Jatropha Genome Database

JcCA0080591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080591.10 - phase: 0 
         (243 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G16300.1 | Symbols: GAPCP-2 | GAPCP-2; NAD or NADH binding / ...   316   7e-87
AT1G79530.1 | Symbols: GAPCP-1 | GAPCP-1 (GLYCERALDEHYDE-3-PHOSP...   298   2e-81
AT3G04120.1 | Symbols: GAPC, GAPC-1, GAPC1 | GAPC1 (GLYCERALDEHY...   209   1e-54
AT1G13440.1 | Symbols: GAPC-2, GAPC2 | GAPC2 (GLYCERALDEHYDE-3-P...   209   1e-54
AT1G13440.2 | Symbols: GAPC-2, GAPC2 | GAPC2 (GLYCERALDEHYDE-3-P...   165   2e-41
AT1G42970.1 | Symbols: GAPB | GAPB (GLYCERALDEHYDE-3-PHOSPHATE D...   141   4e-34
AT1G12900.1 | Symbols: GAPA-2 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHA...   138   3e-33
AT1G12900.3 | Symbols: GAPA-2 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHA...   136   1e-32
AT3G26650.1 | Symbols: GAPA, GAPA-1 | GAPA (GLYCERALDEHYDE 3-PHO...   131   4e-31
AT1G12900.2 | Symbols: GAPA-2 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHA...    65   3e-11

>AT1G16300.1 | Symbols: GAPCP-2 | GAPCP-2; NAD or NADH binding /
           binding / catalytic/ glyceraldehyde-3-phosphate
           dehydrogenase (phosphorylating)/
           glyceraldehyde-3-phosphate dehydrogenase |
           chr1:5574433-5577406 FORWARD
          Length = 420

 Score =  316 bits (810), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 160/245 (65%), Positives = 176/245 (71%), Gaps = 2/245 (0%)

Query: 1   MAFSSLLRS--TTAAPXXXXXXXXXXXXXXXRFKDLKSSKSIFXXXXXXXXXXXQACCTR 58
           MA SSLLRS  T+AA                    L  S S+                 +
Sbjct: 1   MALSSLLRSAATSAAAPRVELYPSSSYNHSQVTSSLGFSHSLTSSRFSGAAVSTGKYNAK 60

Query: 59  SFQPIKATATEMPPTILKSRNDGKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFID 118
             QPIKATATE PP + +SR+ GKTK+GINGFGRIGRLV+RIATFRDDI+VVAVNDPFID
Sbjct: 61  RVQPIKATATEAPPAVHRSRSSGKTKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFID 120

Query: 119 TKYMAYMFKYDSTHGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVES 178
            KYMAYMFKYDSTHG YKG+I V+D+STLEINGKQ+KV SKRDPAEIPW D GAEYVVES
Sbjct: 121 AKYMAYMFKYDSTHGNYKGTINVIDDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVES 180

Query: 179 SGVFTTIDXXXXXXXXXXXXVVISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLA 238
           SGVFTT+             V+ISAPSADAPMFVVGVNEKTY PNMD+VSNASCTTNCLA
Sbjct: 181 SGVFTTVGQASSHLKGGAKKVIISAPSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLA 240

Query: 239 PLAKV 243
           PLAKV
Sbjct: 241 PLAKV 245


>AT1G79530.1 | Symbols: GAPCP-1 | GAPCP-1
           (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1);
           NAD or NADH binding / binding / catalytic/
           glyceraldehyde-3-phosphate dehydrogenase
           (phosphorylating)/ glyceraldehyde-3-phosphate
           dehydrogenase | chr1:29916232-29919088 REVERSE
          Length = 422

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/248 (62%), Positives = 176/248 (70%), Gaps = 6/248 (2%)

Query: 1   MAFSSLLRS----TTAAPXXXXXXXXXXXXXXXRFKDLKSSKSIF-XXXXXXXXXXXQAC 55
           MAFSSLLRS    T AAP                   L  S+++             Q  
Sbjct: 1   MAFSSLLRSAASYTVAAPRPDFFSSPASDHSKV-LSSLGFSRNLKPSRFSSGISSSLQNG 59

Query: 56  CTRSFQPIKATATEMPPTILKSRNDGKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDP 115
             RS QPIKATATE+P  + +S + GKTK+GINGFGRIGRLV+RIAT RDDI+VVAVNDP
Sbjct: 60  NARSVQPIKATATEVPSAVRRSSSSGKTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDP 119

Query: 116 FIDTKYMAYMFKYDSTHGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYV 175
           FID KYMAYM KYDSTHG +KGSI V+D+STLEINGK++ V SKRDP+EIPW D GA+YV
Sbjct: 120 FIDAKYMAYMLKYDSTHGNFKGSINVIDDSTLEINGKKVNVVSKRDPSEIPWADLGADYV 179

