Jatropha Genome Database
- JcCA0080281.40
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0080281.40 + phase: 0
(723 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 865 0.0
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 367 e-101
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 231 2e-60
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 2e-57
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 6e-57
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 4e-56
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 2e-55
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 2e-55
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 210 2e-54
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 6e-54
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 208 9e-54
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 8e-53
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 1e-52
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 2e-52
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 3e-52
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 199 4e-51
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 199 4e-51
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 1e-50
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 2e-50
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 4e-50
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 196 4e-50
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 194 1e-49
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 2e-49
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 2e-49
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 4e-49
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 6e-49
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 1e-48
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 189 4e-48
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 189 4e-48
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 5e-48
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 189 5e-48
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 6e-48
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 7e-48
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 7e-48
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 188 9e-48
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 1e-47
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 1e-47
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 184 2e-46
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 183 3e-46
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 183 4e-46
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 5e-46
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 6e-46
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 7e-46
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 2e-45
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 2e-45
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 180 2e-45
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 3e-45
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 4e-45
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 5e-45
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 7e-45
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 1e-44
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 4e-44
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 4e-44
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 6e-44
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 175 1e-43
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 174 2e-43
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 2e-43
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 174 2e-43
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 173 5e-43
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 7e-43
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 1e-42
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 3e-42
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 4e-42
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 8e-42
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 8e-42
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 1e-41
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 168 1e-41
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 2e-41
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 2e-41
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 2e-41
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 5e-41
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 7e-41
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 1e-40
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 1e-40
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 2e-40
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 5e-40
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 162 6e-40
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 8e-40
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 8e-40
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 2e-39
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 160 2e-39
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 3e-39
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 160 3e-39
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 3e-39
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 3e-39
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 7e-39
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 7e-39
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 9e-39
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 1e-38
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 157 2e-38
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 2e-38
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 3e-38
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 4e-38
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 5e-38
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 155 9e-38
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 154 3e-37
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 152 7e-37
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 152 8e-37
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 1e-36
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 9e-36
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 1e-35
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 5e-35
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 8e-35
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 9e-35
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 9e-34
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 1e-33
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 1e-33
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 2e-33
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 140 2e-33
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 139 4e-33
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 139 5e-33
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 5e-33
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 5e-33
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 1e-32
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 3e-32
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 3e-32
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 3e-32
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 4e-32
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 4e-32
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 1e-31
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 3e-31
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 3e-31
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 7e-31
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 5e-30
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 9e-30
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 3e-29
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 4e-29
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 5e-29
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 6e-29
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 7e-29
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 8e-29
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 8e-29
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-28
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-28
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 3e-28
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 123 3e-28
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 122 9e-28
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 120 3e-27
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 120 4e-27
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 4e-27
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 7e-27
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 2e-26
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 116 4e-26
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 113 5e-25
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 5e-25
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 112 7e-25
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 7e-25
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 112 1e-24
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 111 1e-24
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 110 3e-24
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 8e-24
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 8e-24
AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 108 1e-23
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 108 2e-23
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 5e-23
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 105 9e-23
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 105 1e-22
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 3e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 103 3e-22
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 100 5e-21
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 6e-21
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 6e-21
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 6e-21
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 8e-21
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 99 1e-20
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 96 7e-20
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 4e-19
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 7e-19
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 2e-18
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 91 2e-18
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 4e-18
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 4e-18
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 90 5e-18
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 90 5e-18
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 89 1e-17
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 3e-17
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-17
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-17
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-17
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 86 9e-17
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 84 3e-16
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 7e-16
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 82 1e-15
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 82 2e-15
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 81 2e-15
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 81 2e-15
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-14
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 78 2e-14
AT1G60770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT5G66631.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 8e-14
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 75 1e-13
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 1e-13
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 75 2e-13
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 75 2e-13
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 5e-13
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 5e-13
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 5e-13
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 7e-13
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT5G27300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-12
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G27300.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-12
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 72 1e-12
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 2e-12
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 71 2e-12
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 4e-12
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 5e-12
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT5G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 70 6e-12
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 70 6e-12
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-12
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 7e-12
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-12
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-12
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 7e-12
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 1e-11
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 68 2e-11
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT1G06270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279)... 66 7e-11
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 1e-10
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G02490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT2G30780.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 64 3e-10
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT1G76280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 5e-10
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 5e-10
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 7e-10
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 1e-09
AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 1e-09
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 60 4e-09
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 60 6e-09
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 7e-09
AT4G35850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G76280.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 59 1e-08
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 59 1e-08
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G36300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 2e-08
AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |... 58 2e-08
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 58 2e-08
AT3G56030.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 2e-08
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 3e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 3e-08
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 57 3e-08
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G69290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G07590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 57 4e-08
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 57 5e-08
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 56 8e-08
AT4G14190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 8e-08
AT1G15480.1 | Symbols: | DNA binding | chr1:5318307-5320422 FOR... 55 1e-07
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G27460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G28380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT5G28340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT4G21705.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 8e-07
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G68980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G15820.1 | Symbols: OTP51 | OTP51 (ORGANELLE TRANSCRIPT PROCE... 52 2e-06
AT5G09450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT1G80270.3 | Symbols: | DNA-binding protein, putative | chr1:3... 50 4e-06
AT1G80270.2 | Symbols: | DNA-binding protein, putative | chr1:3... 50 4e-06
AT1G80270.1 | Symbols: | DNA-binding protein, putative | chr1:3... 50 4e-06
AT2G20710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G03100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-06
AT2G20710.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/678 (61%), Positives = 524/678 (77%), Gaps = 5/678 (0%)
Query: 49 NVERRLSTKTKKAKSIARLINTK--XXXXXXXXXXXXXXXXXXKTTGFQVLRLIKVPSKA 106
N ER STK+K A+S+AR +N+ +TT Q LRLIKVP+
Sbjct: 27 NEER--STKSKLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKVPADG 84
Query: 107 LKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
L+FF+W+ GF+H +QS+FLMLE LGRARNLNVARNFLFSI+R+SNG VKL+DR+FNSL
Sbjct: 85 LRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSL 144
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
IRSYG AGLFQESVKLF +MK +G+SPSV+TFNSLL ILLKRGRT MA +FDEM TYG
Sbjct: 145 IRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYG 204
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
V PD+YTFN LI GFCKNSMVD+ FR F+ M ++C+PD+VTYNT++DG+CRAGKVK AH
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
NV+ GM+KK+ D++P+VVSYTTL+RGYCMKQ IDEA++VF +M+ +GLKPNAVTYNTLIK
Sbjct: 265 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIK 324
Query: 347 GLCEVQKIDKIKEVLEGALEV-GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
GL E + D+IK++L G + F+PD CT N L+ HC+AG+L+ A+KVF++M+ K+
Sbjct: 325 GLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKL 384
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
PDSA+YSVL+R LC +F+RAE L++EL +K +LL D PL AAY MF++LC NG
Sbjct: 385 HPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG 444
Query: 466 KTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQS 525
KT +AE+ FRQLMKRG QDP SYK LI GHC+EG F+ YELLVLMLRR F PD E Y+
Sbjct: 445 KTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYEL 504
Query: 526 LIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGK 585
LIDGLL+ GE LLA+ TLQ+ML+SS +P +TFHS+LA L K+ +A+ES LV L+LE +
Sbjct: 505 LIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKR 564
Query: 586 IRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLL 645
IRQN+ LST VRLLFS+ ++K F IV LLYDNGY+V M+EL+ +L ++RKLL+A+ L+
Sbjct: 565 IRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLV 624
Query: 646 LFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAG 705
LFCLEK +DID CNTVIEGLCK K+ SEAF LY ELVE GNHQ LSC LR ALEA
Sbjct: 625 LFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAA 684
Query: 706 GRSKEVEFLSKRMPNEKQ 723
G+ +E++F+SKRM ++
Sbjct: 685 GKWEELQFVSKRMATLRE 702
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/627 (33%), Positives = 342/627 (54%), Gaps = 10/627 (1%)
Query: 94 FQVLRLIKVPSKALKFFNWLPQMGFT-HNDQSYFLMLEILGRARNLNVARNFLFSIKRKS 152
+ VL K AL+FF W + G H+ ++ M+++LG LN AR L + K
Sbjct: 121 YNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKG 180
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
V ++ F LI SYG+AG+ QESVK+F MK +GV ++ ++NSL ++L+RGR
Sbjct: 181 ---VPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYM 237
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
MAK F++M+S GV P +T+N+++ GF + ++ RFF+ M + PD T+NT+
Sbjct: 238 MAKRYFNKMVSE-GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTM 296
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK 332
++G CR K+ A + M K + P VVSYTT+++GY +D+ L +FEEM
Sbjct: 297 INGFCRFKKMDEAEKLFVEM--KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
G++PNA TY+TL+ GLC+ K+ + K +L+ + D L+ AG++
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA 414
Query: 393 ALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL-V 451
A +V + M V ++ Y VL+ N C + RA KL D L++K I+LR + +
Sbjct: 415 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 474
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLM 511
+AY + ++LC NG+T+KAE FRQLMKRG QD + LI GH KEG ++ YE+L +M
Sbjct: 475 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIM 534
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
RR +S Y+ LI + KGEP A L M++ VP +S F S++ L + G
Sbjct: 535 SRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRV 594
Query: 572 HESASLVVLLLEGK--IRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELI 629
++ +++++++ I N+ L + L G ++ + LL NG+ D+ L+
Sbjct: 595 QTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLL 654
Query: 630 IFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNH 689
LS+ K + A KLL F LE+ +++ + V++ L K A+ + +++EKG+
Sbjct: 655 SVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSS 714
Query: 690 QPLSCLENLRVALEAGGRSKEVEFLSK 716
+ L +L G +K+ + LS+
Sbjct: 715 TDWKSSDELIKSLNQEGNTKQADVLSR 741
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 274/564 (48%), Gaps = 69/564 (12%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT-NMAKSVFDEM 221
F+ +++SY R L +++ + ++ G P V+++N++L ++ R + A++VF EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
L + V+P+ +T+NILIRGFC +D F KM + C P++VTYNTL+DG C+ K
Sbjct: 197 LES-QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 282 VKTAHNVVKGMVKKSEDLN---------------------------------PDVVSYTT 308
+ +++ M K + N D V+Y T
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
L++GYC + N +ALV+ EM+ GL P+ +TY +LI +C+ +++ E L+ + V
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD-QMRVR 374
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G P+ T TL++G G +NEA +V +M + P TY+ L+ C G E A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTS 487
+ +++ +KG+ +P V +Y ++ C++ +A R R+++++G + D +
Sbjct: 435 IAVLEDMKEKGL-------SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
Y LI G C++ + +L MLR PD Y +LI+ +G+ A Q +M+
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 548 KSSIVPTTSTFHSILAGLLKKGYAHESASLVV-LLLEGKIRQNVTLSTHTVRLLFSNGLR 606
+ ++P T+ ++ GL K+ E+ L++ L E + +VT T
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT------------ 595
Query: 607 DKGFRIVGLLYDNGYMVDMKELIIFL---SQSRKLLEANKLLLFCLEKHHNIDIDMCNTV 663
L +N ++ K ++ + + EA+++ L K+H D N +
Sbjct: 596 ---------LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 664 IEGLCKMKKLSEAFGLYYELVEKG 687
I G C+ + +A+ LY E+V+ G
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 241/452 (53%), Gaps = 29/452 (6%)
Query: 93 GFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS 152
GF++LR S ALK G N SY +++ L R + L + R+
Sbjct: 259 GFKLLR-----SMALK--------GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
L++ +N+LI+ Y + G F +++ + M G++PSV+T+ SL+ + K G N
Sbjct: 306 ---YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
A D+M G+ P+ T+ L+ GF + +++ +R ++M+ P +VTYN L
Sbjct: 363 RAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK 332
++G C GK++ A V++ M K + L+PDVVSY+T+L G+C ++DEAL V EMV+K
Sbjct: 422 INGHCVTGKMEDAIAVLEDM--KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
G+KP+ +TY++LI+G CE ++ + ++ E L V G PD T L+N +C G+L +
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEK 538
Query: 393 ALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKL-----YDELLKKGI---LLRD 444
AL++ +M+E V PD TYSVL+ L A++L Y+E + + L +
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 445 DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEA 503
+ S + S+ + C G ++A++ F ++ K D T+Y I+I GHC+ G
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
Y L M++ F + +L+ L ++G+
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 259/531 (48%), Gaps = 70/531 (13%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++ IRS R F E+V F M VSP+V T+N L+ G ++A ++FD+M
Sbjct: 176 LDATIRS-KRNISFAENV--FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM- 231
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
T G P+ T+N LI G+CK +DDGF+ + M+ +P++++YN +++G+CR G++
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K V+ M ++ L D V+Y TL++GYC + N +ALV+ EM+ GL P+ +TY
Sbjct: 292 KEVSFVLTEMNRRGYSL--DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI +C+ +++ E L+ + V G P+ T TL++G G +NEA +V +M +
Sbjct: 350 SLIHSMCKAGNMNRAMEFLD-QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
P TY+ L+ C G E A + +++ +KG+ +P V +Y ++ C
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL-------SPDVVSYSTVLSGFC 461
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
++ +A R R+++++G + D +Y LI G C++ + +L MLR PD
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV-L 580
Y +LI+ +G+ A Q +M++ ++P T+ ++ GL K+ E+ L++ L
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 581 LLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLE 640
E + +VT HT+
Sbjct: 582 FYEESVPSDVTY--HTL------------------------------------------- 596
Query: 641 ANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQP 691
+E NI+ ++I+G C ++EA ++ ++ K NH+P
Sbjct: 597 --------IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK-NHKP 638
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 236/495 (47%), Gaps = 34/495 (6%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF--F 163
AL F+ + G N +Y +++ + R ++ L S+ K LE +
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG-----LEPNLISY 278
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N +I R G +E + T M G S VT+N+L+ K G + A + EML
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+G+ P T+ LI CK ++ F +M P+ TY TLVDG + G +
Sbjct: 339 -HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A+ V++ M +P VV+Y L+ G+C+ +++A+ V E+M +KGL P+ V+Y+T
Sbjct: 398 EAYRVLREM--NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
++ G C +D+ V +E G PDT T ++L+ G C EA ++E+M+
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVE-KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
+ PD TY+ L+ C GD E+A +L++E+++KG+L P V Y + L K
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL-------PDVVTYSVLINGLNK 567
Query: 464 NGKTSKAERGFRQLMKRGT--QDPTSYKI--------------LIIGHCKEGTFEAGYEL 507
+T +A+R +L + D T + + LI G C +G ++
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
ML +N PD Y +I G + G+ AY ++M+KS + T T +++ L K
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
Query: 568 KGYAHESASLVVLLL 582
+G +E S++V +L
Sbjct: 688 EGKVNELNSVIVHVL 702
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 175/601 (29%), Positives = 266/601 (44%), Gaps = 31/601 (5%)
Query: 106 ALKFFNWL---PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN------GTV 156
ALKF W+ P + H Q + IL RAR + AR+ L + S G +
Sbjct: 53 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 112
Query: 157 KLEDRFFNS-------LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
R NS LIR Y R G+ Q+S+++F M G +PSV T N++L ++K G
Sbjct: 113 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 172
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
S EML + PD TFNILI C + QKM P IVTY
Sbjct: 173 EDVSVWSFLKEMLKR-KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
NT++ C+ G+ K A ++ M KS+ ++ DV +Y L+ C I + ++ +M
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHM--KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
+ + PN VTYNTLI G K+ ++L L G SP+ T N L++GH + GN
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGN 348
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
EALK+F M + P +Y VL+ LC +F+ A Y + + G+ +
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR----- 403
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELL 508
Y M LCKNG +A ++ K G D +Y LI G CK G F+ E++
Sbjct: 404 --ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Query: 509 VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
+ R P+ IY +LI + G A + + M+ TF+ ++ L K
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 569 GYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY---MVDM 625
G E+ + + I N + ++G K F + + G+
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 626 KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVE 685
L+ L + L EA K L +D M NT++ +CK L++A L+ E+V+
Sbjct: 582 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 641
Query: 686 K 686
+
Sbjct: 642 R 642
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 163/625 (26%), Positives = 290/625 (46%), Gaps = 31/625 (4%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+ALK F + G T ++ SY ++L+ L + ++AR F +KR NG V + +
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR--NG-VCVGRITYT 407
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+I + G E+V L M G+ P +VT+++L+ K GR AK + +
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G++P+ ++ LI C+ + + R ++ M D T+N LV +C+AGKV
Sbjct: 468 -GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A ++ M S+ + P+ VS+ L+ GY +A VF+EM G P TY +L
Sbjct: 527 AEEFMRCMT--SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+KGLC+ + + ++ L+ +L + DT NTL+ C +GNL +A+ +F +M++
Sbjct: 585 LKGLCKGGHLREAEKFLK-SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
+ PDS TY+ L+ LC G A E +G +L P Y + K
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL------PNKVMYTCFVDGMFKA 697
Query: 465 GKTSKAERGFRQLMKR--GTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
G+ KA FR+ M T D + +I G+ + G E +LL M +N P+
Sbjct: 698 GQW-KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL- 581
Y L+ G ++ + ++ + ++ + I+P T HS++ G+ ES L + L
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC------ESNMLEIGLK 810
Query: 582 -LEGKIRQNVTLSTHTVRLLFS----NGLRDKGFRIVGLLYDNGYMVD---MKELIIFLS 633
L+ I + V + +T +L S NG + F +V ++ G +D ++ L+
Sbjct: 811 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 870
Query: 634 QSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLS 693
++ + E+ +L ++ + + +I GLC++ + AF + E++ P
Sbjct: 871 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930
Query: 694 CLENLRVALEAGGRSKEVEFLSKRM 718
+ AL G++ E L + M
Sbjct: 931 AESAMVRALAKCGKADEATLLLRFM 955
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 248/529 (46%), Gaps = 30/529 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN+LI + G F+E++K+F M++ G++PS V++ LL L K ++A+ + M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
GV T+ +I G CKN +D+ +MS DPDIVTY+ L++G C+ G+
Sbjct: 396 RN-GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
KTA +V + + L+P+ + Y+TL+ C + EA+ ++E M+ +G + T+N
Sbjct: 455 KTAKEIVCRIYRVG--LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L+ LC+ K+ + +E + + G P+T + + L+NG+ N+G +A VF++M +
Sbjct: 513 VLVTSLCKAGKVAEAEEFMR-CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV---AAYKSMFQ 459
P TY L++ LC G AEK L+ + P Y ++
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEK----------FLKSLHAVPAAVDTVMYNTLLT 621
Query: 460 FLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEG-TFEAGYELLVLMLRRNFD 517
+CK+G +KA F ++++R D +Y LI G C++G T A R N
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681
Query: 518 PDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
P+ +Y +DG+ + G+ ++M P T ++++ G + G ++
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND- 740
Query: 578 VVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYD----NGYMVD---MKELII 630
LL QN + T +L + K LLY NG + D L++
Sbjct: 741 ---LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 797
Query: 631 FLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGL 679
+ +S L K+L + + +D N +I C +++ AF L
Sbjct: 798 GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/532 (23%), Positives = 239/532 (44%), Gaps = 52/532 (9%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA F+ + ++G +Y +L+ L + +L A FL S+ ++ +N
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP---AAVDTVMYN 617
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+L+ + ++G ++V LF M + P T+ SL+ L ++G+T +A E +
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
V P+ + + G K G F ++M + PDIVT N ++DG R GK++
Sbjct: 678 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 737
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
++++ M +++ P++ +Y LL GY ++++ + +++ ++ G+ P+ +T ++L
Sbjct: 738 TNDLLPEM--GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK--------- 395
+ G+CE ++ ++L+ A G D T N L++ C G +N A
Sbjct: 796 VLGICESNMLEIGLKILK-AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854
Query: 396 --------------------------VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
V +M + + P+S Y L+ LC +GD + A
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK-RGTQDPTSY 488
+ +E++ I P A +M + L K GK +A R ++K + S+
Sbjct: 915 VVKEEMIAHKI-------CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASF 967
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
L+ CK G EL V+M D Y LI GL KG+ LA++ ++M
Sbjct: 968 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHESASLVV--LLLEGKIRQNVTLSTHTVR 598
+ +T+ +++ GLL + A A +++ LL G I +++LS + R
Sbjct: 1028 DGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI-TSMSLSQDSHR 1078
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/566 (24%), Positives = 243/566 (42%), Gaps = 81/566 (14%)
Query: 160 DRF-FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
D F FN L+ S +AG E+ + M S G+ P+ V+F+ L+ G A SVF
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
DEM + G P +T+ L++G CK + + +F + + + D V YNTL+ +C+
Sbjct: 567 DEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG-LKPN 337
+G + A ++ MV++S + PD +YT+L+ G C K A++ +E +G + PN
Sbjct: 626 SGNLAKAVSLFGEMVQRS--ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
V Y + G+ + + K ++ G +PD T N +++G+ G + + +
Sbjct: 684 KVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
+M P+ TY++L+ D + LY ++ GIL P S+
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL-------PDKLTCHSL 795
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLM----- 511
+C++ + + + RG + D ++ +LI C G ++L+ +M
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 512 -------------LRRN-----------------FDPDSEIYQSLIDGLLQKGEPLLAYQ 541
L RN P+S Y LI+GL + G+ A+
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915
Query: 542 TLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLF 601
++M+ I P +++ L K G A E+ L+ +L+ K+ T+++ T
Sbjct: 916 VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP--TIASFTT---- 969
Query: 602 SNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCN 661
++ L NG +++ EL + +S C K +D+ N
Sbjct: 970 ----------LMHLCCKNGNVIEALELRVVMSN-------------CGLK---LDLVSYN 1003
Query: 662 TVIEGLCKMKKLSEAFGLYYELVEKG 687
+I GLC ++ AF LY E+ G
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDG 1029
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 190/694 (27%), Positives = 306/694 (44%), Gaps = 96/694 (13%)
Query: 101 KVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLED 160
K+ S+A F L G + S L+L+ L + + V N +I LE
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI---------LES 173
Query: 161 RFFNSLIRSYGRAGLFQESVKL---------FTSMKSVGVSPSVVTFNSLLLILLKRGRT 211
F S YG+A Q +VKL F MK + PSV +N L+ L K R
Sbjct: 174 DFRPSKFM-YGKA--IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 212 NMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNT 271
N A+ +FDEML+ + P T+N LI G+CK + F+ ++M + + +P ++T+NT
Sbjct: 231 NDAEQLFDEMLARR-LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
L+ G+ +AG V+ A NV+K M K PD +++ L GY + + AL V+E VD
Sbjct: 290 LLKGLFKAGMVEDAENVLKEM--KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
G+K NA T + L+ LC+ KI+K +E+L G G P+ NT+++G+C G+L
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEIL-GREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL---------- 441
A E M + ++PD Y+ L+R C +G+ E AEK +++ KG+
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 442 ------------------LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ 483
+ D+G+ P V +Y ++ LCK K +A+ R + RG
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 484 DPTS-YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQT 542
Y +LI G C +G E + ML++ + + Y +LIDGL G+ A
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 543 LQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFS 602
L ++ + + P T++S+++G G+A + L E K R + + T LL S
Sbjct: 587 LLEISRKGLKPDVFTYNSLISGY---GFAGNVQRCIALYEEMK-RSGIKPTLKTYHLLIS 642
Query: 603 -----------------------------------NGLRDKGFRIVGLLYDNGYMVD--- 624
+G +K F + + + +D
Sbjct: 643 LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Query: 625 MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELV 684
LI+ + KL E L+ + + D N +++G C++K A+ Y E+
Sbjct: 703 YNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQ 762
Query: 685 EKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRM 718
EKG + L L+ RSKE E + M
Sbjct: 763 EKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 216/434 (49%), Gaps = 21/434 (4%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+N++I Y R G + +M+ G+ P + +N L+ + G A+ ++M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
GV+P T+NILI G+ + D F ++M P++V+Y TL++ +C+ K
Sbjct: 451 -KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ A V + M + ++P V Y L+ G C K I++A +EM+ KG++ N VTY
Sbjct: 510 LLEAQIVKRDMEDRG--VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVG--GFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
NTLI GL K+ + +++L LE+ G PD T N+L++G+ AGN+ + ++E+
Sbjct: 568 NTLIDGLSMTGKLSEAEDLL---LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M ++P TY +L+ +LC E E+L+ E+ K P + Y +
Sbjct: 625 MKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLK----------PDLLVYNGVLH 673
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
+G KA +Q++++ D T+Y LI+G K G L+ M R +P
Sbjct: 674 CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
+++ Y ++ G + + + AY ++M + + + +++G LK+ + + A +V
Sbjct: 734 EADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG-LKEEWRSKEAEIV 792
Query: 579 VLLLEGKIRQNVTL 592
+ + G++ +VT+
Sbjct: 793 ISEMNGRMLGDVTV 806
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 230/505 (45%), Gaps = 48/505 (9%)
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
N + LED N+ +R R G +E K +M G P ++ +L+ + G+T
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
A + E+L G PD T+N++I G+CK +++ +MS PD+VTYNT+
Sbjct: 155 KAAKIL-EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTI 210
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK 332
+ +C +GK+K A V+ M+++ D PDV++YT L+ C + A+ + +EM D+
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQR--DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG------------------------ 368
G P+ VTYN L+ G+C+ ++D+ + L G
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 369 ----------GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
GFSP T N L+N C G L A+ + EKM + QP+S +Y+ L+
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
C +RA + + ++ +G P + Y +M LCK+GK A QL
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCY-------PDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 479 KRGTQDP-TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
+G +Y +I G K G +LL M ++ PD+ Y SL+ GL ++G+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 538 LAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTV 597
A + + + I P TF+SI+ GL K + +V ++ + N T T +
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 598 RLLFSNGLRDKGFRIVGLLYDNGYM 622
L G+ + ++ L + G M
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLM 586
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 221/474 (46%), Gaps = 17/474 (3%)
Query: 218 FDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVC 277
F E + +G PD LIRGFC+ + + + PD++TYN ++ G C
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 278 RAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPN 337
+AG++ A +V+ M ++PDVV+Y T+LR C + +A+ V + M+ + P+
Sbjct: 184 KAGEINNALSVLDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
+TY LI+ C + ++L+ + G +PD T N L+NG C G L+EA+K
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLD-EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
M QP+ T+++++R++C G + AEKL ++L+KG +P V + +
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF-------SPSVVTFNIL 350
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNF 516
FLC+ G +A ++ + G Q + SY L+ G CKE + E L M+ R
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 517 DPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESAS 576
PD Y +++ L + G+ A + L ++ P T+++++ GL K G ++
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 577 LVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLS 633
L+ + ++ + + V L G D+ + G V +++ L
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 634 QSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+SR+ A L+F + + + +IEGL EA L EL KG
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 218/454 (48%), Gaps = 18/454 (3%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA K L G + +Y +M+ +A +N N L + R S V + +N
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN---NALSVLDRMS---VSPDVVTYN 208
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+++RS +G ++++++ M P V+T+ L+ + A + DEM
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RD 267
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G PD T+N+L+ G CK +D+ +F M S C P+++T+N ++ +C G+
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A ++ M++K +P VV++ L+ C K + A+ + E+M G +PN+++YN L
Sbjct: 328 AEKLLADMLRKG--FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ G C+ +K+D+ E LE + G + PD T NT++ C G + +A+++ ++
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
P TY+ ++ L G +A KL DE+ K + P Y S+ L +
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL-------KPDTITYSSLVGGLSRE 497
Query: 465 GKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
GK +A + F + + G + + ++ +++G CK + + LV M+ R P+ Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
LI+GL +G A + L ++ ++ +S
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 177/401 (44%), Gaps = 36/401 (8%)
Query: 319 IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
++E E MV G P+ + TLI+G C + K K ++LE LE G PD T N
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILEGSGAVPDVITYN 176
Query: 379 TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
+++G+C AG +N AL V ++M V PD TY+ ++R+LC G ++A ++ D +L++
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 439 GIL----------------------------LRDDGSTPLVAAYKSMFQFLCKNGKTSKA 470
+RD G TP V Y + +CK G+ +A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 471 ERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
+ + G Q + ++ I++ C G + +LL MLR+ F P + LI+
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQN 589
L +KG A L+KM + P + +++ +L G K+ + + ++ +
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 590 VTLSTHTVRLLFSNGLRDKGFRIVGLLYDNG---YMVDMKELIIFLSQSRKLLEANKLLL 646
+ + L +G + I+ L G ++ +I L+++ K +A KLL
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 647 FCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
K D ++++ GL + K+ EA ++E G
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 136/333 (40%), Gaps = 13/333 (3%)
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
G L E K E M+ PD + L+R C +G +A K+ + +L G+
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE-------ILEGSGA 168
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYEL 507
P V Y M CK G+ + A ++ + D +Y ++ C G + E+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV--SPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
L ML+R+ PD Y LI+ + A + L +M P T++ ++ G+ K
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY---MVD 624
+G E+ + + + NV +R + S G +++ + G+ +V
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 625 MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELV 684
LI FL + L A +L + + N ++ G CK KK+ A +V
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 685 EKGNHQPLSCLENLRVALEAGGRSKE-VEFLSK 716
+G + + + AL G+ ++ VE L++
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 239/503 (47%), Gaps = 52/503 (10%)
Query: 113 LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR--KSNGTVKLEDRFFNSLIRSY 170
+ +G HN +Y +++ R L +A L + + V L +SL+ Y
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL-----SSLLNGY 161
Query: 171 GRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPD 230
+ E+V L M G P+ VTFN+L+ L + + A ++ D M++ G PD
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPD 220
Query: 231 TYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVK 290
T+ +++ G CK D F KM +P ++ YNT++DG+C+ + A N+ K
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 291 GMVKKS---------------------------------EDLNPDVVSYTTLLRGYCMKQ 317
M K +NPDV +++ L+ + +
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 318 NIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTL 377
+ EA +++EMV + + P+ VTY++LI G C ++D+ K++ E + F PD T
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTY 399
Query: 378 NTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLK 437
NTL+ G C + E ++VF +M + + ++ TY++L++ L GD + A++++ E++
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 438 KGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGH 495
DG P + Y ++ LCKNGK KA F + ++R +PT +Y I+I G
Sbjct: 460 -------DGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGM 511
Query: 496 CKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTT 555
CK G E G++L + + PD Y ++I G +KG A ++M + +P +
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 556 STFHSILAGLLKKGYAHESASLV 578
+++++ L+ G SA L+
Sbjct: 572 GCYNTLIRARLRDGDREASAELI 594
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/628 (24%), Positives = 268/628 (42%), Gaps = 86/628 (13%)
Query: 126 FLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGL----FQESVK 181
F+ ++ R V+ +F F +R +G + R R GL ++V
Sbjct: 14 FVHRSLVVRGNAATVSPSFSFFWRRAFSGKTSYDYR------EKLSRNGLSELKLDDAVA 67
Query: 182 LFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGF 241
LF M PS++ F+ LL + K + ++ S+ ++M G+ + YT++ILI F
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYSILINCF 126
Query: 242 CKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV-------- 293
C+ S + KM +P+IVT ++L++G C + ++ A +V M
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 294 --------------KKSEDL-----------NPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
K SE + PD+V+Y ++ G C + + D A + +
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
M L+P + YNT+I GLC+ + +D + + +E G P+ T ++L++ CN G
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK-EMETKGIRPNVVTYSSLISCLCNYG 305
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
++A ++ M+E K+ PD T+S L+ G AEKLYDE++K+ I
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-------D 358
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEAGYEL 507
P + Y S+ C + + +A++ F ++ K D +Y LI G CK E G E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M +R ++ Y LI GL Q G+ +A + ++M+ + P T++++L GL K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE 627
G ++ + L K+ + + + G + G+
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD---------------- 522
Query: 628 LIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+F + S K ++ D+ NT+I G C+ EA L+ E+ E G
Sbjct: 523 --LFCNLSLKGVKP--------------DVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 688 NHQPLSCLENL-RVALEAGGRSKEVEFL 714
C L R L G R E +
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELI 594
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 209/441 (47%), Gaps = 44/441 (9%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN+LI E++ L M + G P +VT+ ++ L KRG T++A ++ ++M
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM- 247
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ P +N +I G CK +DD F++M + P++VTY++L+ +C G+
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 283 KTAHNVVKGMVKKS---------------------------------EDLNPDVVSYTTL 309
A ++ M+++ ++P +V+Y++L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+ G+CM +DEA +FE MV K P+ VTYNTLIKG C+ +++++ EV + G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR-EMSQRG 426
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
+T T N L+ G AG+ + A ++F++M+ V P+ TY+ L+ LC G E+A
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSY 488
+++ L + + P + Y M + +CK GK F L +G + D +Y
Sbjct: 487 VVFEYLQRSKM-------EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
+I G C++G+ E L M P+S Y +LI L+ G+ + + +++M
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 549 SSIVPTTSTFHSILAGLLKKG 569
ST ++ +L G
Sbjct: 600 CGFAGDASTI-GLVTNMLHDG 619
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 243/468 (51%), Gaps = 16/468 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+LI +Y GL +E+ +L +M G SP V T+N+++ L K G+ AK VF EML
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ G++PD+ T+ L+ CK V + + F M S + PD+V +++++ R+G +
Sbjct: 333 RS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + K L PD V YT L++GYC K I A+ + EM+ +G + VTYN
Sbjct: 392 DKALMYFNSV--KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
T++ GLC+ + + + ++ E F PD+ TL L++GHC GNL A+++F+KM E
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+++ D TY+ L+ +GD + A++++ +++ K IL P +Y + LC
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL-------PTPISYSILVNALC 561
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTSY--KILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
G ++A R + +++ + + PT +I G+C+ G G L M+ F PD
Sbjct: 562 SKGHLAEAFRVWDEMISKNIK-PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKM--LKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
Y +LI G +++ A+ ++KM + +VP T++SIL G ++ E+ ++
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 579 VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMK 626
++E + + + T + S + FRI + G+ D K
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/604 (25%), Positives = 284/604 (47%), Gaps = 36/604 (5%)
Query: 118 FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLE---------------DRF 162
F H S M+ IL R+ L+ A++ L + R+S G +LE D
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRS-GVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F+ LIR+Y +A +E+ + FT ++S G + S+ N+L+ L++ G +A V+ E +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE-I 226
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S GV + YT NI++ CK+ ++ F ++ PDIVTYNTL+ G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ A ++ M K +P V +Y T++ G C + A VF EM+ GL P++ TY
Sbjct: 287 EEAFELMNAMPGKG--FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+L+ C+ + + ++V + PD +++M+ +GNL++AL F + E
Sbjct: 345 SLLMEACKKGDVVETEKVFSD-MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD+ Y++L++ C G A L +E+L++G + V Y ++ LC
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD-------VVTYNTILHGLC 456
Query: 463 KNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K +A++ F ++ +R D + ILI GHCK G + EL M + D
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y +L+DG + G+ A + M+ I+PT ++ ++ L KG+ E+ + +
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KELIIFLSQSRKL 638
+ I+ V + ++ +G G + + G++ D LI + +
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636
Query: 639 LEANKLLLFCLEKHHNI--DIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG---NHQPLS 693
+A L+ E+ + D+ N+++ G C+ ++ EA + +++E+G + +
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 694 CLEN 697
