Jatropha Genome Database

JcCA0080621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080621.10 + phase: 0 /partial
         (268 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G47830.1 | Symbols:  | cation efflux family protein / metal t...   237   5e-63
AT2G47830.2 | Symbols:  | cation efflux family protein / metal t...   235   2e-62

>AT2G47830.1 | Symbols:  | cation efflux family protein / metal
           tolerance protein, putative (MTPc1) |
           chr2:19591094-19593973 REVERSE
          Length = 471

 Score =  237 bits (605), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 127/249 (51%), Positives = 164/249 (65%), Gaps = 28/249 (11%)

Query: 4   GGSILGIKFLDPLAGLVVSGMILKAGLEIGYQSVFELVDAAIPAEDLDPVRQTILQVEGV 63
           GGSILG+ FLDPLAGLVVS MI+ AGL+ G+QS+ ELVDAAIPA+ L+P+RQTILQVEGV
Sbjct: 248 GGSILGVNFLDPLAGLVVSTMIVNAGLKTGHQSILELVDAAIPAQQLEPIRQTILQVEGV 307

Query: 64  KGCHRLRGRRAGSSLHLDVHIEVDPFSSVSAAHGIGEKVRQEIHKCHPGIAEVFIHIGFS 123
           KGCHRLRGRRAGSSL+LDVHI VDPFSSVS AH +GE VR++I+  HP ++EVFIHI  +
Sbjct: 308 KGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIDPA 367

Query: 124 PCEIDLHNNVEETANENRNVSLEDRDIEMIVSNVFQSKFPERMEVERITRHCLQSKMLVE 183
             +        ++  +  N+  E + +E  VS++F S+  E++ ++RIT H L SK+L++
Sbjct: 368 FLQFSCSTKDHDSITKESNICQEIKHVEATVSDIFSSQLSEKLTIKRITPHLLHSKILLQ 427

Query: 184 IEVSMPPEILIRYIIQPAHDVCYCSMQHLPLLHACVITNRDAKEVANAAEKEILKAASNI 243
           I V+MP  + I                            +D    A  AEKEILKAA N+
Sbjct: 428 IVVAMPSTMSI----------------------------QDVMIAAEHAEKEILKAAPNV 459

Query: 244 MTVRIQLRL 252
             V IQL L
Sbjct: 460 ARVSIQLSL 468


>AT2G47830.2 | Symbols:  | cation efflux family protein / metal
           tolerance protein, putative (MTPc1) |
           chr2:19591094-19593973 REVERSE
          Length = 468

 Score =  235 bits (600), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/249 (50%), Positives = 162/249 (65%), Gaps = 31/249 (12%)

Query: 4   GGSILGIKFLDPLAGLVVSGMILKAGLEIGYQSVFELVDAAIPAEDLDPVRQTILQVEGV 63
           GGSILG+ FLDPLAGLVVS MI+ AGL+ G+QS+ ELVDAAIPA+ L+P+RQTILQVEGV
Sbjct: 248 GGSILGVNFLDPLAGLVVSTMIVNAGLKTGHQSILELVDAAIPAQQLEPIRQTILQVEGV 307

Query: 64  KGCHRLRGRRAGSSLHLDVHIEVDPFSSVSAAHGIGEKVRQEIHKCHPGIAEVFIHIGFS 123
           KGCHRLRGRRAGSSL+LDVHI VDPFSSVS AH +GE VR++I+  HP ++EVFIHI  +
Sbjct: 308 KGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIDPA 367

Query: 124 PCEIDLHNNVEETANENRNVSLEDRDIEMIVSNVFQSKFPERMEVERITRHCLQSKMLVE 183
             +        ++  +  N+  E + +E  VS++F S+  E++ ++RIT H L SK+L++
Sbjct: 368 FLQFSCSTKDHDSITKESNICQEIKHVEATVSDIFSSQLSEKLTIKRITPHLLHSKILLQ 427

Query: 184 IEVSMPPEILIRYIIQPAHDVCYCSMQHLPLLHACVITNRDAKEVANAAEKEILKAASNI 243
           I V+MP                               +  D    A  AEKEILKAA N+
Sbjct: 428 IVVAMP-------------------------------STMDVMIAAEHAEKEILKAAPNV 456

Query: 244 MTVRIQLRL 252
             V IQL L
Sbjct: 457 ARVSIQLSL 465