915 REVERSE
          Length = 120

 Score = 85.5 bits (210), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 586 MNRTLLEKVRCMLSNAGLDKKFWAEAISYACHLINRLPSTAIGGKTPIEVWCGEPANDYD 645
           MNRT++EKVR ML   GL K F A+A + A H+IN+ PSTAI    P EVW  +    Y 
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWF-QSVPTYS 59

Query: 646 SLRVFGSTAYYHVKESKLDPRAKKA 670
            LR FG  AY H  E KL PRAKK 
Sbjct: 60  YLRRFGCVAYIHCDEGKLKPRAKKG 84


>AT3G21000.1 | Symbols:  | unknown protein | chr3:7363921-7365138
           FORWARD
          Length = 405

 Score = 51.6 bits (122), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 12/144 (8%)

Query: 226 CAFCREKGHWKKDCPKLKAKGKAVINSNIAECDDEDS-DFSLVIMASIDNSSANLTSSGE 284
           C  C +  H ++DC       K  I+++  E +DE   D+ L    ++ N  A  T   +
Sbjct: 230 CGLCYKNNHNQEDC-------KFRIHTDKEEKEDEIVVDYRL---ETVPNLGAK-TYDDD 278

Query: 285 VWLLDSACSHHMSPHRDWFFDFKELENEVVYTANNVPCFTEGIGSIHLKNHDGSIRILTD 344
           +W++      +M+P+  +F          V T +      EG G + ++  +G  + + +
Sbjct: 279 IWIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRN 338

Query: 345 VRYVPSLTKNLISVGALESKGLTV 368
           V +VP L +N++S G + SK  ++
Sbjct: 339 VIFVPGLNRNVLSFGKMVSKRYSI 362