C+ N
Sbjct: 697 CMIN 700
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 177/379 (46%), Gaps = 51/379 (13%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KAL +FN + + G + N +++I
Sbjct: 393 KALMYFNSVKEAGL---------------------IPDNVIYTI---------------- 415
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI+ Y R G+ ++ L M G + VVT+N++L L KR A +F+EM +
Sbjct: 416 -LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TE 473
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ PD+YT ILI G CK + + FQKM D+VTYNTL+DG + G + T
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + MV S+++ P +SY+ L+ C K ++ EA V++EM+ K +KP + N++
Sbjct: 534 AKEIWADMV--SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
IKG C + LE + GF PD + NTL+ G N+++A + +KM E +
Sbjct: 592 IKGYCRSGNASDGESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 405 --VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD TY+ ++ C + AE + +++++G+ P + Y M
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV-------NPDRSTYTCMINGFV 703
Query: 463 KNGKTSKAERGFRQLMKRG 481
++A R ++++RG
Sbjct: 704 SQDNLTEAFRIHDEMLQRG 722
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 142/275 (51%), Gaps = 9/275 (3%)
Query: 101 KVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRAR--NLNVARNFLFSIKRKSNGTVKL 158
K+ +A K FN + + + SY L + I G + NL A +K K ++L
Sbjct: 459 KMLGEADKLFNEMTERALFPD--SYTLTILIDGHCKLGNLQNAMELFQKMKEKR---IRL 513
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
+ +N+L+ +G+ G + +++ M S + P+ ++++ L+ L +G A V+
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
DEM+S + P N +I+G+C++ DG F +KM S PD ++YNTL+ G R
Sbjct: 574 DEMISK-NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
+ A +VK M ++ L PDV +Y ++L G+C + + EA VV +M+++G+ P+
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
TY +I G + + + + L+ GFSPD
Sbjct: 693 STYTCMINGFVSQDNLTEAFRIHDEMLQ-RGFSPD 726
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 233/456 (51%), Gaps = 15/456 (3%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
GFTHN +Y +L L RAR + + + + R S +K + F L+R+YG AG +
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADL-RNSYPPIKCGENLFIDLLRNYGLAGRY 136
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
+ S+++F + GV SV + N+LL +L++ R ++ ++F ++G+ P+ +T N+
Sbjct: 137 ESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNL 196
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
L++ CK + ++ ++ ++ S P++VTY T++ G G +++A V++ M+ +
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
PD +YT L+ GYC EA V ++M ++PN VTY +I+ LC+ +K +
Sbjct: 257 --WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
+ + + LE F PD+ +++ C ++EA ++ KM++ PD+A S L+
Sbjct: 315 ARNMFDEMLE-RSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
LC G A KL+DE K GS P + Y ++ +C+ G+ ++A R +
Sbjct: 374 HWLCKEGRVTEARKLFDEFEK--------GSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 477 LMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
+ +R + + +Y +LI G K G + G +L ML P+ + L +GL + G+
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 536 PLLAYQTLQKMLKSSIVPTTST--FHSILAGLLKKG 569
A + + + + V S F AG L KG
Sbjct: 486 EEDAMKIVSMAVMNGKVDKESWELFLKKFAGELDKG 521
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 161/356 (45%), Gaps = 15/356 (4%)
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
TY++++ + RA +++ + + + LLR Y + + ++ +F
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFL 144
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
+ D G+K + + NTL+ L + Q+ D + + + + E G +P+ T N L+ C
Sbjct: 145 RIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKK 204
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
++ A KV +++ + P+ TY+ ++ GD E A+++ +E+L D G
Sbjct: 205 NDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML-------DRGW 257
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYE 506
P Y + CK G+ S+A + K + + +Y ++I CKE
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 507 LLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLL 566
+ ML R+F PDS + +ID L + + A +KMLK++ +P + +++ L
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 567 KKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG-FRIVGLLYDNGY 621
K+G E+ L +G I +T +T G+ +KG G L+D+ Y
Sbjct: 378 KEGRVTEARKLFDEFEKGSIPSLLTYNTLIA------GMCEKGELTEAGRLWDDMY 427
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/630 (25%), Positives = 284/630 (45%), Gaps = 58/630 (9%)
Query: 106 ALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
ALKFF W Q + H+ Y+ MLE+L + + +R L +KR+ G + + F
Sbjct: 190 ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRR--GIYRTPEAFSR 247
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++ SY RAG ++++K+ T M+ GV P+++ N+ + + ++ R A F E +
Sbjct: 248 VMV-SYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR-FLERMQV 305
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G+ P+ T+N +IRG+C V++ + M S C PD V+Y T++ +C+ ++
Sbjct: 306 VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVE 365
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK--------- 335
+++K M K+ L PD V+Y TL+ + DEAL ++ +KG +
Sbjct: 366 VRDLMKKMAKE-HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 336 ---------------------------PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
P+ VTY ++ G C + ++DK K++L+ +
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ-VMHTH 483
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G P+T + L+NG C G EA ++ E P+S TYSV++ L G A
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTS 487
+ E++ KG P + Q LC++G+T +A + + + +G + +
Sbjct: 544 CDVVREMVLKGFF-------PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
+ +I G C+ +A +L M N D Y +L+D L +KG A + ++KML
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 548 KSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV-TLSTHTVRLLFSNGLR 606
I PT T+ +++ + G + LV +L + RQ T+ + L G
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDD---LVAILEKMISRQKCRTIYNQVIEKLCVLGKL 713
Query: 607 DKGFRIVGLLYDNGYMVDMKELIIFLSQSRK---LLEANKLLLFCLEKHHNIDIDMCNTV 663
++ ++G + D K + K L A K+ ++ D+ MC +
Sbjct: 714 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 773
Query: 664 IEGLCKMKKLSEAFGLYYELVEKGNHQPLS 693
+ L K+ EA L LVE+G+ P S
Sbjct: 774 SKRLVLKGKVDEADKLMLRLVERGHISPQS 803
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 222/481 (46%), Gaps = 17/481 (3%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A++ + G + SY+ ++ L + + + R+ + + K +G V + +N
Sbjct: 330 EAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA-KEHGLVP-DQVTYN 387
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+LI + E++ + G + +++++ L K GR + AK + +EMLS
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
PD T+ ++ GFC+ VD + Q M + P+ V+Y L++G+CR GK
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 285 AHNVVKGMVKKSED--LNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M+ SE+ +P+ ++Y+ ++ G + + EA V EMV KG P V N
Sbjct: 508 A----REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEIN 563
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L++ LC + + ++ +E L G + + T+++G C L+ AL V + M
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLN-KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 622
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
D TY+ LV L G A +L ++L KGI P Y+++ C
Sbjct: 623 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI-------DPTPVTYRTVIHRYC 675
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
+ GK +++ R + T Y +I C G E LL +LR D++
Sbjct: 676 QMGKVDDLVAILEKMISR-QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKT 734
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL 582
+L++G L+KG PL AY+ +M +++P + L+ KG E+ L++ L+
Sbjct: 735 CYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLV 794
Query: 583 E 583
E
Sbjct: 795 E 795
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 169/627 (26%), Positives = 282/627 (44%), Gaps = 82/627 (13%)
Query: 96 VLRLIKVPSKALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNG 154
V++ K P KAL+ FN + ++GF H +Y ++E LG L + R++ G
Sbjct: 13 VIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVG 71
Query: 155 TVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMA 214
LE + ++ ++YGR G QE+V +F M P+V ++N+++ +L+ G + A
Sbjct: 72 NHMLEGVYVGAM-KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQA 130
Query: 215 KSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVD 274
V+ M G+ PD Y+F I ++ FCK S R MSS C+ ++V Y T+V
Sbjct: 131 HKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 275 G-----------------------------------VCRAGKVKTAHNVVKGMVKKSEDL 299
G +C+ G VK ++ ++K+ +
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG--V 247
Query: 300 NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKE 359
P++ +Y ++G C + +D A+ + ++++G KP+ +TYN LI GLC+ K + E
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE-AE 306
Query: 360 VLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
V G + G PD+ T NTL+ G+C G + A ++ + PD TY L+ L
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 420 CHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK 479
CH G+ RA L++E L KGI P V Y ++ + L G +A + ++ +
Sbjct: 367 CHEGETNRALALFNEALGKGI-------KPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 480 RG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLL 538
+G + ++ IL+ G CK G L+ +M+ + + PD + LI G + +
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 539 AYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVR 598
A + L ML + + P T++S+L GL K + ++E N
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN--------- 530
Query: 599 LLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDID 658
LF+ F I L+ L + RKL EA LL K N D
Sbjct: 531 -LFT-------FNI---------------LLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 659 MCNTVIEGLCKMKKLSEAFGLYYELVE 685
T+I+G CK L A+ L+ ++ E
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 228/460 (49%), Gaps = 27/460 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+LI Y + G+ Q + ++ G P T+ SL+ L G TN A ++F+E L
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ P+ +N LI+G M+ + + +MS P++ T+N LV+G+C+ G V
Sbjct: 384 GK-GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +VK M+ K PD+ ++ L+ GY + ++ AL + + M+D G+ P+ TYN
Sbjct: 443 SDADGLVKVMISKG--YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+L+ GLC+ K + + E + +E G +P+ T N L+ C L+EAL + E+M
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVE-KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V PD+ T+ L+ C GD + A L+ ++ + + STP Y +
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA---YKVSSSTP---TYNIIIHAFT 613
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ + AE+ F++++ R D +Y++++ G CK G GY+ L+ M+ F P
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
+I+ L + A + +M++ +VP + + + KK A L+
Sbjct: 674 TLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV---NTICDVDKKEVAAPK-----LV 725
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRD------KGFRIVGL 615
LE ++++ ++ + LLF +GLRD KGF +V +
Sbjct: 726 LEDLLKKS-CITYYAYELLF-DGLRDKRLRKKKGFTVVAI 763
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 154/592 (26%), Positives = 266/592 (44%), Gaps = 58/592 (9%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNV-ARNFLFSIKRKSNGTVKLEDR 161
P AL+ N + G N +Y ++G N A + K ++G V L
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAY---CTVVGGFYEENFKAEGYELFGKMLASG-VSLCLS 217
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
FN L+R + G +E KL + GV P++ T+N + L +RG + A + +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ G PD T+N LI G CKNS + + KM + +PD TYNTL+ G C+ G
Sbjct: 278 IEQ-GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
V+ A +V V PD +Y +L+ G C + + AL +F E + KG+KPN + Y
Sbjct: 337 VQLAERIVGDAVFNG--FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
NTLIKGL I + + L + G P+ T N L+NG C G +++A + + M+
Sbjct: 395 NTLIKGLSNQGMILEAAQ-LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
PD T+++L+ E A ++ D +L D+G P V Y S+ L
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVML-------DNGVDPDVYTYNSLLNGL 506
Query: 462 CKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
CK K ++ ++++G + ++ IL+ C+ + LL M ++ +PD+
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKS-SIVPTTSTFHSILAGLLKKGYAHESASLVV 579
+ +LIDG + G+ AY +KM ++ + +T T++ I+ +K + ++
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEK----LNVTMAE 622
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSN----GLRDKGFRIVGLLYDNGYMVDMKELIIFLSQS 635
L + + + + +T RL+ G + G++ + + +NG++ + L
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL------- 675
Query: 636 RKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
VI LC ++ EA G+ + +V+KG
Sbjct: 676 -------------------------GRVINCLCVEDRVYEAAGIIHRMVQKG 702
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 235/515 (45%), Gaps = 15/515 (2%)
Query: 178 ESVKLFTSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
+++++F SM K VG ++ T+ S++ L G+ + V +M G +
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
++ + + V + F++M ++C+P + +YN ++ + +G AH V M +
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM--RD 139
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
+ PDV S+T ++ +C AL + M +G + N V Y T++ G E +
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE-ENFKA 198
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
L G + G S T N L+ C G++ E K+ +K+++ V P+ TY++ +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
+ LC G+ + A ++ L+++G P V Y ++ LCKN K +AE +
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQG-------PKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 477 LMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
++ G + D +Y LI G+CK G + ++ + F PD Y+SLIDGL +GE
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 536 PLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTH 595
A + L I P +++++ GL +G E+A L + E + V
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 596 TVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFL---SQSRKLLEANKLLLFCLEKH 652
V L G +V ++ GY D+ I + S K+ A ++L L+
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 653 HNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ D+ N+++ GLCK K + Y +VEKG
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 166/380 (43%), Gaps = 15/380 (3%)
Query: 314 CMKQNIDEALVVFEEMVDK-GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE-VGGFS 371
C K + +AL +F M + G K TY ++I+ L K + ++EVL E VG
Sbjct: 16 CQKDPM-KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHM 74
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKL 431
+ + + N + G + EA+ VFE+M + +P +Y+ ++ L G F++A K+
Sbjct: 75 LEGVYVGAMKN-YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKV 133
Query: 432 YDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKIL 491
Y + +RD G TP V ++ + CK + A R + +G +
Sbjct: 134 Y-------MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 492 IIGHCKEGTFEA-GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSS 550
++G E F+A GYEL ML + L+ L +KG+ + L K++K
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246
Query: 551 IVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
++P T++ + GL ++G + +V L+E + +V + + L N +
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 611 RIVGLLYDNGYMVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGL 667
+G + + G D LI + + A +++ + D ++I+GL
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 668 CKMKKLSEAFGLYYELVEKG 687
C + + A L+ E + KG
Sbjct: 367 CHEGETNRALALFNEALGKG 386
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 230/474 (48%), Gaps = 15/474 (3%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
L F L G HN + +M+ R A + L + + + + FN+
Sbjct: 97 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG---YEPDTTTFNT 153
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI+ G E+V L M G P VVT+NS++ + + G T++A + +M
Sbjct: 154 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EER 212
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
V D +T++ +I C++ +D F++M + +VTYN+LV G+C+AGK
Sbjct: 213 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 272
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++K MV S ++ P+V+++ LL + + + EA +++EM+ +G+ PN +TYNTL+
Sbjct: 273 ALLLKDMV--SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 330
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
G C ++ + +L+ + SPD T +L+ G+C +++ +KVF + + +
Sbjct: 331 DGYCMQNRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 389
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
++ TYS+LV+ C G + AE+L+ E++ G+L P V Y + LC NG
Sbjct: 390 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-------PDVMTYGILLDGLCDNG 442
Query: 466 KTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
K KA F L K Y +I G CK G E + L + + P+ Y
Sbjct: 443 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 502
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
+I GL +KG A L+KM + P T+++++ L+ G SA L+
Sbjct: 503 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 556
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 235/447 (52%), Gaps = 15/447 (3%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S+A+ + + + G + +Y ++ + R+ + ++A + L ++ ++ VK + +
Sbjct: 165 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN---VKADVFTY 221
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+++I S R G ++ LF M++ G+ SVVT+NSL+ L K G+ N + +M+S
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 281
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ P+ TFN+L+ F K + + +++M + P+I+TYNTL+DG C ++
Sbjct: 282 RE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 340
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A+N++ MV+ +PD+V++T+L++GYCM + +D+ + VF + +GL NAVTY+
Sbjct: 341 EANNMLDLMVRNK--CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 398
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L++G C+ KI K+ E L + G PD T L++G C+ G L +AL++FE + +
Sbjct: 399 LVQGFCQSGKI-KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 457
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
K+ Y+ ++ +C G E A L+ L KG+ P V Y M LCK
Sbjct: 458 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV-------KPNVMTYTVMISGLCK 510
Query: 464 NGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
G S+A R++ + G + +Y LI H ++G A +L+ M F D+
Sbjct: 511 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 570
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKS 549
+ +ID LL + L L K KS
Sbjct: 571 IKMVIDMLLSAMKRLTLRYCLSKGSKS 597
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 246/528 (46%), Gaps = 54/528 (10%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
RFF+++ R F + ++ G++ ++ T N ++ + +T A SV +
Sbjct: 83 RFFSAI----ARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 138
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
++ G PDT TFN LI+G V + +M C PD+VTYN++V+G+CR+G
Sbjct: 139 VMK-LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 197
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
A ++++ M + ++ DV +Y+T++ C ID A+ +F+EM KG+K + VT
Sbjct: 198 DTSLALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255
Query: 341 YNTLIKGLCEVQKIDK----IKEVL--------------------EGALEVG-------- 368
YN+L++GLC+ K + +K+++ EG L+
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 369 --GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
G SP+ T NTLM+G+C L+EA + + M+ K PD T++ L++ C + +
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDP 485
K++ + K+G++ Y + Q C++GK AE F++++ G D
Sbjct: 376 DGMKVFRNISKRGLVAN-------AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 428
Query: 486 TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
+Y IL+ G C G E E+ + + D +Y ++I+G+ + G+ A+
Sbjct: 429 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 488
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGL 605
+ + P T+ +++GL KKG E+ L+ + E N +R +G
Sbjct: 489 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 548
Query: 606 RDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANK--LLLFCLEK 651
+++ + G+ D + + + LL A K L +CL K
Sbjct: 549 LTASAKLIEEMKSCGFSADASSIKMVIDM---LLSAMKRLTLRYCLSK 593
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 205/467 (43%), Gaps = 60/467 (12%)
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSE--DLNPDVVS 305
DD FQ+M P +V ++ + R + N+V K+ E + ++ +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQ----FNLVLDFCKQLELNGIAHNIYT 115
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
++ +C A V +++ G +P+ T+NTLIKGL K+ + +++ +
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
E G PD T N+++NG C +G+ + AL + KM E V+ D TYS ++ +LC G
Sbjct: 176 E-NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 234
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQD 484
+ A L+ E+ KGI V Y S+ + LCK GK + + ++ R +
Sbjct: 235 DAAISLFKEMETKGI-------KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287
Query: 485 PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
++ +L+ KEG + EL M+ R P+ Y +L+DG + A L
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 347
Query: 545 KMLKSSIVPTTSTFHSILAG----------------LLKKGYAHESASLVVLLL----EG 584
M+++ P TF S++ G + K+G + + +L+ G
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 407
Query: 585 KIRQNVTLSTHTVRLLFSNGLRDK----GFRIVGLLYDNGYMVDMKELIIFLSQSRKLLE 640
KI+ L+ + + S+G+ G + GL DNG + E+ L +S+
Sbjct: 408 KIK----LAEELFQEMVSHGVLPDVMTYGILLDGLC-DNGKLEKALEIFEDLQKSK---- 458
Query: 641 ANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
++ I M T+IEG+CK K+ +A+ L+ L KG
Sbjct: 459 ------------MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 493
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 228/466 (48%), Gaps = 13/466 (2%)
Query: 158 LEDRFFNSLIRSYGRAGLFQESVKLFTSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAKS 216
L+ SL+ + R ++++K+F M K V +P+ V+++ L+ L + GR A
Sbjct: 228 LDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV 276
+ D+M G P T T+ +LI+ C ++D F F +M C P++ TY L+DG+
Sbjct: 288 LKDQM-GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGL 346
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
CR GK++ A+ V + MVK + + P V++Y L+ GYC + A + M + KP
Sbjct: 347 CRDGKIEEANGVCRKMVK--DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKP 404
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
N T+N L++GLC V K K +L+ L+ G SPD + N L++G C G++N A K+
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLD-NGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
M + ++PD T++ ++ C G + A +L+KGI L + T L+
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG--- 520
Query: 457 MFQFLCKNGKTSKAERGFRQLMK-RGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
+CK GKT A L+K R P S +++ K + +L + +
Sbjct: 521 ----VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESA 575
P Y +L+DGL++ G+ +++ L+ M S +P + I+ GL + G E+
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 576 SLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY 621
L+ + + + N T V+ +NG D+ V + + GY
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 137/530 (25%), Positives = 247/530 (46%), Gaps = 16/530 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++SL+ S + L + + M++ G ++ + +++ L K G T A+ ++L
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS-SFNCDPDIVTYNTLVDGVCRAGK 281
G D++ L+ GFC+ + D + F MS C P+ V+Y+ L+ G+C G+
Sbjct: 223 KI-GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
++ A + M +K P +YT L++ C + ID+A +F+EM+ +G KPN TY
Sbjct: 282 LEEAFGLKDQMGEKG--CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
LI GLC KI++ V ++ F P T N L+NG+C G + A ++ M
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIF-PSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ +P+ T++ L+ LC +G +A L +L D+G +P + +Y + L
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML-------DNGLSPDIVSYNVLIDGL 451
Query: 462 CKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
C+ G + A + + + D ++ +I CK+G + L LMLR+ D
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
+LIDG+ + G+ A L+ ++K I+ T + + IL L K E +++
Sbjct: 512 VTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571
Query: 581 LLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIF---LSQSRK 637
+ + + +V T V L +G FRI+ L+ +G + ++ I L Q +
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 638 LLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ EA KLL + + + +++G KL A +VE+G
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 232/541 (42%), Gaps = 87/541 (16%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVK--LEDRF 162
KA F+ + G N +Y ++++ L R + ++NG + ++DR
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI-----------EEANGVCRKMVKDRI 367
Query: 163 F------NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS 216
F N+LI Y + G + +L T M+ P+V TFN L+ L + G+ A
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV 276
+ ML G++PD ++N+LI G C+ ++ ++ M+ F+ +PD +T+ +++
Sbjct: 428 LLKRMLDN-GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE--------- 327
C+ GK A + M++K L D V+ TTL+ G C +AL + E
Sbjct: 487 CKQGKADVASAFLGLMLRKGISL--DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 328 ---------EMVDKGLK-----------------PNAVTYNTLIKGLCEVQKIDKIKEVL 361
+M+ KG K P+ VTY TL+ GL I +L
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
E +++ G P+ ++NG C G + EA K+ M + V P+ TY+V+V+ +
Sbjct: 605 E-LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 422 IGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ--FLCKNGKTSKAERGFRQLMK 479
G +RA + ++++G L D Y S+ Q L + G + E +
Sbjct: 664 NGKLDRALETVRAMVERGYELND-------RIYSSLLQGFVLSQKGIDNSEESTVSDIAL 716
Query: 480 RGTQDPTSYK------------------ILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
R T DP L+ CKEG + +L+ +L R +
Sbjct: 717 RET-DPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKA 775
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
+ +++ K + + + +LKS VP+ +F ++ GL K+G A + LV+ L
Sbjct: 776 M-DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
Query: 582 L 582
L
Sbjct: 835 L 835
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 189/409 (46%), Gaps = 47/409 (11%)
Query: 218 FDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVC 277
FDE+ +G + ++ L+ K + + +++M + ++ Y T+V+ +C
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 278 RAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK-GLKP 336
+ G + A + ++K L+ + T+LL G+C N+ +AL VF+ M + P
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHI--GTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP 264
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
N+V+Y+ LI GLCEV G L EA +
Sbjct: 265 NSVSYSILIHGLCEV------------------------------------GRLEEAFGL 288
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
++M E QP + TY+VL++ LC G ++A L+DE++ + G P V Y
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR-------GCKPNVHTYTV 341
Query: 457 MFQFLCKNGKTSKAERGFRQLMK-RGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
+ LC++GK +A R+++K R +Y LI G+CK+G +ELL +M +R
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESA 575
P+ + L++GL + G+P A L++ML + + P +++ ++ GL ++G+ + +
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 576 SLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD 624
L+ + I + T + G D +GL+ G +D
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 183/449 (40%), Gaps = 35/449 (7%)
Query: 248 DDGFRFFQ---KMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVV 304
D RFF K SS+ DP N L+ + +G + AH V+ ++K+ +++
Sbjct: 84 DICVRFFMWVCKHSSYCFDP--TQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEML 141
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGA 364
YC DE VF G + N Y++L+ L ++ + + V
Sbjct: 142 KLM-----YCF----DELREVF------GFRLNYPCYSSLLMSLAKLD-LGFLAYVTYRR 185
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
+E GF T++N C G A K+++ DS + L+ C +
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQD 484
A K++D ++ ++ P +Y + LC+ G+ +A Q+ ++G Q
Sbjct: 246 LRDALKVFD------VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299
Query: 485 PT-SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
T +Y +LI C G + + L M+ R P+ Y LIDGL + G+ A
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSN 603
+KM+K I P+ T+++++ G K G + L+ ++ + + NV + L
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 604 GLRDKGFRIVGLLYDNGYMVDMKE---LIIFLSQSRKLLEANKLL--LFCLEKHHNIDID 658
G K ++ + DNG D+ LI L + + A KLL + C + D
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP--DCL 477
Query: 659 MCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+I CK K A ++ KG
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKG 506
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 31/306 (10%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
N ++ + +E + + + +G+ PSVVT+ +L+ L++ G + + E++
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL-ELM 607
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G P+ Y + I+I G C+ V++ + M P+ VTY +V G GK+
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN----------------------ID 320
A V+ MV++ +LN + Y++LL+G+ + Q I+
Sbjct: 668 DRALETVRAMVERGYELNDRI--YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECIN 725
Query: 321 EALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTL 380
E + V E++ G + L+ LC+ + D+ ++++ LE G F ++ +
Sbjct: 726 ELISVVEQL--GGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEK--AMDII 779
Query: 381 MNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
M +C+ + +++ +++ P ++ ++++ L GD ERA +L ELL
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNG 839
Query: 441 LLRDDG 446
++ G
Sbjct: 840 VVEKSG 845
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 209/412 (50%), Gaps = 19/412 (4%)
Query: 172 RAGLFQESVKLFTSMKSVGVSPSVVTFNSLL--LILLKRGRTNMAKSV-FDEMLSTYGVA 228
R+G + ES+ L +M G +P V+ L+ L+ N+ K+V E+L +G
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR----NIPKAVRVMEILEKFG-Q 155
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
PD + +N LI GFCK + +DD R +M S + PD VTYN ++ +C GK+ A V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
+ ++ S++ P V++YT L+ ++ +DEAL + +EM+ +GLKP+ TYNT+I+G+
Sbjct: 216 LNQLL--SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 349 CEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
C+ +D+ E++ LE+ G PD + N L+ N G E K+ KM K P+
Sbjct: 274 CKEGMVDRAFEMVRN-LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTS 468
TYS+L+ LC G E A L L+++ G TP +Y + C+ G+
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLK-------LMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 469 KAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
A ++ G D +Y ++ CK G + E+ + P+S Y ++
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 528 DGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
L G+ + A + +M+ + I P T++S+++ L ++G E+ L+V
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 204/450 (45%), Gaps = 50/450 (11%)
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
CR+G + ++++ MV+K NPDV+ T L++G+ +NI +A+ V E +++K +P
Sbjct: 100 CRSGNYIESLHLLETMVRKG--YNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQP 156
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
+ YN LI G C++ +ID VL+ + FSPDT T N ++ C+ G L+ ALKV
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLD-RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
+++ QP TY++L+ G + A KL DE+L +G+ P + Y +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL-------KPDMFTYNT 268
Query: 457 MFQFLCKNGKTSKAERGFRQLMKRGTQ--------------------------------- 483
+ + +CK G +A R L +G +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 484 -DP--TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAY 540
DP +Y ILI C++G E LL LM + PD+ Y LI ++G +A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 541 QTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLL 600
+ L+ M+ +P ++++LA L K G A ++ + L E N + L
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 601 FSNGLRDKGFRIVGLLYDNGYMVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
+S+G + + ++ + NG D +I L + + EA +LL+ + +
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
N V+ G CK ++ +A + +V G
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 142/275 (51%), Gaps = 4/275 (1%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N L+R+ G ++E KL T M S P+VVT++ L+ L + G+ A ++ +++
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL-KLM 359
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ PD Y+++ LI FC+ +D F + M S C PDIV YNT++ +C+ GK
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + + + +P+ SY T+ + AL + EM+ G+ P+ +TYN
Sbjct: 420 DQALEIFGKLGEVG--CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
++I LC +D+ E+L + F P T N ++ G C A + +A+ V E M+
Sbjct: 478 SMISCLCREGMVDEAFELLVD-MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLK 437
+P+ TY+VL+ + G A +L ++L++
Sbjct: 537 NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 167/394 (42%), Gaps = 42/394 (10%)
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
C N E+L + E MV KG P+ + LIKG ++ I K V+E + G PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG--QPD 157
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
N L+NG C +++A +V ++M PD+ TY++++ +LC G + A K+ +
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILI 492
+LL D P V Y + + G +A + +++ RG + D +Y +I
Sbjct: 218 QLLS-------DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
G CKEG + +E++ + + +PD Y L+ LL +G+ + + KM
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
P T+ ++ L + G E+ +L+ L+ ++KG
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLM------------------------KEKGLTP 366
Query: 613 VGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKK 672
YD LI + +L A + L + DI NTV+ LCK K
Sbjct: 367 DAYSYD--------PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 673 LSEAFGLYYELVEKGNHQPLSCLENLRVALEAGG 706
+A ++ +L E G S + AL + G
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 6/228 (2%)
Query: 121 NDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESV 180
N +Y +++ L R + A N L +K K + + ++ LI ++ R G ++
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKG---LTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 181 KLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRG 240
+ +M S G P +V +N++L L K G+ + A +F + L G +P++ ++N +
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK-LGEVGCSPNSSSYNTMFSA 447
Query: 241 FCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLN 300
+ +M S DPD +TYN+++ +CR G V A ++ M +S + +
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFH 505
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
P VV+Y +L G+C I++A+ V E MV G +PN TY LI+G+
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A+ + + G T + SY ++ R L+VA FL ++ S+G + + +N
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI--SDGCLP-DIVNYN 407
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+++ + + G +++++F + VG SP+ ++N++ L G A + EM+S
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G+ PD T+N +I C+ MVD+ F M S P +VTYN ++ G C+A +++
Sbjct: 468 -GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
A NV++ MV P+ +YT L+ G EA+ + ++V
Sbjct: 527 AINVLESMVGNG--CRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 213/417 (51%), Gaps = 12/417 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F +LI E+V L M G P++VT+ ++ L KRG T++A ++ ++M
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM- 251
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ D FN +I CK VDD F++M + P++VTY++L+ +C G+
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A ++ M++K +NP++V++ L+ + + EA ++++M+ + + P+ TYN
Sbjct: 312 SDASQLLSDMIEKK--INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+L+ G C ++DK K++ E + F PD T NTL+ G C + + + ++F +M
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ D+ TY+ L++ L H GD + A+K++ +++ DG P + Y + LC
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-------DGVPPDIMTYSILLDGLC 481
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
NGK KA F + K + D Y +I G CK G + G++L + + P+
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
Y ++I GL K AY L+KM + +P + T+++++ L+ G SA L+
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 253/576 (43%), Gaps = 80/576 (13%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
+++ LF M PS+V FN LL + K + ++ S+ ++M + YT+N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTYN 124
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
ILI FC+ S + KM +P IVT ++L++G C ++ A +V MV+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLC------ 349
PD +++TTL+ G + EA+ + + MV +G +PN VTY ++ GLC
Sbjct: 185 G--YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 350 ---------EVQKID--------------KIKEVLEG-----ALEVGGFSPDTCTLNTLM 381
E KI+ K + V + +E G P+ T ++L+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
+ C+ G ++A ++ M+E K+ P+ T++ L+ G F AEKLYD+++K+ I
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI- 361
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGT 500
P + Y S+ C + + KA++ F ++ + D +Y LI G CK
Sbjct: 362 ------DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 501 FEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHS 560
E G EL M R D+ Y +LI GL G+ A + ++M+ + P T+
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 561 ILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNG 620
+L GL G ++ + + + +I+ ++ + T + + G D G+
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD--------- 526
Query: 621 YMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLY 680
+F S S K ++ N + NT+I GLC + L EA+ L
Sbjct: 527 ---------LFCSLSLKGVKPNVVTY--------------NTMISGLCSKRLLQEAYALL 563
Query: 681 YELVEKGNHQPLSCLEN--LRVALEAGGRSKEVEFL 714
++ E G P S N +R L G ++ E +
Sbjct: 564 KKMKEDG-PLPNSGTYNTLIRAHLRDGDKAASAELI 598
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 218/459 (47%), Gaps = 12/459 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N LI + R ++ L M +G PS+VT +SLL R + A ++ D+M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT TF LI G ++ + +M C P++VTY +V+G+C+ G
Sbjct: 183 EM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A N++ M ++ + DVV + T++ C +++D+AL +F+EM KG++PN VTY+
Sbjct: 242 DLALNLLNKM--EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI LC + ++L +E +P+ T N L++ G EA K+++ M++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD TY+ LV C ++A+++++ ++ K P V Y ++ + C
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-------PDVVTYNTLIKGFC 411
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K+ + FR++ RG D +Y LI G +G + ++ M+ PD
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y L+DGL G+ A + M KS I + +++ G+ K G + L L
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNG 620
++ NV + L S L + + ++ + ++G
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 202/397 (50%), Gaps = 13/397 (3%)
Query: 179 SVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILI 238
++ L M++ + VV FN+++ L K + A ++F EM T G+ P+ T++ LI
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLI 302
Query: 239 RGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSED 298
C D + M +P++VT+N L+D + GK A + M+K+S
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS-- 360
Query: 299 LNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
++PD+ +Y +L+ G+CM +D+A +FE MV K P+ VTYNTLIKG C+ ++++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
E+ + G DT T TL+ G + G+ + A KVF++M+ V PD TYS+L+
Sbjct: 421 ELFR-EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
LC+ G E+A +++D + K I L + Y +M + +CK GK F L
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLD-------IYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 479 KRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
+G + + +Y +I G C + + Y LL M P+S Y +LI L+ G+
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592
Query: 538 LAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
+ + +++M V ST ++A +L G +S
Sbjct: 593 ASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKS 628
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 221/448 (49%), Gaps = 19/448 (4%)
Query: 91 TTGFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 150
TT L L S+A+ + + Q G N +Y +++ L + + ++A N L +
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL---NK 250
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
++ + FN++I S + +++ LF M++ G+ P+VVT++SL+ L GR
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
+ A + +M+ + P+ TFN LI F K + + + M + DPDI TYN
Sbjct: 311 WSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
+LV+G C ++ A + + MV S+D PDVV+Y TL++G+C + +++ +F EM
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMV--SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
+GL + VTY TLI+GL D ++V + + G PD T + L++G CN G L
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKL 486
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+AL+VF+ M + +++ D Y+ ++ +C G + L+ L KG+ P
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV-------KPN 539
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLV 509
V Y +M LC +A +++ + G + +Y LI H ++G A EL+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 510 LMLRRNFDPDSE----IYQSLIDGLLQK 533
M F D+ + L DG L K
Sbjct: 600 EMRSCRFVGDASTIGLVANMLHDGRLDK 627
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 213/490 (43%), Gaps = 49/490 (10%)
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV-------------------- 276
++R + +DD F M P IV +N L+ +
Sbjct: 56 ILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 277 ---------------CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDE 321
CR ++ A ++ M+K + P +V+ ++LL GYC + I +
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYE--PSIVTLSSLLNGYCHGKRISD 173
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLM 381
A+ + ++MV+ G +P+ +T+ TLI GL K + +++ ++ G P+ T ++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVV 232
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
NG C G+ + AL + KM K++ D ++ ++ +LC + A L+ E+ KGI
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI- 291
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGT 500
P V Y S+ LC G+ S A + ++ K+ + ++ LI KEG
Sbjct: 292 ------RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 501 FEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHS 560
F +L M++R+ DPD Y SL++G A Q + M+ P T+++
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 561 ILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNG 620
++ G K + L + + + T ++ LF +G D ++ + +G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 621 YMVDMKELIIFLS---QSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAF 677
D+ I L + KL +A ++ + + +DI + T+IEG+CK K+ + +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 678 GLYYELVEKG 687
L+ L KG
Sbjct: 526 DLFCSLSLKG 535
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 172/393 (43%), Gaps = 26/393 (6%)
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID---KIKEVLE 362
Y +LR +D+A+ +F MV P+ V +N L+ + +++K D + E ++
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 363 GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHI 422
V G T N L+N C ++ AL + KMM+ +P T S L+ CH
Sbjct: 113 RLEIVHGLY----TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 423 GDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT 482
A L D++++ G P + ++ L + K S+A ++++RG
Sbjct: 169 KRISDAVALVDQMVEMGY-------RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 483 Q-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQ 541
Q + +Y +++ G CK G + LL M + D I+ ++ID L + A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 542 TLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLF 601
++M I P T+ S+++ L G +++ L+ ++E KI N+ T L
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV----TFNALI 337
Query: 602 SNGLRDKGFRIVGLLYDNGY-------MVDMKELIIFLSQSRKLLEANKLLLFCLEKHHN 654
+++ F LYD+ + L+ +L +A ++ F + K
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 655 IDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
D+ NT+I+G CK K++ + L+ E+ +G
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 196/377 (51%), Gaps = 11/377 (2%)
Query: 193 PSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFR 252
P +V FN+L+ + GR + AK+V +M+++YG+ PD T+N LI G+ K +V
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 253 FFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRG 312
M + C P++ +Y LVDG C+ GK+ A+NV+ M ++ L P+ V + L+
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM--SADGLKPNTVGFNCLISA 468
Query: 313 YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
+C + I EA+ +F EM KG KP+ T+N+LI GLCEV +I +L + G +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA- 527
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
+T T NTL+N G + EA K+ +M+ D TY+ L++ LC G+ ++A L+
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKIL 491
+++L+ DG P + + LC++G +A ++++ RG T D ++ L
Sbjct: 588 EKMLR-------DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
I G C+ G E G + + PD+ + +L+ L + G A L + ++
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 552 VPTTSTFHSILAGLLKK 568
VP T+ +L ++ +
Sbjct: 701 VPNHRTWSILLQSIIPQ 717
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/610 (25%), Positives = 287/610 (47%), Gaps = 32/610 (5%)
Query: 90 KTTGFQVLRLIKVP---SKALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFL 145
K T FQ+ +L+++P S +++ F+W Q G+ H+ Y +++ LG L
Sbjct: 75 KITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLL 134
Query: 146 FSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSV-GVSPSVVTFNSLLLI 204
I+ K G V ++ F S++R Y +AG ++ +L M++V P+ ++N +L I
Sbjct: 135 --IQMKDEGIV-FKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191
Query: 205 LLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
L+ +A +VF +MLS + P +TF ++++ FC + +D + M+ C P
Sbjct: 192 LVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
+ V Y TL+ + + +V A +++ M PD ++ ++ G C I+EA
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG--CVPDAETFNDVILGLCKFDRINEAAK 308
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+ M+ +G P+ +TY L+ GLC++ ++D K++ + P+ NTL++G
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTLIHGF 363
Query: 385 CNAGNLNEALKVFEKMM-EWKVQPDSATYSVLVRNLCHIGDFERA-EKLYDELLKKGILL 442
G L++A V M+ + + PD TY+ L+ G A E L+D +
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD--------M 415
Query: 443 RDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILIIGHCKEGTF 501
R+ G P V +Y + CK GK +A ++ G + T + LI CKE
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 502 EAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSI 561
E+ M R+ PD + SLI GL + E A L+ M+ +V T T++++
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 562 LAGLLKKGYAHESASLV-VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNG 620
+ L++G E+ LV ++ +G +T ++ ++ L G DK + + +G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS-LIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 621 YM---VDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAF 677
+ + LI L +S + EA + + + DI N++I GLC+ ++ +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 678 GLYYELVEKG 687
++ +L +G
Sbjct: 655 TMFRKLQAEG 664
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 195/391 (49%), Gaps = 40/391 (10%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS--------NGT 155
++A K N + GF +D +Y ++ L + ++ A++ + I + +G
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF 363
Query: 156 V---KLEDR------------------FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPS 194
V +L+D +NSLI Y + GL ++++ M++ G P+
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 195 VVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFF 254
V ++ L+ K G+ + A +V +EM S G+ P+T FN LI FCK + + F
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEM-SADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 255 QKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYC 314
++M C PD+ T+N+L+ G+C ++K A +++ M+ SE + + V+Y TL+ +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI--SEGVVANTVTYNTLINAFL 540
Query: 315 MKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDT 374
+ I EA + EMV +G + +TYN+LIKGLC ++DK + + E L G +P
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR-DGHAPSN 599
Query: 375 CTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
+ N L+NG C +G + EA++ ++M+ PD T++ L+ LC G E ++ +
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 435 LLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
L +GI P + ++ +LCK G
Sbjct: 660 LQAEGI-------PPDTVTFNTLMSWLCKGG 683
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 159/314 (50%), Gaps = 7/314 (2%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
AL+ + + G N SY ++++ + ++ A N L S +K FN
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL---NEMSADGLKPNTVGFNC 464
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI ++ + E+V++F M G P V TFNSL+ L + A + +M+S
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE- 523
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
GV +T T+N LI F + + + + +M D +TYN+L+ G+CRAG+V A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ + M++ P +S L+ G C ++EA+ +EMV +G P+ VT+N+LI
Sbjct: 584 RSLFEKMLRDGH--APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
GLC +I+ + L+ G PDT T NTLM+ C G + +A + ++ +E
Sbjct: 642 NGLCRAGRIEDGLTMFR-KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 406 QPDSATYSVLVRNL 419
P+ T+S+L++++
Sbjct: 701 VPNHRTWSILLQSI 714
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 115/194 (59%), Gaps = 3/194 (1%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+LI ++ R G +E+ KL M G +T+NSL+ L + G + A+S+F++ML
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G AP + NILI G C++ MV++ F ++M PDIVT+N+L++G+CRAG++
Sbjct: 592 RD-GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ + + + ++E + PD V++ TL+ C + +A ++ +E ++ G PN T++
Sbjct: 651 EDGLTMFRKL--QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 343 TLIKGLCEVQKIDK 356
L++ + + +D+
Sbjct: 709 ILLQSIIPQETLDR 722
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 219/428 (51%), Gaps = 15/428 (3%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S+AL + + + GF ++ +Y +L L ++ N +A + ++ ++ +K +
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN---IKASVVQY 248
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+ +I S + G F +++ LF M+ G+ VVT++SL+ L G+ + + EM+
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ PD TF+ LI F K + + + +M + PD +TYN+L+DG C+ +
Sbjct: 309 R-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A+ + MV K PD+V+Y+ L+ YC + +D+ + +F E+ KGL PN +TYNT
Sbjct: 368 EANQMFDLMVSKG--CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L+ G C+ K++ KE+ + + G P T L++G C+ G LN+AL++FEKM +
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
++ Y++++ +C+ + A L+ L KG+ P V Y M LCK
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV-------KPDVVTYNVMIGGLCK 537
Query: 464 NGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
G S+A+ FR++ + G T D +Y ILI H + EL+ M F DS
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Query: 523 YQSLIDGL 530
+ +ID L
Sbjct: 598 IKMVIDML 605
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 241/515 (46%), Gaps = 15/515 (2%)
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
+++ LF SM P+ + FN L + + + ++ F + + G+ D YT I
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTI 110