Query: 176 VESSGVFTTIDXXXXXXXXXXXXVVISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTN 235
           VESSGVFTT+             V+ISAPSADAPMFVVGVNE TY+PNMD+VSNASCTTN
Sbjct: 180 VESSGVFTTLSKAASHLKGGAKKVIISAPSADAPMFVVGVNEHTYQPNMDIVSNASCTTN 239

Query: 236 CLAPLAKV 243
           CLAPLAKV
Sbjct: 240 CLAPLAKV 247


>AT3G04120.1 | Symbols: GAPC, GAPC-1, GAPC1 | GAPC1
           (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1);
           glyceraldehyde-3-phosphate dehydrogenase
           (phosphorylating)/ glyceraldehyde-3-phosphate
           dehydrogenase | chr3:1081077-1083131 FORWARD
          Length = 338

 Score =  209 bits (533), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 102/165 (61%), Positives = 120/165 (72%), Gaps = 1/165 (0%)

Query: 80  DGKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTKYMAYMFKYDSTHGGYK-GS 138
           D K +IGINGFGRIGRLV R+   RDD+++VAVNDPFI T+YM YMFKYDS HG +K   
Sbjct: 3   DKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNE 62

Query: 139 IKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXXXXXXX 198
           +K+ DE TL    K + V   R+P +IPW + GA+YVVES+GVFT  D            
Sbjct: 63  LKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKK 122

Query: 199 VVISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
           VVISAPS DAPMFVVGVNE  YK ++D+VSNASCTTNCLAPLAKV
Sbjct: 123 VVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKV 167


>AT1G13440.1 | Symbols: GAPC-2, GAPC2 | GAPC2
           (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2); NAD or
           NADH binding / binding / catalytic/
           glyceraldehyde-3-phosphate dehydrogenase
           (phosphorylating)/ glyceraldehyde-3-phosphate
           dehydrogenase | chr1:4608465-4610494 REVERSE
          Length = 338

 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 102/165 (61%), Positives = 121/165 (73%), Gaps = 1/165 (0%)

Query: 80  DGKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTKYMAYMFKYDSTHGGYKG-S 138
           D K +IGINGFGRIGRLV R+   RDD+++VAVNDPFI T+YM YMFKYDS HG +K   
Sbjct: 3   DKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHE 62

Query: 139 IKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXXXXXXX 198
           +KV D+ TL    K + V   R+P +IPWG+ GA++VVES+GVFT  D            
Sbjct: 63  LKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKK 122

Query: 199 VVISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
           VVISAPS DAPMFVVGVNE  YK ++D+VSNASCTTNCLAPLAKV
Sbjct: 123 VVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKV 167


>AT1G13440.2 | Symbols: GAPC-2, GAPC2 | GAPC2
           (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2); NAD or
           NADH binding / binding / catalytic/
           glyceraldehyde-3-phosphate dehydrogenase
           (phosphorylating)/ glyceraldehyde-3-phosphate
           dehydrogenase | chr1:4608465-4610494 REVERSE
          Length = 310

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/142 (57%), Positives = 99/142 (69%), Gaps = 1/142 (0%)

Query: 80  DGKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTKYMAYMFKYDSTHGGYK-GS 138
           D K +IGINGFGRIGRLV R+   RDD+++VAVNDPFI T+YM YMFKYDS HG +K   
Sbjct: 3   DKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHE 62

Query: 139 IKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXXXXXXX 198
           +KV D+ TL    K + V   R+P +IPWG+ GA++VVES+GVFT  D            
Sbjct: 63  LKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKK 122

Query: 199 VVISAPSADAPMFVVGVNEKTY 220
           VVISAPS DAPMFVVGVNE  +
Sbjct: 123 VVISAPSKDAPMFVVGVNEHEF 144


>AT1G42970.1 | Symbols: GAPB | GAPB (GLYCERALDEHYDE-3-PHOSPHATE
           DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate
           dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate
           dehydrogenase | chr1:16127552-16129584 FORWARD
          Length = 447

 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 9/185 (4%)

Query: 64  KATATEMPPTILKSRNDGKTKIGINGFGRIGRLVMRIATFRDD--IDVVAVNDPFIDTKY 121
           KA  T  P   ++     K K+ INGFGRIGR  +R    R D  ++VV +ND     K 
Sbjct: 66  KAVTTSTP---VRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKN 121

Query: 122 MAYMFKYDSTHGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGV 181
            +++ KYDS  G +K  +K++D  T+ ++GK IKV S RDP ++PW + G + V+E +GV
Sbjct: 122 ASHLLKYDSMLGTFKAEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGV 181