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
+I +C+ + F + +PD +T++TLV+G C G+V A +V MV+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
+ PD+V+ +TL+ G C+K + EALV+ + MV+ G +P+ VTY ++ LC+
Sbjct: 171 Q--RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
++ +E + +++ C G+ ++AL +F +M ++ D TYS L+
Sbjct: 229 ALDLFR-KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
LC+ G ++ K+ E++ + I+ P V + ++ K GK +A+ + +
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNII-------PDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 477 LMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
++ RG D +Y LI G CKE ++ LM+ + +PD Y LI+ +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 536 PLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTH 595
+ +++ ++P T T+++++ G + G + + L ++ + +V
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 596 TVRLLFSNGLRDKGFRIVGLLYDNGYM--VDMKELIIF-LSQSRKLLEANKLLLFCLEKH 652
+ L NG +K I + + + + +II + + K+ +A L +K
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 653 HNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
D+ N +I GLCK LSEA L+ ++ E G
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 199/416 (47%), Gaps = 12/416 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F++L+ + G E+V L M + P +VT ++L+ L +GR + A + D M+
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
YG PD T+ ++ CK+ F+KM N +V Y+ ++D +C+ G
Sbjct: 203 E-YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A ++ M K + DVV+Y++L+ G C D+ + EM+ + + P+ VT++
Sbjct: 262 DDALSLFNEMEMKG--IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI + K+ + KE L + G +PDT T N+L++G C L+EA ++F+ M+
Sbjct: 320 ALIDVFVKEGKLLEAKE-LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+PD TYS+L+ + C + +L+ E+ KG++ P Y ++ C
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-------PNTITYNTLVLGFC 431
Query: 463 KNGKTSKAERGFRQLMKRGTQDPT-SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
++GK + A+ F++++ RG +Y IL+ G C G E+ M +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 491
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
IY +I G+ + A+ + + P T++ ++ GL KKG E+ L
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 224/514 (43%), Gaps = 49/514 (9%)
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
V+D F+ M P + +N L V R + KGM + + D+ +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM--ELNGIEHDMYTM 108
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
T ++ YC K+ + A V G +P+ +T++TL+ G C ++ + +++ +E
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
+ PD T++TL+NG C G ++EAL + ++M+E+ QPD TY ++ LC G+
Sbjct: 169 MKQ-RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DP 485
A L+ ++ ++ I V Y + LCK+G A F ++ +G + D
Sbjct: 228 LALDLFRKMEERNI-------KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 486 TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
+Y LI G C +G ++ G ++L M+ RN PD + +LID +++G+ L A + +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGL 605
M+ I P T T++S++ G K+ HE+ + L++ ++ + +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 606 RDKGFRIVGLLYDNGYM---VDMKELIIFLSQSRKLLEANKLL----------------- 645
D G R+ + G + + L++ QS KL A +L
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 646 --------------LFCLEKHH----NIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
L EK + I + N +I G+C K+ +A+ L+ L +KG
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 688 NHQPLSCLENLRVALEAGGRSKEVEFLSKRMPNE 721
+ + L G E + L ++M +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+L+ + ++G + +LF M S GV PSVVT+ LL L G N A +F++M
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 223 S---TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
T G+ +NI+I G C S VDD + F +S PD+VTYN ++ G+C+
Sbjct: 483 KSRMTLGIG----IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
G + A + + M K + PD +Y L+R + + ++ + EEM G ++
Sbjct: 539 GSLSEADMLFRKM--KEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596
Query: 340 TYNTLIKGLCEVQKIDK 356
T +I L + +++DK
Sbjct: 597 TIKMVIDMLSD-RRLDK 612
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/528 (26%), Positives = 248/528 (46%), Gaps = 71/528 (13%)
Query: 103 PSKALKFFNWLPQMG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
P L++++WL + + + + F +L L A+ + R+FL R NG+
Sbjct: 81 PDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVR--NGSDHQVHS 138
Query: 162 FFNS----------------LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLIL 205
F++ L+ +Y F+ + F G S ++ L++ L
Sbjct: 139 IFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIAL 198
Query: 206 LKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPD 265
LK R+ + V+ EM+ + P+ +TFN++I CK ++ + M + C P+
Sbjct: 199 LKENRSADVEYVYKEMIRR-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPN 257
Query: 266 IVTYNTLVDGVCR---AGKVKTAHNVVKGMVKKS-------------------------- 296
+V+YNTL+DG C+ GK+ A V+K MV+
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 297 -------EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLC 349
+D+ P+V+SY +L+ G C I EA+ + ++MV G++PN +TYN LI G C
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 350 EVQKIDKIKEVLE--GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQP 407
K D +KE L+ G+++ G P T N L++ +C G +++ + E+M + P
Sbjct: 378 ---KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 408 DSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKT 467
D TY+ L+ LC G+ E A+KL+D+L KG+ P + + + + C+ G++
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL--------PDLVTFHILMEGYCRKGES 486
Query: 468 SKAERGFRQLMKRGTQD-PTSYKILIIGHCKEGTFEAGYELLVLMLR-RNFDPDSEIYQS 525
KA +++ K G + +Y I++ G+CKEG +A + M + R + Y
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546
Query: 526 LIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHE 573
L+ G QKG+ A L +ML+ +VP T+ + ++ +G+ +
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 140/304 (46%), Gaps = 25/304 (8%)
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
V+++M+ K+QP+ T++V++ LC G +A + +++ + G +P V +Y
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM-------KVYGCSPNVVSYN 262
Query: 456 SMFQFLCK---NGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLM 511
++ CK NGK KA+ +++++ + + T++ ILI G K+ ++ M
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
L ++ P+ Y SLI+GL G+ A KM+ + + P T+++++ G K
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 572 HESASLVVLLLEGKIR-QNVTLSTHTVRLLFSN----GLRDKGFRIVGLLYDNGYMVDMK 626
E+ + G ++ Q +T +L G D GF + + G + D+
Sbjct: 383 KEALDMF-----GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437
Query: 627 E---LIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYEL 683
LI L ++ +EA K L L D+ + ++EG C+ + +A L E+
Sbjct: 438 TYNCLIAGLCRNGN-IEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Query: 684 VEKG 687
+ G
Sbjct: 497 SKMG 500
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 217/444 (48%), Gaps = 17/444 (3%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
G+T + SY ++ R L+ + +KRK +K + S+I R
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG---LKPNSYIYGSIIGLLCRICKL 775
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
E+ + F+ M G+ P V + +L+ KRG A F EM S + PD T+
Sbjct: 776 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTA 834
Query: 237 LIRGFCK-NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
+I GFC+ MV+ G + F +M +PD VT+ L++G C+AG +K A V M++
Sbjct: 835 IISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
+P+VV+YTTL+ G C + ++D A + EM GL+PN TYN+++ GLC+ I+
Sbjct: 894 G--CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+ +++ G E G + DT T TLM+ +C +G +++A ++ ++M+ +QP T++VL
Sbjct: 952 EAVKLV-GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 1010
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ C G E EKL + +L KGI P + S+ + C A ++
Sbjct: 1011 MNGFCLHGMLEDGEKLLNWMLAKGI-------APNATTFNSLVKQYCIRNNLKAATAIYK 1063
Query: 476 QLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
+ RG D +Y+ L+ GHCK + + L M + F Y LI G L++
Sbjct: 1064 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTF 558
+ L A + +M + + F
Sbjct: 1124 KFLEAREVFDQMRREGLAADKEIF 1147
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 215/449 (47%), Gaps = 15/449 (3%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
K K + + G N Y ++ +L R L A + R+ + + +
Sbjct: 742 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG---ILPDTVVYT 798
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+LI + + G + + K F M S ++P V+T+ +++ + G A +F EM
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 858
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G+ PD+ TF LI G+CK + D FR M C P++VTY TL+DG+C+ G + +
Sbjct: 859 -GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A+ ++ M K L P++ +Y +++ G C NI+EA+ + E GL + VTY TL
Sbjct: 918 ANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ C+ ++DK +E+L+ L G P T N LMNG C G L + K+ M+
Sbjct: 976 MDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
+ P++ T++ LV+ C + + A +Y ++ +G+ DG T Y+++ + CK
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV--GPDGKT-----YENLVKGHCKA 1087
Query: 465 GKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
+A F+++ +G + ++Y +LI G K F E+ M R D EI+
Sbjct: 1088 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
D + P + +++++ +V
Sbjct: 1148 DFFSDTKYKGKRPDTIVDPIDEIIENYLV 1176
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 157/630 (24%), Positives = 279/630 (44%), Gaps = 85/630 (13%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL--FSIKRKSNGTVKLEDRFF 163
L FF+W + N +S +++ + +++L VA++ + F + K N T +FF
Sbjct: 547 VLDFFDW-ARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFV-QFF 604
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+ L+ +Y K G P V F+ +L+ G A+ VF++ML+
Sbjct: 605 DLLVYTY----------------KDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLN 646
Query: 224 TYGVAPDTYTFNILIRGFCKNSM-VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
YG+ + N+ + K+ F++ ++ +YN ++ VC+ G++
Sbjct: 647 -YGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 705
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K AH+++ ++ + + PDV+SY+T++ GYC +D+ + E M KGLKPN+ Y
Sbjct: 706 KEAHHLL--LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 763
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
++I LC + K+ + +E + G PDT TL++G C G++ A K F +M
Sbjct: 764 SIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 822
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI------------------LLRD 444
+ PD TY+ ++ C IGD A KL+ E+ KG+ ++D
Sbjct: 823 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 882
Query: 445 D----------GSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILII 493
G +P V Y ++ LCK G A ++ K G Q +Y ++
Sbjct: 883 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 942
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
G CK G E +L+ + D+ Y +L+D + GE A + L++ML + P
Sbjct: 943 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002
Query: 554 TTSTFHSILAG----------------LLKKGYAHESASLVVLLLEGKIRQNVTLSTHTV 597
T TF+ ++ G +L KG A + + L+ + IR N+ +T
Sbjct: 1003 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 1062
Query: 598 RLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
+ + S G+ G L+ + +MKE FL Q K K ++ +
Sbjct: 1063 KDMCSRGVGPDGKTYENLVKGHCKARNMKE-AWFLFQEMK------------GKGFSVSV 1109
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ +I+G K KK EA ++ ++ +G
Sbjct: 1110 STYSVLIKGFLKRKKFLEAREVFDQMRREG 1139
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 217/444 (48%), Gaps = 17/444 (3%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
G+T + SY ++ R L+ + +KRK +K + S+I R
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG---LKPNSYIYGSIIGLLCRICKL 775
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
E+ + F+ M G+ P V + +L+ KRG A F EM S + PD T+
Sbjct: 776 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTA 834
Query: 237 LIRGFCK-NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
+I GFC+ MV+ G + F +M +PD VT+ L++G C+AG +K A V M++
Sbjct: 835 IISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
+P+VV+YTTL+ G C + ++D A + EM GL+PN TYN+++ GLC+ I+
Sbjct: 894 G--CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+ +++ G E G + DT T TLM+ +C +G +++A ++ ++M+ +QP T++VL
Sbjct: 952 EAVKLV-GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 1010
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ C G E EKL + +L KGI P + S+ + C A ++
Sbjct: 1011 MNGFCLHGMLEDGEKLLNWMLAKGI-------APNATTFNSLVKQYCIRNNLKAATAIYK 1063
Query: 476 QLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
+ RG D +Y+ L+ GHCK + + L M + F Y LI G L++
Sbjct: 1064 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTF 558
+ L A + +M + + F
Sbjct: 1124 KFLEAREVFDQMRREGLAADKEIF 1147
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 215/449 (47%), Gaps = 15/449 (3%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
K K + + G N Y ++ +L R L A + R+ + + +
Sbjct: 742 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG---ILPDTVVYT 798
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+LI + + G + + K F M S ++P V+T+ +++ + G A +F EM
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 858
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G+ PD+ TF LI G+CK + D FR M C P++VTY TL+DG+C+ G + +
Sbjct: 859 -GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A+ ++ M K L P++ +Y +++ G C NI+EA+ + E GL + VTY TL
Sbjct: 918 ANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ C+ ++DK +E+L+ L G P T N LMNG C G L + K+ M+
Sbjct: 976 MDAYCKSGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
+ P++ T++ LV+ C + + A +Y ++ +G+ DG T Y+++ + CK
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV--GPDGKT-----YENLVKGHCKA 1087
Query: 465 GKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
+A F+++ +G + ++Y +LI G K F E+ M R D EI+
Sbjct: 1088 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
D + P + +++++ +V
Sbjct: 1148 DFFSDTKYKGKRPDTIVDPIDEIIENYLV 1176
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 157/630 (24%), Positives = 279/630 (44%), Gaps = 85/630 (13%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL--FSIKRKSNGTVKLEDRFF 163
L FF+W + N +S +++ + +++L VA++ + F + K N T +FF
Sbjct: 547 VLDFFDW-ARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFV-QFF 604
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+ L+ +Y K G P V F+ +L+ G A+ VF++ML+
Sbjct: 605 DLLVYTY----------------KDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLN 646
Query: 224 TYGVAPDTYTFNILIRGFCKNSM-VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
YG+ + N+ + K+ F++ ++ +YN ++ VC+ G++
Sbjct: 647 -YGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 705
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K AH+++ ++ + + PDV+SY+T++ GYC +D+ + E M KGLKPN+ Y
Sbjct: 706 KEAHHLL--LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 763
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
++I LC + K+ + +E + G PDT TL++G C G++ A K F +M
Sbjct: 764 SIIGLLCRICKLAEAEEAFSEMIR-QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 822
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI------------------LLRD 444
+ PD TY+ ++ C IGD A KL+ E+ KG+ ++D
Sbjct: 823 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 882
Query: 445 D----------GSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILII 493
G +P V Y ++ LCK G A ++ K G Q +Y ++
Sbjct: 883 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 942
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
G CK G E +L+ + D+ Y +L+D + GE A + L++ML + P
Sbjct: 943 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002
Query: 554 TTSTFHSILAG----------------LLKKGYAHESASLVVLLLEGKIRQNVTLSTHTV 597
T TF+ ++ G +L KG A + + L+ + IR N+ +T
Sbjct: 1003 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 1062
Query: 598 RLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
+ + S G+ G L+ + +MKE FL Q K K ++ +
Sbjct: 1063 KDMCSRGVGPDGKTYENLVKGHCKARNMKE-AWFLFQEMK------------GKGFSVSV 1109
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ +I+G K KK EA ++ ++ +G
Sbjct: 1110 STYSVLIKGFLKRKKFLEAREVFDQMRREG 1139
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 258/546 (47%), Gaps = 44/546 (8%)
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
++V LF M PS+V FN LL + K + + S+ ++M T G++ D YT++I
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSI 123
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
I FC+ S + KM +PDIVT ++L++G C + ++ A +V MV+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
PD ++TTL+ G + EA+ + ++MV +G +P+ VTY T++ GLC+ ID
Sbjct: 184 --YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
+L+ +E G D NT+++G C ++++AL +F +M ++PD TYS L+
Sbjct: 242 ALSLLK-KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
LC+ G + A +L +++++ I P V + ++ K GK +AE+ + +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKI-------NPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 477 LMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
++KR D +Y LI G C + + LM+ ++ P+ Y +LI G +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 536 PLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTH 595
+ ++M + +V T T+ +++ G + ++A +V +Q V++ H
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFF-QARDCDNAQMV-------FKQMVSVGVH 465
Query: 596 TVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNI 655
+L N L D L NG + K +++F R +E
Sbjct: 466 P-NILTYNILLDG-------LCKNGKLA--KAMVVFEYLQRSTMEP-------------- 501
Query: 656 DIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLS 715
DI N +IEG+CK K+ + + L+ L KG + + G +E + L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 716 KRMPNE 721
K+M +
Sbjct: 562 KKMKED 567
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 222/480 (46%), Gaps = 68/480 (14%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++ I + R ++ + M +G P +VT +SLL R + A ++ D+M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT+TF LI G ++ + +M C PD+VTY T+V+G+C+ G +
Sbjct: 181 EM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +++K M K + DVV Y T++ G C +++D+AL +F EM +KG++P+ TY+
Sbjct: 240 DLALSLLKKMEKGK--IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 343 TLIKGLCEVQKIDKIKEVLEGALE------VGGFS------------------------- 371
+LI LC + +L +E V FS
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 372 ---PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
PD T ++L+NG C L+EA +FE M+ P+ TYS L++ C E
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 429 EKLYDELLKKGIL---------------LRDD-------------GSTPLVAAYKSMFQF 460
+L+ E+ ++G++ RD G P + Y +
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
LCKNGK +KA F + ++R T +P +Y I+I G CK G E G+EL + + P
Sbjct: 478 LCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
+ Y ++I G +KG A L+KM + +P + T+++++ L+ G SA L+
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 223/431 (51%), Gaps = 15/431 (3%)
Query: 91 TTGFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 150
TT L L S+A+ + + Q G + +Y ++ L + ++++A + L K+
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL---KK 248
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
G ++ + +N++I + +++ LFT M + G+ P V T++SL+ L GR
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
+ A + +M+ + P+ TF+ LI F K + + + + +M + DPDI TY+
Sbjct: 309 WSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
+L++G C ++ A ++ + M+ S+D P+VV+Y+TL++G+C + ++E + +F EM
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMI--SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
+GL N VTY TLI G + + D + V + + V G P+ T N L++G C G L
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKL 484
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+A+ VFE + ++PD TY++++ +C G E +L+ L KG+ +P
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV-------SPN 537
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLV 509
V AY +M C+ G +A+ +++ + G + +Y LI ++G EA EL+
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 510 LMLRRNFDPDS 520
M F D+
Sbjct: 598 EMRSCGFAGDA 608
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 202/408 (49%), Gaps = 12/408 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN L+ + + F+ + L M+++G+S + T++ + +R + ++A +V +M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PD T + L+ G+C + + D +M PD T+ TL+ G+ K
Sbjct: 146 K-LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +V MV++ PD+V+Y T++ G C + +ID AL + ++M ++ + V YN
Sbjct: 205 SEAVALVDQMVQRG--CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
T+I GLC+ + +D + ++ G PD T ++L++ CN G ++A ++ M+E
Sbjct: 263 TIIDGLCKYKHMDDALNLFT-EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
K+ P+ T+S L+ G AEKLYDE++K+ I P + Y S+ C
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI-------DPDIFTYSSLINGFC 374
Query: 463 KNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ + +A+ F ++ + + +Y LI G CK E G EL M +R ++
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
Y +LI G Q + A ++M+ + P T++ +L GL K G
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 256/545 (46%), Gaps = 48/545 (8%)
Query: 139 NVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTF 198
N +N +FS + S+ + E + ++R+ +++ LF M PS++ F
Sbjct: 628 NACKNIIFSEEICSSESCG-ESYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEF 686
Query: 199 NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS 258
+ LL + K + ++ S F E + G++ + YT+NILI FC+ S + KM
Sbjct: 687 SKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 745
Query: 259 SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN 318
+PDIVT N+L++G C ++ A +V MV+ PD V++TTL+ G +
Sbjct: 746 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG--YKPDTVTFTTLIHGLFLHNK 803
Query: 319 IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
EA+ + + MV +G +P+ VTY ++ GLC+ D +L +E + +
Sbjct: 804 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN-KMEAAKIEANVVIYS 862
Query: 379 TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
T+++ C + ++AL +F +M V+P+ TYS L+ LC+ G + A +L +++++
Sbjct: 863 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 922
Query: 439 GILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHC 496
I P + + ++ K GK KAE+ + +++KR DP +Y LI G C
Sbjct: 923 KI-------NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI-DPNIFTYSSLINGFC 974
Query: 497 KEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTS 556
++L LM+R++ P+ Y +LI+G + + ++M + +V T
Sbjct: 975 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 1034
Query: 557 TFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLL 616
T+ +++ G + ++A +V +Q V++ H +L N L D L
Sbjct: 1035 TYTTLIHGFF-QARDCDNAQMV-------FKQMVSVGVHP-NILTYNILLDG-------L 1078
Query: 617 YDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEA 676
NG + K +++F R +E DI N +IEG+CK K
Sbjct: 1079 CKNGKLA--KAMVVFEYLQRSTMEP--------------DIYTYNIMIEGMCKAGKWKMG 1122
Query: 677 FGLYY 681
G+Y+
Sbjct: 1123 -GIYF 1126
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 198/396 (50%), Gaps = 12/396 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ +++ + G ++ L M+ + VV +N+++ L K + A ++F EM
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM- 284
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ PD +T++ LI C D R M +P++VT++ L+D + GK+
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M+K+S ++PD+ +Y++L+ G+CM +DEA +FE M+ K PN VTY+
Sbjct: 345 VEAEKLYDEMIKRS--IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TLIKG C+ +++++ E+ + G +T T TL++G A + + A VF++M+
Sbjct: 403 TLIKGFCKAKRVEEGMELFR-EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V P+ TY++L+ LC G +A +++ L + + P + Y M + +C
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM-------EPDIYTYNIMIEGMC 514
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K GK F L +G + + +Y +I G C++G+ E LL M P+S
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
Y +LI L+ G+ + + +++M ST
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 132/587 (22%), Positives = 257/587 (43%), Gaps = 23/587 (3%)
Query: 110 FNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL-FSIKRKSNGTVKLEDRFFNSLIR 168
F + +G N +Y ++L+ G +N +A+ + F ++S T++ + +N +I
Sbjct: 456 FKQMVSVGVHPNILTYNILLD--GLCKNGKLAKAMVVFEYLQRS--TMEPDIYTYNIMIE 511
Query: 169 SYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVA 228
+AG ++ +LF ++ GVSP+V+ +N+++ ++G A S+ +M G
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED-GPL 570
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
P++ T+N LIR ++ + ++M S D T L R + N
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LSSKFKREIEKPNRENA 629
Query: 289 VKGMVKKSEDLNPDVVS----YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
K ++ E + + Y +LR +D+A+ +F M P+ + ++ L
Sbjct: 630 CKNIIFSEEICSSESCGESYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKL 689
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ + ++ K D + E +E+ G S + T N L+N C L+ AL + KMM+
Sbjct: 690 LSAIAKMNKFDLVISFGE-KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 748
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
+PD T + L+ CH A L D++++ G P + ++ L +
Sbjct: 749 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY-------KPDTVTFTTLIHGLFLH 801
Query: 465 GKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
K S+A ++++RG Q D +Y ++ G CK G + LL M + + IY
Sbjct: 802 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 861
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
++ID L + A +M + P T+ S+++ L G +++ L+ ++E
Sbjct: 862 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 921
Query: 584 GKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLLE 640
KI N+ + + G K ++ + + LI +L E
Sbjct: 922 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 981
Query: 641 ANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
A ++L + K ++ NT+I G CK K++ + L+ E+ ++G
Sbjct: 982 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 1028
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 167/373 (44%), Gaps = 12/373 (3%)
Query: 319 IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
+D+A+ +F +MV P+ V +N L+ + ++ K + + + E ++ G S D T +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE-QMQTLGISHDLYTYS 122
Query: 379 TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
+N C L+ AL V KMM+ +PD T S L+ CH A L D++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 439 GILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCK 497
G P + ++ L + K S+A Q+++RG Q D +Y ++ G CK
Sbjct: 183 GY-------KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 498 EGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
G + LL M + + D IY ++IDGL + A +M I P T
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLY 617
+ S+++ L G +++ L+ ++E KI NV + + G + ++ +
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 618 DNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLS 674
D+ LI +L EA + + K ++ +T+I+G CK K++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 675 EAFGLYYELVEKG 687
E L+ E+ ++G
Sbjct: 416 EGMELFREMSQRG 428
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 115/289 (39%), Gaps = 51/289 (17%)
Query: 418 NLCHIGDFER----AEKLYDELLK---KGILLRDDGST-----------PLVAAYKSMFQ 459
NLC G +ER A Y E+L+ I+ DD P + + +
Sbjct: 32 NLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLS 91
Query: 460 FLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
+ K K Q+ G + D +Y I I C+ +L M++ ++P
Sbjct: 92 AVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP 151
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
D SL++G A + +M++ P T TF +++ GL A E+ +LV
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 579 VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKL 638
+++ + ++ V NGL +G ++ + LS +K+
Sbjct: 212 DQMVQRGCQPDLVTYGTVV-----NGLCKRG-----------------DIDLALSLLKKM 249
Query: 639 LEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
E K+ D+ + NT+I+GLCK K + +A L+ E+ KG
Sbjct: 250 -EKGKI---------EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 224/435 (51%), Gaps = 19/435 (4%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S+A+ + + G + +Y +++ L + ++++A + L K+ G ++ +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL---KKMEQGKIEPGVVIY 259
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N++I + +++ LFT M + G+ P+VVT+NSL+ L GR + A + +M+
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ P+ TF+ LI F K + + + + +M + DPDI TY++L++G C ++
Sbjct: 320 R-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A ++ + M+ S+D P+VV+Y TL++G+C + +DE + +F EM +GL N VTY T
Sbjct: 379 EAKHMFELMI--SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
LI G + ++ D + V + + G PD T + L++G CN G + AL VFE +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVS-DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
K++PD TY++++ +C G E L+ L KG+ P V Y +M C+
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV-------KPNVVTYTTMMSGFCR 548
Query: 464 NGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE- 521
G +A+ FR++ + G D +Y LI H ++G A EL+ M F D+
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Query: 522 ---IYQSLIDGLLQK 533
+ L DG L K
Sbjct: 609 IGLVTNMLHDGRLDK 623
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 216/448 (48%), Gaps = 12/448 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++ LI + R ++ + M +G P +VT NSLL R + A S+ +M+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PD++TFN LI G +++ + +M C PD+VTY +V+G+C+ G +
Sbjct: 179 EM-GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +++K M + + P VV Y T++ C +N+++AL +F EM +KG++PN VTYN
Sbjct: 238 DLALSLLKKM--EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI+ LC + +L +E +P+ T + L++ G L EA K++++M++
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD TYS L+ C + A+ +++ ++ K P V Y ++ + C
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-------PNVVTYNTLIKGFC 407
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K + + FR++ +RG + +Y LI G + + + M+ PD
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y L+DGL G+ A + + +S + P T++ ++ G+ K G + L L
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKG 609
++ NV T + GL+++
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/547 (25%), Positives = 250/547 (45%), Gaps = 44/547 (8%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
++V LF M PS+V F+ LL + K + ++ S+ ++M G++ + YT++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYS 120
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
ILI FC+ S + KM +PDIVT N+L++G C ++ A ++V MV+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
PD ++ TL+ G EA+ + + MV KG +P+ VTY ++ GLC+ ID
Sbjct: 181 G--YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+L+ +E G P NT+++ CN N+N+AL +F +M ++P+ TY+ L
Sbjct: 239 LALSLLK-KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+R LC+ G + A +L +++++ I P V + ++ K GK +AE+ +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKI-------NPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 476 QLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
+++KR D +Y LI G C + + LM+ ++ P+ Y +LI G +
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
+ ++M + +V T T+ +++ G + A E + ++ + + V
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ---ARECDNAQIVFKQ-MVSDGVLPDI 466
Query: 595 HTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHN 654
T +L L +NG + L++F R +E
Sbjct: 467 MTYSILLDG------------LCNNGKV--ETALVVFEYLQRSKMEP------------- 499
Query: 655 IDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFL 714
DI N +IEG+CK K+ + + L+ L KG + + G +E + L
Sbjct: 500 -DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 715 SKRMPNE 721
+ M E
Sbjct: 559 FREMKEE 565
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 198/397 (49%), Gaps = 13/397 (3%)
Query: 179 SVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILI 238
++ L M+ + P VV +N+++ L N A ++F EM G+ P+ T+N LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLI 298
Query: 239 RGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSED 298
R C D R M +P++VT++ L+D + GK+ A + M+K+S
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-- 356
Query: 299 LNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
++PD+ +Y++L+ G+CM +DEA +FE M+ K PN VTYNTLIKG C+ +++D+
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
E+ + G +T T TL++G A + A VF++M+ V PD TYS+L+
Sbjct: 417 ELFR-EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
LC+ G E A +++ L + + P + Y M + +CK GK F L
Sbjct: 476 LCNNGKVETALVVFEYLQRSKM-------EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 479 KRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
+G + + +Y ++ G C++G E L M PDS Y +LI L+ G+
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKA 588
Query: 538 LAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
+ + +++M V ST ++ +L G +S
Sbjct: 589 ASAELIREMRSCRFVGDASTI-GLVTNMLHDGRLDKS 624
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 195/391 (49%), Gaps = 12/391 (3%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N L+ + R ++ M +G PS+VTF SLL + R A +FD+M+
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G P+ +N +I G CK+ VD+ +M PD+VTYN+L+ G+C +G+
Sbjct: 180 M-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A +V M K+ ++ PDV ++ L+ + + EA +EEM+ + L P+ VTY+
Sbjct: 239 DATRMVSCMTKR--EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
LI GLC ++D+ +E+ + G F PD T + L+NG+C + + +K+F +M +
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
V ++ TY++L++ C G AE+++ ++ G+ P + Y + LC
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV-------HPNIITYNVLLHGLCD 408
Query: 464 NGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
NGK KA + K G D +Y I+I G CK G +++ + + PD
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
Y +++ GL +KG A +KM + I+P
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 204/428 (47%), Gaps = 12/428 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F+ L+ + + + + L+ M+ +G+ ++ T N LL + + ++A S +M+
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G P TF L+ GFC+ V D F +M P++V YNT++DG+C++ +V
Sbjct: 144 KL-GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +++ M K + + PDVV+Y +L+ G C +A + M + + P+ T+N
Sbjct: 203 DNALDLLNRMEK--DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI + ++ + +E E + PD T + L+ G C L+EA ++F M+
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIR-RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
PD TYS+L+ C E KL+ E+ ++G++ T L+ Y C
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY-------C 372
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ GK + AE FR+++ G + +Y +L+ G C G E +L M + D D
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y +I G+ + GE A+ + ++P T+ +++ GL KKG E+ +L +
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 582 LEGKIRQN 589
E I N
Sbjct: 493 KEDGILPN 500
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 193/398 (48%), Gaps = 11/398 (2%)
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
P F+ L+ K D +++M ++ T N L++ CR ++ A +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
+ M+K + P +V++ +LL G+C + +AL +F++MV G KPN V YNT+I GL
Sbjct: 139 LGKMIKLGHE--PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 349 CEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
C+ +++D ++L +E G PD T N+L++G C++G ++A ++ M + ++ PD
Sbjct: 197 CKSKQVDNALDLLN-RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTS 468
T++ L+ G AE+ Y+E++++ + P + Y + LC +
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-------DPDIVTYSLLIYGLCMYSRLD 308
Query: 469 KAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
+AE F ++ +G D +Y ILI G+CK E G +L M +R ++ Y LI
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 528 DGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIR 587
G + G+ +A + ++M+ + P T++ +L GL G ++ ++ + + +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 588 QNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM 625
++ +R + G + I L G M D+
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 165/390 (42%), Gaps = 51/390 (13%)
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
Y +LR +D++L +F MV P+ ++ L+ + +++K D + + E +
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWE-QM 107
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
++ G + CT N L+N C L+ AL KM++ +P T+ L+ C
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC----- 162
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QD 484
R +++YD L ++ G P V Y ++ LCK+ + A ++ K G D
Sbjct: 163 -RGDRVYDALYMFDQMV-GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 485 PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
+Y LI G C G + ++ M +R PD + +LID +++G A + +
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 545 KMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNG 604
+M++ S+ P T+ ++ GL E+ + ++ +V T+++ +
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV--TYSILI----- 333
Query: 605 LRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTV- 663
NGY +S+K+ KL FC + + NTV
Sbjct: 334 --------------NGY-----------CKSKKVEHGMKL--FCEMSQRGV---VRNTVT 363
Query: 664 ----IEGLCKMKKLSEAFGLYYELVEKGNH 689
I+G C+ KL+ A ++ +V G H
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 213/417 (51%), Gaps = 12/417 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN+LI E+V L M + G P + T+ +++ L KRG ++A S+ +M
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM- 246
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ D + +I C V+D F +M + P++VTYN+L+ +C G+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A ++ M+++ +NP+VV+++ L+ + + + EA +++EM+ + + P+ TY+
Sbjct: 307 SDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI G C ++D+ K + E + F P+ T NTL+ G C A + E +++F +M +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ ++ TY+ L++ L GD + A+K++ +++ DG P + Y + LC
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-------DGVPPDIITYSILLDGLC 476
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K GK KA F L K + D +Y I+I G CK G E G++L + + P+
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
IY ++I G +KG A ++M + +P + T+++++ L+ G SA L+
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 227/435 (52%), Gaps = 19/435 (4%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S+A+ + + G + +Y ++ L + ++++A + L K+ G ++ + +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL---KKMEKGKIEADVVIY 258
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
++I + +++ LFT M + G+ P+VVT+NSL+ L GR + A + +M+
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ P+ TF+ LI F K + + + + +M + DPDI TY++L++G C ++
Sbjct: 319 R-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A ++ + M+ S+D P+VV+Y TL++G+C + ++E + +F EM +GL N VTYNT
Sbjct: 378 EAKHMFELMI--SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
LI+GL + D +++ + + G PD T + L++G C G L +AL VFE + +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
K++PD TY++++ +C G E L+ L KG+ P V Y +M C+
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV-------KPNVIIYTTMISGFCR 547
Query: 464 NGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
G +A+ FR++ + GT + +Y LI ++G A EL+ M F D+
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 523 YQSLI----DGLLQK 533
+I DG L+K
Sbjct: 608 ISMVINMLHDGRLEK 622
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 219/448 (48%), Gaps = 12/448 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N LI + R ++ + M +G P +VT +SLL R + A ++ D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
P+T TFN LI G ++ + +M + C PD+ TY T+V+G+C+ G +
Sbjct: 178 -VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +++K M K + DVV YTT++ C +N+++AL +F EM +KG++PN VTYN
Sbjct: 237 DLALSLLKKMEKGK--IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI+ LC + +L +E +P+ T + L++ G L EA K++++M++
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD TYS L+ C + A+ +++ ++ K P V Y ++ + C
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-------PNVVTYNTLIKGFC 406
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K + + FR++ +RG + +Y LI G + G + ++ M+ PD
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y L+DGL + G+ A + + KS + P T++ ++ G+ K G + L L
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKG 609
++ NV + T + GL+++
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 204/413 (49%), Gaps = 16/413 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ +++ + G ++ L M+ + VV + +++ L N A ++F EM
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM- 281
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ P+ T+N LIR C D R M +P++VT++ L+D + GK+
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M+K+S ++PD+ +Y++L+ G+CM +DEA +FE M+ K PN VTYN
Sbjct: 342 VEAEKLYDEMIKRS--IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TLIKG C+ +++++ E+ + G +T T NTL+ G AG+ + A K+F+KM+
Sbjct: 400 TLIKGFCKAKRVEEGMELFR-EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V PD TYS+L+ LC G E+A +++ L K + P + Y M + +C
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM-------EPDIYTYNIMIEGMC 511
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K GK F L +G + + Y +I G C++G E L M P+S
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL----AGLLKKGY 570
Y +LI L+ G+ + + +++M V ST ++ G L+K Y
Sbjct: 572 TYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/577 (25%), Positives = 253/577 (43%), Gaps = 82/577 (14%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
++V LF M PS+V FN LL + K + ++ S+ E + ++ D Y++N
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISL-GERMQNLRISYDLYSYN 119
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
ILI FC+ S + KM +PDIVT ++L++G C ++ A +V M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF-- 177
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
+ P+ V++ TL+ G + EA+ + + MV +G +P+ TY T++ GLC+ ID
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+L+ +E G D T+++ CN N+N+AL +F +M ++P+ TY+ L
Sbjct: 238 LALSLLK-KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 416 VRNLCHIGDF-----------ER------------------------AEKLYDELLKKGI 440
+R LC+ G + ER AEKLYDE++K+ I
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 441 LLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEG 499
P + Y S+ C + + +A+ F ++ + + +Y LI G CK
Sbjct: 357 -------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 500 TFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFH 559
E G EL M +R ++ Y +LI GL Q G+ +A + +KM+ + P T+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 560 SILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDN 619
+L GL K G ++ + L + K+ ++ + + G + G+
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD-------- 521
Query: 620 GYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGL 679
+F S S K ++ N ++ T+I G C+ EA L
Sbjct: 522 ----------LFCSLSLKGVKPNVIIY--------------TTMISGFCRKGLKEEADAL 557
Query: 680 YYELVEKGNHQPLSCLEN--LRVALEAGGRSKEVEFL 714
+ E+ E G P S N +R L G ++ E +
Sbjct: 558 FREMKEDGT-LPNSGTYNTLIRARLRDGDKAASAELI 593
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 163/383 (42%), Gaps = 12/383 (3%)
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
L R + +D+A+ +F EMV P+ V +N L+ + ++ K D + + E ++
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGE-RMQNL 109
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
S D + N L+N C L AL V KMM+ +PD T S L+ CH A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTS 487
L D++ P + ++ L + K S+A +++ RG Q D +
Sbjct: 170 VALVDQMFVMEY-------QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT 222
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
Y ++ G CK G + LL M + + D IY ++ID L A +M
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 548 KSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRD 607
I P T++S++ L G +++ L+ ++E KI NV + + G
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 608 KGFRIVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVI 664
+ ++ + D+ LI +L EA + + K ++ NT+I
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 665 EGLCKMKKLSEAFGLYYELVEKG 687
+G CK K++ E L+ E+ ++G
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRG 425
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 241/572 (42%), Gaps = 79/572 (13%)
Query: 106 ALKFFNWLPQMG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
AL FF + F H ++ +M+ L ++ + L +K + + F
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG---FHCSEDLFI 115
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
S+I Y + GL + +V++F +K G PSV +N +L LL R M V+ +M
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P+ +T+N+L++ CKN+ VD + +MS+ C PD V+Y T++ +C G VK
Sbjct: 176 -GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ +E P V Y L+ G C + + A + EMV+KG+ PN ++Y+TL
Sbjct: 235 GREL-------AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 345 IKGLCEVQKIDKIKEVLEGALEVG-----------------------------------G 369
I LC +I+ L L+ G G
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
P+ NTL+ G C+ GN+ +A+ VF M E P+ TY L+ G + A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 430 KLYDELLKKGI----------------------------LLRDDGSTPLVAAYKSMFQFL 461
+++++L G ++ + P V + + + L
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 462 CKNGKTSKAERGFRQLMKRGTQDP--TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
C G+ AE+ FRQ+ ++ P +Y L+ G K E Y L + R +
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
S Y +L+ G G P +A Q + KM+ P T + I+ K+G A +A ++
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Query: 580 LLLEG--KIRQNVTLSTHTVRLLFSNGLRDKG 609
L+ G K R +V T+ + L + R+ G
Sbjct: 588 LVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 182/406 (44%), Gaps = 53/406 (13%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+++LI +G + + T M G P++ T +SL+ RG T A ++++M+
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+G+ P+ +N L++GFC + + F M C P+I TY +L++G + G +
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M+ + P+VV YT ++ C EA + E M + P+ T+N
Sbjct: 404 DGAVYIWNKML--TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEAL----KVFE 398
IKGLC+ ++D ++V + P+ T N L++G A + EA ++F
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+ +EW S+TY+ L+ C+ G A +L +++ DG +P
Sbjct: 522 RGVEW----SSSTYNTLLHGSCNAGLPGIALQLVGKMMV-------DGKSP--------- 561
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLML--RRNF 516
D + ++I+ +CK+G E ++L L+ RR +
Sbjct: 562 -------------------------DEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKW 596
Query: 517 DPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
PD Y ++I GL + L++M+ + IVP+ +T+ ++
Sbjct: 597 RPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/461 (20%), Positives = 188/461 (40%), Gaps = 33/461 (7%)
Query: 243 KNSMVDDGFRFFQKMSS---FNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM----VKK 295
+ S V FF+ +++ F P +T+ ++ + G+V + +++ M
Sbjct: 52 QESCVPLALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
SEDL V+S Y + A+ +F + + G P+ YN ++ L +I
Sbjct: 110 SEDLFISVISV------YRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
I V ++ GF P+ T N L+ C ++ A K+ +M PD+ +Y+ +
Sbjct: 164 MIYMVYRD-MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ ++C +G + +L + P+V+ Y ++ LCK A R
Sbjct: 223 ISSMCEVGLVKEGRELAERF------------EPVVSVYNALINGLCKEHDYKGAFELMR 270
Query: 476 QLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
+++++G + + SY LI C G E + L ML+R P+ SL+ G +G
Sbjct: 271 EMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330
Query: 535 EPLLAYQTLQKMLKS-SIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLS 593
A +M++ + P +++++ G G ++ S+ + E N+
Sbjct: 331 TTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTY 390
Query: 594 THTVRLLFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLLEANKLLLFCLE 650
+ G D I + +G +V ++ L + K EA L+ +
Sbjct: 391 GSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450
Query: 651 KHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQP 691
++ + N I+GLC +L A ++ ++ ++ P
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 194/372 (52%), Gaps = 14/372 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NS+I + G +E+V++ M + SP+ VT+N+L+ L K + A + +L
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL-ARVL 391
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
++ G+ PD TFN LI+G C F++M S C+PD TYN L+D +C GK+
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A N++K M + V++Y TL+ G+C EA +F+EM G+ N+VTYN
Sbjct: 452 DEALNMLKQM--ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TLI GLC+ ++++ ++++ + + G PD T N+L+ C G++ +A + + M
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMI-MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+PD TY L+ LC G E A KL + KGI L TP AY + Q L
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL-----TP--HAYNPVIQGLF 621
Query: 463 KNGKTSKAERGFRQLMKRGTQDP--TSYKILIIGHCK-EGTFEAGYELLVLMLRRNFDPD 519
+ KT++A FR+++++ P SY+I+ G C G + LV +L + F P+
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Query: 520 SEIYQSLIDGLL 531
L +GLL
Sbjct: 682 FSSLYMLAEGLL 693
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 237/482 (49%), Gaps = 18/482 (3%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF-FN 164
AL+ + + G + ++ S +++ + + A NF I+ SN D++ FN
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF---IQEMSNQDGFFPDQYTFN 299
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+L+ +AG + ++++ M G P V T+NS++ L K G A V D+M+ T
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI-T 358
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+P+T T+N LI CK + V++ + ++S PD+ T+N+L+ G+C +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + + M +S+ PD +Y L+ C K +DEAL + ++M G + +TYNTL
Sbjct: 419 AMELFEEM--RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I G C+ K + +E+ + +EV G S ++ T NTL++G C + + +A ++ ++M+
Sbjct: 477 IDGFCKANKTREAEEIFD-EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
+PD TY+ L+ + C GD ++A + + +G P + Y ++ LCK
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-------NGCEPDIVTYGTLISGLCKA 588
Query: 465 GKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRN-FDPDSEI 522
G+ A + R + +G P +Y +I G ++ L ML +N PD+
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 523 YQSLIDGLLQKGEPLL-AYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y+ + GL G P+ A L ++L+ VP S+ + + GLL LV ++
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 708
Query: 582 LE 583
++
Sbjct: 709 MQ 710
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 158/599 (26%), Positives = 278/599 (46%), Gaps = 29/599 (4%)
Query: 104 SKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
S AL+ FN + F+ Y +L LGR+ + + + L +K + ++
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK---SSRCEMGTST 120
Query: 163 FNSLIRSYGRAGLFQESVKLFTSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F LI SY + L E + + M G+ P +N +L +L+ + + +M
Sbjct: 121 FLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKM 180
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
S +G+ PD TFN+LI+ C+ + + M S+ PD T+ T++ G G
Sbjct: 181 -SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK-GLKPNAVT 340
+ A + + MV+ + VS ++ G+C + +++AL +EM ++ G P+ T
Sbjct: 240 LDGALRIREQMVEFGCSWSN--VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+NTL+ GLC+ + E+++ L+ G+ PD T N++++G C G + EA++V ++M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQ-EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
+ P++ TY+ L+ LC E A +L L KGIL P V + S+ Q
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL-------PDVCTFNSLIQG 409
Query: 461 LCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
LC A F ++ +G + D +Y +LI C +G + +L M
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV- 578
Y +LIDG + + A + +M + + T+++++ GL K ++A L+
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 579 VLLLEGKIRQNVT---LSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KELIIFL 632
+++EG+ T L TH R G K IV + NG D+ LI L
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCR----GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 633 SQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQP 691
++ ++ A+KLL K N+ N VI+GL + +K +EA L+ E++E+ P
Sbjct: 586 CKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 198/392 (50%), Gaps = 16/392 (4%)
Query: 148 IKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK 207
+ + G ++ + ++++I S + +++ LFT M + G+ P V T++SL+ L
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 208 RGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIV 267
GR + A + +ML + P+ TFN LI F K + + + F +M + DP+IV
Sbjct: 288 YGRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
TYN+L++G C ++ A + MV S+D PDVV+Y TL+ G+C + + + + +F
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMV--SKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
+M +GL N VTY TLI G + D + V + + G P+ T NTL++G C
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS-DGVHPNIMTYNTLLDGLCKN 463
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
G L +A+ VFE + + K++PD TY+++ +C G E L+ L KG+
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV------- 516
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYE 506
P V AY +M CK G +A F ++ + G D +Y LI H ++G A E
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 507 LLVLMLRRNFDPDSEIY----QSLIDGLLQKG 534
L+ M F D+ Y L DG L KG
Sbjct: 577 LIKEMRSCRFAGDASTYGLVTDMLHDGRLDKG 608
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/549 (26%), Positives = 254/549 (46%), Gaps = 26/549 (4%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
E+V LF M PS+V F+ LL + K + ++ S F E + GV+ + YT+N
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYN 104
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
I+I C+ S + KM P IVT N+L++G C ++ A +V MV+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
PD V++TTL+ G EA+ + E MV KG +P+ VTY +I GLC+ + D
Sbjct: 165 G--YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+L +E G D +T+++ C ++++AL +F +M ++PD TYS L
Sbjct: 223 LALNLLN-KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ LC+ G + A +L ++L++ I P V + S+ K GK +AE+ F
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKI-------NPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 476 QLMKRGTQDP--TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
++++R DP +Y LI G C + ++ LM+ ++ PD Y +LI+G +
Sbjct: 335 EMIQRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 534 GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLS 593
+ + + + M + +V T T+ +++ G + + + ++ + N+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 594 THTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLL----LFCL 649
+ L NG +K + L + D+ I S + +A K+ LFC
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM---SEGMCKAGKVEDGWDLFCS 510
Query: 650 EKHHNI--DIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLEN--LRVALEAG 705
+ D+ NT+I G CK EA+ L+ ++ E G P S N +R L G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG-PLPDSGTYNTLIRAHLRDG 569
Query: 706 GRSKEVEFL 714
++ E +
Sbjct: 570 DKAASAELI 578
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 221/463 (47%), Gaps = 12/463 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N +I R ++ + M +G PS+VT NSLL R + A ++ D+M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT TF L+ G +++ + ++M C PD+VTY +++G+C+ G+
Sbjct: 163 EM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A N++ M K + DVV Y+T++ C +++D+AL +F EM +KG++P+ TY+
Sbjct: 222 DLALNLLNKMEKGK--IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI LC + +L LE +P+ T N+L++ G L EA K+F++M++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ P+ TY+ L+ C + A++++ ++ K L P V Y ++ C
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-------PDVVTYNTLINGFC 391
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K K FR + +RG + +Y LI G + + + M+ P+
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y +L+DGL + G+ A + + KS + P T++ + G+ K G + L L
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD 624
++ +V + GL+++ + + + ++G + D
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 205/441 (46%), Gaps = 54/441 (12%)
Query: 174 GLFQ-----ESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM------- 221
GLFQ E+V L M G P +VT+ +++ L KRG ++A ++ ++M
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 222 ---------------------------LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFF 254
+ G+ PD +T++ LI C D R
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 255 QKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYC 314
M +P++VT+N+L+D + GK+ A + M+++S ++P++V+Y +L+ G+C
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS--IDPNIVTYNSLINGFC 356
Query: 315 MKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDT 374
M +DEA +F MV K P+ VTYNTLI G C+ +K+ E+ + G +T
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD-MSRRGLVGNT 415
Query: 375 CTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
T TL++G A + + A VF++M+ V P+ TY+ L+ LC G E+A +++
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 435 LLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILII 493
L K + P + Y M + +CK GK F L +G + D +Y +I
Sbjct: 476 LQKSKM-------EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
G CK+G E Y L + M PDS Y +LI L+ G+ + + +++M
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588
Query: 554 TTSTFHSIL----AGLLKKGY 570
ST+ + G L KG+
Sbjct: 589 DASTYGLVTDMLHDGRLDKGF 609
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 206/416 (49%), Gaps = 14/416 (3%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+SL+ + G +E++ L + GVSP++ +N+L+ L K + + A+ +FD M
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM-G 394
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G+ P+ T++ILI FC+ +D F +M + YN+L++G C+ G +
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A + M+ K L P VV+YT+L+ GYC K I++AL ++ EM KG+ P+ T+ T
Sbjct: 455 AAEGFMAEMINKK--LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 344 LIKGLCEVQKI-DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L+ GL I D +K L + P+ T N ++ G+C G++++A + ++M E
Sbjct: 513 LLSGLFRAGLIRDAVK--LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD+ +Y L+ LC G A+ D L K L + Y + C
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE-------ICYTGLLHGFC 623
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ GK +A +++++RG D Y +LI G K + + LL M R PD
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
IY S+ID + G+ A+ M+ VP T+ +++ GL K G+ +E+ L
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 155/601 (25%), Positives = 265/601 (44%), Gaps = 38/601 (6%)
Query: 100 IKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKL 158
I P L+FFN+L GF H+ S+ +++ L +A A S+ +
Sbjct: 81 IDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPAS----SLLQTLLLRALK 136
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
FN L Y E KL +S +F+ L+ ++ R VF
Sbjct: 137 PSDVFNVLFSCY-------EKCKLSSSS----------SFDLLIQHYVRSRRVLDGVLVF 179
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
M++ + P+ T + L+ G K F M S PD+ Y ++ +C
Sbjct: 180 KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE 239
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
+ A ++ M D+N +V Y L+ G C KQ + EA+ + +++ K LKP+
Sbjct: 240 LKDLSRAKEMIAHMEATGCDVN--IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
VTY TL+ GLC+VQ+ + E+++ L + FSP +++L+ G G + EAL + +
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLR-FSPSEAAVSSLVEGLRKRGKIEEALNLVK 356
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+++++ V P+ Y+ L+ +LC F AE L+D + K G+ D Y +
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND-------VTYSILI 409
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
C+ GK A +++ G + Y LI GHCK G A + M+ + +
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 518 PDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
P Y SL+ G KG+ A + +M I P+ TF ++L+GL + G ++ L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 578 VVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KELIIFLSQ 634
+ E ++ N + G K F + + + G + D + LI L
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 635 SRKLLEANKLLLFCLEKHHNIDIDMCNT-VIEGLCKMKKLSEAFGLYYELVEKGNHQPLS 693
+ + EA K+ + L K + ++C T ++ G C+ KL EA + E+V++G L
Sbjct: 590 TGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 694 C 694
C
Sbjct: 649 C 649
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 231/522 (44%), Gaps = 45/522 (8%)
Query: 109 FFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL------------FSIKRKSNGTV 156
F+ + ++G ND +Y +++++ R L+ A +FL + NG
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 157 KLED--------------------RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVV 196
K D + SL+ Y G ++++L+ M G++PS+
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 197 TFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQK 256
TF +LL L + G A +F+EM + + V P+ T+N++I G+C+ + F F ++
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 257 MSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMK 316
M+ PD +Y L+ G+C G+ A V G+ K + +LN + YT LL G+C +
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE--ICYTGLLHGFCRE 625
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCT 376
++EAL V +EMV +G+ + V Y LI G + K K+ L + G PD
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK-HKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 377 LNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELL 436
++++ G+ EA +++ M+ P+ TY+ ++ LC G AE L ++
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM- 743
Query: 437 KKGILLRDDGSTPLVAAYKSMFQFLCKNG-KTSKAERGFRQLMKRGTQDPTSYKILIIGH 495
+ S P Y L K KA ++K + +Y +LI G
Sbjct: 744 ------QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 496 CKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTT 555
C++G E EL+ M+ PD Y ++I+ L ++ + A + M + I P
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 556 STFHSILAGLLKKGYAHESASLV-VLLLEGKIRQNVTLSTHT 596
+++++ G G ++ L +L +G I N T T T
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 9/339 (2%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
SKA +F + + G + SY ++ L + A+ F+ + + G +L + +
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK---GNCELNEICY 615
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
L+ + R G +E++ + M GV +V + L+ LK + + EM
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM-H 674
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G+ PD + +I K + F + M + C P+ VTY +++G+C+AG V
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNID-EALVVFEEMVDKGLKPNAVTYN 342
A + M S P+ V+Y L K +D + V + KGL N TYN
Sbjct: 735 EAEVLCSKMQPVSS--VPNQVTYGCFL-DILTKGEVDMQKAVELHNAILKGLLANTATYN 791
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI+G C +I++ E++ + G SPD T T++N C ++ +A++++ M E
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIG-DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
++PD Y+ L+ C G+ +A +L +E+L++G++
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/584 (25%), Positives = 256/584 (43%), Gaps = 87/584 (14%)
Query: 102 VPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRK-------SNG 154
V KA F+ + G Q+Y ++E R +N+ L +K++ + G
Sbjct: 362 VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 155 TV--------KLEDRF-----------------FNSLIRSYGRAGLFQESVKLFTSMKSV 189
TV L+ + + +LI+++ + F +++++ MK
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 190 GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
G++P + +NSL++ L K R + A+S EM+ G+ P+ +T+ I G+ + S
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPNAFTYGAFISGYIEASEFAS 540
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVK--------------- 294
++ ++M P+ V L++ C+ GKV A + + MV
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 295 ------------------KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
+ + + PDV SY L+ G+ N+ +A +F+EMV++GL P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
N + YN L+ G C +I+K KE+L+ + V G P+ T T+++G+C +G+L EA ++
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLD-EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
F++M + PDS Y+ LV C + D ERA ++ K G A + +
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK--------GCASSTAPFNA 771
Query: 457 MFQFLCKNGKTSKAERGFRQLM-----KRGTQDPTSYKILIIGHCKEGTFEAGYELLVLM 511
+ ++ K GKT +LM + G + +Y I+I CKEG EA EL M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
N P Y SL++G + G + + + + I P + I+ LK+G
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 572 HESASLV-VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVG 614
++ LV + + + LS T R L S GF VG
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLS------GFAKVG 929
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 221/473 (46%), Gaps = 15/473 (3%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
ALK + G +Y ++++ L + + L A++ L ++ S G V L++ ++
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLL--VEMDSLG-VSLDNHTYSL 317
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI + + L M S G++ ++ + ++ K G AK++FD M+++
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS- 376
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G+ P + LI G+C+ V G+ +M N TY T+V G+C +G + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
+N+VK M+ + P+VV YTTL++ + +A+ V +EM ++G+ P+ YN+LI
Sbjct: 437 YNIVKEMI--ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
GL + +++D+ + L +E G P+ T ++G+ A A K ++M E V
Sbjct: 495 IGLSKAKRMDEARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
P+ + L+ C G A Y ++ +GIL D T Y + L KN
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL--GDAKT-----YTVLMNGLFKND 606
Query: 466 KTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
K AE FR++ +G D SY +LI G K G + + M+ P+ IY
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
L+ G + GE A + L +M + P T+ +I+ G K G E+ L
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 182/409 (44%), Gaps = 59/409 (14%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI Y + G E+ + SM G+ T+ L+ L K + + A+ +F EM
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK- 621
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G+APD +++ +LI GF K + F +M P+++ YN L+ G CR+G+++ A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ M K L+P+ V+Y T++ GYC ++ EA +F+EM KGL P++ Y TL+
Sbjct: 682 KELLDEMSVKG--LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 346 KGLCEVQKIDK--------------------------------------IKEVLEGALEV 367
G C + +++ + +++G+ +
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
G P+ T N +++ C GNL A ++F +M + P TY+ L+ +G R
Sbjct: 800 FG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG--RR 856
Query: 428 AE--KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP 485
AE ++DE + GI P Y + K G T+KA Q+ + D
Sbjct: 857 AEMFPVFDEAIAAGI-------EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Query: 486 ------TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID 528
++ + L+ G K G E +++ M+R + PDS LI+
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/583 (22%), Positives = 252/583 (43%), Gaps = 95/583 (16%)
Query: 123 QSYFLMLEILGRARNLNVARNFLFSIKRK-------SNGTVKLEDRF-----------FN 164
++Y +++ RA N+ + ++ LF +++ +G +KL++ ++
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYD 281
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI + +++ L M S+GVS T++ L+ LLK + AK + EM+S
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS- 340
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+G+ Y ++ I K +++ F M + P Y +L++G CR V+
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ ++ M K++ ++P +Y T+++G C ++D A + +EM+ G +PN V Y TL
Sbjct: 401 GYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
IK + + VL+ E G +PD N+L+ G A ++EA +M+E
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
++P++ TY + +F A+K E+ + G+L T L+ Y CK
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY-------CKK 570
Query: 465 GKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
GK +A +R ++ +G I+G D++ Y
Sbjct: 571 GKVIEACSAYRSMVDQG----------ILG------------------------DAKTYT 596
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEG 584
L++GL + + A + ++M I P ++ ++ G K G +++S+ ++E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 585 KIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKL 644
+ NV + ++G +G + KEL+ S K L N +
Sbjct: 657 GLTPNVIIYNM----------------LLGGFCRSGEIEKAKELLD--EMSVKGLHPNAV 698
Query: 645 LLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+C T+I+G CK L+EAF L+ E+ KG
Sbjct: 699 T-YC-------------TIIDGYCKSGDLAEAFRLFDEMKLKG 727
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 147/641 (22%), Positives = 264/641 (41%), Gaps = 57/641 (8%)
Query: 94 FQVLRLIKV--PSKALKFFNWLPQMGFTHN--DQSYFLMLEILGRA-------------- 135
VLR +V PSK L FFNW+ T D FL L++
Sbjct: 66 LSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE 125
Query: 136 RNLNVARNFLFSIKRKSNGTVKLEDR--FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSP 193
RN VA + SI R S V D F L Y G +E+V +F+S + + P
Sbjct: 126 RNWPVAEVW-SSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVP 184
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV------ 247
+ LL LL+ R ++ V+ M+ V D T+++LI C+ V
Sbjct: 185 RLSRCKVLLDALLRWNRLDLFWDVYKGMVER-NVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 248 ---------------DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
D + + M P TY+ L+DG+C+ +++ A +++ M
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
S ++ D +Y+ L+ G +N D A + EMV G+ Y+ I + +
Sbjct: 304 --DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEG 361
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
++K K + +G + G P +L+ G+C N+ + ++ +M + + TY
Sbjct: 362 VMEKAKALFDGMI-ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
+V+ +C GD + A + E++ G P V Y ++ + +N + A R
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASG-------CRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 473 GFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
+++ ++G D Y LIIG K + LV M+ P++ Y + I G +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 532 QKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVT 591
+ E A + +++M + ++P ++ KKG E+ S +++ I +
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 592 LSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE---LIIFLSQSRKLLEANKLLLFC 648
T + LF N D I + G D+ LI S+ + +A+ +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 649 LEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNH 689
+E+ ++ + N ++ G C+ ++ +A L E+ KG H
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS 216
K D +N +I + G + + +LF M++ + P+V+T+ SLL K GR
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFN-----CDPDIVTYNT 271
VFDE ++ G+ PD ++++I F K M +M + N C I T
Sbjct: 862 VFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN 318
L+ G + G+++ A V++ MV+ PD + L+ C+ N
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQ--YIPDSATVIELINESCISSN 965
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 216/452 (47%), Gaps = 47/452 (10%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+SL+ Y ++V L M +G P +TF +L+ L + + A ++ D M+
Sbjct: 82 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G P+ T+ +++ G CK +D F KM + + D+V +NT++D +C+ V
Sbjct: 142 QR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYC---------------MKQNIDEALVVF- 326
A N+ K M +++ + P+VV+Y++L+ C +++ I+ LV F
Sbjct: 201 DDALNLFKEM--ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258
Query: 327 -------------------EEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
++M+ + + P+ TYN+LI G C ++DK K++ E +
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
F PD T NTL+ G C + + + ++F +M + D+ TY+ L++ L H GD +
Sbjct: 319 DCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 428 AEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPT 486
A+K++ +++ DG P + Y + LC NGK KA F + K + D
Sbjct: 378 AQKVFKQMVS-------DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
Y +I G CK G + G++L + + P+ Y ++I GL K AY L+KM
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 490
Query: 547 LKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
+ +P + T+++++ L+ G SA L+
Sbjct: 491 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 522
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 205/413 (49%), Gaps = 13/413 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ ++ + G + L M++ + VV FN+++ L K + A ++F EM
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM- 210
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
T G+ P+ T++ LI C D + M +P++VT+N L+D + GK
Sbjct: 211 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 270
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M+K+S ++PD+ +Y +L+ G+CM +D+A +FE MV K P+ TYN
Sbjct: 271 VEAEKLHDDMIKRS--IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 328
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TLIKG C+ ++++ E+ + G DT T TL+ G + G+ + A KVF++M+
Sbjct: 329 TLIKGFCKSKRVEDGTELFR-EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V PD TYS+L+ LC+ G E+A +++D + K I L + Y +M + +C
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD-------IYIYTTMIEGMC 440
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K GK F L +G + + +Y +I G C + + Y LL M PDS
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 500
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
Y +LI L+ G+ + + +++M V ST ++A +L G +S
Sbjct: 501 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKS 552
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 221/465 (47%), Gaps = 14/465 (3%)
Query: 163 FNSLIRSYGRAGLFQE--SVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
FN L+ + + F S+ L M +G PS+VT +SLL R + A ++ D+
Sbjct: 45 FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 104
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
M+ G PDT TF LI G ++ + +M C P++VTY +V+G+C+ G
Sbjct: 105 MVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 163
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ A N++ M ++ + DVV + T++ C +++D+AL +F+EM KG++PN VT
Sbjct: 164 DIDLAFNLLNKM--EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 221
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y++LI LC + ++L +E +P+ T N L++ G EA K+ + M
Sbjct: 222 YSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
++ + PD TY+ L+ C ++A+++++ ++ K P + Y ++ +
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-------PDLDTYNTLIKG 333
Query: 461 LCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
CK+ + FR++ RG D +Y LI G +G + ++ M+ PD
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
Y L+DGL G+ A + M KS I + +++ G+ K G + L
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD 624
L ++ NV + L S L + + ++ + ++G + D
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 498
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/551 (24%), Positives = 248/551 (45%), Gaps = 49/551 (8%)
Query: 169 SYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS--VFDEMLSTYG 226
S+G+ +++ LF M PS+ FN LL + K + ++ S + +M+ G
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMK-LG 74
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
P T + L+ G+C + D +M PD +T+ TL+ G+ K A
Sbjct: 75 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
+V MV++ P++V+Y ++ G C + +ID A + +M ++ + V +NT+I
Sbjct: 135 ALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 192
Query: 347 GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
LC+ + +D + + +E G P+ T ++L++ C+ G ++A ++ M+E K+
Sbjct: 193 SLCKYRHVDDALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 251
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
P+ T++ L+ G F AEKL+D+++K+ I P + Y S+ C + +
Sbjct: 252 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI-------DPDIFTYNSLINGFCMHDR 304
Query: 467 TSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQS 525
KA++ F ++ + D +Y LI G CK E G EL M R D+ Y +
Sbjct: 305 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364
Query: 526 LIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGK 585
LI GL G+ A + ++M+ + P T+ +L GL G ++ + + + +
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424
Query: 586 IRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLL 645
I+ ++ + T + + G D G+ +F S S K ++ N +
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWD------------------LFCSLSLKGVKPNVVT 466
Query: 646 LFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLEN--LRVALE 703
NT+I GLC + L EA+ L ++ E G P S N +R L
Sbjct: 467 Y--------------NTMISGLCSKRLLQEAYALLKKMKEDG-PLPDSGTYNTLIRAHLR 511
Query: 704 AGGRSKEVEFL 714
G ++ E +
Sbjct: 512 DGDKAASAELI 522
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 227/466 (48%), Gaps = 15/466 (3%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI ++ +AG E++ MK +G+ +V + SL+ G + K++FDE+L
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER- 276
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G +P T+N LIRGFCK + + F+ M P++ TY L+DG+C GK K A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ M++K E+ P+ V+Y ++ C + +A+ + E M + +P+ +TYN L+
Sbjct: 337 LQLLNLMIEKDEE--PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFS-PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
GLC +D+ ++L L+ ++ PD + N L++G C L++AL +++ ++E
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
D T ++L+ + GD +A +L+ ++ I+ D Y +M CK
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD-------TYTAMIDGFCKT 507
Query: 465 GKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
G + A +G M+ P+ Y L+ CKEG+ + + L M R N PD
Sbjct: 508 GMLNVA-KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL 582
+ +IDG L+ G+ A L M ++ + P T+ ++ LK GY E+ S ++
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV 626
Query: 583 EGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKEL 628
+ + + ++ S G DK +V L D ++D KEL
Sbjct: 627 DSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD-KEL 671
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 251/535 (46%), Gaps = 20/535 (3%)
Query: 190 GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
G + +V N LL L + A S+ EM + PD +++N +IRGFC+ ++
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN-SLMPDVFSYNTVIRGFCEGKELEK 195
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
+M C +VT+ L+D C+AGK+ A +K M K L D+V YT+L
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM--KFMGLEADLVVYTSL 253
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+RG+C +D +F+E++++G P A+TYNTLI+G C++ ++ + E+ E +E G
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE-RG 312
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
P+ T L++G C G EAL++ M+E +P++ TY++++ LC G A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDP--T 486
++ EL+KK + P Y + LC G +A + ++K + DP
Sbjct: 373 EIV-ELMKK------RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
SY LI G CKE ++ L++ + D L++ L+ G+ A + +++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 547 LKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLR 606
S IV + T+ +++ G K G + + L+ + +++ +V + L G
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 607 DKGFRIVGLLYDNGYMVDMKELIIFLSQSRK---LLEANKLLLFCLEKHHNIDIDMCNTV 663
D+ +R+ + + D+ I + S K + A LL+ + D+ + +
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 664 IEGLCKMKKLSEAFGLYYELVEKGNHQPLS--CLENLRVALEAGGRSKEVEFLSK 716
I K+ L EA + ++V+ G +P + C L+ + G K E + K
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSG-FEPDAHICDSVLKYCISQGETDKLTELVKK 659
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 190/391 (48%), Gaps = 10/391 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+LIR + + G +E+ ++F M GV P+V T+ L+ L G+T A + + M+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
P+ T+NI+I CK+ +V D + M PD +TYN L+ G+C G +
Sbjct: 345 EK-DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A ++ M+K S +PDV+SY L+ G C + + +AL +++ +V+K + VT N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L+ + ++K E+ + + ++ T +++G C G LN A + KM
Sbjct: 464 ILLNSTLKAGDVNKAMELWK-QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
++QP Y+ L+ +LC G ++A +L++E+ + D + P V ++ M
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR-------DNNFPDVVSFNIMIDGSL 575
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K G AE + + G + D +Y LI K G + M+ F+PD+
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
I S++ + +GE + ++K++ IV
Sbjct: 636 ICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
+KA++ + + N +Y M++ + LNVA+ L + R S + D +
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFD--Y 532
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N L+ S + G ++ +LF M+ P VV+FN ++ LK G A+S+ M S
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-S 591
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G++PD +T++ LI F K +D+ FF KM +PD ++++ G+
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 284 TAHNVVKGMVKK 295
+VK +V K
Sbjct: 652 KLTELVKKLVDK 663
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 207/419 (49%), Gaps = 10/419 (2%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
G+ H+ S+ M+ L A A + + ++ K V ED S+ R YGR
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLI--VRMKIENCVVSEDILL-SICRGYGRVHRP 102
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
+S+++F MK PS + ++L IL++ + N+A + M G+ P + N+
Sbjct: 103 FDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM-REIGLPPTVASLNV 161
Query: 237 LIRGFCKN-SMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
LI+ C+N VD G + F +M CDPD TY TL+ G+CR G++ A + MV+K
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
D P VV+YT+L+ G C +N+DEA+ EEM KG++PN TY++L+ GLC+ +
Sbjct: 222 --DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSL 279
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+ E+ E + G P+ T TL+ G C + EA+++ ++M ++PD+ Y +
Sbjct: 280 QAMELFE-MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ C I F A DE++ GI V + + LC N S+A +
Sbjct: 339 ISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYL 397
Query: 476 QLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
+ RG + + + + L+ CK+G F+ +L+ ++ P ++ LI L K
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDK 456
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 19/276 (6%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
LK F +P+ G + +Y ++ L R ++ A+ + K + + S
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT---YTS 232
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI + E+++ MKS G+ P+V T++SL+ L K GR+ A +F EM+
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF-EMMMAR 291
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G P+ T+ LI G CK + + +M+ PD Y ++ G C K + A
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA 351
Query: 286 HN-----VVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
N ++ G+ N V + ++RG C A ++ M +G+ T
Sbjct: 352 ANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVET 410
Query: 341 YNTLIKGLCE-------VQKIDKIKEVLEGALEVGG 369
+L+K LC+ VQ +D+I V +G + G
Sbjct: 411 LESLVKCLCKKGEFQKAVQLVDEI--VTDGCIPSKG 444
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 140/320 (43%), Gaps = 22/320 (6%)
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
++L+VF KM ++ P Y ++ L A K Y + R+ G P V
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM-------REIGLPPTV 156
Query: 452 AAYKSMFQFLCKNGKTSKAE-RGFRQLMKRGTQDPTSYK--ILIIGHCKEGTFEAGYELL 508
A+ + + LC+N T A + F ++ KRG DP SY LI G C+ G + +L
Sbjct: 157 ASLNVLIKALCRNDGTVDAGLKIFLEMPKRGC-DPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 509 VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
M+ ++ P Y SLI+GL A + L++M I P T+ S++ GL K
Sbjct: 216 TEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD 275
Query: 569 GYAHESASLVVLLLEGKIRQN-VTLSTHTVRLLFSNGLRDK-----GFRIVGLLYDNGYM 622
G + ++ L +++ R N VT +T L +++ + GL D G
Sbjct: 276 GRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLY 335
Query: 623 VDMKELIIFLSQSRKLLE-ANKLLLFCLEKHH---NIDIDMCNTVIEGLCKMKKLSEAFG 678
+ +S+ R+ ++++L + + NI + N V+ GLC S AF
Sbjct: 336 GKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFT 394
Query: 679 LYYELVEKGNHQPLSCLENL 698
LY + +G + LE+L
Sbjct: 395 LYLSMRSRGISVEVETLESL 414
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 162/626 (25%), Positives = 302/626 (48%), Gaps = 55/626 (8%)
Query: 96 VLRLIKV-PSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFS-IKRKS 152
+LR +++ P L+ FN Q F + ++Y M+ IL RARN +++L +
Sbjct: 76 ILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNH 135
Query: 153 NGTV------------KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNS 200
+G V F+ +++ Y GL + ++ +F +M + G PS+++ NS
Sbjct: 136 SGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNS 195
Query: 201 LLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM-SS 259
LL L+++G +A V+D+M+S + V+PD +T +I++ +C++ VD F ++ SS
Sbjct: 196 LLSNLVRKGENFVALHVYDQMIS-FEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESS 254
Query: 260 FNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNI 319
+ ++VTYN+L++G G V+ V++ M ++ ++ +VV+YT+L++GYC K +
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERG--VSRNVVTYTSLIKGYCKKGLM 312
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
+EA VFE + +K L + Y L+ G C +I V + +E+G +T N+
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG-VRTNTTICNS 371
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK- 438
L+NG+C +G L EA ++F +M +W ++PD TY+ LV C G + A KL D++ +K
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 439 --------GILL----RDDGSTPLVAAYKSM---------------FQFLCKNGKTSKAE 471
ILL R +++ +K M + L K G ++A
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 472 RGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
+ + ++ RG D + ++I G CK E+L + P + YQ+L G
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 531 LQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
+ G A+ + M + I PT ++++++G K + ++ A LV+ L + V
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTV 611
Query: 591 TLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLE 650
+ + G+ DK + + + G +++ I + L +K+ CL
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVN---ICSKIANSLFRLDKIDEACLL 668
Query: 651 KHHNIDIDMCNTVIEGLCKMKKLSEA 676
+D D+ ++ G +K+ EA
Sbjct: 669 LQKIVDFDL---LLPGYQSLKEFLEA 691
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 157/633 (24%), Positives = 266/633 (42%), Gaps = 93/633 (14%)
Query: 135 ARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPS 194
R+ NV + +F+ + +S+ ++L +NSLI Y G + ++ M GVS +
Sbjct: 236 CRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRN 295
Query: 195 VVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFF 254
VVT+ SL+ K+G A+ VF E+L + D + + +L+ G+C+ + D R
Sbjct: 296 VVTYTSLIKGYCKKGLMEEAEHVF-ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH 354
Query: 255 QKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYC 314
M + N+L++G C++G++ A + M S L PD +Y TL+ GYC
Sbjct: 355 DNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS--LKPDHHTYNTLVDGYC 412
Query: 315 MKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI----------------- 357
+DEAL + ++M K + P +TYN L+KG + +
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 358 --KEVLEGALEVGGFS---------------PDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+LE ++G F+ DT TLN +++G C +NEA ++ + +
Sbjct: 473 SCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
++ +P TY L +G+ + A + + + +KGI P + Y ++
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF-------PTIEMYNTLISG 585
Query: 461 LCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRR----N 515
K +K +L RG T +Y LI G C G + Y M+ + N
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN 645
Query: 516 FDPDSEIYQSL-----IDG---LLQK----GEPLLAYQTLQKMLKSS------------- 550
+ S+I SL ID LLQK L YQ+L++ L++S
Sbjct: 646 VNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAES 705
Query: 551 ---------IVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLF 601
+VP ++ +AGL K G ++ L LL +T +L
Sbjct: 706 VENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS---DRFIPDEYTYTILI 762
Query: 602 SN----GLRDKGFRIVGLLYDNGYM---VDMKELIIFLSQSRKLLEANKLLLFCLEKHHN 654
G +K F + + G + V LI L + + A +LL +K
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 655 IDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ NT+I+GL K ++EA L +++EKG
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 179/461 (38%), Gaps = 113/461 (24%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N L++ Y R G F + + L+ M GV+ ++ ++LL L K G N A +++ +L
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ G+ DT T N++I G CK V++ ++ F C P + TY L G + G +
Sbjct: 499 AR-GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNL 557
Query: 283 KTAHNVVKGMVKK---------------------------------SEDLNPDVVSYTTL 309
K A V + M +K + L P V +Y L
Sbjct: 558 KEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGAL 617
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID-------------- 355
+ G+C ID+A EM++KG+ N + + L + KID
Sbjct: 618 ITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDL 677
Query: 356 -----------------------KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
KI E +E + P+ N + G C AG L +
Sbjct: 678 LLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLED 737
Query: 393 ALKVFEKMMEW-KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
A K+F ++ + PD TY++L+ GD +A L DE+ KGI+
Sbjct: 738 ARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII---------- 787
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLM 511
+ +Y LI G CK G + LL +
Sbjct: 788 -------------------------------PNIVTYNALIKGLCKLGNVDRAQRLLHKL 816
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
++ P++ Y +LIDGL++ G A + +KM++ +V
Sbjct: 817 PQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 154/639 (24%), Positives = 302/639 (47%), Gaps = 36/639 (5%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A + F+ +P+ G N+ ++ +++ +A + L +++ S G + +N+
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME--SFGVLP-NKVIYNT 222
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM-LST 224
++ S+ R G +S K+ M+ G+ P +VTFNS + L K G+ A +F +M L
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 225 Y-GVA-PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
Y G+ P++ T+N++++GFCK +++D F+ + + + +YN + G+ R GK
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A V+K M K + P + SY L+ G C + +A + M G+ P+AVTY
Sbjct: 343 IEAETVLKQMTDKG--IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG 400
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L+ G C V K+D K +L+ + P+ T N L++ G ++EA ++ KM E
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCL-PNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG-----------ILLRDDG----- 446
D+ T +++V LC G+ ++A ++ + G I L DD
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 447 STPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGY 505
P + Y ++ LCK G+ ++A+ F ++M Q D +Y I I CK+G + +
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 506 ELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
+L M ++ E Y SLI GL K + + + +M + I P T+++ + L
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 566 LKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM 625
+ ++ + LL+ +++N+ + + + L + F + +++ +
Sbjct: 640 CEGEKVEDATN----LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695
Query: 626 KELIIF------LSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGL 679
++ ++ L + +LL+A +LL L++ + + ++E LCK +L A G+
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 680 YYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRM 718
++++++G + L + L G KE + +M
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 139/540 (25%), Positives = 247/540 (45%), Gaps = 50/540 (9%)
Query: 182 LFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGF 241
L+ M G++P TFN L+ L + A+ +FDEM G P+ +TF IL+RG+
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM-PEKGCKPNEFTFGILVRGY 192
Query: 242 CKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNP 301
CK + D G M SF P+ V YNT+V CR G+ + +V+ M + E L P
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM--REEGLVP 250
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEM-VDKGL---KPNAVTYNTLIKGLCEVQKIDKI 357
D+V++ + + C + + +A +F +M +D+ L +PN++TYN ++KG C+V ++
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 358 KEVLEGALEVGGFSPDTCTL---NTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
K + E E + D +L N + G G EA V ++M + + P +Y++
Sbjct: 311 KTLFESIRE----NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ LC +G A+ + L++ +G P Y + C GK A+
Sbjct: 367 LMDGLCKLGMLSDAKTIVG-------LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 475 RQLMKRGTQDPTSYKILIIGHC--KEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ 532
+++M R P +Y I+ H K G ELL M + + D+ ++DGL
Sbjct: 420 QEMM-RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 533 KGEPLLAYQTLQKM-----------------------LKSSIVPTTSTFHSILAGLLKKG 569
GE A + ++ M ++++ +P T+ ++L GL K G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 570 YAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMK--- 626
E+ +L ++ K++ + + G FR++ + G ++
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 627 ELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEK 686
LI+ L ++ E + L+ EK + +I NT I+ LC+ +K+ +A L E+++K
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 209/453 (46%), Gaps = 39/453 (8%)
Query: 124 SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLF 183
SY ++++ L + L+ A+ + +KR NG + + L+ Y G + L
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKR--NGVCP-DAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 184 TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK 243
M P+ T N LL L K GR + A+ + +M + G DT T NI++ G C
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEKGYGLDTVTCNIIVDGLCG 478
Query: 244 NSMVDDGFRFFQKM------------SSF-----------NCDPDIVTYNTLVDGVCRAG 280
+ +D + M +S+ NC PD++TY+TL++G+C+AG
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ A N+ M+ E L PD V+Y + +C + I A V ++M KG + T
Sbjct: 539 RFAEAKNLFAEMM--GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLET 596
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
YN+LI GL +I +I +++ ++ G SP+ CT NT + C + +A + ++M
Sbjct: 597 YNSLILGLGIKNQIFEIHGLMD-EMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
M+ + P+ ++ L+ C + DF+ A+++++ + I + +G Y MF
Sbjct: 656 MQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS--ICGQKEG------LYSLMFNE 707
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDPTS-YKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
L G+ KA ++ RG + T YK L+ CK+ E +L M+ R + D
Sbjct: 708 LLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
+IDGL + G A KM++ + V
Sbjct: 768 PAALMPVIDGLGKMGNKKEANSFADKMMEMASV 800
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 226/522 (43%), Gaps = 43/522 (8%)
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
P Y +N+L+ K V+ ++ M P T+N L+ +C + V A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
M +K P+ ++ L+RGYC D+ L + M G+ PN V YNT++
Sbjct: 170 FDEMPEKG--CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 349 CEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV--- 405
C + D ++++E E G PD T N+ ++ C G + +A ++F M +
Sbjct: 228 CREGRNDDSEKMVEKMREE-GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 406 -QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
+P+S TY+++++ C +G E A+ L++ +R++ + +Y Q L ++
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFES-------IRENDDLASLQSYNIWLQGLVRH 339
Query: 465 GKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
GK +AE +Q+ +G P+ SY IL+ G CK G ++ LM R PD+
Sbjct: 340 GKFIEAETVLKQMTDKGI-GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL 582
Y L+ G G+ A LQ+M++++ +P T + +L L K G E+ L+ +
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 583 EGKIRQNVTLSTHTVRLLFSNGLRDKGFRIV-------------------GLLYD----N 619
E + V L +G DK IV GL+ D N
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 620 GYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEA 676
+ D+ L+ L ++ + EA L + + D N I CK K+S A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 677 FGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRM 718
F + ++ +KG H+ L +L + L + E+ L M
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 248/514 (48%), Gaps = 18/514 (3%)
Query: 178 ESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNIL 237
++V LF M PS+V FN LL + K + + S+ ++M T G++ D YT++I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSIF 124
Query: 238 IRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSE 297
I FC+ S + KM +PDIVT ++L++G C + ++ A +V MV+
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG- 183
Query: 298 DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI 357
PD ++TTL+ G + EA+ + ++MV +G +P+ VTY T++ GLC+ ID
Sbjct: 184 -YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 358 KEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
+L +E + NT+++ C ++ A+ +F +M ++P+ TY+ L+
Sbjct: 243 LNLLN-KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 418 NLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL 477
LC+ G + A +L +L+K I P V + ++ K GK +AE+ ++
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKI-------NPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 478 MKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEP 536
++R D +Y +LI G C + ++ M+ ++ P+ + Y +LI+G +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 537 LLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHT 596
+ ++M + +V T T+ +I+ G + G + + ++ ++ ++ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 597 VRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHH 653
+ L S G D I L + +++ +I + ++ K+ EA LFC
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD--LFC-SLSI 531
Query: 654 NIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
D+ NT+I GLC + L EA L+ ++ E G
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 200/416 (48%), Gaps = 12/416 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++ I + R ++ + M +G P +VT +SLL R + A ++ D+M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT+TF LI G ++ + +M C PD+VTY T+V+G+C+ G +
Sbjct: 181 EM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A N++ M ++ + +VV + T++ C ++++ A+ +F EM KG++PN VTYN
Sbjct: 240 DLALNLLNKM--EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI LC + +L LE +P+ T N L++ G L EA K+ E+M++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD+ TY++L+ C + A++++ ++ K L P + Y ++ C
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-------PNIQTYNTLINGFC 409
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K + FR++ +RG + +Y +I G + G ++ + M+ D
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
Y L+ GL G+ A + + KS + +++++ G+ K G E+ L
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 206/404 (50%), Gaps = 25/404 (6%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
AL N + N + +++ L + R++ VA + ++ K ++ +NS
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG---IRPNVVTYNS 298
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI G + ++ +L ++M ++P+VVTFN+L+ K G+ A+ + +EM+
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR- 357
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
+ PDT T+N+LI GFC ++ +D+ + F+ M S +C P+I TYNTL++G C+ +V+
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
+ + M ++ L + V+YTT+++G+ + D A +VF++MV + + +TY+ L+
Sbjct: 418 VELFREMSQRG--LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 346 KGLCEVQKIDK----IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
GLC K+D K + + +E+ F NT++ G C AG + EA +F +
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIF-----IYNTMIEGMCKAGKVGEAWDLFCSL- 529
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
++PD TY+ ++ LC +R + D+L +K +++DG+ P Y ++ +
Sbjct: 530 --SIKPDVVTYNTMISGLCS----KRLLQEADDLFRK---MKEDGTLPNSGTYNTLIRAN 580
Query: 462 CKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGY 505
++ + + +++ G S L+ +G + +
Sbjct: 581 LRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSF 624
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 205/476 (43%), Gaps = 49/476 (10%)
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGV------------------------------ 276
VDD F M P IV +N L+ V
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 277 -----CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
CR ++ A V+ M+K + PD+V+ ++LL GYC + I +A+ + ++MV+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYE--PDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
G KP+ T+ TLI GL K + +++ ++ G PD T T++NG C G+++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDID 240
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
AL + KM +++ + ++ ++ +LC E A L+ E+ KGI P V
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI-------RPNV 293
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEAGYELLVL 510
Y S+ LC G+ S A R ++ K+ + ++ LI KEG +L
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGY 570
M++R+ DPD+ Y LI+G A Q + M+ +P T+++++ G K
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 571 AHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELII 630
+ L + + + N T ++ F G D + + N D+ I
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 631 F---LSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYEL 683
L KL A + + + ++I + NT+IEG+CK K+ EA+ L+ L
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 165/373 (44%), Gaps = 12/373 (3%)
Query: 319 IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
+D+A+ +F +MV P+ V +N L+ + ++ K + + + E ++ G S D T +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE-QMQTLGISHDLYTYS 122
Query: 379 TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
+N C L+ AL V KMM+ +PD T S L+ CH A L D++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 439 GILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCK 497
G P + ++ L + K S+A Q+++RG Q D +Y ++ G CK
Sbjct: 183 GY-------KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 498 EGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
G + LL M + I+ ++ID L + +A +M I P T
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLY 617
++S++ L G +++ L+ +LE KI NV + F G + ++ +
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 618 DNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLS 674
D LI +L EA ++ F + K +I NT+I G CK K++
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 675 EAFGLYYELVEKG 687
+ L+ E+ ++G
Sbjct: 416 DGVELFREMSQRG 428
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 192/375 (51%), Gaps = 16/375 (4%)
Query: 163 FNSLIRSYGRAGLFQESVKL--FTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
FN +I + FQ S+ L M +G P VT SL+ +R R + A S+ D+
Sbjct: 123 FNIVINCF--CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
M+ G PD +N +I CK V+D F FF+++ P++VTY LV+G+C +
Sbjct: 181 MVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ A ++ M+KK + P+V++Y+ LL + + EA +FEEMV + P+ VT