Query: 182 FTTIDXXXXXXXXXXXXVVISAPS--ADAPMFVVGVNEKTYKPNM-DVVSNASCTTNCLA 238
           F                V+I+AP+  AD P +V+GVNE+ Y  ++ +++SNASCTTNCLA
Sbjct: 182 FVDGPGAGKHIQAGASKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLA 241

Query: 239 PLAKV 243
           P AKV
Sbjct: 242 PFAKV 246


>AT1G12900.1 | Symbols: GAPA-2 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE
           DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding /
           binding / catalytic/ glyceraldehyde-3-phosphate
           dehydrogenase (phosphorylating)/
           glyceraldehyde-3-phosphate dehydrogenase |
           chr1:4392634-4394283 REVERSE
          Length = 399

 Score =  138 bits (347), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 105/188 (55%), Gaps = 4/188 (2%)

Query: 59  SFQPIKATATEMPPTILKSRNDGKTKIGINGFGRIGRLVMRIATFRDD--IDVVAVNDPF 116
           SF   + +A        K   + K K+ INGFGRIGR  +R    R D  +DVV +ND  
Sbjct: 41  SFVSFQTSAMRSNGGYRKGVTEAKIKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG 100

Query: 117 IDTKYMAYMFKYDSTHGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVV 176
              K  +++ KYDST G +   +K   +S L ++GK IK+ S R+P+ +PWG+ G + V+
Sbjct: 101 -GVKQASHLLKYDSTLGIFDADVKPSGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVI 159

Query: 177 ESSGVFTTIDXXXXXXXXXXXXVVISAPS-ADAPMFVVGVNEKTYKPNMDVVSNASCTTN 235
           E +GVF   D            V+I+AP   D P +VVGVN + Y     ++SNASCTTN
Sbjct: 160 EGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTN 219

Query: 236 CLAPLAKV 243
           CLAP  KV
Sbjct: 220 CLAPFVKV 227


>AT1G12900.3 | Symbols: GAPA-2 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE
           DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding /
           binding / catalytic/ glyceraldehyde-3-phosphate
           dehydrogenase (phosphorylating)/
           glyceraldehyde-3-phosphate dehydrogenase |
           chr1:4392634-4393850 REVERSE
          Length = 350

 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 76  KSRNDGKTKIGINGFGRIGRLVMRIATFRDD--IDVVAVNDPFIDTKYMAYMFKYDSTHG 133
           K   + K K+ INGFGRIGR  +R    R D  +DVV +ND     K  +++ KYDST G
Sbjct: 9   KGVTEAKIKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLG 67

Query: 134 GYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXX 193
            +   +K   +S L ++GK IK+ S R+P+ +PWG+ G + V+E +GVF   D       
Sbjct: 68  IFDADVKPSGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQ 127

Query: 194 XXXXXVVISAPS-ADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
                V+I+AP   D P +VVGVN + Y     ++SNASCTTNCLAP  KV
Sbjct: 128 AGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKV 178


>AT3G26650.1 | Symbols: GAPA, GAPA-1 | GAPA (GLYCERALDEHYDE
           3-PHOSPHATE DEHYDROGENASE A SUBUNIT);
           glyceraldehyde-3-phosphate dehydrogenase/ protein
           binding | chr3:9795226-9796848 FORWARD
          Length = 396

 Score =  131 bits (330), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 76  KSRNDGKTKIGINGFGRIGRLVMRIATFRDD--IDVVAVNDPFIDTKYMAYMFKYDSTHG 133
           K   + K K+ INGFGRIGR  +R    R D  +D++A+ND     K  +++ KYDST G
Sbjct: 55  KGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLG 113

Query: 134 GYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXX 193
            +   +K   E+ + ++GK I+V S R+P+ +PW + G + V+E +GVF   +       
Sbjct: 114 IFDADVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIE 173

Query: 194 XXXXXVVISAPS-ADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
                V+I+AP   D P +VVGVN   Y  +  ++SNASCTTNCLAP  KV
Sbjct: 174 AGAKKVIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKV 224


>AT1G12900.2 | Symbols: GAPA-2 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE
           DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding /
           binding / catalytic/ glyceraldehyde-3-phosphate
           dehydrogenase (phosphorylating)/
           glyceraldehyde-3-phosphate dehydrogenase |
           chr1:4392634-4393747 REVERSE
          Length = 317

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 169 DYGAEYVVESSGVFTTIDXXXXXXXXXXXXVVISAPS-ADAPMFVVGVNEKTYKPNMDVV 227
           + G + V+E +GVF   D            V+I+AP   D P +VVGVN + Y     ++
Sbjct: 70  ELGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTII 129

Query: 228 SNASCTTNCLAPLAKV 243
           SNASCTTNCLAP  KV
Sbjct: 130 SNASCTTNCLAPFVKV 145