Sbjct: 240 RWSDAARLLSDMIKKK--ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y++LI GLC +ID+ ++ + + G + D + NTL+NG C A + + +K+F +M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLA-DVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
+ + ++ TY+ L++ GD ++A++ + ++ GI +P + Y +
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI-------SPDIWTYNILLGG 409
Query: 461 LCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
LC NG+ KA F + KR D +Y +I G CK G E + L + + PD
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 520 SEIYQSLIDGLLQKG 534
Y +++ GL KG
Sbjct: 470 IVTYTTMMSGLCTKG 484
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 203/431 (47%), Gaps = 12/431 (2%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
+++ LF+ M PS+V FN LL ++K + ++ S+ +M G+ D YTFN
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTFN 124
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
I+I FC V KM +PD VT +LV+G CR +V A ++V MV+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
PD+V+Y ++ C + +++A F+E+ KG++PN VTY L+ GLC +
Sbjct: 185 G--YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+L ++ +P+ T + L++ G + EA ++FE+M+ + PD TYS L
Sbjct: 243 DAARLLSDMIK-KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ LC + A +++D ++ KG L V +Y ++ CK + + FR
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLAD-------VVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 476 QLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
++ +RG + +Y LI G + G + E M PD Y L+ GL G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
E A + M K + T+ +++ G+ K G E+ SL L ++ ++ T
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 595 HTVRLLFSNGL 605
+ L + GL
Sbjct: 475 TMMSGLCTKGL 485
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 190/378 (50%), Gaps = 24/378 (6%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N++I S + ++ F ++ G+ P+VVT+ +L+ L R + A + +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ P+ T++ L+ F KN V + F++M + DPDIVTY++L++G+C ++
Sbjct: 253 KK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A+ + MV K DVVSY TL+ G+C + +++ + +F EM +GL N VTYN
Sbjct: 312 DEANQMFDLMVSKG--CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TLI+G + +DK +E ++ G SPD T N L+ G C+ G L +AL +FE M +
Sbjct: 370 TLIQGFFQAGDVDKAQEFFS-QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
++ D TY+ ++R +C G E A L+ L KG+ P + Y +M LC
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL-------KPDIVTYTTMMSGLC 481
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHC--KEGTFEAGYELLVLMLRRNFDPDS 520
G + E + ++ + G L+ C +G EL+ ML + P
Sbjct: 482 TKGLLHEVEALYTKMKQEG---------LMKNDCTLSDGDITLSAELIKKMLSCGYAP-- 530
Query: 521 EIYQSLIDGLLQKGEPLL 538
+ + + G+ +K LL
Sbjct: 531 SLLKDIKSGVCKKALSLL 548
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 219/517 (42%), Gaps = 79/517 (15%)
Query: 206 LKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPD 265
L+ + N A +F +M+ + P FN L+ K D +KM D
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 266 IVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVV 325
+ T+N +++ C +V A +++ M+K + PD V+ +L+ G+C + + +A+ +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYE--PDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 326 FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
++MV+ G KP+ V YN +I LC+ ++++ + + +E G P+ T L+NG C
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK-EIERKGIRPNVVTYTALVNGLC 236
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
N+ ++A ++ M++ K+ P+ TYS L+ G A++L++E+++ I
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI----- 291
Query: 446 GSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAG 504
P + Y S+ LC + + +A + F ++ +G D SY LI G CK E G
Sbjct: 292 --DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 505 YELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
+L M +R ++ Y +LI G Q G+ A + +M I P T++ +L
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL-- 407
Query: 565 LLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD 624
G L DNG +
Sbjct: 408 -------------------------------------------------GGLCDNGEL-- 416
Query: 625 MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELV 684
K L+IF ++ ++DI TVI G+CK K+ EA+ L+ L
Sbjct: 417 EKALVIFEDMQKR--------------EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 685 EKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRMPNE 721
KG + + L G EVE L +M E
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 145/586 (24%), Positives = 267/586 (45%), Gaps = 21/586 (3%)
Query: 107 LKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
L F + ++G+ + ++ + ++ A + L +K S + + +N
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS---LDADIVLYNVC 244
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
I S+G+ G + K F +++ G+ P VT+ S++ +L K R + A +F+ +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
V P TY +N +I G+ D+ + ++ + P ++ YN ++ + + GKV A
Sbjct: 305 V-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
V + M K D P++ +Y L+ C +D A + + M GL PN T N ++
Sbjct: 364 KVFEEMKK---DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 347 GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
LC+ QK+D+ + E ++ +PD T +L++G G +++A KV+EKM++ +
Sbjct: 421 RLCKSQKLDEACAMFE-EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
+S Y+ L++N + G E K+Y +++ + +P + + + K G+
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN-------CSPDLQLLNTYMDCMFKAGE 532
Query: 467 TSKAERGFRQL-MKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQS 525
K F ++ +R D SY ILI G K G YEL M + D+ Y
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 526 LIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGK 585
+IDG + G+ AYQ L++M PT T+ S++ GL K E+ L +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 586 IRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLL 645
I NV + + + G D+ + I+ L G ++ L K E N+ L
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 646 LFCLEKHHNIDID----MCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ C + + +I GLCK++K ++AF + E+ ++G
Sbjct: 713 V-CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/587 (25%), Positives = 263/587 (44%), Gaps = 21/587 (3%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A KFF+ + G ++ +Y M+ +L +A L+ A +++ +N+
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA---YNT 313
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
+I YG AG F E+ L ++ G PSV+ +N +L L K G+ + A VF+EM
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD- 372
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
AP+ T+NILI C+ +D F M P++ T N +VD +C++ K+ A
Sbjct: 373 -AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
+ + M K PD +++ +L+ G +D+A V+E+M+D + N++ Y +LI
Sbjct: 432 CAMFEEMDYKV--CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
K + + ++ + + SPD LNT M+ AG + +FE++ +
Sbjct: 490 KNFFNHGRKEDGHKIYKDMIN-QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
PD+ +YS+L+ L G +L+ + ++G +L AY + CK G
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD-------TRAYNIVIDGFCKCG 601
Query: 466 KTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
K +KA + ++ +G + PT +Y +I G K + Y L + + + IY
Sbjct: 602 KVNKAYQLLEEMKTKGFE-PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
SLIDG + G AY L+++++ + P T++S+L L+K +E+ + E
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 584 GKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLLE 640
K N + L +K F + G + +I L+++ + E
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 641 ANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
A L D N +IEGL + +AF L+ E +G
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 160/670 (23%), Positives = 271/670 (40%), Gaps = 131/670 (19%)
Query: 96 VLRLIKVPSKALKFFNWLPQ-MGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNG 154
VLR +K ++A+++F W + H +SY +L ++ R RN
Sbjct: 71 VLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRN----------------- 113
Query: 155 TVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN-- 212
F++L + G M G PSV T ++L +K +
Sbjct: 114 --------FDALDQILGE-------------MSVAGFGPSVNTCIEMVLGCVKANKLREG 152
Query: 213 ------MAKSVFDEMLSTY--------------------------GVAPDTYTFNILIRG 240
M K F S Y G P + F LIRG
Sbjct: 153 YDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212
Query: 241 FCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLN 300
F K VD +M S + D DIV YN +D + GKV A + ++ L
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI--EANGLK 270
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
PD V+YT+++ C +DEA+ +FE + P YNT+I G K D+ +
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
LE G P N ++ G ++EALKVFE+M + P+ +TY++L+ LC
Sbjct: 331 LERQRAKGSI-PSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLC 388
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL-MK 479
G + A +L D + K G+ P V M LCK+ K +A F ++ K
Sbjct: 389 RAGKLDTAFELRDSMQKAGLF-------PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 480 RGTQDPTSYKILIIG--------------------HCK---------------EGTFEAG 504
T D ++ LI G C+ G E G
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 505 YELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
+++ M+ +N PD ++ + +D + + GEP +++ VP ++ ++ G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 565 LLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSN----GLRDKGFRIVGLLYDNG 620
L+K G+A+E+ L + E Q L T ++ G +K ++++ + G
Sbjct: 562 LIKAGFANETYELFYSMKE----QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 621 Y---MVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAF 677
+ +V +I L++ +L EA L K +++ + +++I+G K+ ++ EA+
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 678 GLYYELVEKG 687
+ EL++KG
Sbjct: 678 LILEELMQKG 687
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 150/284 (52%), Gaps = 4/284 (1%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
R ++ LI +AG E+ +LF SMK G +N ++ K G+ N A + +E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
M T G P T+ +I G K +D+ + F++ S + ++V Y++L+DG + G
Sbjct: 613 M-KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
++ A+ +++ +++K L P++ ++ +LL + I+EALV F+ M + PN VT
Sbjct: 672 RIDEAYLILEELMQKG--LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y LI GLC+V+K +K V ++ G P T + T+++G AGN+ EA +F++
Sbjct: 730 YGILINGLCKVRKFNK-AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
PDSA Y+ ++ L + A L++E ++G+ + +
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 165/344 (47%), Gaps = 14/344 (4%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
P K F + F + +SY +++ L +A N +S+K + G V L+ R
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ--GCV-LDTRA 589
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N +I + + G ++ +L MK+ G P+VVT+ S++ L K R + A +F+E
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S + + ++ LI GF K +D+ + +++ P++ T+N+L+D + +A ++
Sbjct: 650 SKR-IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M K P+ V+Y L+ G C + ++A V ++EM +G+KP+ ++Y
Sbjct: 709 NEALVCFQSM--KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
T+I GL + I + + + + G PD+ N ++ G N +A +FE+
Sbjct: 767 TMISGLAKAGNIAEAGALFD-RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDG 446
+ + T VL+ L E+A + G +LR+ G
Sbjct: 826 RGLPIHNKTCVVLLDTLHKNDCLEQAAIV-------GAVLRETG 862
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 188/362 (51%), Gaps = 14/362 (3%)
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
SL+ + + FQE+V L SM G P+VV +N+++ L K N A VF M
Sbjct: 683 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM-EK 741
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G+ D T+N LI G + D R + M DP+++ + L+D + G +
Sbjct: 742 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 801
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A N+ K M+++S + P+V +Y +L+ G+C+ + +A +F+ MV KG P+ VTYNTL
Sbjct: 802 ARNLYKEMIRRS--VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 859
Query: 345 IKGLCEVQKI-DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
I G C+ +++ D +K E + G D T NTL++G+C AG LN A KVF +M++
Sbjct: 860 ITGFCKSKRVEDGMKLFCEMTYQ--GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 917
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
V PD TY++L+ LC+ G E+A + ++L K + + + Y + Q LC+
Sbjct: 918 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD-------IITYNIIIQGLCR 970
Query: 464 NGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
K +A FR L ++G + D +Y +I G C++G +L M F P I
Sbjct: 971 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1030
Query: 523 YQ 524
Y
Sbjct: 1031 YD 1032
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 194/393 (49%), Gaps = 15/393 (3%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
G +H+ S+ +++ R L+ A + L + + + F SL+ +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVT---FGSLLHGFCLVNRI 157
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
++ L M G P+VV +N+L+ L K G N+A + +EM G+ D T+N
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNT 216
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
L+ G C + D R + M + +PD+VT+ L+D + G + A + K M++ S
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
D P+ V+Y +++ G CM + +A F+ M KG PN VTYNTLI G C+ + +D+
Sbjct: 277 VD--PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
++ + + GF+ D T NTL++G+C G L AL +F M+ +V PD T+ +L+
Sbjct: 335 GMKLFQ-RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
LC G+ E A +D+ +R+ + AY M LCK K KA F +
Sbjct: 394 HGLCVNGEIESALVKFDD-------MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 477 LMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELL 508
L G + D +Y I+I+G CK G EL+
Sbjct: 447 LPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 208/453 (45%), Gaps = 16/453 (3%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLIL--LKRGRTNMAKSVFDEMLSTYGVAPDTYT 233
F+++ LF M PS+V F LL L+R T + F + + YG++ D Y+
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI---YFSQKMELYGISHDLYS 108
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
F ILI FC+ S + KM +P IVT+ +L+ G C ++ A ++V MV
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
K + P+VV Y TL+ G C ++ AL + EM KGL + VTYNTL+ GLC +
Sbjct: 169 KSGYE--PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
+L ++ +PD T L++ GNL+EA +++++M++ V P++ TY+
Sbjct: 227 WSDAARMLRDMMK-RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERG 473
++ LC G A+K +D + KG P V Y ++ CK + +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCF-------PNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 474 FRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ 532
F+++ G D +Y LI G+C+ G ++ M+ R PD + L+ GL
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 533 KGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTL 592
GE A M +S ++ ++ GL K ++ L L ++ +
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 593 STHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM 625
T + L NG R + ++ + + G + M
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGIICQM 491
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 206/448 (45%), Gaps = 12/448 (2%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
F ++ LF M PS+V F +L ++ K + ++ ++ +M G++ D Y+F
Sbjct: 589 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFT 647
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
ILI FC+ S + KM P IVT +L++G C+ + + A ++V M
Sbjct: 648 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM--D 705
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
P+VV Y T++ G C ++++ AL VF M KG++ +AVTYNTLI GL +
Sbjct: 706 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 765
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+L ++ P+ L++ GNL EA ++++M+ V P+ TY+ L
Sbjct: 766 DAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 824
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ C G A+ ++D ++ KG P V Y ++ CK+ + + F
Sbjct: 825 INGFCIHGCLGDAKYMFDLMVSKGCF-------PDVVTYNTLITGFCKSKRVEDGMKLFC 877
Query: 476 QLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
++ +G D +Y LI G+C+ G ++ M+ PD Y L+D L G
Sbjct: 878 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 937
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
+ A ++ + KS + T++ I+ GL + E+ L L ++ +
Sbjct: 938 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 997
Query: 595 HTVRLLFSNGLRDKGFRIVGLLYDNGYM 622
+ L GL+ + ++ + ++G+M
Sbjct: 998 TMISGLCRKGLQREADKLCRRMKEDGFM 1025
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 146/633 (23%), Positives = 283/633 (44%), Gaps = 52/633 (8%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
G+ N Y +++ L + LN+A L +++K G + +N+L+ +G +
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT---YNTLLTGLCYSGRW 227
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
++ ++ M ++P VVTF +L+ + +K+G + A+ ++ EM+ + V P+ T+N
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNS 286
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
+I G C + + D + F M+S C P++VTYNTL+ G C+ V + + M
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM--SC 344
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID- 355
E N D+ +Y TL+ GYC + AL +F MV + + P+ +T+ L+ GLC +I+
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 356 ---KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
K ++ E +G N +++G C A + +A ++F ++ V+PD+ TY
Sbjct: 405 ALVKFDDMRESEKYIG-----IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTS-KAE 471
++++ LC G A++L + ++GI+ + + + + S N + S +
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSS------SNKEISLGSA 513
Query: 472 RGFRQLMKRGTQDPTSYKILI---IGHCKEGTFEAGYELLVLMLRRNFDPDSEI------ 522
+ R++ +R +P + LI +G Y L+L R +P++ +
Sbjct: 514 QSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHY----LLLERGNNPETSLSRSFSG 569
Query: 523 ------YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESAS 576
Y+ + L + A+ +ML+S +P+ F +L + K
Sbjct: 570 ASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKM----NKFD 625
Query: 577 LVVLLLEGKIRQNVTLSTHTVRLLFSNGLR----DKGFRIVGLLYDNGY---MVDMKELI 629
+V+ L ++ ++ +L R ++G + G+ +V + L+
Sbjct: 626 IVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 685
Query: 630 IFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNH 689
Q + EA L+ ++ + NTVI GLCK + L+ A ++Y + +KG
Sbjct: 686 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 745
Query: 690 QPLSCLENLRVALEAGGRSKEVEFLSKRMPNEK 722
L L GR + L + M K
Sbjct: 746 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 778
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 155/298 (52%), Gaps = 9/298 (3%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRA-RNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
AL+ N + + G + +Y +L L + R + AR +KR N V F
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT----FT 250
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+LI + + G E+ +L+ M V P+ VT+NS++ L GR AK FD M S
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P+ T+N LI GFCK MVD+G + FQ+MS + DI TYNTL+ G C+ GK++
Sbjct: 311 -GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A ++ MV S + PD++++ LL G C+ I+ ALV F++M + V YN +
Sbjct: 370 ALDIFCWMV--SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
I GLC+ K++K E+ L V G PD T ++ G C G EA ++ +M E
Sbjct: 428 IHGLCKADKVEKAWELF-CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 162/318 (50%), Gaps = 13/318 (4%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRA-RNLNVARNFLFSIKRKSNGTVKLEDRF 162
+ AL+ F + + G + +Y ++ L + R + AR +KRK + V F
Sbjct: 730 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI----F 785
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F +LI ++ + G E+ L+ M V P+V T+NSL+ G AK +FD M+
Sbjct: 786 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 845
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S G PD T+N LI GFCK+ V+DG + F +M+ D TYNTL+ G C+AGK+
Sbjct: 846 SK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 904
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A V MV ++PD+V+Y LL C I++ALV+ E++ + + +TYN
Sbjct: 905 NVAQKVFNRMVDCG--VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 962
Query: 343 TLIKGLCEVQKIDKIKEV--LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+I+GLC + DK+KE L +L G PD T+++G C G EA K+ +M
Sbjct: 963 IIIQGLC---RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 1019
Query: 401 MEWKVQPDSATYSVLVRN 418
E P Y +R+
Sbjct: 1020 KEDGFMPSERIYDETLRD 1037
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 161/366 (43%), Gaps = 46/366 (12%)
Query: 240 GFCKNSMVDDGFRFF-----------------------------------QKMSSFNCDP 264
GF + +D F F QKM +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
D+ ++ L+ CR ++ A +V+ M+K + P +V++ +LL G+C+ I +A
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE--PSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+ MV G +PN V YNTLI GLC+ +++ E+L +E G D T NTL+ G
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN-EMEKKGLGADVVTYNTLLTGL 221
Query: 385 CNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
C +G ++A ++ MM+ + PD T++ L+ G+ + A++LY E+++ +
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV---- 277
Query: 445 DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEA 503
P Y S+ LC +G+ A++ F + +G + +Y LI G CK +
Sbjct: 278 ---DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
G +L M F+ D Y +LI G Q G+ +A M+ + P T +L
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 564 GLLKKG 569
GL G
Sbjct: 395 GLCVNG 400
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 158/680 (23%), Positives = 261/680 (38%), Gaps = 132/680 (19%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM- 221
+N+LI Y + G + ++ +F M S V+P ++T LL L G A FD+M
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 222 ---------------------------------LSTYGVAPDTYTFNILIRGFCKNSMVD 248
L GV PD T+ I+I G CKN
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 249 DGFRFFQKM------SSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV-------------- 288
+ ++M N + D + ++ + G ++ +
Sbjct: 474 EADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLGSAQSLREIWERSKSNPFWMQRL 533
Query: 289 --------VKGMVKKSEDL-----NPDVV------------SYTTLLRG--YCMKQNIDE 321
VKG V++ L NP+ Y LR +C+K D+
Sbjct: 534 IPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIK--FDD 591
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLM 381
A +F EM+ P+ V + ++ + ++ K D I L +E G S D + L+
Sbjct: 592 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFD-IVIYLYHKMENLGISHDLYSFTILI 650
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
+ C L+ AL + KMM+ +P T L+ C F+ A L D + G +
Sbjct: 651 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 710
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGT 500
P V Y ++ LCKN + A F + K+G + D +Y LI G G
Sbjct: 711 -------PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 763
Query: 501 FEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHS 560
+ LL M++R DP+ + +LID +++G L A ++M++ S+VP T++S
Sbjct: 764 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 823
Query: 561 ILAGLLKKGYAHESASLVVLLL-EGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDN 619
++ G G ++ + L++ +G VT +T S + D G ++ +
Sbjct: 824 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED-GMKLFCEMTYQ 882
Query: 620 GYMVDM---KELIIFLSQSRKLLEANK------------------LLLFCL--------- 649
G + D LI Q+ KL A K +LL CL
Sbjct: 883 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 942
Query: 650 --------EKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVA 701
+ ++DI N +I+GLC+ KL EA+ L+ L KG +
Sbjct: 943 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 1002
Query: 702 LEAGGRSKEVEFLSKRMPNE 721
L G +E + L +RM +
Sbjct: 1003 LCRKGLQREADKLCRRMKED 1022
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 107/239 (44%), Gaps = 4/239 (1%)
Query: 453 AYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP-TSYKILIIGHCKEGTFEAGYELLVLM 511
++ + C+ + S A ++MK G + ++ L+ G C + L++LM
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
++ ++P+ +Y +LIDGL + GE +A + L +M K + T++++L GL G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 572 HESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY---MVDMKEL 628
++A ++ +++ I +V T + + G D+ + + + V +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 629 IIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
I L +L +A K K ++ NT+I G CK + + E L+ + +G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 207/385 (53%), Gaps = 15/385 (3%)
Query: 113 LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGR 172
L + GF+ N Y +++ + + A++ F + + G V E R + LI +
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL--GLVANE-RTYTVLINGLFK 245
Query: 173 AGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTY 232
G+ ++ +++ M+ GV P++ T+N ++ L K GRT A VFDEM GV+ +
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER-GVSCNIV 304
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
T+N LI G C+ +++ + +M S +P+++TYNTL+DG C GK+ A ++ + +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
KS L+P +V+Y L+ G+C K + A + +EM ++G+KP+ VTY LI
Sbjct: 365 --KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
++K + L ++E G PD T + L++G C G +NEA ++F+ M+E +P+ Y
Sbjct: 423 NMEKAIQ-LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
+ ++ C G RA KL E+ +K + P VA+Y+ M + LCK K+ +AER
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKEL-------APNVASYRYMIEVLCKERKSKEAER 534
Query: 473 GFRQLMKRGTQDPTSYKILIIGHCK 497
+++ G DP++ + +I K
Sbjct: 535 LVEKMIDSGI-DPSTSILSLISRAK 558
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 215/464 (46%), Gaps = 65/464 (14%)
Query: 155 TVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMA 214
T K + R + +I SY ++ S+ F M G P FN LL ++ N
Sbjct: 89 TSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQW 148
Query: 215 KSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVD 274
S F+E S V D Y+F ILI+G C+ ++ F +++ F P++V Y TL+D
Sbjct: 149 WSFFNENKSK--VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLID 206
Query: 275 GVCRAGKVKTAHN-------------------VVKGMVK--------------KSEDLNP 301
G C+ G+++ A + ++ G+ K + + + P
Sbjct: 207 GCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP 266
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
++ +Y ++ C +A VF+EM ++G+ N VTYNTLI GLC K+++ +V+
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
+ ++ G +P+ T NTL++G C G L +AL + + + P TY++LV C
Sbjct: 327 D-QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 422 IGDFERAEKLYDELLKKGI-------------LLRDD---------------GSTPLVAA 453
GD A K+ E+ ++GI R D G P V
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLML 512
Y + C G+ ++A R F+ ++++ + + Y +I+G+CKEG+ +LL M
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 513 RRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTS 556
+ P+ Y+ +I+ L ++ + A + ++KM+ S I P+TS
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 211/478 (44%), Gaps = 47/478 (9%)
Query: 212 NMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNT 271
N++ S F+EM+ G P + FN L+ +S + + FF + S D+ ++
Sbjct: 111 NLSISYFNEMVDN-GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGI 168
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSE-DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
L+ G C AG+++ + ++ +++ +E +P+VV YTTL+ G C K I++A +F EM
Sbjct: 169 LIKGCCEAGEIEKSFDL---LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
GL N TY LI GL + + E+ E E G F P+ T N +MN C G
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF-PNLYTYNCVMNQLCKDGRT 284
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+A +VF++M E V + TY+ L+ LC A K+ D++ + DG P
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-------KSDGINPN 337
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLV 509
+ Y ++ C GK KA R L RG + +Y IL+ G C++G +++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
M R P Y LID + A Q M + +VP T+ ++ G KG
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 570 YAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELI 629
+E++ L ++E N + + G +R + LL + ++ KEL
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG---SSYRALKLLKE----MEEKELA 510
Query: 630 IFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
++ R ++E LCK +K EA L ++++ G
Sbjct: 511 PNVASYRYMIEV-------------------------LCKERKSKEAERLVEKMIDSG 543
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 198/451 (43%), Gaps = 46/451 (10%)
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN----------------------- 342
Y ++ Y Q+++ ++ F EMVD G P + +N
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 343 -----------TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
LIKG CE +I+K ++L E G FSP+ TL++G C G +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFG-FSPNVVIYTTLIDGCCKKGEIE 215
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
+A +F +M + + + TY+VL+ L G ++ ++Y+++ ++DG P +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM-------QEDGVFPNL 268
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVL 510
Y + LCK+G+T A + F ++ +RG + +Y LI G C+E +++
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGY 570
M +P+ Y +LIDG G+ A + + + P+ T++ +++G +KG
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 571 AHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE--- 627
+A +V + E I+ + T + + +K ++ + + G + D+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 628 LIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
LI ++ EA++L +EK+ + + NT+I G CK A L E+ EK
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 688 NHQPLSCLENLRVALEAGGRSKEVEFLSKRM 718
++ + L +SKE E L ++M
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 216/429 (50%), Gaps = 14/429 (3%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
P +A FN L + G + +Y ++ L R ++ + + + +++ NG +K +
Sbjct: 335 PQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK--NG-LKPDTIL 391
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN++I + +G +++K+F MK G P+ TFN+L+ K G+ + + D ML
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ P+ T NIL++ +C +++ + KM S+ PD+VT+NTL R G
Sbjct: 452 RDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGST 511
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
TA +++ + ++ + P+V + T++ GYC + ++EAL F M + G+ PN +N
Sbjct: 512 CTAEDMIIPRMLHNK-VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LIKG + +D + EV++ +E G PD T +TLMN + G++ +++ M+E
Sbjct: 571 SLIKGFLNINDMDGVGEVVD-LMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD +S+L + G+ E+AE++ +++ K G+ P V Y + C
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV-------RPNVVIYTQIISGWC 682
Query: 463 KNGKTSKAERGFRQLMKRGTQDP--TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
G+ KA + ++++ P T+Y+ LI G + ELL M +N P
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTR 742
Query: 521 EIYQSLIDG 529
+ Q + DG
Sbjct: 743 KTMQLIADG 751
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 220/460 (47%), Gaps = 24/460 (5%)
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
G V+ + N LI G QE+ +F ++ G PS++T+ +L+ L ++ +
Sbjct: 317 GDVRSRTKLMNGLIER----GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS 372
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
S+ + + G+ PDT FN +I ++ +D + F+KM C P T+NTL+
Sbjct: 373 LLSLISK-VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLI 431
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
G + GK++ + ++ M+ + E L P+ + L++ +C ++ I+EA + +M G
Sbjct: 432 KGYGKIGKLEESSRLLD-MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG 490
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+KP+ VT+NTL K + ++++ + P+ T T++NG+C G + EA
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
L+ F +M E V P+ ++ L++ +I D + ++ D L+ + G P V
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVD-------LMEEFGVKPDVVT 603
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLML 512
+ ++ G + E + +++ G D ++ IL G+ + G E ++L M
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 513 RRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK-SSIVPTTSTFHSILAGLLKKGYA 571
+ P+ IY +I G GE A Q +KM + P +T+ +++ G G A
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF---GEA 720
Query: 572 HESASLVVLL--LEGKIRQNVTLSTHTVRLLFSNGLRDKG 609
+ LL +EGK NV + T++L+ ++G + G
Sbjct: 721 KQPWKAEELLKDMEGK---NVVPTRKTMQLI-ADGWKSIG 756
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 191/447 (42%), Gaps = 51/447 (11%)
Query: 205 LLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
L++RGR A S+F N+++++G + P
Sbjct: 329 LIERGRPQEAHSIF-------------------------NTLIEEGHK-----------P 352
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
++TY TLV + R + +++ + K L PD + + ++ N+D+A+
Sbjct: 353 SLITYTTLVTALTRQKHFHSLLSLISKVEKNG--LKPDTILFNAIINASSESGNLDQAMK 410
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+FE+M + G KP A T+NTLIKG ++ K+++ +L+ L P+ T N L+
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 385 CNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
CN + EA + KM + V+PD T++ L + IG AE D ++ + +
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE---DMIIPR---MLH 524
Query: 445 DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFE 502
+ P V ++ C+ GK +A R F ++ + G P + LI G +
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH-PNLFVFNSLIKGFLNINDMD 583
Query: 503 AGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
E++ LM PD + +L++ G+ + ML+ I P F +
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 563 AGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI----VGLLYD 618
G + G ++ ++ + + +R NV + T + S G K ++ G++
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 703
Query: 619 NGYMVDMKELIIFLSQSRKLLEANKLL 645
+ + + LI ++++ +A +LL
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELL 730
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 150/354 (42%), Gaps = 39/354 (11%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A+K F + + G ++ +++ G+ L + L + R ++ DR N
Sbjct: 407 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE--MLQPNDRTCN 464
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
L++++ +E+ + M+S GV P VVTFN+L + G T A+ + +
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLH 524
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM--------------------------- 257
V P+ T ++ G+C+ +++ RFF +M
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG 584
Query: 258 --------SSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
F PD+VT++TL++ G +K + M++ ++PD+ +++ L
Sbjct: 585 VGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG--IDPDIHAFSIL 642
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+GY ++A + +M G++PN V Y +I G C ++ K +V + + G
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
SP+ T TL+ G A +A ++ + M V P T ++ IG
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 108/244 (44%), Gaps = 6/244 (2%)
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDP-TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
L + G+ +A F L++ G + +Y L+ ++ F + L+ + + PD
Sbjct: 329 LIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPD 388
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
+ ++ ++I+ + G A + +KM +S PT STF++++ G K G ES+ L+
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSNGLR-DKGFRIVGLLYDNGYMVDMKELIIFLSQSRKL 638
++L ++ Q + + + + N + ++ + IV + G D+ ++
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 639 ----LEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSC 694
+ ++ L ++ C T++ G C+ K+ EA +Y + E G H L
Sbjct: 509 GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFV 568
Query: 695 LENL 698
+L
Sbjct: 569 FNSL 572
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 243/524 (46%), Gaps = 19/524 (3%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
K F + G N Q+Y +++++ + + AR FL + ++ K + ++
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG---FKPDVFSYS 188
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++I +AG ++++LF M GV+P V +N L+ LK A ++D +L
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
V P+ T NI+I G K VDD + +++M + D+ TY++L+ G+C AG V
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDK 308
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A +V + ++ + DVV+Y T+L G+C I E+L ++ M K N V+YN L
Sbjct: 309 AESVFNELDERKASI--DVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNIL 365
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
IKGL E KID+ + + G++ D T ++G C G +N+AL V +++
Sbjct: 366 IKGLLENGKIDEATMIWR-LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
D Y+ ++ LC E A L E+ K G+ L L+ L ++
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG-------LIRD 477
Query: 465 GKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
+ +A R++ K G + PT SY ILI G CK G F + ML + PD +
Sbjct: 478 SRLGEASFFLREMGKNGCR-PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL-AGLLKKGYAHESASLVVLL 581
Y L+ GL + + LA + + L+S + T H+IL GL G ++ +++ +
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGL-ETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM 625
N+ + F G ++ I G +Y G D+
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDI 639
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 247/542 (45%), Gaps = 56/542 (10%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
R +N+L+ ++ A + + LF ++ GV+P++ T+N L+ + K+ A+ D
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
M G PD ++++ +I K +DD F +MS PD+ YN L+DG +
Sbjct: 175 MWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
KTA + +++ S + P+V ++ ++ G +D+ L ++E M + + T
Sbjct: 234 DHKTAMELWDRLLEDSS-VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYT 292
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y++LI GLC+ +DK + V L+ S D T NT++ G C G + E+L+++ ++
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFN-ELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RI 350
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
ME K + +Y++L++ L G + A ++ + KG D +T Y
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA--DKTT-----YGIFIHG 403
Query: 461 LCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
LC NG +KA +++ G D +Y +I CK+ E L+ M + + +
Sbjct: 404 LCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
S + +LI GL++ A L++M K+ PT +++ ++ GL K G E+++ V
Sbjct: 464 SHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVK 523
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE---LIIFLSQSR 636
+LE NG+ D+K L+ L + R
Sbjct: 524 EMLE-----------------------------------NGWKPDLKTYSILLCGLCRDR 548
Query: 637 KLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLE 696
K+ A +L L+ D+ M N +I GLC + KL +A + N + +C
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM------ANMEHRNCTA 602
Query: 697 NL 698
NL
Sbjct: 603 NL 604
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/607 (23%), Positives = 265/607 (43%), Gaps = 68/607 (11%)
Query: 95 QVLRLIKV---PSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 150
VL+L+K P A F+ + G+ H+ Y +L L R +N + I+
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
+ K ++ S+I++YG+ + +++ +F M+ +
Sbjct: 72 QE---CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREI--------------------- 107
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSM---VDDGFRFFQKMSSFNCDPDIV 267
+G P ++N L+ F + V+ F +F+ + P++
Sbjct: 108 --------------FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFE---TAGVAPNLQ 150
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
TYN L+ C+ + + A + M K E PDV SY+T++ +D+AL +F+
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWK--EGFKPDVFSYSTVINDLAKAGKLDDALELFD 208
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
EM ++G+ P+ YN LI G + + E+ + LE P+ T N +++G
Sbjct: 209 EMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
G +++ LK++E+M + + + D TYS L+ LC G+ ++AE +++EL ++ +
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER-------KA 321
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYEL 507
+ V Y +M C+ GK ++ +R + + + + SY ILI G + G + +
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMI 381
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
LM + + D Y I GL G A +Q++ S + SI+ L K
Sbjct: 382 WRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCK 441
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG-------FRIVGLLYDNG 620
K E+++LV + + V L++H L +RD R +G
Sbjct: 442 KKRLEEASNLV----KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 621 YMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLY 680
+V LI L ++ K EA+ + LE D+ + ++ GLC+ +K+ A L+
Sbjct: 498 TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELW 557
Query: 681 YELVEKG 687
++ ++ G
Sbjct: 558 HQFLQSG 564
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 139/268 (51%), Gaps = 4/268 (1%)
Query: 174 GLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYT 233
G +++ + ++S G V + S++ L K+ R A ++ EM S +GV +++
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVELNSHV 466
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
N LI G ++S + + F ++M C P +V+YN L+ G+C+AGK A VK M+
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
+ PD+ +Y+ LL G C + ID AL ++ + + GL+ + + +N LI GLC V K
Sbjct: 527 ENG--WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
+D V+ +E + + T NTLM G G+ N A ++ M + +QPD +Y+
Sbjct: 585 LDDAMTVM-ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 643
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGIL 441
+++ LC A + +D+ GI
Sbjct: 644 TIMKGLCMCRGVSYAMEFFDDARNHGIF 671
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 7/283 (2%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
+KAL + G + +Y +++ L + + L A N +K S V+L
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL---VKEMSKHGVELNSHVC 467
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N+LI R E+ M G P+VV++N L+ L K G+ A + EML
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G PD T++IL+ G C++ +D + + + D++ +N L+ G+C GK+
Sbjct: 528 N-GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A V+ M + + ++V+Y TL+ G+ + + A V++ M GL+P+ ++YNT
Sbjct: 587 DAMTVMANM--EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCN 386
++KGLC + + E + A G F P T N L+ N
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIF-PTVYTWNILVRAVVN 686
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 169/427 (39%), Gaps = 44/427 (10%)
Query: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK-GLKPNAVTYNTLIKGLCEVQK 353
+S++ D ++++ Y D+AL VF+ M + G +P +YNTL+ E ++
Sbjct: 70 RSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQ 129
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
K+ E L E G +P+ T N L+ C +A + M + +PD +YS
Sbjct: 130 WVKV-ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYS 188
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERG 473
++ +L G + A +L+DE+ ++G+ P V Y + K A
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGV-------APDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 474 FRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
+ +L++ + P ++ I+I G K G + ++ M + + D Y SLI GL
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 532 QKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVT 591
G A ++ + T++++L G + G ES L ++E K N+
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIV 360
Query: 592 LSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEK 651
++ L NG D+ I L+ GY D IF
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF-------------------- 400
Query: 652 HHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEV 711
I GLC +++A G+ E+ G H + ++ L R +E
Sbjct: 401 ------------IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 712 EFLSKRM 718
L K M
Sbjct: 449 SNLVKEM 455
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 199/390 (51%), Gaps = 16/390 (4%)
Query: 95 QVLRLIK-VPSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS 152
QVL+ K + A +FF W ++ F H+ +SY +++EILG ++ + +FL I+ +
Sbjct: 73 QVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFL--IEARE 130
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
++ + F + R+Y RA L E+ + F M G+ P V + LL L + N
Sbjct: 131 YNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVN 190
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
A+ F + +G+ P T++IL+RG+ + + F +M NC D++ YN L
Sbjct: 191 HAQEFFGKA-KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNAL 249
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK 332
+D +C++G V + + + M + L PD S+ + YC ++ A V + M
Sbjct: 250 LDALCKSGDVDGGYKMFQEM--GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRY 307
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
L PN T+N +IK LC+ +K+D +L+ ++ G +PDT T N++M HC+ +N
Sbjct: 308 DLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA-NPDTWTYNSIMAYHCDHCEVNR 366
Query: 393 ALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVA 452
A K+ +M K PD TY+++++ L IG F+RA ++++ + ++ P VA
Sbjct: 367 ATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY-------PTVA 419
Query: 453 AYKSMFQFLC-KNGKTSKAERGFRQLMKRG 481
Y M L K GK +A R F ++ G
Sbjct: 420 TYTVMIHGLVRKKGKLEEACRYFEMMIDEG 449
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 172/366 (46%), Gaps = 21/366 (5%)
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
F I+ R + + ++ + R F +M F P + + L+ +C V A
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK- 198
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
K + P +Y+ L+RG+ ++ A VF+EM+++ + + YN L+ LC+
Sbjct: 199 -AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSG 257
Query: 353 KIDKIKEVLEGALEVG--GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSA 410
+D ++ + E+G G PD + ++ +C+AG+++ A KV ++M + + P+
Sbjct: 258 DVDGGYKMFQ---EMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVY 314
Query: 411 TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA 470
T++ +++ LC + A L DE+++KG + P Y S+ + C + + ++A
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKG-------ANPDTWTYNSIMAYHCDHCEVNRA 367
Query: 471 ERGFRQLMK-RGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
+ ++ + + D +Y +++ + G F+ E+ M R F P Y +I G
Sbjct: 368 TKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHG 427
Query: 530 LL-QKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQ 588
L+ +KG+ A + + M+ I P ++T + L+ G VV +L GK+ +
Sbjct: 428 LVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD-----VVDVLAGKMER 482
Query: 589 NVTLST 594
+ + S
Sbjct: 483 SSSCSV 488
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F I +Y AG + K+ MK + P+V TFN ++ L K + + A + DEM+
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT+T+N ++ C + V+ + +M C PD TYN ++ + R G+
Sbjct: 341 QK-GANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRF 399
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN-IDEALVVFEEMVDKGLKPNAVTY 341
A + +GM ++ P V +YT ++ G K+ ++EA FE M+D+G+ P + T
Sbjct: 400 DRATEIWEGMSERK--FYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTV 457
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALE 366
L L ++D + +VL G +E
Sbjct: 458 EMLRNRLVGWGQMD-VVDVLAGKME 481
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 12/258 (4%)
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
+Y+ L++ L ++ + + L A E F + + + A +EA + F +
Sbjct: 104 SYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNR 163
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M+E+ ++P L+ +LC A++ + + KG G P Y + +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK--AKGF-----GIVPSAKTYSILVR 216
Query: 460 FLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
+ S A + F ++++R D +Y L+ CK G + GY++ M P
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
D+ + I G+ AY+ L +M + +VP TF+ I+ L K +E
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK----NEKVDDA 332
Query: 579 VLLLEGKIRQNVTLSTHT 596
LLL+ I++ T T
Sbjct: 333 YLLLDEMIQKGANPDTWT 350
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/643 (25%), Positives = 291/643 (45%), Gaps = 75/643 (11%)
Query: 103 PSKALKFFNWLPQMG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKR---KSNGTVKL 158
P AL F +W+ Q + H+ SY +L +L + V +F I+ KS +V
Sbjct: 103 PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGV----VFKIRLLMIKSCDSVG- 157
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
+ + L R + F+ KL + +N+LL L + G + K V+
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLI-----------IGCYNTLLNSLARFGLVDEMKQVY 206
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
EML V P+ YT+N ++ G+CK V++ ++ K+ DPD TY +L+ G C+
Sbjct: 207 MEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVF------------ 326
+ +A V M K N V+YT L+ G C+ + IDEA+ +F
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNE--VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 327 -----------------------EEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEG 363
+EM + G+KPN TY LI LC K +K +E+L
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
LE G P+ T N L+NG+C G + +A+ V E M K+ P++ TY+ L++ C
Sbjct: 384 MLE-KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-S 441
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-T 482
+ +A + +++L++ +L P V Y S+ C++G A R + RG
Sbjct: 442 NVHKAMGVLNKMLERKVL-------PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 483 QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQT 542
D +Y +I CK E +L + ++ +P+ +Y +LIDG + G+ A+
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 543 LQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFS 602
L+KML + +P + TF++++ GL G E+ L +++ ++ V+ T + L
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 603 NGLRDKGFRIVGLLYDNGYMVDMKELIIFLS---QSRKLLEANKLLLFCLEKHHNIDIDM 659
+G D + + +G D F+ + +LL+A ++ E + D+
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 660 CNTVIEGLCKMKKLSEAFGLYYELVEKG----NHQPLSCLENL 698
+++I+G + + + AF + + + G H LS +++L
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 261/545 (47%), Gaps = 43/545 (7%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S+AL + + G N +Y ++++ L AR L + K + +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT---Y 396
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N+LI Y + G+ +++V + M+S +SP+ T+N L+ K + A V ++ML
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLE 455
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
V PD T+N LI G C++ D +R M+ PD TY +++D +C++ +V+
Sbjct: 456 R-KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A ++ + +K +NP+VV YT L+ GYC +DEA ++ E+M+ K PN++T+N
Sbjct: 515 EACDLFDSLEQKG--VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
LI GLC K+ K +LE + G P T L++ G+ + A F++M+
Sbjct: 573 LIHGLCADGKL-KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
+PD+ TY+ ++ C G AE + + +R++G +P + Y S+ +
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAK-------MRENGVSPDLFTYSSLIKGYGD 684
Query: 464 NGKTSKAERGFRQLMKRGTQDPTSYKIL-IIGHCKE-------GT------------FEA 503
G+T+ A +++ G + P+ + L +I H E G+ F+
Sbjct: 685 LGQTNFAFDVLKRMRDTGCE-PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS-SIVPTTSTFHSIL 562
ELL M+ + P+++ Y+ LI G+ + G +A + M ++ I P+ F+++L
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 563 AGLLKKGYAHESASLV-VLLLEGKIRQNVTLSTHTVRL--LFSNGLRDKGFRIVGLLYDN 619
+ K +E+A +V ++ G + Q L + V + L+ G +++G + L
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQ---LESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 620 GYMVD 624
GY D
Sbjct: 861 GYYED 865
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 203/456 (44%), Gaps = 64/456 (14%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NSLI R+G F + +L + M G+ P T+ S++ L K R A +FD L
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS-L 523
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
GV P+ + LI G+CK VD+ +KM S NC P+ +T+N L+ G+C GK+
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K A + + MVK L P V + T L+ + D A F++M+ G KP+A TY
Sbjct: 584 KEATLLEEKMVKIG--LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF----- 397
T I+ C ++ ++++ E G SPD T ++L+ G+ + G N A V
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRE-NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 398 ------------------------------------------------EKMMEWKVQPDS 409
EKM+E V P++
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760
Query: 410 ATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSK 469
+Y L+ +C +G+ AEK++D + R++G +P + ++ CK K ++
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQ------RNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 470 AERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID 528
A + ++ G S K+LI G K+G E G + +L+ + D ++ +ID
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 529 GLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
G+ ++G Y+ M K+ ++ T+ ++ G
Sbjct: 875 GVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 200/418 (47%), Gaps = 15/418 (3%)
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
Y TLL +DE V+ EM++ + PN TYN ++ G C++ +++ + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
E G PD T +L+ G+C +L+ A KVF +M + + Y+ L+ LC
Sbjct: 246 E-AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC----- 299
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-D 484
+ DE + + ++DD P V Y + + LC + + S+A +++ + G + +
Sbjct: 300 --VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 485 PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
+Y +LI C + FE ELL ML + P+ Y +LI+G ++G A ++
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 545 KMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNG 604
M + P T T++ ++ G K H++ ++ +LE K+ +V + +G
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 605 LRDKGFRIVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCN 661
D +R++ L+ D G + D +I L +S+++ EA L +K N ++ M
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 662 TVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRV-ALEAGGRSKEVEFLSKRM 718
+I+G CK K+ EA + +++ K N P S N + L A G+ KE L ++M
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 241/480 (50%), Gaps = 36/480 (7%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKS-VGVSPSVVTFNSLLLILLKRGRTNMA 214
V L + FN L+ Y G ++++ + M S V+P VT+N++L + K+GR +
Sbjct: 200 VSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDL 259
Query: 215 KSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVD 274
K + +M G+ P+ T+N L+ G+CK + + F+ + M N PD+ TYN L++
Sbjct: 260 KELLLDM-KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318
Query: 275 GVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNID-EALVVFEEMVDKG 333
G+C AG ++ ++ M KS L PDVV+Y TL+ G C + + EA + E+M + G
Sbjct: 319 GLCNAGSMREGLELMDAM--KSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDG 375
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+K N VT+N +K LC+ +K + + ++ +++ GFSPD T +TL+ + G+L+ A
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGA 435
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL----------- 442
L++ +M + ++ ++ T + ++ LC + A L + K+G ++
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 443 --RDDGS---------------TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQD 484
R++ TP V+ + S+ LC +GKT A F +L + G D
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 485 PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
+++ +I+G+CKEG E +E ++ +F PD+ L++GL ++G A
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 545 KMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNG 604
+++ V T T++++++ K E+ L+ + E + + + LL +G
Sbjct: 616 TLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG 674
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/530 (25%), Positives = 221/530 (41%), Gaps = 74/530 (13%)
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR---AGKVKTA 285
P F+I + + + FQKM P+++T NTL+ G+ R + + +A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK------------- 332
V MVK LN V ++ L+ GYC++ +++AL + E MV +
Sbjct: 189 REVFDDMVKIGVSLN--VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 333 -----------------------GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
GL PN VTYN L+ G C++ + + +++E ++
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE-LMKQTN 305
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
PD CT N L+NG CNAG++ E L++ + M K+QPD TY+ L+ +G A
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 430 KLYDELLKKGI-----------------------------LLRDDGSTPLVAAYKSMFQF 460
KL +++ G+ L+ G +P + Y ++ +
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 461 LCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
K G S A R++ ++G + + + ++ CKE + + LL +R F D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
Y +LI G ++ + A + +M K I PT STF+S++ GL G +
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLL 639
L E + + + + G +K F + + D I L+ K
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605
Query: 640 EANKLLLF--CLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
K L F L + +D NT+I CK KKL EA+ L E+ EKG
Sbjct: 606 MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 120/307 (39%), Gaps = 92/307 (29%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S AL+ + Q G N + +L+ L + R L+ A N L S ++ G + +++ +
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR--GFI-VDEVTY 489
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+LI + R +++++++ MK V ++P+V TFNSL+ L G+T +A FDE+
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 224 T----------------------------------YGVAPDTYTFNILIRGFCKNSMVDD 249
+ + PD YT NIL+ G CK M +
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609
Query: 250 GFRFFQKM---------------SSFNCD-------------------PDIVTYNTLVDG 275
FF + S+F D PD TYN+ +
Sbjct: 610 ALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 276 VCRAGKVKTAHNVVK------GMVKKS---------------EDLNPDVVSYTTLLRGYC 314
+ GK+ ++K G +K+ E+LN + ++Y+ ++ C
Sbjct: 670 LMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELC 729
Query: 315 MKQNIDE 321
+ + E
Sbjct: 730 SRGRLKE 736
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 217/462 (46%), Gaps = 22/462 (4%)
Query: 124 SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLF 183
+Y +++ + + AR F ++R FN LI Y + GLF ++ +
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS---FNPLIEGYCKQGLFDDAWGVT 331
Query: 184 TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK 243
M + G+ P+ T+N + L GR + A+ + M APD ++N L+ G+ K
Sbjct: 332 DEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-----AAPDVVSYNTLMHGYIK 386
Query: 244 NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDV 303
+ F + + + P IVTYNTL+DG+C +G ++ A + + M ++ + PDV
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT--TQLIFPDV 444
Query: 304 VSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEG 363
++YTTL++G+ N+ A V++EM+ KG+KP+ Y T G + DK + E
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
+ +PD N ++G C GNL +A++ K+ + PD TY+ ++R G
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ 483
F+ A LYDE+L+K + P V Y + K G+ +A + ++ KRG +
Sbjct: 565 QFKMARNLYDEMLRKRLY-------PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 484 -DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI--DGLLQKGEPLLAY 540
+ ++ L+ G CK G + Y L M P+ Y LI + +K E ++
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVV-- 675
Query: 541 QTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL 582
+ ++ML I P T ++ L K + E L LLL
Sbjct: 676 KLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLL 717
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 165/669 (24%), Positives = 283/669 (42%), Gaps = 91/669 (13%)
Query: 95 QVLRLIKV-PSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS 152
+VL +I+V P A +FFNW+ Q + Q++ MLEIL A N ++ +L + +
Sbjct: 90 RVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEIL--AENDLMSEAYLVAERSID 147
Query: 153 NGTVKLEDRFFNSLIRS-------------YGRAGLFQESVKLFTSMKSVGVSPSVVTFN 199
G +++D + Y + + ++ + F M G PSV N
Sbjct: 148 LGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCN 207
Query: 200 SLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSS 259
+L +L N A +V++ M+ +G+ P TFN ++ K ++ + + +M
Sbjct: 208 IVLKVLRDSRMMNKASAVYETMIE-HGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 260 FNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNI 319
N + VTYN L++G + GK++ A M + + P S+ L+ GYC +
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP--YSFNPLIEGYCKQGLF 324
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL---------------EGA 364
D+A V +EM++ G+ P TYN I LC+ +ID +E+L G
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGY 384
Query: 365 LEVGGF---------------SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDS 409
+++G F P T NTL++G C +GNL A ++ E+M + PD
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 444
Query: 410 ATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSK 469
TY+ LV+ G+ A ++YDE+L+KGI + DG AY + + G + K
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGI--KPDG-----YAYTTRAVGELRLGDSDK 497
Query: 470 AERGFRQLMKRGTQDP--TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
A R +++ P T Y + I G CK G E + R PD Y ++I
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 528 DGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIR 587
G L+ G+ +A +ML+ + P+ T+ ++ G K G ++ + + +R
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 588 QNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLF 647
NV + + G D+ +R + + + G + + +S++
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKN------------ 665
Query: 648 CLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGR 707
C +K E LY E+++K L LE
Sbjct: 666 --------------------CDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 705
Query: 708 SKEVEFLSK 716
S+EVEFL +
Sbjct: 706 SREVEFLER 714
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 224/463 (48%), Gaps = 12/463 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N LI + R ++ L M +G PS+VT +SLL R + A ++ D+M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT TF LI G ++ + +M C P++VTY +V+G+C+ G +
Sbjct: 183 EM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A N++ M ++ + +VV Y+T++ C ++ D+AL +F EM +KG++PN +TY+
Sbjct: 242 DLAFNLLNKM--EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI LC ++ +L +E +P+ T N L++ G L EA K++++M++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD TYS L+ C + A+ +++ ++ K P V Y ++ C
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-------PNVVTYNTLINGFC 411
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K + + FR++ +RG + +Y LI G + + + M+ P+
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y +L+DGL + G+ A + + +S + PT T++ ++ G+ K G + L L
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD 624
++ +V + + GL+++ + + ++G + D
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 236/547 (43%), Gaps = 77/547 (14%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
+++ LF M PS+ FN LL + K + ++ S+ ++M G++ + YT+N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYN 124
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
ILI FC+ S + KM +P IVT ++L++G C ++ A +V MV+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
PD +++TTL+ G + EA+ + + MV +G +PN VTY ++ GLC+ ID
Sbjct: 185 G--YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 356 ---KIKEVLEGA-------------------------------LEVGGFSPDTCTLNTLM 381
+ +E A +E G P+ T ++L+
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
+ CN ++A ++ M+E K+ P+ T++ L+ G AEKLYDE++K+ I
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI- 361
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGT 500
P + Y S+ C + + +A+ F ++ + + +Y LI G CK
Sbjct: 362 ------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 501 FEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHS 560
+ G EL M +R ++ Y +LI G Q + A ++M+ + P T+++
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 561 ILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNG 620
+L GL K G ++ + L K+ + + + G + G+
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD--------- 526
Query: 621 YMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLY 680
+F S S K ++ D+ + NT+I G C+ EA L+
Sbjct: 527 ---------LFCSLSLKGVKP--------------DVIIYNTMISGFCRKGLKEEADALF 563
Query: 681 YELVEKG 687
++ E G
Sbjct: 564 RKMREDG 570
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 176/359 (49%), Gaps = 12/359 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ ++ + G + L M++ + +VV +++++ L K + A ++F EM
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM- 286
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
GV P+ T++ LI C D R M +P++VT+N L+D + GK+
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M+K+S D PD+ +Y++L+ G+CM +DEA +FE M+ K PN VTYN
Sbjct: 347 VEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TLI G C+ ++ID+ E+ + G +T T TL++G A + + A VF++M+
Sbjct: 405 TLINGFCKAKRIDEGVELFR-EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V P+ TY+ L+ LC G E+A +++ L + + P + Y M + +C
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM-------EPTIYTYNIMIEGMC 516
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
K GK F L +G + D Y +I G C++G E L M PDS
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 258/574 (44%), Gaps = 23/574 (4%)
Query: 152 SNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT 211
+NG ++ ++R++ G E+V + M++ G++PS +T N +L I ++ G
Sbjct: 740 ANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLI 799
Query: 212 NMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNT 271
A++VFDEM S GV PD+ ++ +++ G ++ + + R+ M PD T
Sbjct: 800 EYAENVFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 858
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
++ +C G V A + M+ P+++++T+L+ G C K +I +A + EEMV
Sbjct: 859 ILTALCENGLVNRAIWYFRKMIDLG--FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 916
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
G KPN T+ LI GLC+ +K + + + P+ T +++ G+C LN
Sbjct: 917 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 976
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
A +F +M E + P+ TY+ L+ C G F RA +L + L+ D+G P +
Sbjct: 977 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN-------LMGDEGFMPNI 1029
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVL 510
Y + LCK + +A + G + D +Y ILI CK+
Sbjct: 1030 YTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCR 1089
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGY 570
M + F+ D + LI ++ + + + Q ++ ++PT T+ S+++ K+G
Sbjct: 1090 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG- 1148
Query: 571 AHESASLVVLLLEGKIRQNVTLSTHTVRLLFSN----GLRDKGFRIVGLLYDNGYM-VDM 625
L + R + T L S + D+ ++ + D G ++
Sbjct: 1149 ---DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEV 1205
Query: 626 KELIIFLSQSRKLLEANKLLLF-CLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELV 684
+ + ++ AN ++L L+K + I T++ LC KK+ A + +L+
Sbjct: 1206 TRVTLAYEYCKRNDSANAMILLEPLDK--KLWIRTVRTLVRKLCSEKKVGVAALFFQKLL 1263
Query: 685 EKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRM 718
EK + L A G++ V L++R+
Sbjct: 1264 EKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 1297
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 243/530 (45%), Gaps = 45/530 (8%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN L + + ++ + L M+S G++ S+ T + ++ + + + A S +++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT FN L+ G C V + +M P ++T NTLV+G+C GKV
Sbjct: 151 K-LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A ++ MV+ P+ V+Y +L C A+ + +M ++ +K +AV Y+
Sbjct: 210 SDAVVLIDRMVETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+I GLC+ +D + +E+ GF D T NTL+ G CNAG ++ K+ M++
Sbjct: 268 IIIDGLCKDGSLDNAFNLF-NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
K+ P+ T+SVL+ + G A++L E++++GI P Y S+ C
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI-------APNTITYNSLIDGFC 379
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K + +A + ++ +G D ++ ILI G+CK + G EL M R ++
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y +L+ G Q G+ +A + Q+M+ + P ++ +L GL G ++ +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF--- 496
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEA 641
GKI ++ ++ G+ YM+ +I + + K+ +A
Sbjct: 497 --GKIEKS--------KMELDIGI---------------YMI----IIHGMCNASKVDDA 527
Query: 642 NKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQP 691
L K +D N +I LC+ LS+A L+ ++ E+G H P
Sbjct: 528 WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG-HAP 576
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 217/433 (50%), Gaps = 16/433 (3%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S A+ + + + GF N+ +Y +L ++ ++ +A L ++ ++ +KL+ +
Sbjct: 210 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN---IKLDAVKY 266
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+ +I + G + LF M+ G ++T+N+L+ GR + + +M+
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
++P+ TF++LI F K + + + ++M P+ +TYN+L+DG C+ +++
Sbjct: 327 R-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A +V M+ K D PD++++ L+ GYC ID+ L +F EM +G+ N VTYNT
Sbjct: 386 EAIQMVDLMISKGCD--PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L++G C+ K++ K++ + + PD + L++G C+ G L +AL++F K+ +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVS-RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
K++ D Y +++ +C+ + A L+ L KG+ L AY M LC+
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD-------ARAYNIMISELCR 555
Query: 464 NGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
SKA+ FR++ + G D +Y ILI H + EL+ M F D
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Query: 523 YQSLIDGLLQKGE 535
+ +I+ +L GE
Sbjct: 616 VKMVIN-MLSSGE 627
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 171/408 (41%), Gaps = 51/408 (12%)
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE----------------- 362
D+A+ +F +M+ P + +N L + + ++ + + + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 363 -----------------GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
G + G+ PDT NTL+NG C ++EAL++ ++M+E
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
+P T + LV LC G A L D +++ G P Y + +CK+G
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF-------QPNEVTYGPVLNVMCKSG 242
Query: 466 KTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
+T+ A R++ +R + D Y I+I G CK+G+ + + L M + F D Y
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEG 584
+LI G G + L+ M+K I P TF ++ +K+G E+ L+ +++
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 585 KIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANK- 643
I N + ++ ++V L+ G D+ I ++ K AN+
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK---ANRI 419
Query: 644 ---LLLFCLEKHHNIDIDMC--NTVIEGLCKMKKLSEAFGLYYELVEK 686
L LF + + NT+++G C+ KL A L+ E+V +
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 211/448 (47%), Gaps = 12/448 (2%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
F +++ LFT M PS++ F LL ++ K R ++ S+F++M G+ P T N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCN 122
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
I++ C +S F KM +PD+VT+ +L++G C +++ A + ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
P+VV+YTTL+R C ++++ A+ +F +M G +PN VTYN L+ GLCE+ +
Sbjct: 183 G--FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+L ++ P+ T L++ G L EA +++ M++ V PD TY L
Sbjct: 241 DAAWLLRDMMK-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ LC G + A +++ L+ +G P Y ++ CK+ + + F
Sbjct: 300 INGLCMYGLLDEARQMF-------YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 476 QLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
++ ++G + +Y +LI G+C G + E+ M R PD Y L+DGL G
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
+ A + M K + T+ I+ G+ K G ++ L L ++ NV T
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 595 HTVRLLFSNGLRDKGFRIVGLLYDNGYM 622
+ GL + + + ++G++
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 177/364 (48%), Gaps = 14/364 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F SL+ Y ++++ LF + +G P+VVT+ +L+ L K N A +F++M
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM- 214
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
T G P+ T+N L+ G C+ D + M +P+++T+ L+D + GK+
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M++ S + PDV +Y +L+ G CM +DEA +F M G PN V Y
Sbjct: 275 MEAKELYNVMIQMS--VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYT 332
Query: 343 TLIKGLCEVQKI-DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
TLI G C+ +++ D +K E + G +T T L+ G+C G + A +VF +M
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYE--MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ PD TY+VL+ LC G E+A +++ + K+ + + + Y + Q +
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN-------IVTYTIIIQGM 443
Query: 462 CKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
CK GK A F L +G + + +Y +I G C+ G L M F P+
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Query: 521 EIYQ 524
+Y+
Sbjct: 504 SVYK 507
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 171/350 (48%), Gaps = 14/350 (4%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A+ F+ + MGF N +Y ++ L + R+LN A LF+ + +NG+ + +N+
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE-LFN-QMGTNGS-RPNVVTYNA 228
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
L+ G + ++ L M + P+V+TF +L+ +K G+ AK +++ M+
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM- 287
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
V PD +T+ LI G C ++D+ + F M C P+ V Y TL+ G C++ +V+
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
+ M +K N ++YT L++GYC+ D A VF +M + P+ TYN L+
Sbjct: 348 MKIFYEMSQKGVVAN--TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
GLC K++K + E + + T ++ G C G + +A +F + +
Sbjct: 406 DGLCCNGKVEKALMIFE-YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
+P+ TY+ ++ C G A D L KK +++DG P + YK
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEA----DSLFKK---MKEDGFLPNESVYK 507
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 188/431 (43%), Gaps = 18/431 (4%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P ++ +T LL D + +FE+M G+ P T N ++ +C + +
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
L +++G F PD T +L+NG+C+ + +A+ +F++++ +P+ TY+ L+R LC
Sbjct: 141 LGKMMKLG-FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
A +L++++ +GS P V Y ++ LC+ G+ A R +MKR
Sbjct: 200 KNRHLNHAVELFNQM-------GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 481 GTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
+ + ++ LI K G EL +M++ + PD Y SLI+GL G A
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 540 YQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRL 599
Q M ++ P + +++ G K + + + + + N T ++
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 600 LFSNGLRDKGFRIVGLLYDNGYMVDMKE---LIIFLSQSRKLLEANKLLLFCLEKHHNID 656
G D + + D++ L+ L + K+ +A + + ++ +I+
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 657 IDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSK 716
I +I+G+CK+ K+ +AF L+ L KG + + G E + L K
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 717 RM------PNE 721
+M PNE
Sbjct: 493 KMKEDGFLPNE 503
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 6/237 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A + +N + QM + +Y ++ L L+ AR + ++R NG + +
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER--NGCYP-NEVIYT 332
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+LI + ++ ++ +K+F M GV + +T+ L+ GR ++A+ VF++M S+
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM-SS 391
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
PD T+N+L+ G C N V+ F+ M D +IVTY ++ G+C+ GKV+
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
A ++ + K + P+V++YTT++ G+C + I EA +F++M + G PN Y
Sbjct: 452 AFDLFCSLFSKG--MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 165/693 (23%), Positives = 302/693 (43%), Gaps = 97/693 (13%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
+FF W + + +S+ L++++L ++ L +K +G V ++ F
Sbjct: 76 GFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELK---SGGVSVDSYCFCV 132
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILL------------------- 206
LI +Y + G+ +++V+ F MK P V T+N +L +++
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 207 -----------------KRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
K+GRT+ A+ +FD+M + G++P+ T+ ILI G C+ DD
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM-TGRGISPNRVTYTILISGLCQRGSADD 251
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
+ F +M + PD V +N L+DG C+ G++ A +++ K L + Y++L
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG--LRGYSSL 309
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+ G + +A ++ M+ K +KP+ + Y LI+GL + KI+ ++L ++ G
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL-SSMPSKG 368
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
SPDT N ++ C G L E + +M E + PD+ T+++L+ ++C G AE
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE------------------ 471
+++ E+ K G +P VA + ++ LCK+G+ +A
Sbjct: 429 EIFTEIEKS-------GCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 472 -----RGFRQLMKRG-----------------TQDPTSYKILIIGHCKEGTFEAGYELLV 509
R F +++ G + D SY +LI G C+ G + +LL
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
++ + PDS Y +LI+GL + G A++ K + + + S++ +K
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRKR 599
Query: 570 YAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLL---YDNGYMVDMK 626
+ +L + L+ KI + + + F G ++ R + L D +
Sbjct: 600 KVLVAFNLWMKYLK-KISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYT 658
Query: 627 ELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLY-YELVE 685
+I L QS + EA + EK + C +I GLCK ++L A ++ Y L
Sbjct: 659 IWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDN 718
Query: 686 KGNHQPLSCLENLRVALEAGGRSKEVEFLSKRM 718
P C L LE+ + + V L+ RM
Sbjct: 719 NFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRM 751
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 192/409 (46%), Gaps = 34/409 (8%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A + + GF + Y +++ L RAR A ++ +K+ +K + +
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN---IKPDIILYT 342
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI+ +AG ++++KL +SM S G+SP +N+++ L RG +S+ EM T
Sbjct: 343 ILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET 402
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
PD T ILI C+N +V + F ++ C P + T+N L+DG+C++G++K
Sbjct: 403 ESF-PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKE 461
Query: 285 AHNVVKGM-VKKSEDL-----NPDVVSYTTLLR-GYCMKQNIDEALVVFEEMVDKGLKPN 337
A ++ M V + L + S+ T++ G +K D A D G P+
Sbjct: 462 ARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLA-----HFADTGSSPD 516
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
V+YN LI G C ID ++L L++ G SPD+ T NTL+NG G EA K+F
Sbjct: 517 IVSYNVLINGFCRAGDIDGALKLL-NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
+++ P A Y L+ C A L+ + LKK L D+ + + +
Sbjct: 576 YAKDDFRHSP--AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF--- 630
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQDPT----SYKILIIGHCKEGTFE 502
K G+T ER R+L++ T+ Y I +IG C+ G F
Sbjct: 631 -----KEGET---ERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFH 671
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 218/466 (46%), Gaps = 63/466 (13%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL-----FSIKRKSNGTVKLED 160
A F+ + +M N ++ +M+ +L + L A+ FL F IK T+
Sbjct: 209 AWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIK----PTIVT-- 262
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
+N+L++ + G + + + + MKS G P + T+N +L + GR A V E
Sbjct: 263 --YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLRE 317
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
M G+ PD+ ++NILIRG N ++ F + +M P TYNTL+ G+
Sbjct: 318 M-KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN 376
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
K++ A +++ + +K L D V+Y L+ GYC + +A + +EM+ G++P T
Sbjct: 377 KIEAAEILIREIREKGIVL--DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVG-GFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
Y +LI LC K + E+ E VG G PD +NTLM+GHC GN++ A + ++
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKV--VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M + PD TY+ L+R LC G FE A +L E+ ++GI P +Y ++
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI-------KPDHISYNTL-- 543
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
I G+ K+G + + + ML F+P
Sbjct: 544 --------------------------------ISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
Y +L+ GL + E LA + L++M IVP S+F S++ +
Sbjct: 572 LLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 197/405 (48%), Gaps = 15/405 (3%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N ++ R + + + M + + +V TFN ++ +L K G+ AK F ++
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKG-FLGIME 252
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+G+ P T+N L++GF ++ +M S PD+ TYN ++ +C G+
Sbjct: 253 VFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR-- 310
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A V++ M K L PD VSY L+RG +++ A +EMV +G+ P TYNT
Sbjct: 311 -ASEVLREM--KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNT 367
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
LI GL KI+ E+L + G D+ T N L+NG+C G+ +A + ++MM
Sbjct: 368 LIHGLFMENKIEA-AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
+QP TY+ L+ LC A++L+++++ KG+ P + ++ C
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM-------KPDLVMMNTLMDGHCA 479
Query: 464 NGKTSKAERGFRQL-MKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
G +A +++ M D +Y L+ G C EG FE EL+ M RR PD
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
Y +LI G +KG+ A+ +ML PT T++++L GL K
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK 584
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 224/490 (45%), Gaps = 32/490 (6%)
Query: 96 VLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL--------FS 147
+L L+K P+ A F N + + + Q+ L + ++ + + L S
Sbjct: 78 LLSLVKTPNLAFNFVNHIDL--YRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNS 135
Query: 148 IKRKSNGTVKLEDRF-------FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNS 200
I+ + V DR F+ L+R + + E+++ F MK G P T N
Sbjct: 136 IRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNH 195
Query: 201 LLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSF 260
+L +L + R A + +M + + YTFNI+I CK + F M F
Sbjct: 196 ILTLLSRLNRIENAWVFYADMYRM-EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF 254
Query: 261 NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNID 320
P IVTYNTLV G G+++ A ++ M KS+ PD+ +Y +L C N
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEM--KSKGFQPDMQTYNPILSWMC---NEG 309
Query: 321 EALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTL 380
A V EM + GL P++V+YN LI+G C ++ + G P T NTL
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILIRG-CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 381 MNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
++G + A + ++ E + DS TY++L+ C GD ++A L+DE++
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT--- 425
Query: 441 LLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEG 499
DG P Y S+ LC+ KT +A+ F +++ +G + D L+ GHC G
Sbjct: 426 ----DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 500 TFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFH 559
+ + LL M + +PD Y L+ GL +G+ A + + +M + I P +++
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 560 SILAGLLKKG 569
++++G KKG
Sbjct: 542 TLISGYSKKG 551
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 149/295 (50%), Gaps = 4/295 (1%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N LIR G + + M G+ P+ T+N+L+ L + A+ + E +
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE-I 388
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ D+ T+NILI G+C++ F +M + P TY +L+ +CR K
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ A + + +V K + PD+V TL+ G+C N+D A + +EM + P+ VTYN
Sbjct: 449 READELFEKVVGKG--MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYN 506
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L++GLC K ++ +E++ G ++ G PD + NTL++G+ G+ A V ++M+
Sbjct: 507 CLMRGLCGEGKFEEARELM-GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
P TY+ L++ L + E AE+L E+ +GI+ D ++ A ++
Sbjct: 566 LGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 171/388 (44%), Gaps = 52/388 (13%)
Query: 192 SPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG--VAPDTYTFNILIRGFCKNSMVDD 249
SP VT LL + R N +++FDE++ + T F++L+R C+ MVD+
Sbjct: 117 SPKPVT---QLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDE 173
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
F M P T N ++ + R +++ A M + ++ +V ++ +
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRM--EIKSNVYTFNIM 231
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+ C + + +A M G+KP VTYNTL++G +I+ + ++ ++ G
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII-SEMKSKG 290
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
F PD T N +++ CN G +E L+ +M E + PDS +Y++L+R + GD E A
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYK 489
DE++K+G++ P Y ++ L K AE R++ ++G
Sbjct: 348 AYRDEMVKQGMV-------PTFYTYNTLIHGLFMENKIEAAEILIREIREKG-------- 392
Query: 490 ILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS 549
+VL DS Y LI+G Q G+ A+ +M+
Sbjct: 393 ------------------IVL--------DSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 550 SIVPTTSTFHSILAGLLKKGYAHESASL 577
I PT T+ S++ L +K E+ L
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADEL 454
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 195/396 (49%), Gaps = 15/396 (3%)
Query: 186 MKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNS 245
M +G P +VTF SL+ R A S+ ++M+ G+ PD + +I CKN
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM-GIKPDVVMYTTIIDSLCKNG 191
Query: 246 MVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVS 305
V+ F +M ++ PD+V Y +LV+G+C +G+ + A ++++GM K+ + PDV++
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK--IKPDVIT 249
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
+ L+ + + +A ++ EM+ + PN TY +LI G C +D+ +++ +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY-LM 308
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
E G PD +L+NG C +++A+K+F +M + + ++ TY+ L++ +G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG---- 481
A++++ ++ +G+ P + Y + LC NGK KA F + KR
Sbjct: 369 NVAQEVFSHMVSRGV-------PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 482 TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQ 541
+ +Y +L+ G C G E + M +R D Y +I G+ + G+ A
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 542 TLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
+ + P T+ ++++GL ++G HE+ L
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 196/398 (49%), Gaps = 15/398 (3%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
F E++ LFT M PS++ F LL ++ K + ++ ++ D L GV+ D YT N
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH-LQIMGVSHDLYTCN 111
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
+L+ FC++S F KM +PDIVT+ +L++G C +++ A ++V MV+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
+ PDVV YTT++ C +++ AL +F++M + G++P+ V Y +L+ GLC +
Sbjct: 172 G--IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+L G + PD T N L++ G +A +++ +M+ + P+ TY+ L
Sbjct: 230 DADSLLRGMTK-RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ C G + A +++ L+ G P V AY S+ CK K A + F
Sbjct: 289 INGFCMEGCVDEARQMF-------YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 476 QLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
++ ++G T + +Y LI G + G E+ M+ R P+ Y L+ L G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 535 ---EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
+ L+ ++ +QK + P T++ +L GL G
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 208/445 (46%), Gaps = 55/445 (12%)
Query: 98 RLIKVPSKALKF------FNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRK 151
+L+ V +K KF + L MG +H+ + L++ ++ +A +FL + +
Sbjct: 77 KLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL 136
Query: 152 SNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT 211
+ + F SLI + +E++ + M +G+ P VV + +++ L K G
Sbjct: 137 G---FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 212 NMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNT 271
N A S+FD+M YG+ PD + L+ G C + D + M+ PD++T+N
Sbjct: 194 NYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLN------------------------------- 300
L+D + GK A + M++ S N
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 301 --PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
PDVV+YT+L+ G+C + +D+A+ +F EM KGL N +TY TLI+G +V K + +
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK---VQPDSATYSVL 415
EV + G P+ T N L++ C G + +AL +FE M + + V P+ TY+VL
Sbjct: 373 EVFSHMVS-RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ LC+ G E+A +++++ K+ + + Y + Q +CK GK A F
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREM-------DIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 476 QLMKRGTQ-DPTSYKILIIGHCKEG 499
L +G + + +Y +I G +EG
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREG 509
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 173/373 (46%), Gaps = 43/373 (11%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A+ N + +MG + Y +++ L + ++N A + + N ++ + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF---DQMENYGIRPDVVMYT 216
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
SL+ +G ++++ L M + P V+TFN+L+ +K G+ A+ +++EM+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+AP+ +T+ LI GFC VD+ + F M + C PD+V Y +L++G C+ KV
Sbjct: 277 -SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + M +K L + ++YTTL++G+ + A VF MV +G+ PN TYN L
Sbjct: 336 AMKIFYEMSQKG--LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 345 IKGLCEVQKIDKIKEVLEGAL--EVGGFSPDTCTLNTLMNG------------------- 383
+ LC K+ K + E E+ G +P+ T N L++G
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 384 ----------------HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
C AG + A+ +F + V+P+ TY+ ++ L G
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 428 AEKLYDELLKKGI 440
A L+ ++ + G+
Sbjct: 514 AHVLFRKMKEDGV 526
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGA 364
+Y +LR +EAL +F MV+ P+ + + L+ + +++K D + + +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCD-H 97
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
L++ G S D T N LMN C + A KMM+ +PD T++ L+ C
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ- 483
E A + +++++ GI P V Y ++ LCKNG + A F Q+ G +
Sbjct: 158 MEEAMSMVNQMVEMGI-------KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
D Y L+ G C G + LL M +R PD + +LID +++G+ L A +
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELY 270
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
+M++ SI P T+ S++ G +G E+ + L+
Sbjct: 271 NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 157/350 (44%), Gaps = 11/350 (3%)
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEAL 323
P I+ + L++ + + K N+ + + ++ D+ + L+ +C A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHL--QIMGVSHDLYTCNLLMNCFCQSSQPYLAS 127
Query: 324 VVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG 383
+M+ G +P+ VT+ +LI G C ++++ ++ +E+G PD T+++
Sbjct: 128 SFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG-IKPDVVMYTTIIDS 186
Query: 384 HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR 443
C G++N AL +F++M + ++PD Y+ LV LC+ G + A+ L + K+ I
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI--- 243
Query: 444 DDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFE 502
P V + ++ K GK AE + ++++ + +Y LI G C EG +
Sbjct: 244 ----KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 503 AGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
++ LM + PD Y SLI+G + + A + +M + + T T+ +++
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 563 AGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
G + G + + + ++ + N+ + L NG K I
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 23/323 (7%)
Query: 375 CTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
C ++ ++ NEAL +F M+E + P ++ L+ + + F+ L D
Sbjct: 38 CNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH 97
Query: 435 LLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILII 493
L G+ S L M F C++ + A ++MK G + D ++ LI
Sbjct: 98 LQIMGV------SHDLYTCNLLMNCF-CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
G C E ++ M+ PD +Y ++ID L + G A +M I P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210
Query: 554 TTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIV 613
+ S++ GL G ++ SL+ + + KI+ +V T L +++ F
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI----TFNALIDAFVKEGKFLDA 266
Query: 614 GLLYDNGYMVDMK---------ELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVI 664
LY+ M+ M LI + EA ++ K D+ ++I
Sbjct: 267 EELYNE--MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 665 EGLCKMKKLSEAFGLYYELVEKG 687
G CK KK+ +A ++YE+ +KG
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKG 347
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 205/423 (48%), Gaps = 13/423 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++ I + R ++ + M +G PS+VT NSLL R + A ++ D+M+
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT TF L+ G +++ + ++M C PD+VTY +++G+C+ G+
Sbjct: 173 EM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A N++ M K + DVV Y T++ G C +++D+A +F +M KG+KP+ TYN
Sbjct: 232 DLALNLLNKMEKGK--IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI LC + +L LE +PD N L++ G L EA K++++M++
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLE-KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 403 WK-VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
K PD Y+ L++ C E +++ E+ ++G++ G+T Y ++
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV----GNT---VTYTTLIHGF 401
Query: 462 CKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
+ A+ F+Q++ G D +Y IL+ G C G E + M +R+ D
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
Y ++I+ L + G+ + + + P T+ ++++G +KG E+ +L V
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 581 LLE 583
+ E
Sbjct: 522 MKE 524
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 229/498 (45%), Gaps = 50/498 (10%)
Query: 113 LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGR 172
+ +G +HN +Y + + R L++A L + + G + NSL+ +
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVT---LNSLLNGFCH 157
Query: 173 AGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM--------LST 224
E+V L M +G P VTF +L+ L + + + A ++ + M L T
Sbjct: 158 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 225 YG--------------------------VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS 258
YG + D +N +I G CK +DD F F KM
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 259 SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN 318
+ PD+ TYN L+ +C G+ A ++ M++K ++NPD+V + L+ + +
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK--NINPDLVFFNALIDAFVKEGK 335
Query: 319 IDEALVVFEEMV-DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTL 377
+ EA +++EMV K P+ V YNTLIKG C+ +++++ EV + G +T T
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR-EMSQRGLVGNTVTY 394
Query: 378 NTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLK 437
TL++G A + + A VF++M+ V PD TY++L+ LC+ G+ E A +++ + K
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
Query: 438 KGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHC 496
+ + L + Y +M + LCK GK F L +G + + +Y ++ G C
Sbjct: 455 RDMKLD-------IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 497 KEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTS 556
++G E L V M P+S Y +LI L+ G+ + + +++M S
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 557 TFHSILAGLLKKGYAHES 574
TF ++ +L G +S
Sbjct: 568 TF-GLVTNMLHDGRLDKS 584
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 243/545 (44%), Gaps = 48/545 (8%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
+++ LF M PS+V F+ LL + K + ++ S+ ++M G++ + YT++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYS 114
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
I I FC+ S + KM P IVT N+L++G C ++ A +V MV+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
PD V++TTL+ G EA+ + E MV KG +P+ VTY +I GLC+ + D
Sbjct: 175 G--YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+L +E G D NT+++G C ++++A +F KM ++PD TY+ L
Sbjct: 233 LALNLLN-KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ LC+ G + A +L ++L+K I P + + ++ K GK +AE+ +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNI-------NPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 476 QLM--KRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
+++ K D +Y LI G CK E G E+ M +R ++ Y +LI G Q
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 534 GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLS 593
+ A ++M+ + P T++ +L GL G + + + + ++ ++
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 594 THTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHH 653
T + L G + G+ +F S S K ++ N +
Sbjct: 465 TTMIEALCKAGKVEDGWD------------------LFCSLSLKGVKPNVVTY------- 499
Query: 654 NIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLEN--LRVALEAGGRSKEV 711
T++ G C+ EA L+ E+ E G P S N +R L G +
Sbjct: 500 -------TTMMSGFCRKGLKEEADALFVEMKEDG-PLPNSGTYNTLIRARLRDGDEAASA 551
Query: 712 EFLSK 716
E + +
Sbjct: 552 ELIKE 556
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 211/466 (45%), Gaps = 20/466 (4%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F+ L+ + + F + L M+++G+S ++ T++ + +R + ++A ++ +M+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G P T N L+ GFC + + + +M PD VT+ TLV G+ + K
Sbjct: 138 K-LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +V+ MV K PD+V+Y ++ G C + D AL + +M ++ + V YN
Sbjct: 197 SEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
T+I GLC+ + +D ++ +E G PD T N L++ CN G ++A ++ M+E
Sbjct: 255 TIIDGLCKYKHMDDAFDLFN-KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD ++ L+ G AEKLYDE++K P V AY ++ + C
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF------PDVVAYNTLIKGFC 367
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K + + FR++ +RG + +Y LI G + + + M+ PD
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y L+DGL G A + M K + T+ +++ L K G + L L
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE 627
++ NV T + GL+++ + V+MKE
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEA---------DALFVEMKE 524
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 179/346 (51%), Gaps = 8/346 (2%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
P AL N + + + Y +++ L + ++++ A + ++ K +K +
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG---IKPDVFT 287
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N LI G + ++ +L + M ++P +V FN+L+ +K G+ A+ ++DEM+
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ PD +N LI+GFCK V++G F++MS + VTY TL+ G +A
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A V K MV S+ ++PD+++Y LL G C N++ ALVVFE M + +K + VTY
Sbjct: 408 DNAQMVFKQMV--SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
T+I+ LC+ K++ ++ +L + G P+ T T+M+G C G EA +F +M E
Sbjct: 466 TMIEALCKAGKVEDGWDLF-CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
P+S TY+ L+R GD + +L E+ G D ST
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG--FAGDAST 568
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 264/555 (47%), Gaps = 22/555 (3%)
Query: 172 RAGLFQ----ESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGV 227
R+GL +++ LF M P+V+ F+ L + K + ++ ++ +M G+
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM-ELKGI 119
Query: 228 APDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHN 287
A + YT +I+I FC+ + F K+ +P+ +T++TL++G+C G+V A
Sbjct: 120 AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 288 VVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKG 347
+V MV+ PD+++ TL+ G C+ EA+++ ++MV+ G +PNAVTY ++
Sbjct: 180 LVDRMVEMGH--KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 348 LCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQP 407
+C+ + E+L +E D + +++G C G+L+ A +F +M +
Sbjct: 238 MCKSGQTALAMELLR-KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 408 DSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKT 467
+ TY++L+ C+ G ++ KL +++K+ I P V + + K GK
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI-------NPNVVTFSVLIDSFVKEGKL 349
Query: 468 SKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSL 526
+AE ++++ RG D +Y LI G CKE + +++ LM+ + DP+ + L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 527 IDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKI 586
I+G + + +KM +V T T+++++ G + G + + L ++ K+
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 587 RQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMK--ELIIF-LSQSRKLLEANK 643
N+ + L NG +K I + + +D+ +II + + K+ +A
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 644 LLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLEN--LRVA 701
L K + N +I GLCK LSEA L+ ++ E G H P N +R
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG-HAPDGWTYNILIRAH 588
Query: 702 LEAGGRSKEVEFLSK 716
L G +K V+ + +
Sbjct: 589 LGDGDATKSVKLIEE 603
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 171/335 (51%), Gaps = 9/335 (2%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFS-IKRKSNGTVKLEDRFFN 164
A FN + G T N +Y +++ A + L IKRK N V F+
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT----FS 337
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI S+ + G +E+ +L M G++P +T+ SL+ K + A + D M+S
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P+ TFNILI G+CK + +DDG F+KMS D VTYNTL+ G C GK+
Sbjct: 398 -GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + + MV S + P++V+Y LL G C ++AL +FE++ ++ + YN +
Sbjct: 457 AKELFQEMV--SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I G+C K+D ++ +L + G P T N ++ G C G L+EA +F KM E
Sbjct: 515 IHGMCNASKVDDAWDLF-CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
PD TY++L+R GD ++ KL +EL + G
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 226/489 (46%), Gaps = 39/489 (7%)
Query: 183 FTSMKSV---GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIR 239
F++M + G P+ +TF++L+ L GR + A + D M+ G PD T N L+
Sbjct: 143 FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM-GHKPDLITINTLVN 201
Query: 240 GFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDL 299
G C + + KM + C P+ VTY +++ +C++G+ A +++ M +++ L
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 300 NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKE 359
D V Y+ ++ G C ++D A +F EM KG+ N +TYN LI G C + D +
Sbjct: 262 --DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 360 VLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
+L ++ +P+ T + L++ G L EA ++ ++M+ + PD+ TY+ L+
Sbjct: 320 LLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 420 CHIGDFERAEKLYDELLKKG---------ILLR--------DDG-------STPLVAA-- 453
C ++A ++ D ++ KG IL+ DDG S V A
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 454 --YKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVL 510
Y ++ Q C+ GK + A+ F++++ R + +YKIL+ G C G E E+
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGY 570
+ + + D IY +I G+ + A+ + + P T++ ++ GL KKG
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 571 AHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD---MKE 627
E+ L + E + +R +G K +++ L G+ VD +K
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 628 LIIFLSQSR 636
+I LS R
Sbjct: 619 VIDMLSDGR 627
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 181/425 (42%), Gaps = 53/425 (12%)
Query: 304 VSYTTLLRGYCMKQNIDEALVVFEEMVD-------------------------------- 331
+SY LR + D+A+ +F +M+
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 332 ---KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
KG+ N T + +I C +K+ + +++ G+ P+T T +TL+NG C G
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL-GYEPNTITFSTLINGLCLEG 172
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
++EAL++ ++M+E +PD T + LV LC G A L D++++ G
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-------GCQ 225
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYEL 507
P Y + +CK+G+T+ A R++ +R + D Y I+I G CK G+ + + L
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M + + Y LI G G + L+ M+K I P TF ++ +K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE 627
+G E+ L ++ I + T + DK ++V L+ G +++
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 628 LIIFLSQSRKLLEANK----LLLFCLEKHHNIDIDMC--NTVIEGLCKMKKLSEAFGLYY 681
I ++ K AN+ L LF + D NT+I+G C++ KL+ A L+
Sbjct: 406 FNILINGYCK---ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 682 ELVEK 686
E+V +
Sbjct: 463 EMVSR 467
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 217/468 (46%), Gaps = 19/468 (4%)
Query: 108 KFFNWLPQMG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
K F P+MG F D + M+E + + + L I+ ++ + +R F +
Sbjct: 62 KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVII---ERSFIVV 118
Query: 167 IRSYGRAGLFQESVKLFTSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST- 224
R+YG+A L ++V LF M SV +FNS+L +++ G + +D ++++
Sbjct: 119 FRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 225 --YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
++P+ +FN++I+ CK VD F+ M C PD TY TL+DG+C+ ++
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A ++ M +SE +P V Y L+ G C K ++ + + M KG PN VTYN
Sbjct: 239 DEAVLLLDEM--QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TLI GLC K+DK +LE + P+ T TL+NG +A+++ M E
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ YSVL+ L G E A L+ ++ +K G P + Y + LC
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-------GCKPNIVVYSVLVDGLC 408
Query: 463 KNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ GK ++A+ +++ G + +Y L+ G K G E ++ M + +
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
Y LIDGL G A KML I P T + SI+ GL G
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIG 516
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 240/542 (44%), Gaps = 50/542 (9%)
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
G+ KL D +S+I SY +G F KL + ++ + V+ S +++ G+ ++
Sbjct: 71 GSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIR---LENRVIIERSFIVVFRAYGKAHL 127
Query: 214 ---AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSS----FNCDPDI 266
A +F M+ + +FN ++ + G F+ + + N P+
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 267 VTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVF 326
+++N ++ +C+ V A V +GM ++ PD +Y TL+ G C ++ IDEA+++
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERK--CLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 327 EEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCN 386
+EM +G P+ V YN LI GLC+ + ++ ++++ + G P+ T NTL++G C
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF-LKGCVPNEVTYNTLIHGLCL 304
Query: 387 AGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDG 446
G L++A+ + E+M+ K P+ TY L+ L A +L + ++G L
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH- 363
Query: 447 STPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGY 505
Y + L K GK +A +R++ ++G + + Y +L+ G C+EG
Sbjct: 364 ------IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 506 ELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
E+L M+ P++ Y SL+ G + G A Q ++M K+ + ++ GL
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 566 LKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM 625
G E+ + +L I+ + + ++ L G D + LY
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK----LYHE------ 527
Query: 626 KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVE 685
L Q E D+ N +++GLC K +S A L +++
Sbjct: 528 -----MLCQE--------------EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 686 KG 687
+G
Sbjct: 569 RG 570
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 220/503 (43%), Gaps = 65/503 (12%)
Query: 105 KALKFFNWLPQ----MGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLED 160
+ L+F++++ M + N S+ L+++ L + R ++ A + + L D
Sbjct: 166 RGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKC----LPD 221
Query: 161 RF-FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
+ + +L+ + E+V L M+S G SPS V +N L+ L K+G + D
Sbjct: 222 GYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVD 281
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
M G P+ T+N LI G C +D ++M S C P+ VTY TL++G+ +
Sbjct: 282 NMF-LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ 340
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
+ A ++ M ++ LN + Y+ L+ G + +EA+ ++ +M +KG KPN V
Sbjct: 341 RRATDAVRLLSSMEERGYHLNQHI--YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 340 TYNTLIKGLCEVQKIDKIKEVL----------------------------EGALEVG--- 368
Y+ L+ GLC K ++ KE+L E A++V
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Query: 369 ---GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
G S + + L++G C G + EA+ V+ KM+ ++PD+ YS +++ LC IG
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP 485
+ A KLY E+L + + S P V Y + LC S+A ++ RG
Sbjct: 519 DAALKLYHEMLCQ----EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG---- 570
Query: 486 TSYKILIIGHCKEGTFEAGYELLVLMLRRN-FDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
C L L + N D + L+ LL++ A ++
Sbjct: 571 ----------CDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVE 620
Query: 545 KMLKSSIVPTTSTFHSILAGLLK 567
ML + P TST+ I+ + K
Sbjct: 621 VMLGKYLAPKTSTWAMIVREICK 643
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 168/427 (39%), Gaps = 60/427 (14%)
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVD-----KGLKPNAVTYNTLIKGLCEVQKIDKIKE 359
S+ + R Y D+A+ +F MVD + +K N +I + ++
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 360 VLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
V+ + + SP+ + N ++ C ++ A++VF M E K PD TY L+ L
Sbjct: 174 VVNSNMNMN-ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232
Query: 420 CHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK 479
C + A L DE+ + +G +P
Sbjct: 233 CKEERIDEAVLLLDEM-------QSEGCSP------------------------------ 255
Query: 480 RGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
P Y +LI G CK+G +L+ M + P+ Y +LI GL KG+ A
Sbjct: 256 ----SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 540 YQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRL 599
L++M+ S +P T+ +++ GL+K+ A ++ L+ + E N + + +
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 600 LFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLLEANKLL-----LFCLEK 651
LF G ++ + + + G +V L+ L + K EA ++L CL
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 652 HHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEV 711
+ M GLC+ EA ++ E+ + G + C L L GR KE
Sbjct: 432 AYTYSSLMKGFFKTGLCE-----EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 712 EFLSKRM 718
+ +M
Sbjct: 487 MMVWSKM 493
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 147/602 (24%), Positives = 260/602 (43%), Gaps = 84/602 (13%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
P++AL+ + + G + Y L ++ + +L +A + L +K K E
Sbjct: 249 PAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQET-- 306
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ S+I + + G ++++L M S G+S +VV SL+ K A +FD+M
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM- 365
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG------- 275
G +P++ TF++LI F KN ++ F++KM P + +T++ G
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 276 ---------------------------VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTT 308
+C+ GK A ++ M +S + P+VVSY
Sbjct: 426 EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM--ESRGIGPNVVSYNN 483
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPN------------------------------- 337
++ G+C ++N+D A +VF +++KGLKPN
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 338 ----AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
V Y T+I GLC+V + K +E+L +E + N++++G G ++ A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+ +E+M + P+ TY+ L+ LC ++A ++ DE+ KG+ L + A
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD-------IPA 656
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLM 511
Y ++ CK A F +L++ G +P+ Y LI G G A +L M
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGL-NPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
L+ D Y +LIDGLL+ G +LA + +M +VP + I+ GL KKG
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 572 HESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIF 631
+ + + + + NV + + + G D+ FR+ + D G + D I
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Query: 632 LS 633
+S
Sbjct: 836 VS 837
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 214/415 (51%), Gaps = 11/415 (2%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N+++ + G E+ +L + M+S G+ P+VV++N+++L ++ ++A+ VF +L
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G+ P+ YT++ILI G +N + M+S N + + V Y T+++G+C+ G+
Sbjct: 507 K-GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A ++ M+++ L +SY +++ G+ + +D A+ +EEM G+ PN +TY +
Sbjct: 566 KARELLANMIEEKR-LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L+ GLC+ ++D+ E + ++ G D L++G C N+ A +F +++E
Sbjct: 625 LMNGLCKNNRMDQALE-MRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
+ P Y+ L+ ++G+ A LY ++LK G LR D + Y ++ L K
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG--LRCD-----LGTYTTLIDGLLK 736
Query: 464 NGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
+G A + ++ G D Y +++ G K+G F ++ M + N P+ I
Sbjct: 737 DGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
Y ++I G ++G A++ +ML I+P +TF +++G + +ASL
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/618 (22%), Positives = 266/618 (43%), Gaps = 40/618 (6%)
Query: 103 PSKALKFFNWL-PQMGFTHNDQSYFLMLEIL-GRARNLNVARNFLFSIKRKSNGT----- 155
P AL+F+NW P G + +++++ IL A + L SN T
Sbjct: 86 PEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVSTSNPTPMASV 145
Query: 156 -------------VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL 202
++ R FN L+ +Y + +V + M + V P N L
Sbjct: 146 LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTL 205
Query: 203 LILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNC 262
L++R AK ++ M++ GV D T +L+R + + +
Sbjct: 206 SALVQRNSLTEAKELYSRMVAI-GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264
Query: 263 DPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEA 322
+PD + Y+ V C+ + A+++++ M K+ + P +YT+++ + N+D+A
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREM-KEKKLCVPSQETYTSVILASVKQGNMDDA 323
Query: 323 LVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMN 382
+ + +EM+ G+ N V +LI G C+ + VL +E G SP++ T + L+
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL-VLFDKMEKEGPSPNSVTFSVLIE 382
Query: 383 GHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL 442
G + +AL+ ++KM + P +++ E A KL+DE + G+
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-- 440
Query: 443 RDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTF 501
V ++ +LCK GKT +A ++ RG + SY +++GHC++
Sbjct: 441 ------ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM 494
Query: 502 EAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSI 561
+ + +L + P++ Y LIDG + + A + + M S+I + +I
Sbjct: 495 DLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
Query: 562 LAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHT--VRLLFSNGLRDKGFRIVGLLYDN 619
+ GL K G ++ L+ ++E K R V+ ++ + F G D + N
Sbjct: 555 INGLCKVGQTSKARELLANMIEEK-RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 620 GY---MVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEA 676
G ++ L+ L ++ ++ +A ++ K +DI +I+G CK + A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 677 FGLYYELVEKG--NHQPL 692
L+ EL+E+G QP+
Sbjct: 674 SALFSELLEEGLNPSQPI 691
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 69/253 (27%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NS+I + + G +V + M G+SP+V+T+ SL+ L K R + A + DEM
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM- 645
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDD-------------------------GFR----- 252
GV D + LI GFCK S ++ GFR
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 253 -----FFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHN-------------------V 288
++KM D+ TY TL+DG+ + G + A +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 289 VKGMVKKSE--------------DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL 334
V G+ KK + ++ P+V+ Y ++ G+ + N+DEA + +EM+DKG+
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 335 KPNAVTYNTLIKG 347
P+ T++ L+ G
Sbjct: 826 LPDGATFDILVSG 838
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 225/449 (50%), Gaps = 16/449 (3%)
Query: 103 PSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
P L FN Q GF HN+ +Y ++L+ L R + L +K + T + ++
Sbjct: 69 PQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYE---TCRFQES 125
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVG-VSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
F +L+R + R+ L + +++F ++ + V PS+ ++ L +L+ G N+++ +
Sbjct: 126 LFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLY 185
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD-PDIVTYNTLVDGVCRA 279
G+ P+T FNIL++ CKN ++ F ++M P+ +TY+TL+D +
Sbjct: 186 AKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAH 245
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
+ K A + + M+ K E ++PD V++ ++ G+C ++ A + + M G PN
Sbjct: 246 SRSKEAVELFEDMISK-EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVY 304
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
Y+ L+ G C+V KI + K+ + ++ G DT TLMN C G +EA+K+ +
Sbjct: 305 NYSALMNGFCKVGKIQEAKQTFD-EVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE 363
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M + + D+ TY+V++R L G E A ++ D+ +G+ L +Y+ +
Sbjct: 364 MKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK-------GSYRIILN 416
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
LC NG+ KA + + +RG ++ L++ C+ G E G +L+ LR P
Sbjct: 417 ALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
+ + ++++ + ++ + + ++ L ++
Sbjct: 477 GPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 160/338 (47%), Gaps = 11/338 (3%)
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSF-NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
L+R F ++ + D F + P + +T ++ + +G+V + ++ K
Sbjct: 130 LMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLL-YAKH 188
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK-PNAVTYNTLIKGLCEVQKI 354
+ L P+ + L++ +C +I+ A +V EEM G+ PN++TY+TL+ L +
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
+ E+ E + G SPD T N ++NG C AG + A K+ + M + P+ YS
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ C +G + A++ +DE+ K G+ L G T L+ + C+NG+T +A +
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF-------CRNGETDEAMKLL 361
Query: 475 RQL-MKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
++ R D +Y +++ G EG E ++L + Y+ +++ L
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Query: 534 GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
GE A + L M + I P +T++ ++ L + GY
Sbjct: 422 GELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYT 459
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 150/355 (42%), Gaps = 43/355 (12%)
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
GL+PN +N L+K C+ I+ V+E G P++ T +TLM+ E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 393 ALKVFEKMMEWK-VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
A+++FE M+ + + PD T++V++ C G+ ERA+K+ D ++ +G P V
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD-------FMKKNGCNPNV 303
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVL 510
Y ++ CK GK +A++ F ++ K G + D Y L+ C+ G + +LL
Sbjct: 304 YNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE 363
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGY 570
M D+ Y ++ GL +G A Q L + + ++ IL L G
Sbjct: 364 MKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGE 423
Query: 571 AHESASLVVLLLE-GKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELI 629
++ + ++ E G + T + VRL S G + G R+ LI
Sbjct: 424 LEKAVKFLSVMSERGIWPHHATWNELVVRLCES-GYTEIGVRV---------------LI 467
Query: 630 IFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELV 684
FL L+ K V+E +CK +KL F L LV
Sbjct: 468 GFLRIG--LIPGPKSW---------------GAVVESICKERKLVHVFELLDSLV 505
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 124/263 (47%), Gaps = 11/263 (4%)
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG--NLNEALKVFEKMMEWKVQPDSATY 412
DK+ E+ + P ++T +N ++G NL+ L ++ K +QP++ +
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKH-NLGLQPNTCIF 199
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
++LV++ C GD A + +E+ + GI S P Y ++ L + ++ +A
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGI------SYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 473 GFRQLM-KRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
F ++ K G + DP ++ ++I G C+ G E ++L M + +P+ Y +L++G
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 531 LQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
+ G+ A QT ++ K+ + T + +++ + G E+ L+ + + R +
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Query: 591 TLSTHTVRLLFSNGLRDKGFRIV 613
+R L S G ++ +++
Sbjct: 374 LTYNVILRGLSSEGRSEEALQML 396
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 205/423 (48%), Gaps = 43/423 (10%)
Query: 131 ILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKL-FTSMKSV 189
+ G AR L+ F G V + R +NSLI + GL + V L ++ M +
Sbjct: 74 LYGAARTLSAMCTF---------GVVP-DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIAC 123
Query: 190 GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
GVSP V N L+ K GR + A S +L ++ DT T+N +I G C++ + D+
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAIS----LLRNRVISIDTVTYNTVISGLCEHGLADE 179
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
++F +M PD V+YNTL+DG C+ G A K +V + +LN ++++T L
Sbjct: 180 AYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA----KALVDEISELN--LITHTIL 233
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL---- 365
L Y I+EA + +MV G P+ VT++++I LC+ K VLEG L
Sbjct: 234 LSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGK------VLEGGLLLRE 284
Query: 366 -EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
E P+ T TL++ A AL ++ +M+ + D Y+VL+ L GD
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-Q 483
AEK + LL +D P V Y ++ LCK G S AE Q++++
Sbjct: 345 LREAEKTFKMLL-------EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIP 397
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
+ +Y +I G+ K+G E LL M +N P+ Y ++IDGL + G+ +A +
Sbjct: 398 NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 544 QKM 546
++M
Sbjct: 458 KEM 460
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 191/410 (46%), Gaps = 23/410 (5%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F++L R Y + + ++M + GV P +NSL+ G + S+
Sbjct: 60 LFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSK 119
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ GV+PD + N+LI FCK + + D VTYNT++ G+C G
Sbjct: 120 MIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGL 176
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
A+ + MVK + PD VSY TL+ G+C N A + +VD+ + N +T+
Sbjct: 177 ADEAYQFLSEMVKMG--ILPDTVSYNTLIDGFCKVGNFVRA----KALVDEISELNLITH 230
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
L+ + I++ + + GF PD T ++++N C G + E + +M
Sbjct: 231 TILLSSYYNLHAIEEAYR----DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME 286
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
E V P+ TY+ LV +L + A LY +++ +GI + + Y + L
Sbjct: 287 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD-------LVVYTVLMDGL 339
Query: 462 CKNGKTSKAERGFRQLMKRGTQDP--TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
K G +AE+ F+ L++ Q P +Y L+ G CK G + ++ ML ++ P+
Sbjct: 340 FKAGDLREAEKTFKMLLE-DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
Y S+I+G ++KG A L+KM ++VP T+ +++ GL K G
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 183/412 (44%), Gaps = 46/412 (11%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
V L+ + SLI + + G + ++ M+ G+ VV++N L+ +LK G+ A
Sbjct: 500 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-AD 558
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
+ M G+ PD TFNI++ K + + + KM S P +++ N +V
Sbjct: 559 WAYKGMREK-GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGM 617
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
+C GK++ A +++ M+ +++P++ +Y L + D E ++ G+K
Sbjct: 618 LCENGKMEEAIHILNQMMLM--EIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIK 675
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
+ YNTLI LC++ K V+ G +E GF PDT T N+LM+G+ ++ +AL
Sbjct: 676 LSRQVYNTLIATLCKLGMTKKAAMVM-GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALS 734
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
+ MME + P+ ATY+ ++R L G + +K E+
Sbjct: 735 TYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM-------------------- 774
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
RG R D +Y LI G K G + + M+
Sbjct: 775 --------------KSRGMR-------PDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 813
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
P + Y LI G+ L A + L++M K + P TST+ ++++GL K
Sbjct: 814 LVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/561 (24%), Positives = 243/561 (43%), Gaps = 52/561 (9%)
Query: 146 FSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLIL 205
F+I N + ++ +N++I GL E+ + + M +G+ P V++N+L+
Sbjct: 147 FAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGF 206
Query: 206 LKRGRTNMAKSVFDE-----------MLSTY----------------GVAPDTYTFNILI 238
K G AK++ DE +LS+Y G PD TF+ +I
Sbjct: 207 CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSII 266
Query: 239 RGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSED 298
CK V +G ++M + P+ VTY TLVD + +A + A + MV +
Sbjct: 267 NRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG-- 324
Query: 299 LNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
+ D+V YT L+ G ++ EA F+ +++ PN VTY L+ GLC+ + +
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
++ LE P+ T ++++NG+ G L EA+ + KM + V P+ TY ++
Sbjct: 385 FIITQMLE-KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
L G E A +L E+ G+ ++ + L A + L + G+ + + + ++
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGV---EENNYILDA----LVNHLKRIGRIKEVKGLVKDMV 496
Query: 479 KRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
+G T D +Y LI K G EA M R D Y LI G+L+ G+ +
Sbjct: 497 SKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-V 555
Query: 538 LAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTV 597
A + M + I P +TF+ ++ K+G + L + I+ ++ V
Sbjct: 556 GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVV 615
Query: 598 RLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHN--- 654
+L NG ++ I+ + ++ IFL S K A+ + K H
Sbjct: 616 GMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF-----KTHETLL 670
Query: 655 -----IDIDMCNTVIEGLCKM 670
+ + NT+I LCK+
Sbjct: 671 SYGIKLSRQVYNTLIATLCKL 691
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 147/628 (23%), Positives = 270/628 (42%), Gaps = 62/628 (9%)
Query: 113 LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGR 172
+ +M N +Y +++ L +A N+ R+ L + + ++ + L+ +
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKA---NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 173 AGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTY 232
AG +E+ K F + P+VVT+ +L+ L K G + A+ + +ML V P+
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK-SVIPNVV 400
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV---- 288
T++ +I G+ K M+++ +KM N P+ TY T++DG+ +AGK + A +
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 289 ---------------------------VKGMVKK--SEDLNPDVVSYTTLLRGYCMKQNI 319
VKG+VK S+ + D ++YT+L+ + +
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
+ AL EEM ++G+ + V+YN LI G+ + K+ +G E G PD T N
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGA-DWAYKGMRE-KGIEPDIATFNI 578
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
+MN G+ LK+++KM ++P + +++V LC G E A + ++++
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKE 498
I P + Y+ K+ + + L+ G + Y LI CK
Sbjct: 639 I-------HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKL 691
Query: 499 GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTF 558
G + ++ M R F PD+ + SL+ G A T M+++ I P +T+
Sbjct: 692 GMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATY 751
Query: 559 HSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYD 618
++I+ GL G E + + +R + + G I +
Sbjct: 752 NTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIA 811
Query: 619 NGYMVDMKELIIFLSQ---SRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKM----- 670
+G + + +S+ K+L+A +LL ++ + + T+I GLCK+
Sbjct: 812 DGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPD 871
Query: 671 ----KK---LSEAFGLYYELVEKGNHQP 691
KK L+EA GL E+VE+ + P
Sbjct: 872 VEWNKKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 167/358 (46%), Gaps = 43/358 (12%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN ++ S + G + +KL+ MKS G+ PS+++ N ++ +L + G+ A + ++M+
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ P+ T+ I + K+ D F+ + + S+ YNTL+ +C+ G
Sbjct: 636 -LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMT 694
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K A V+ M ++ PD V++ +L+ GY + ++ +AL + M++ G+ PN TYN
Sbjct: 695 KKAAMVMGDM--EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752
Query: 343 TLIKGLCE---VQKIDK----------------IKEVLEGALEVG--------------- 368
T+I+GL + ++++DK ++ G ++G
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHI---GDF 425
G P T T N L++ N G + +A ++ ++M + V P+++TY ++ LC + D
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 872
Query: 426 ERAEKLYDELLKKGIL---LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
E +K KG+L + + G P + K G AER ++ K+
Sbjct: 873 EWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKK 930
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 189/442 (42%), Gaps = 61/442 (13%)
Query: 301 PDVVSYTTLLRGYCMKQNI-DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKE 359
PD + +L+ + + + D+ +++ +M+ G+ P+ N LI C+V ++
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 360 VLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
+L + S DT T NT+++G C G +EA + +M++ + PD+ +Y+ L+
Sbjct: 151 LLRNRV----ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGF 206
Query: 420 CHIGDFERAEKLYDE-----LLKKGILL-------------RD---DGSTPLVAAYKSMF 458
C +G+F RA+ L DE L+ ILL RD G P V + S+
Sbjct: 207 CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSII 266
Query: 459 QFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
LCK GK + R++ + + +Y L+ K + L M+ R
Sbjct: 267 NRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 326
Query: 518 PDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
D +Y L+DGL + G+ A +T + +L+ + VP T+ +++ GL K G + +
Sbjct: 327 VDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFI 386
Query: 578 VVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRK 637
+ +LE + NV + + NGY+ +
Sbjct: 387 ITQMLEKSVIPNVVTYSSMI---------------------NGYV------------KKG 413
Query: 638 LLEANKLLLFCLEKHHNIDIDMC-NTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLE 696
+LE LL +E + + TVI+GL K K A L E+ G + L+
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Query: 697 NLRVALEAGGRSKEVEFLSKRM 718
L L+ GR KEV+ L K M
Sbjct: 474 ALVNHLKRIGRIKEVKGLVKDM 495
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 171/687 (24%), Positives = 276/687 (40%), Gaps = 136/687 (19%)
Query: 95 QVLRLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN 153
+VLRLI PS + FF W Q+G+ H Y +++++ R + V FL I+
Sbjct: 96 EVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK 155
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
++ F N L+R + R G F +++ +K PS T+N L+ LK R +
Sbjct: 156 ---EVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDS 212
Query: 214 AKSVFDEM-------------------------------LSTYGVAPDTYTFNILIRGFC 242
A + EM + T PDT + LI G C
Sbjct: 213 ASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLC 272
Query: 243 KNSMVDDGFRFFQKMSSFNCDPDIVTY--------------------------------- 269
+ S+ ++ F +M + +C P++VTY
Sbjct: 273 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 332
Query: 270 --NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN------IDE 321
N+LV C +G A+ ++K MVK P V Y L+ C ++ +D
Sbjct: 333 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGH--MPGYVVYNILIGSICGDKDSLNCDLLDL 390
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLM 381
A + EM+ G+ N + ++ + LC K +K V+ + GF PDT T + ++
Sbjct: 391 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG-QGFIPDTSTYSKVL 449
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
N CNA + A +FE+M + D TY+++V + C G E+A K ++E
Sbjct: 450 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE------- 502
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGT 500
+R+ G TP V Y ++ K K S A F ++ G + +Y LI GHCK G
Sbjct: 503 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 562
Query: 501 FEAGYELL-----------VLMLRRNFDPDSE-----IYQSLIDGLLQKGEPLLAYQTLQ 544
E ++ V M + +D +SE Y +L+DG + A + L
Sbjct: 563 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 622
Query: 545 KMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNG 604
M P + +++ GL K G E+ + +S H
Sbjct: 623 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-----------KTEMSEH--------- 662
Query: 605 LRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVI 664
GF LY ++D + R+ L A+K+L LE ++ + +I
Sbjct: 663 ----GFP--ATLYTYSSLIDR-----YFKVKRQDL-ASKVLSKMLENSCAPNVVIYTEMI 710
Query: 665 EGLCKMKKLSEAFGLYYELVEKGNHQP 691
+GLCK+ K EA+ L + EKG QP
Sbjct: 711 DGLCKVGKTDEAYKLMQMMEEKGC-QP 736
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 252/542 (46%), Gaps = 62/542 (11%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+S R AG ++++ + M G P T++ +L L + +A +F+EM
Sbjct: 411 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-K 469
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G+ D YT+ I++ FCK +++ ++F +M C P++VTY L+ +A KV
Sbjct: 470 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 529
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV------------- 330
A+ + + M+ SE P++V+Y+ L+ G+C +++A +FE M
Sbjct: 530 YANELFETML--SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587
Query: 331 ---DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
D +PN VTY L+ G C+ ++++ +++L+ A+ + G P+ + L++G C
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD-AMSMEGCEPNQIVYDALIDGLCKV 646
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
G L+EA +V +M E TYS L+ + + A K+ ++L ++
Sbjct: 647 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML-------ENSC 699
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYE 506
P V Y M LCK GKT +A + + + ++G Q + +Y +I G G E E
Sbjct: 700 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 759
Query: 507 LLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLL 566
LL M + P+ Y+ LID + G +A+ L++M ++ T+ + ++ G
Sbjct: 760 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 819
Query: 567 KKGYAHESASLVVLLLEGKIRQNVTLSTHTV-RLLFSNGLRDKGFRIVGLLYDNGYMVDM 625
K+ ES L+ +I Q+ T +V RLL N ++ + + L +
Sbjct: 820 KEFI--ESLGLL-----DEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL--------L 864
Query: 626 KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVE 685
+E+ F S L++ + N++IE LC K+ AF L+ E+ +
Sbjct: 865 EEVATF---SATLVDYSSTY---------------NSLIESLCLANKVETAFQLFSEMTK 906
Query: 686 KG 687
KG
Sbjct: 907 KG 908
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 203/438 (46%), Gaps = 27/438 (6%)
Query: 146 FSIKRKSNGTVKLEDRFFNSLIRSY-GRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLI 204
FS+ R+ G + D S + +Y A + + LF MK G+ V T+ ++
Sbjct: 427 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 486
Query: 205 LLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
K G A+ F+EM G P+ T+ LI + K V F+ M S C P
Sbjct: 487 FCKAGLIEQARKWFNEMREV-GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 545
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMV--KKSEDLN------------PDVVSYTTLL 310
+IVTY+ L+DG C+AG+V+ A + + M K D++ P+VV+Y LL
Sbjct: 546 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 605
Query: 311 RGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGF 370
G+C ++EA + + M +G +PN + Y+ LI GLC+V K+D+ +EV + + GF
Sbjct: 606 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV-KTEMSEHGF 664
Query: 371 SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEK 430
T ++L++ + + A KV KM+E P+ Y+ ++ LC +G + A K
Sbjct: 665 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 724
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYK 489
L ++ + G P V Y +M GK ++ +G + +Y+
Sbjct: 725 LMQ-------MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 777
Query: 490 ILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS 549
+LI CK G + + LL M + ++ + Y+ +I+G E + + L ++ +
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD 835
Query: 550 SIVPTTSTFHSILAGLLK 567
P S + ++ L+K
Sbjct: 836 DTAPFLSVYRLLIDNLIK 853
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 214/470 (45%), Gaps = 69/470 (14%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
R N L+ + + G + + F M G P+V T+N ++ + K G A+ +F+E
Sbjct: 96 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 155
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
M G+ PDT T+N +I GF K +DD FF++M C+PD++TYN L++ C+ G
Sbjct: 156 M-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 214
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYC----MKQ------------------- 317
K+ + M K L P+VVSY+TL+ +C M+Q
Sbjct: 215 KLPIGLEFYREM--KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 272
Query: 318 ------------NIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
N+ +A + EM+ G++ N VTY LI GLC+ +++ + +E+ G +
Sbjct: 273 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF-GKM 331
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
+ G P+ + N L++G A N++ AL++ ++ ++PD Y + LC +
Sbjct: 332 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 391
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAY-KS---------------------------M 457
E A+ + +E+ + GI T L+ AY KS +
Sbjct: 392 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 451
Query: 458 FQFLCKNGKTSKAERGFRQLMKR-GTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
LCKN SKA F ++ G Q + + +I G CK+ EA L M+++
Sbjct: 452 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 511
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
PD Y SL+DG ++G L A KM + + + S++ GL
Sbjct: 512 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 243/572 (42%), Gaps = 66/572 (11%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
GF H+ +SY ++ IL AR A + L ++ S +F
Sbjct: 5 GFKHSVESYCIVAHILFCARMYYDANSVL------------------KEMVLSKADCDVF 46
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
+ S ++V V P F++L +L+ G A F +M + V P T + N
Sbjct: 47 D----VLWSTRNVCV-PGFGVFDALFSVLIDLGMLEEAIQCFSKM-KRFRVFPKTRSCNG 100
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
L+ F K DD RFF+ M P + TYN ++D +C+ G V+ A + + M K
Sbjct: 101 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM--KF 158
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
L PD V+Y +++ G+ +D+ + FEEM D +P+ +TYN LI C+ K+
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
E ++ G P+ + +TL++ C G + +A+K + M + P+ TY+ L+
Sbjct: 219 GLEFYR-EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 277
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
C IG+ A +L +E+L+ G+ V Y ++ LC + +AE F +
Sbjct: 278 DANCKIGNLSDAFRLGNEMLQVGVEWN-------VVTYTALIDGLCDAERMKEAEELFGK 330
Query: 477 LMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
+ G + SY LI G K + ELL + R PD +Y + I GL +
Sbjct: 331 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 390
Query: 536 PLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTH 595
A + +M + I + + +++ K G E L+ + E I VT+ T
Sbjct: 391 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE--VTVVTF 448
Query: 596 TVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNI 655
V + +GL + Y N D L+AN +
Sbjct: 449 CVLI---DGLCKNKLVSKAVDYFNRISNDFG------------LQANAAIF--------- 484
Query: 656 DIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+I+GLCK ++ A L+ ++V+KG
Sbjct: 485 -----TAMIDGLCKDNQVEAATTLFEQMVQKG 511
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 162/340 (47%), Gaps = 14/340 (4%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVA---RNFLFSIKRKSNGTVKLEDR 161
+A+KF+ + ++G N+ +Y +++ + NL+ A N + + + N
Sbjct: 253 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT----- 307
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+ +LI A +E+ +LF M + GV P++ ++N+L+ +K + A + +E
Sbjct: 308 -YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE- 365
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
L G+ PD + I G C ++ +M + + Y TL+D ++G
Sbjct: 366 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 425
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV-DKGLKPNAVT 340
+++ M K D+ VV++ L+ G C + + +A+ F + D GL+ NA
Sbjct: 426 PTEGLHLLDEM--KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 483
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+ +I GLC+ +++ + E ++ G PD +LM+G+ GN+ EAL + +KM
Sbjct: 484 FTAMIDGLCKDNQVEAATTLFEQMVQ-KGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 542
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
E ++ D Y+ LV L H ++A +E++ +GI
Sbjct: 543 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 582
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 168/414 (40%), Gaps = 75/414 (18%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
L+F+ + G N SY +++ + + A F ++R G V E + S
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV--GLVPNE-YTYTS 275
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI + + G ++ +L M VGV +VVT+ +L+ L R A+ +F +M T
Sbjct: 276 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTA 334
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
GV P+ ++N LI GF K +D ++ PD++ Y T + G+C K++ A
Sbjct: 335 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 394
Query: 286 HNVVKGMVK---------------------------------KSEDLNPDVVSYTTLLRG 312
V+ M + K D+ VV++ L+ G
Sbjct: 395 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 454
Query: 313 YCMKQNIDEALVVFEEMV-DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFS 371
C + + +A+ F + D GL+ NA + +I GLC+ +++ + E ++ G
Sbjct: 455 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ-KGLV 513
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMME--------------W-------------- 403
PD +LM+G+ GN+ EAL + +KM E W
Sbjct: 514 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 573
Query: 404 -------KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD-DGSTP 449
+ PD +++ +G + A +L L+K +L D D + P
Sbjct: 574 LEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALP 627
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 212/434 (48%), Gaps = 12/434 (2%)
Query: 172 RAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDT 231
+ GL+ + KL M S+G+ P+V + +L L + + A+ +F E++ +GV P+
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF-ELMKKHGVLPNL 269
Query: 232 YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKG 291
YT++ +I G+CK V + ++++ P++V + TLVDG C+A ++ TA ++
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 292 MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV 351
MVK D P++ Y L+ G+C N+ EA+ + EM L P+ TY LI GLC
Sbjct: 330 MVKFGVD--PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE 387
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
++ + + + F P + T N+L++G+C N+ +AL + +M V+P+ T
Sbjct: 388 DQVAEANRLFQKMKNERIF-PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
+S L+ C++ D + A LY E+ KGI+ P V Y ++ K +A
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIV-------PDVVTYTALIDAHFKEANMKEAL 499
Query: 472 RGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
R + +++ G + ++ L+ G KEG + ++ + + LI+GL
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Query: 531 LQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
Q G L A + M I P ++ S+L G L++ ++ L +++ I N+
Sbjct: 560 CQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL 619
Query: 591 TLSTHTVRLLFSNG 604
++ R +NG
Sbjct: 620 LVNQLLARFYQANG 633
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 215/471 (45%), Gaps = 37/471 (7%)
Query: 121 ND-QSYFLMLEILGRARNLNVARNFLFSI----KRKSNGTVKLEDRFFNSL--------- 166
ND QS+ ++ +L A +AR + S+ KR S + + R FN+L
Sbjct: 73 NDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPS-NMSHRLFNALEDIQSPKFS 131
Query: 167 -------IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
I + GLF+E++ + MK SP S+L L++R R + +
Sbjct: 132 IGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQ 188
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
M+S G+ PD + + +L + K + + +M+S P++ Y + +CR
Sbjct: 189 LMISR-GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
K++ A + + M K + P++ +Y+ ++ GYC N+ +A +++E++ L PN V
Sbjct: 248 NKMEEAEKMFELM--KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
+ TL+ G C+ +++ + + ++ G P+ N L++GHC +GN+ EA+ + +
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKF-GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M + PD TY++L+ LC A +L+ ++ + I P A Y S+
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF-------PSSATYNSLIH 417
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
CK +A ++ G + + ++ LI G+C +A L M + P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
D Y +LID ++ A + ML++ I P TF ++ G K+G
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 134/305 (43%), Gaps = 12/305 (3%)
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
V + +PD + ++L G ++ D V ++ M+ +GL P+ Y L + C Q
Sbjct: 154 VSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQ-CCFKQ 212
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+ KE L + G P+ + C + EA K+FE M + V P+ TY
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
S ++ C G+ +A LY E+L +L P V + ++ CK + A
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELL-------PNVVVFGTLVDGFCKARELVTARS 325
Query: 473 GFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
F ++K G DP Y LI GHCK G LL M N PD Y LI+GL
Sbjct: 326 LFVHMVKFGV-DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 531 LQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQN- 589
+ + A + QKM I P+++T++S++ G K+ ++ L + + N
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 590 VTLST 594
+T ST
Sbjct: 445 ITFST 449
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 173/335 (51%), Gaps = 9/335 (2%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFS-IKRKSNGTVKLEDRFFN 164
A FN + GF + Y ++ A + L IKRK V F+
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA----FS 321
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+LI + + G +E+ +L M G+SP VT+ SL+ K + + A + D M+S
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P+ TFNILI G+CK +++DDG F+KMS D VTYNTL+ G C GK++
Sbjct: 382 -GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + + MV S + PD+VSY LL G C ++AL +FE++ ++ + YN +
Sbjct: 441 AKELFQEMV--SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I G+C K+D ++ +L + G PD T N ++ G C G+L+EA +F KM E
Sbjct: 499 IHGMCNASKVDDAWDLF-CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
P+ TY++L+R GD ++ KL +E+ + G
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/557 (24%), Positives = 245/557 (43%), Gaps = 47/557 (8%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F+ L R + + L M+ G++ ++ T + ++ + + ++A S +++
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PDT TF+ LI G C V + +M P ++T N LV+G+C GKV
Sbjct: 135 K-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A ++ MV+ P+ V+Y +L+ C A+ + +M ++ +K +AV Y+
Sbjct: 194 SDAVLLIDRMVETG--FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+I GLC+ +D + +E+ GF D TL+ G C AG ++ K+ M++
Sbjct: 252 IIIDGLCKDGSLDNAFNLFN-EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
K+ PD +S L+ G AE+L+ E++++GI +P Y S+ C
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI-------SPDTVTYTSLIDGFC 363
Query: 463 KNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K + KA ++ +G + ++ ILI G+CK + G EL M R D+
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y +LI G + G+ +A + Q+M+ + P ++ +L GL G ++ + +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEA 641
+ K+ ++ + + I+ I + + K+ +A
Sbjct: 484 EKSKMELDIGI-----------------YNII---------------IHGMCNASKVDDA 511
Query: 642 NKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLEN--LR 699
L K D+ N +I GLCK LSEA L+ ++ E G H P C N +R
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG-HSPNGCTYNILIR 570
Query: 700 VALEAGGRSKEVEFLSK 716
L G +K + + +
Sbjct: 571 AHLGEGDATKSAKLIEE 587
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/547 (23%), Positives = 247/547 (45%), Gaps = 18/547 (3%)
Query: 94 FQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN 153
F V+ K L + G HN + +M+ R R L++A + + I +
Sbjct: 79 FSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG- 137
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
+ + F++LI G E+++L M +G P+++T N+L+ L G+ +
Sbjct: 138 --YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A + D M+ T G P+ T+ +++ CK+ +KM D V Y+ ++
Sbjct: 196 AVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
DG+C+ G + A N+ M K D++ YTTL+RG+C D+ + +M+ +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKG--FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+ P+ V ++ LI + K+ + +E+ + ++ G SPDT T +L++G C L++A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+ + M+ P+ T+++L+ C + +L+ ++ +G++
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD-------TVT 424
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLML 512
Y ++ Q C+ GK A+ F++++ R + D SYKIL+ G C G E E+ +
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 513 RRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAH 572
+ + D IY +I G+ + A+ + + P T++ ++ GL KKG
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 573 ESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD---MKELI 629
E+ L + E N +R G K +++ + G+ VD +K ++
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Query: 630 IFLSQSR 636
LS R
Sbjct: 605 DMLSDGR 611
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 184/422 (43%), Gaps = 47/422 (11%)
Query: 304 VSYTTLLRGYCMKQNIDEALVVFEEM---------VD----------------------- 331
VSY LR + D+A+ +F+EM +D
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 332 ---KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
KG+ N T + +I C +K+ + +++ G+ PDT T +TL+NG C G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL-GYEPDTVTFSTLINGLCLEG 156
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
++EAL++ ++M+E +P T + LV LC G A L D +++ G
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF-------Q 209
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYEL 507
P Y + + +CK+G+T+ A R++ +R + D Y I+I G CK+G+ + + L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M + F D IY +LI G G + L+ M+K I P F +++ +K
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE 627
+G E+ L +++ I + T + DK ++ L+ G +++
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 628 LIIFLSQSRKL-LEANKLLLFCLEKHHNIDIDMC--NTVIEGLCKMKKLSEAFGLYYELV 684
I ++ K L + L LF + D NT+I+G C++ KL A L+ E+V
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 685 EK 686
+
Sbjct: 450 SR 451
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 228/523 (43%), Gaps = 49/523 (9%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN LI+ + S+ F + +G P VVTFN+LL L R + A ++F M+
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 223 ST--------------YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVT 268
T G+ P TFN LI G C V + KM D+VT
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
Y T+V+G+C+ G K+A N++ M + + PDVV Y+ ++ C + +A +F E
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKM--EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
M++KG+ PN TYN +I G C + + +L +E +PD T N L++ G
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE-REINPDVLTFNALISASVKEG 380
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI-------- 440
L EA K+ ++M+ + PD+ TY+ ++ C F+ A+ ++D + +
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 441 -------------LLRDDGSTPLVA---AYKSMFQFLCKNGKTSKAERGFRQLMKRGT-Q 483
LLR+ LVA Y ++ C+ + A+ F++++ G
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
D + IL+ G C+ E EL ++ D D+ Y +I G+ + + A+
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE-GKIRQNVTLSTHTVRLLFS 602
+ + P T++ +++G K ++ L + + G N T +T +R
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT-LIRGCLK 619
Query: 603 NGLRDKGFRIVGLLYDNGYMVD-----MKELIIFLSQSRKLLE 640
G DK ++ + NG+ D M E II +++E
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIE 662
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 151/593 (25%), Positives = 254/593 (42%), Gaps = 91/593 (15%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
+++ F M + V N ++ + ++ R ++A S++ +M + + Y+FN
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFN 145
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
ILI+ FC + F K++ PD+VT+NTL+ G+C
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE---------------- 189
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
D +S L GY ++ EA+ +F++MV+ GL P +T+NTLI GLC +
Sbjct: 190 ------DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR-- 241
Query: 356 KIKEVLEGALEVG-----GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSA 410
VLE A V G D T T++NG C G+ AL + KM E ++PD
Sbjct: 242 ----VLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 411 TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA 470
YS ++ LC G A+ L+ E+L+KGI P V Y M C G+ S A
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGI-------APNVFTYNCMIDGFCSFGRWSDA 350
Query: 471 ERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
+R R +++R D ++ LI KEG +L ML R PD+ Y S+I G
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 530 LLQKGE--------PLLA-----------------------YQTLQKMLKSSIVPTTSTF 558
+ L+A Q L+++ + +V T+T+
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 559 HSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG-------FR 611
++++ G + + + L + I V T T +L ++ F
Sbjct: 471 NTLIHGFCEVDNLNAAQD----LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 612 IVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNI--DIDMCNTVIEGLCK 669
++ + + V +I + + K+ EA LFC H + D+ N +I G C
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD--LFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 670 MKKLSEAFGLYYELVEKGNHQPLSCLEN--LRVALEAGGRSKEVEFLSKRMPN 720
+S+A L++++ + G H+P + N +R L+AG K +E +S+ N
Sbjct: 585 KSAISDANVLFHKMKDNG-HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/542 (24%), Positives = 240/542 (44%), Gaps = 32/542 (5%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N +I + R ++ L+ M+ + ++ +FN L+ + + + S F + L+
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK-LT 168
Query: 224 TYGVAPDTYTFNILIRGFCKNS-----------MVDDGF----RFFQKMSSFNCDPDIVT 268
G PD TFN L+ G C MV+ GF F +M P ++T
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
+NTL++G+C G+V A +V MV K L+ DVV+Y T++ G C + AL + +
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKG--LHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
M + +KP+ V Y+ +I LC+ + + LE G +P+ T N +++G C+ G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFG 345
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
++A ++ M+E ++ PD T++ L+ G AEKL DE+L + I
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF------- 398
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELL 508
P Y SM CK+ + A+ F LM + D ++ +I +C+ + G +LL
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMF-DLM--ASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 509 VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
+ RR ++ Y +LI G + A Q+M+ + P T T + +L G +
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 569 GYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKEL 628
E+ L ++ KI + + + D+ + + L +G D++
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 629 IIFLSQ---SRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVE 685
+ +S + +AN L + H D NT+I G K ++ ++ L E+
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 686 KG 687
G
Sbjct: 636 NG 637
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN++I Y RA E ++L + G+ + T+N+L+ + N A+ +F EM+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S +GV PDT T NIL+ GFC+N +++ F+ + D D V YN ++ G+C+ KV
Sbjct: 495 S-HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 283 KTA---------HNV----------VKGMVKKS--EDLN------------PDVVSYTTL 309
A H V + G KS D N PD +Y TL
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
+RG ID+++ + EM G +A T + +C V + I+ L
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYL 665
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+ ++ + + G N +Y ++ NLN A++ LF + S+G + N
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD-LFQ-EMISHGVCP-DTITCN 506
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
L+ + +E+++LF ++ + V +N ++ + K + + A +F L
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPI 565
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+GV PD T+N++I GFC S + D F KM +PD TYNTL+ G +AG++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 285 AHNVVKGM 292
+ ++ M
Sbjct: 626 SIELISEM 633
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
+ L+ +N +I + E+ LF S+ GV P V T+N ++ + + A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
+F +M G PD T+N LIRG K +D +M S D T +
Sbjct: 593 VLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEI 651
Query: 276 VCRAGKVKTAHNVVK 290
+CR + N ++
Sbjct: 652 ICRVSDEEIIENYLR 666
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 242/522 (46%), Gaps = 44/522 (8%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N LI ++ E+++++ M G PS+ T++SL++ L KR + + EM
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM- 249
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
T G+ P+ YTF I IR + +++ + ++M C PD+VTY L+D +C A K+
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A V + M K+ PD V+Y TLL + +++D + EM G P+ VT+
Sbjct: 310 DCAKEVFEKM--KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L+ LC+ + + L+ + G P+ T NTL+ G L++AL++F M
Sbjct: 368 ILVDALCKAGNFGEAFDTLD-VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V+P + TY V + GD A + ++++ KGI P + A + L
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI-------APNIVACNASLYSLA 479
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K G+ +A++ F L G D +Y +++ + K G + +LL M+ +PD
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
+ SLI+ L + A++ +M + + PT T++++LAGL K G E+ + L
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA----IEL 595
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEA 641
EG +++ +T T LF L ++ ++ A
Sbjct: 596 FEGMVQKGCPPNTITFNTLFD----------------------------CLCKNDEVTLA 627
Query: 642 NKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYEL 683
K+L ++ D+ NT+I GL K ++ EA ++++
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 217/478 (45%), Gaps = 49/478 (10%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+L+ G+ G QE+++LF M G P+ +TFN+L L K +A + +M+
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G PD +T+N +I G KN V + FF +M PD VT TL+ GV +A +
Sbjct: 636 DM-GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLI 693
Query: 283 KTAHNVVKGMVKKSEDLNPDV------------------VSYT----------------- 307
+ A+ ++ + D ++ VS++
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV 753
Query: 308 TLLRGYCMKQNIDEALVVFEEMV-DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
++R C N+ A +FE+ D G++P TYN LI GL E I+ ++V ++
Sbjct: 754 PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFL-QVK 812
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
G PD T N L++ + +G ++E +++++M + + ++ T+++++ L G+ +
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT 486
A LY +L+ D +P Y + L K+G+ +A++ F ++ G +
Sbjct: 873 DALDLYYDLMS------DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 487 S-YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
+ Y ILI G K G +A L M++ PD + Y L+D L G ++
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSN 603
+ +S + P ++ I+ GL G +H +VL E K + +T +T L N
Sbjct: 987 LKESGLNPDVVCYNLIINGL---GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 148/578 (25%), Positives = 252/578 (43%), Gaps = 70/578 (12%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
I YG++G +++ F MK+ G++P++V N+ L L K GR AK +F L
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDI 497
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G+ PD+ T+N++++ + K +D+ + +M C+PD++ N+L++ + +A +V A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
+ M K L P VV+Y TLL G I EA+ +FE MV KG PN +T+NTL
Sbjct: 558 WKMFMRM--KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
LC+ ++ ++L +++G PD T NT++ G G + EA+ F +M + V
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCV-PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673
Query: 406 QPDSATYSVLVRNLCHIGDFERAEK-----LYDELLKKGILLRDD--GSTPLVAAYKSMF 458
PD T L+ + E A K LY+ + L +D GS A +
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 459 QF--------LCKNGKT-----------SKAERGFRQLMKRGTQD-------PTSYKILI 492
F +C++G + G R L ++ T+D PT Y +LI
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPT-YNLLI 792
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
G + E ++ + + PD Y L+D + G+ ++ ++M
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
T T + +++GL+K G ++ L+ + + D+ F
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALD-----------------------LYYDLMSDRDFSP 889
Query: 613 VGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKK 672
Y G ++D LS+S +L EA +L L+ + + N +I G K +
Sbjct: 890 TACTY--GPLIDG------LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 673 LSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKE 710
A L+ +V++G L L L GR E
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 174/358 (48%), Gaps = 13/358 (3%)
Query: 207 KRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDI 266
K + A+++F++ GV P T+N+LI G + M++ F ++ S C PD+
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 267 VTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEAL-VV 325
TYN L+D ++GK+ + K M + + + +++ ++ G N+D+AL +
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEM--STHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 326 FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
++ M D+ P A TY LI GL + ++ + K++ EG L+ G P+ N L+NG
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG-CRPNCAIYNILINGFG 937
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
AG + A +F++M++ V+PD TYSVLV LC +G + + EL ++
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-------KES 990
Query: 446 GSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL-MKRG-TQDPTSYKILIIGHCKEGTFEA 503
G P V Y + L K+ + +A F ++ RG T D +Y LI+ G E
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSI 561
++ + R +P+ + +LI G G+P AY Q M+ P T T+ +
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/524 (23%), Positives = 226/524 (43%), Gaps = 52/524 (9%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS------------ 152
+A++ F + Q G N ++ + + L + + +A LF +
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 153 -----NGTVKLEDRFFN--------------SLIRSYGRAGLFQESVKLFTS-MKSVGVS 192
NG VK FF+ +L+ +A L +++ K+ T+ + +
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 193 PSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI-LIRGFCKNSMVDDGF 251
P+ + + L+ +L + A S F E L G+ D + + +IR CK++ V
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVS-FSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 252 RFFQKMS-SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLL 310
F+K + P + TYN L+ G+ A ++ A +V + KS PDV +Y LL
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF--LQVKSTGCIPDVATYNFLL 827
Query: 311 RGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGF 370
Y IDE +++EM + N +T+N +I GL + +D ++ + F
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 371 SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEK 430
SP CT L++G +G L EA ++FE M+++ +P+ A Y++L+ G+ + A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYK 489
L+ ++K+G+ P + Y + LC G+ + F++L + G D Y
Sbjct: 948 LFKRMVKEGV-------RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 490 ILIIGHCKEGTFEAGYELLVLM----LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
++I G K E E LVL R PD Y SLI L G A + +
Sbjct: 1001 LIINGLGKSHRLE---EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQN 589
+ ++ + P TF++++ G G + ++ ++ G N
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 229/521 (43%), Gaps = 21/521 (4%)
Query: 176 FQESVKLFTSMKSVGVSPSVV----TFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDT 231
F ++ F+ KSV + ++V T N +L L G+ VFD M + DT
Sbjct: 95 FPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRI-IKRDT 153
Query: 232 YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKG 291
T+ + + + +KM F + +YN L+ + ++ A V +
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213
Query: 292 MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV 351
M+ E P + +Y++L+ G +++ID + + +EM GLKPN T+ I+ L
Sbjct: 214 MIL--EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
KI++ E+L+ ++ G PD T L++ C A L+ A +VFEKM + +PD T
Sbjct: 272 GKINEAYEILK-RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT 330
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
Y L+ D + ++ + E+ K DG P V + + LCK G +A
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEK-------DGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 472 RGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
+ +G + +Y LI G + + EL M P + Y ID
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 531 LQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE-GKIRQN 589
+ G+ + A +T +KM I P ++ L L K G E+ + L + G + +
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 590 VTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLL 646
VT + ++ G D+ +++ + +NG D+ LI L ++ ++ EA K+ +
Sbjct: 504 VTYNM-MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 647 FCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
E + NT++ GL K K+ EA L+ +V+KG
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/555 (22%), Positives = 244/555 (43%), Gaps = 21/555 (3%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N ++ + G +E +F M+ + T+ ++ L +G A +M
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM-R 180
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+G + Y++N LI K+ + +++M P + TY++L+ G+ GK +
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL---GKRR 237
Query: 284 TAHNVVKGMVKKSEDLN--PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+V+ G++K+ E L P+V ++T +R I+EA + + M D+G P+ VTY
Sbjct: 238 DIDSVM-GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
LI LC +K+D KEV E ++ G PD T TL++ + +L+ + + +M
Sbjct: 297 TVLIDALCTARKLDCAKEVFE-KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ PD T+++LV LC G+F A D ++RD G P + Y ++ L
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLD-------VMRDQGILPNLHTYNTLICGL 408
Query: 462 CKNGKTSKAERGFRQLMKRGTQDPTSYK--ILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
+ + A F + G + PT+Y + I + K G + E M + P+
Sbjct: 409 LRVHRLDDALELFGNMESLGVK-PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
+ + L + G A Q + +VP + T++ ++ K G E+ L+
Sbjct: 468 IVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYD---NGYMVDMKELIIFLSQSR 636
++E +V + + L+ D+ +++ + + +V L+ L ++
Sbjct: 528 EMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Query: 637 KLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLE 696
K+ EA +L ++K + NT+ + LCK +++ A + +++++ G +
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 697 NLRVALEAGGRSKEV 711
+ L G+ KE
Sbjct: 648 TIIFGLVKNGQVKEA 662
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 136/271 (50%), Gaps = 24/271 (8%)
Query: 119 THNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYG------- 171
THN +++ L +A N++ A + + + + DR F+ +YG
Sbjct: 857 THN-----IVISGLVKAGNVDDALDLYYDL---------MSDRDFSPTACTYGPLIDGLS 902
Query: 172 RAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDT 231
++G E+ +LF M G P+ +N L+ K G + A ++F M+ GV PD
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE-GVRPDL 961
Query: 232 YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKG 291
T+++L+ C VD+G +F+++ +PD+V YN +++G+ ++ +++ A +
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 292 MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV 351
M K S + PD+ +Y +L+ + ++EA ++ E+ GL+PN T+N LI+G
Sbjct: 1022 M-KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMN 382
K + V + + GGFSP+T T L N
Sbjct: 1081 GKPEHAYAVYQ-TMVTGGFSPNTGTYEQLPN 1110
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 222/489 (45%), Gaps = 58/489 (11%)
Query: 96 VLRLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFL--------- 145
+LR S+A+ FF W+ +G N +Y L+L IL ++ +A FL
Sbjct: 86 LLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSK 145
Query: 146 ------FSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFN 199
F + + + F+ L++ Y + GL +E ++F + G S SVVT N
Sbjct: 146 KEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCN 205
Query: 200 SLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSS 259
LL LLK V+ M G+ P+TYTFNIL FC +S + F +KM
Sbjct: 206 HLLNGLLKLDLMEDCWQVYSVMCRV-GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEE 264
Query: 260 FNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNI 319
+PD+VTYNTLV CR G++K A + K M ++ + PD+V+YT+L++G C +
Sbjct: 265 EGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRR--VVPDLVTYTSLIKGLCKDGRV 322
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
EA F MVD+G+KP+ ++YNTLI C+ + + K++L L PD T
Sbjct: 323 REAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLG-NSVVPDRFTCKV 381
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG---------------- 423
++ G G L A+ ++ KV L+ +LC G
Sbjct: 382 IVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEE 441
Query: 424 --------------DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSK 469
R + + + L+ KG L++ Y+++ LC+ G+ +
Sbjct: 442 GHEAKPETYNNLIESLSRCDAIEEALVLKG-KLKNQNQVLDAKTYRALIGCLCRIGRNRE 500
Query: 470 AERGFRQLMKRGTQDPTSY--KILIIGHCKEGTFEAGYELLVL--MLRRNFDPDSEIYQS 525
AE ++ + P S+ L+ G+CKE F+ LL L M R FDP+S Y S
Sbjct: 501 AESLMAEMFDSEVK-PDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPES--YNS 557
Query: 526 LIDGLLQKG 534
L+ + + G
Sbjct: 558 LVKAVCETG 566
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 167/445 (37%), Gaps = 99/445 (22%)
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
+V + +V +++ N D V + L++GY ++E VF E++D
Sbjct: 150 DVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLD--------------- 194
Query: 347 GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
GFS T N L+NG + + +V+ M +
Sbjct: 195 ---------------------SGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIH 233
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
P++ T+++L C+ +F D+ L+K + ++G P
Sbjct: 234 PNTYTFNILTNVFCNDSNFREV----DDFLEK---MEEEGFEP----------------- 269
Query: 467 TSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSL 526
D +Y L+ +C+ G + + L +M RR PD Y SL
Sbjct: 270 -----------------DLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 312
Query: 527 IDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKI 586
I GL + G A+QT +M+ I P ++++++ K+G +S LL +
Sbjct: 313 IKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKK----LLHEML 368
Query: 587 RQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE------------LIIFLSQ 634
+V T +++ +R+ LL ++V+++ LI+ L Q
Sbjct: 369 GNSVVPDRFTCKVIVEGFVREG-----RLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQ 423
Query: 635 SRKLLEANKLLLFCLEKH-HNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLS 693
K A LL +E+ H + N +IE L + + EA L +L +
Sbjct: 424 EGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAK 483
Query: 694 CLENLRVALEAGGRSKEVEFLSKRM 718
L L GR++E E L M
Sbjct: 484 TYRALIGCLCRIGRNREAESLMAEM 508
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 197/430 (45%), Gaps = 29/430 (6%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN LI+ + S+ F + +G P VVTFN+LL L R + A ++F M+
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 223 ST--------------YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVT 268
T G+ P TFN LI G C V + KM D+VT
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
Y T+V+G+C+ G K+A N++ M + + PDVV Y+ ++ C + +A +F E
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKM--EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
M++KG+ PN TYN +I G C + + +L +E +PD T N L++ G
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE-REINPDVLTFNALISASVKEG 380
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
L EA K+ ++M+ + PD+ TY+ ++ C F+ A+ ++D + ++
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-----------AS 429
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYEL 507
P V + ++ C+ + + + R++ +RG + T+Y LI G C+ A +L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M+ PD+ L+ G + + A + + + S I T ++ I+ G+ K
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 568 KGYAHESASL 577
E+ L
Sbjct: 550 GSKVDEAWDL 559
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 149/575 (25%), Positives = 249/575 (43%), Gaps = 91/575 (15%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
+ V N ++ + ++ R ++A S++ +M + + Y+FNILI+ FC +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
F K++ PD+VT+NTL+ G+C D +S L GY
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCL----------------------EDRISEALALFGY 201
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG----- 368
++ EA+ +F++MV+ GL P +T+NTLI GLC + VLE A V
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR------VLEAAALVNKMVGK 255
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G D T T++NG C G+ AL + KM E ++PD YS ++ LC G A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTS 487
+ L+ E+L+KGI P V Y M C G+ S A+R R +++R D +
Sbjct: 316 QYLFSEMLEKGI-------APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE--------PLLA 539
+ LI KEG +L ML R PD+ Y S+I G + L+A
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 540 -----------------------YQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESAS 576
Q L+++ + +V T+T+++++ G + + +
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 577 LVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG-------FRIVGLLYDNGYMVDMKELI 629
L + I V T T +L ++ F ++ + + V +I
Sbjct: 489 ----LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 630 IFLSQSRKLLEANKLLLFCLEKHHNI--DIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ + K+ EA LFC H + D+ N +I G C +S+A L++++ + G
Sbjct: 545 HGMCKGSKVDEAWD--LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 688 NHQPLSCLEN--LRVALEAGGRSKEVEFLSKRMPN 720
H+P + N +R L+AG K +E +S+ N
Sbjct: 603 -HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 43/405 (10%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ +++ + G + ++ L + M+ + P VV +++++ L K G + A+ +F EML
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+AP+ +T+N +I GFC D R + M +PD++T+N L+ + GK+
Sbjct: 324 EK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 283 -------------------KTAHNVVKGMVKKSE--------DL--NPDVVSYTTLLRGY 313
T ++++ G K + DL +PDVV++ T++ Y
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
C + +DE + + E+ +GL N TYNTLI G CEV ++ +++ + + G PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS-HGVCPD 501
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
T T N L+ G C L EAL++FE + K+ D+ Y++++ +C + A L+
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILI 492
L G+ P V Y M C S A F ++ G + D ++Y LI
Sbjct: 562 SLPIHGV-------EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDS---EIYQSLI-DGLLQK 533
G K G + EL+ M F D+ ++ LI DG L K
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDK 659
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/542 (24%), Positives = 240/542 (44%), Gaps = 32/542 (5%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N +I + R ++ L+ M+ + ++ +FN L+ + + + S F + L+
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK-LT 168
Query: 224 TYGVAPDTYTFNILIRGFCKNS-----------MVDDGF----RFFQKMSSFNCDPDIVT 268
G PD TFN L+ G C MV+ GF F +M P ++T
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
+NTL++G+C G+V A +V MV K L+ DVV+Y T++ G C + AL + +
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKG--LHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
M + +KP+ V Y+ +I LC+ + + LE G +P+ T N +++G C+ G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFG 345
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
++A ++ M+E ++ PD T++ L+ G AEKL DE+L + I
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF------- 398
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELL 508
P Y SM CK+ + A+ F LM + D ++ +I +C+ + G +LL
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMF-DLM--ASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 509 VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
+ RR ++ Y +LI G + A Q+M+ + P T T + +L G +
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 569 GYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKEL 628
E+ L ++ KI + + + D+ + + L +G D++
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 629 IIFLSQ---SRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVE 685
+ +S + +AN L + H D NT+I G K ++ ++ L E+
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 686 KG 687
G
Sbjct: 636 NG 637
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+ ++ + + G N +Y ++ NLN A++ LF + S+G + N
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD-LFQ-EMISHGVCP-DTITCN 506
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
L+ + +E+++LF ++ + V +N ++ + K + + A +F L
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPI 565
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+GV PD T+N++I GFC S + D F KM +PD TYNTL+ G +AG++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 285 AHNVVKGM 292
+ ++ M
Sbjct: 626 SIELISEM 633
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 203/423 (47%), Gaps = 15/423 (3%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
V RF+ + + +E + LF M PS+V F+ +L + K ++
Sbjct: 30 VPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVI 89
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
S+F M G+ D Y++NI+I C+ S KM F +PD+VT ++L++G
Sbjct: 90 SLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
C+ +V A ++V M + PDVV Y T++ G C +++A+ +F+ M G++
Sbjct: 149 FCQGNRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
+AVTYN+L+ GLC + ++ + + P+ T +++ G +EA+K
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMV-MRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
++E+M V PD TY+ L+ LC G + A+++ D ++ KG L P V Y
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL-------PDVVTYN 318
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
++ CK+ + + + FR++ +RG D +Y +I G+ + G +A E+ M R
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
P+ Y L+ GL A + M KS I +T++ ++ G+ K G ++
Sbjct: 379 ---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 575 ASL 577
L
Sbjct: 436 WDL 438
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 201/425 (47%), Gaps = 46/425 (10%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F+ ++ ++ + + LF M+ G+ + ++N ++ L + R +A SV +M+
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+G PD T + LI GFC+ + V D KM PD+V YNT++DG C+ G V
Sbjct: 132 K-FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 283 KTA-------------------HNVVKGMVKKS--------------EDLNPDVVSYTTL 309
A +++V G+ D+ P+V+++T +
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+ + + EA+ ++EEM + + P+ TYN+LI GLC ++D+ K++L+ + G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD-LMVTKG 309
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
PD T NTL+NG C + ++E K+F +M + + D+ TY+ +++ G + A+
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSY 488
+++ + S P + Y + LC N + KA F + K + D T+Y
Sbjct: 370 EIFSRM----------DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
I+I G CK G E ++L + + PD Y ++I G +K + + +KM +
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Query: 549 SSIVP 553
++P
Sbjct: 480 DGLLP 484
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 185/388 (47%), Gaps = 17/388 (4%)
Query: 207 KRGRTNMAKSV--FDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
KR N+ + + F +M+ + + P F+ ++ K+ D F M
Sbjct: 44 KRSSMNLEEEIDLFCKMIQSRPL-PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGH 102
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
D+ +YN +++ +CR + A +VV M+K + PDVV+ ++L+ G+C + +A+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYE--PDVVTVSSLINGFCQGNRVFDAID 160
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+ +M + G +P+ V YNT+I G C++ ++ E+ + +E G D T N+L+ G
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD-RMERDGVRADAVTYNSLVAGL 219
Query: 385 CNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
C +G ++A ++ M+ + P+ T++ ++ G F A KLY+E+ ++ +
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV---- 275
Query: 445 DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEA 503
P V Y S+ LC +G+ +A++ ++ +G D +Y LI G CK +
Sbjct: 276 ---DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
G +L M +R D+ Y ++I G Q G P A + +M P T+ +L
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLY 389
Query: 564 GLLKKGYAHESASLVVLLLEGKIRQNVT 591
GL ++ L + + +I ++T
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDIT 417
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 180/391 (46%), Gaps = 15/391 (3%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P +V ++ +L +N D + +F M G+ + +YN +I LC + I
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRF-VIALS 125
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
+ G + G+ PD T+++L+NG C + +A+ + KM E +PD Y+ ++ C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
IG A +L+D + + G+ R D T Y S+ LC +G+ S A R R ++ R
Sbjct: 186 KIGLVNDAVELFDRMERDGV--RADAVT-----YNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 481 G-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
+ ++ +I KEG F +L M RR DPD Y SLI+GL G A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 540 YQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE-GKIRQNVTLSTHTVR 598
Q L M+ +P T+++++ G K E L + + G + +T +T ++
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT-IIQ 357
Query: 599 LLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDID 658
F G D I + + L+ L + ++ +A L+LF + I++D
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA--LVLFENMQKSEIELD 415
Query: 659 MC--NTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ N VI G+CK+ + +A+ L+ L KG
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 151/393 (38%), Gaps = 79/393 (20%)
Query: 300 NPDVVSYTTLLRGYCMK-----QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
NP +V + + G N++E + +F +M+ P+ V ++ ++ + + +
Sbjct: 26 NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
D + + +EV G D + N ++N C AL V KMM++ +PD T S
Sbjct: 86 DLVISLFH-HMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSS 144
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ C +++D + LV+ + M GF
Sbjct: 145 LINGFCQ------GNRVFDAI-------------DLVSKMEEM---------------GF 170
Query: 475 RQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
R D Y +I G CK G EL M R D+ Y SL+ GL G
Sbjct: 171 RP-------DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
A + ++ M+ IVP TF +++ +K+G E+ L E R+ V
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK----LYEEMTRRCVDPDV 279
Query: 595 HTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHN 654
T L NGL G ++ EA ++L + K
Sbjct: 280 FTYNSLI-NGLCMHG---------------------------RVDEAKQMLDLMVTKGCL 311
Query: 655 IDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
D+ NT+I G CK K++ E L+ E+ ++G
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 197/405 (48%), Gaps = 19/405 (4%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF--F 163
+ F L +G +H+ S+ +++ R L++A + L + + + E F
Sbjct: 98 VISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMK-----LGFEPSIVTF 152
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
SL+ + F E++ L + +G P+VV +N+++ L ++G+ N A V M
Sbjct: 153 GSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM-K 211
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G+ PD T+N LI + R M PD++T++ L+D + G++
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A M+++S +NP++V+Y +L+ G C+ +DEA V +V KG PNAVTYNT
Sbjct: 272 EAKKQYNEMIQRS--VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
LI G C+ +++D ++L + G DT T NTL G+C AG + A KV +M+
Sbjct: 330 LINGYCKAKRVDDGMKIL-CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
V PD T+++L+ LC G +A ++L K ++ + Y + + LCK
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG-------IITYNIIIKGLCK 441
Query: 464 NGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYEL 507
K A F L +G + D +Y ++IG ++ + +EL
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 190/401 (47%), Gaps = 16/401 (3%)
Query: 172 RAGL----FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGV 227
R+GL F +++ LF M PS+V F+ LL+ + K + S+F L G+
Sbjct: 52 RSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRH-LEMLGI 110
Query: 228 APDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHN 287
+ D Y+F LI FC+ + + KM +P IVT+ +LV+G C + A +
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 288 VVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKG 347
+V +V + P+VV Y T++ C K ++ AL V + M G++P+ VTYN+LI
Sbjct: 171 LVDQIVGLGYE--PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 348 LCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQP 407
L +L + +G SPD T + L++ + G L EA K + +M++ V P
Sbjct: 229 LFHSGTWGVSARILSDMMRMG-ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 408 DSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKT 467
+ TY+ L+ LC G + A+K+ + L+ KG P Y ++ CK +
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF-------PNAVTYNTLINGYCKAKRV 340
Query: 468 SKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSL 526
+ + + G D +Y L G+C+ G F A ++L M+ PD + L
Sbjct: 341 DDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Query: 527 IDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
+DGL G+ A L+ + KS V T++ I+ GL K
Sbjct: 401 LDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 169/346 (48%), Gaps = 13/346 (3%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A+ + + +G+ N Y +++ L +N A + L +K+ ++ + +N
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG---IRPDVVTYN 223
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
SLI +G + S ++ + M +G+SP V+TF++L+ + K G+ AK ++EM+
Sbjct: 224 SLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR 283
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
V P+ T+N LI G C + ++D+ + + S P+ VTYNTL++G C+A +V
Sbjct: 284 -SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
++ V + ++ D +Y TL +GYC A V MV G+ P+ T+N L
Sbjct: 343 GMKIL--CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ GLC+ KI K LE L+ T N ++ G C A + +A +F +
Sbjct: 401 LDGLCDHGKIGKALVRLED-LQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
V PD TY ++ L + A +LY ++ K +DG P+
Sbjct: 460 VSPDVITYITMMIGLRRKRLWREAHELYRKMQK------EDGLMPI 499
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 220/475 (46%), Gaps = 43/475 (9%)
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
+D F M+ + P IV ++ L+ + + K + ++ + + + ++ D+ S+T
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL--EMLGISHDLYSFT 118
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
TL+ +C + AL +M+ G +P+ VT+ +L+ G C V + + +++ + +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
G + P+ NT+++ C G +N AL V + M + ++PD TY+ L+ L H G +
Sbjct: 179 G-YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 428 AEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPT 486
+ ++ ++++ GI +P V + ++ K G+ +A++ + ++++R +
Sbjct: 238 SARILSDMMRMGI-------SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
+Y LI G C G + ++L +++ + F P++ Y +LI+G + + L M
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Query: 547 LKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLR 606
+ + T T++++ G + G + ++ ++ + ++ +T +L +GL
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM----YTFNILL-DGLC 405
Query: 607 DKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEG 666
D G +I +V +++L Q K + + I N +I+G
Sbjct: 406 DHG-KI------GKALVRLEDL-----QKSKTV---------------VGIITYNIIIKG 438
Query: 667 LCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRMPNE 721
LCK K+ +A+ L+ L KG + + + L +E L ++M E
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 141/555 (25%), Positives = 250/555 (45%), Gaps = 68/555 (12%)
Query: 95 QVLRLI---KVPSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 150
++RLI K S AL+ F W GF H+ +Y + L R + L +
Sbjct: 45 HIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPD 104
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
+ +D F ++IR +GRA L + + + + G+ PS+ FNS+L +L+K
Sbjct: 105 SIG--LPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED- 161
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
++A+ F + G+ D YT+ IL++G + + DGF+ Q M + P+ V YN
Sbjct: 162 IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 221
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLN------------------------------ 300
TL+ +C+ GKV A +++ M K+ D+
Sbjct: 222 TLLHALCKNGKVGRARSLMSEM-KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFV 280
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
PDVV+ T ++ C + + EAL V E + KG K + V NTL+KG C + K+ ++ +
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKM-RVAQR 339
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
+E G+ P+ T N L+ G+C+ G L+ AL F M ++ + AT++ L+R L
Sbjct: 340 FFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 399
Query: 421 HIGDFERAEKLYDELLKKGIL--LRDDGSTPLVAA------YKSMFQFLCKNGK--TSKA 470
G + K+ + + + R D ++ ++ +FL K K
Sbjct: 400 IGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAV 459
Query: 471 ERGFR--QLMKRGTQDP--TSY---------KILIIGHC------KEGTFEAGYELLVLM 511
+R F+ L ++G D T+Y +I+ HC + G E EL+ M
Sbjct: 460 DRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
+ R + P S + ++I G ++ + + + ++ M + VP T +++ +L L KG
Sbjct: 520 VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 572 HESASLVVLLLEGKI 586
++ L ++E I
Sbjct: 580 QKAWLLFSRMVEKSI 594
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 234/521 (44%), Gaps = 57/521 (10%)
Query: 93 GFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS 152
GF RLIK + + + + + G + + + +L++L + ++++AR F F+ K +
Sbjct: 121 GFGRARLIK---RVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREF-FTRKMMA 175
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
+G + + + L++ + KL MK+ GV+P+ V +N+LL L K G+
Sbjct: 176 SG-IHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVG 234
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
A+S+ EM P+ TFNILI +C + +K S PD+VT +
Sbjct: 235 RARSLMSEMKE-----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKV 289
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK 332
++ +C G+V A V++ + K + DVV+ TL++GYC + A F EM K
Sbjct: 290 MEVLCNEGRVSEALEVLERVESKGGKV--DVVACNTLVKGYCALGKMRVAQRFFIEMERK 347
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
G PN TYN LI G C+V +D + ++ + T NTL+ G G ++
Sbjct: 348 GYLPNVETYNLLIAGYCDVGMLDSALDTFND-MKTDAIRWNFATFNTLIRGLSIGGRTDD 406
Query: 393 ALKVFEKMME------------------------W-----------KVQPDSATYSVLVR 417
LK+ E M + W K+ P + S +
Sbjct: 407 GLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLI 466
Query: 418 NLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL 477
+LC G + + YD+++ +G P + + ++GK ++ +
Sbjct: 467 SLCEKGGMDDLKTAYDQMIG-------EGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Query: 478 MKRGTQDPTS-YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEP 536
+ RG +S + +IIG CK+ G + + M R PD+E Y L++ L KG+
Sbjct: 520 VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 537 LLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
A+ +M++ SIVP S + S++ L +K H ++SL
Sbjct: 580 QKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/535 (20%), Positives = 206/535 (38%), Gaps = 98/535 (18%)
Query: 197 TFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQK 256
T+ +L L R + + DEM + G+ PD F +IRGF + ++
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 257 MSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMK 316
+S F P + +N+++D + +K
Sbjct: 138 VSKFGIKPSLKVFNSILDVL--------------------------------------VK 159
Query: 317 QNIDEALVVF-EEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTC 375
++ID A F +M+ G+ + TY L+KGL +I ++L+ ++ G +P+
Sbjct: 160 EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQ-IMKTSGVAPNAV 218
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE- 434
NTL++ C G + A + +M E P+ T+++L+ C+ +KL
Sbjct: 219 VYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCN------EQKLIQSM 268
Query: 435 -LLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILI 492
LL+K L G P V + + LC G+ S+A ++ +G + D + L+
Sbjct: 269 VLLEKCFSL---GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLV 325
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
G+C G + M R+ + P+ E Y LI G G A T M +I
Sbjct: 326 KGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIR 385
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRL------------- 599
+TF++++ GL G + ++ ++ + + + +
Sbjct: 386 WNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDAL 445
Query: 600 --------LFSNGLRDKGFRIVGLLYDNGYMVDMKE-------------------LIIFL 632
LF + D+ F+++ L + G M D+K LI
Sbjct: 446 EFLLKMEKLFPRAV-DRSFKLISLC-EKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRY 503
Query: 633 SQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
SQ K+ E+ +L+ + + + N VI G CK K+ ++ E+G
Sbjct: 504 SQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERG 558
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 134/357 (37%), Gaps = 16/357 (4%)
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME-WKVQPDSATYSVLVR 417
E A GF T L + C + ++ ++M + + PD A + ++R
Sbjct: 61 ETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIR 120
Query: 418 NLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL 477
+R + D + K GI P + + S+ L K E R++
Sbjct: 121 GFGRARLIKRVISVVDLVSKFGI-------KPSLKVFNSILDVLVKEDIDIAREFFTRKM 173
Query: 478 MKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEP 536
M G D +Y IL+ G G++LL +M P++ +Y +L+ L + G+
Sbjct: 174 MASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKV 233
Query: 537 LLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHT 596
A + +M + P TF+ +++ + +S L+ +V T
Sbjct: 234 GRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKV 289
Query: 597 VRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHH 653
+ +L + G + ++ + G VD+ L+ K+ A + + K +
Sbjct: 290 MEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGY 349
Query: 654 NIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKE 710
+++ N +I G C + L A + ++ + L L GGR+ +
Sbjct: 350 LPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDD 406
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/589 (22%), Positives = 264/589 (44%), Gaps = 20/589 (3%)
Query: 106 ALKFFNW-LPQMGFTH--NDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
AL+ F+W + Q + ++ +++ +LG+ ++ A N ++ L+
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDG---FSLDVYS 210
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ SLI ++ +G ++E+V +F M+ G P+++T+N +L + K G + E +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ G+APD YT+N LI + S+ + + F++M + D VTYN L+D ++ +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K A V+ MV +P +V+Y +L+ Y +DEA+ + +M +KG KP+ TY
Sbjct: 331 KEAMKVLNEMVLNG--FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TL+ G K++ + E + G P+ CT N + + N G E +K+F+++
Sbjct: 389 TLLSGFERAGKVESAMSIFE-EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD T++ L+ G ++ E+ + G + + L++AY
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS------- 500
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ G +A +R+++ G T D ++Y ++ + G +E ++L M P+
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y SL+ E L + +++ I P +++ K E+ L
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKL 638
E ++T V + + K ++ + + G+ M L+ S+S
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 639 LEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
++ ++L L K DI NTVI C+ ++ +A ++ E+ G
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 143/604 (23%), Positives = 281/604 (46%), Gaps = 27/604 (4%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSI--KRKSNGTVKLEDRF 162
+A+ F + + G +Y ++L + G+ + N + S+ K KS+G + +
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGK---MGTPWNKITSLVEKMKSDG-IAPDAYT 281
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+LI R L QE+ ++F MK+ G S VT+N+LL + K R A V +EM+
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G +P T+N LI + ++ M+D+ +M+ PD+ TY TL+ G RAGKV
Sbjct: 342 LN-GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
++A ++ + M ++ P++ ++ ++ Y + E + +F+E+ GL P+ VT+N
Sbjct: 401 ESAMSIFEEM--RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TL+ + ++ V + ++ GF P+ T NTL++ + G+ +A+ V+ +M++
Sbjct: 459 TLLAVFGQNGMDSEVSGVFK-EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V PD +TY+ ++ L G +E++EK+ E + D P Y S+
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAE-------MEDGRCKPNELTYCSLLHAYA 570
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTSY--KILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
NGK + + G +P + K L++ K + R F PD
Sbjct: 571 -NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
S++ ++ A L M + P+ +T++S++ + +S ++
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 581 LLEGKIRQNVTLSTHTVRLLFSNGLRDK-GFRIVGLLYDNGYMVDMKELIIFL---SQSR 636
+L I+ ++ +S +TV + R + RI + ++G + D+ F+ +
Sbjct: 690 ILAKGIKPDI-ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 637 KLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLE 696
EA ++ + ++ + + N++++G CK+ + EA +L H P E
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKG--E 806
Query: 697 NLRV 700
+LR+
Sbjct: 807 DLRL 810
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 192/446 (43%), Gaps = 54/446 (12%)
Query: 216 SVFDEMLSTYGVAPDTYTFNIL--IRGFCKNSMVD---DGFRFFQKMSSFNCDPDIVTYN 270
SV E+ + P++ + +L ++G + D F +F K + D
Sbjct: 118 SVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVA 177
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
++ + + G+V +A N+ G+ + + + DV SYT+L+ + EA+ VF++M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGL--QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 235
Query: 331 DKGLKPNAVTYNTLIKGLCEV-QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
+ G KP +TYN ++ ++ +KI ++E ++ G +PD T NTL+ C G+
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVE-KMKSDGIAPDAYTYNTLITC-CKRGS 293
Query: 390 LN-EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
L+ EA +VFE+M D TY+ L+ + A K+ +E++ G +
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF-------S 346
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYEL 507
P + Y S+ ++G +A Q+ ++GT+ D +Y L+ G + G E+ +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 508 LVLM---------------------------LRRNFD--------PDSEIYQSLIDGLLQ 532
M + + FD PD + +L+ Q
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 533 KGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTL 592
G ++M ++ VP TF+++++ + G ++ ++ +L+ + +++
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 593 STHTVRLLFSNGLRDKGFRIVGLLYD 618
+ L G+ ++ +++ + D
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMED 552
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 209/484 (43%), Gaps = 49/484 (10%)
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS 216
K+ D + R G + ++ +F + + G+ PS T N LL L++
Sbjct: 189 KMSDLLIEVYCTQFKRDGCYL-ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE 247
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV 276
FD + GV+PD Y F I FCK V++ + F KM P++VT+NT++DG+
Sbjct: 248 AFDVVCK--GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
G+ A + MV++ + P +++Y+ L++G + I +A V +EM KG P
Sbjct: 306 GMCGRYDEAFMFKEKMVERG--MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG-------- 388
N + YN LI E ++K E+ + + G S + T NTL+ G+C G
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 389 ---------NLNE------------------ALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
N+N+ AL+ +M+ + P + L+ LC
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 422 IGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG 481
G +A +L+ + L KG ++ S L+ LC+ GK +A R ++++ RG
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHG-------LCEAGKLDEAFRIQKEILGRG 535
Query: 482 -TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAY 540
D SY LI G C + + + L M++R PD+ Y LI GL + A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 541 QTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLL 600
Q ++ ++P T+ ++ G K E ++ ++ N + H +R
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 601 FSNG 604
+G
Sbjct: 656 CRSG 659
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 231/506 (45%), Gaps = 50/506 (9%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A F + + G +Y ++++ L RA+ + A F +K + +N
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA---YFVLKEMTKKGFPPNVIVYN 369
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+LI S+ AG +++++ M S G+S + T+N+L+ K G+ + A+ + EMLS
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP-------------------- 264
G + +F +I C + M D RF +M N P
Sbjct: 430 -GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 265 ---------------DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
D T N L+ G+C AGK+ A + K ++ + + D VSY TL
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM--DRVSYNTL 546
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+ G C K+ +DEA + +EMV +GLKP+ TY+ LI GL + K+++ + + + G
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC-KRNG 605
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
PD T + +++G C A E + F++MM VQP++ Y+ L+R C G A
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SY 488
+L +++ KGI +P A Y S+ + + + +A+ F ++ G + Y
Sbjct: 666 ELREDMKHKGI-------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
LI G+ K G LL M +N P+ Y +I G + G A + L +M +
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHES 574
IVP + T+ + G LK+G E+
Sbjct: 779 KGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 162/332 (48%), Gaps = 9/332 (2%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF- 162
SKAL+ + GF + ++ +L L A L+ A F I+++ G + DR
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA----FRIQKEILGRGCVMDRVS 542
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+LI E+ M G+ P T++ L+ L + A +D+
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD-C 601
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ PD YT++++I G CK ++G FF +M S N P+ V YN L+ CR+G++
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + + M K + ++P+ +YT+L++G + ++EA ++FEEM +GL+PN Y
Sbjct: 662 SMALELREDM--KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI G ++ ++ K+ E L + P+ T ++ G+ GN+ EA ++ +M E
Sbjct: 720 ALIDGYGKLGQMVKV-ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
+ PDS TY + G A K DE
Sbjct: 779 KGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 200/457 (43%), Gaps = 20/457 (4%)
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEAL 323
P T N L+ + RA + + + K ++PDV +TT + +C ++EA+
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK---GVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 324 VVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG 383
+F +M + G+ PN VT+NT+I GL + D+ E +E G P T + L+ G
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTLITYSILVKG 339
Query: 384 HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR 443
A + +A V ++M + P+ Y+ L+ + G +A ++ D ++ KG+ L
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 444 DDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFE 502
L+ Y CKNG+ AER ++++ G + S+ +I C F+
Sbjct: 400 SSTYNTLIKGY-------CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 503 AGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
+ + ML RN P + +LI GL + G+ A + + L V T T +++L
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 563 AGLLKKGYAHESASLVVLLL-EGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY 621
GL + G E+ + +L G + V+ +T L D+ F + + G
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL-DEAFMFLDEMVKRGL 571
Query: 622 MVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFG 678
D LI L K+ EA + C D+ + +I+G CK ++ E
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 679 LYYELVEKGNHQPLSCLEN--LRVALEAGGRSKEVEF 713
+ E++ K N QP + + N +R +G S +E
Sbjct: 632 FFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 170/386 (44%), Gaps = 16/386 (4%)
Query: 309 LLRGYCMKQNIDE---ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
L+ YC + D AL VF + +KG+ P+ T N L+ L + K E +
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 253
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
+ G SPD T +N C G + EA+K+F KM E V P+ T++ ++ L G +
Sbjct: 254 K--GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQD 484
+ A ++++++G+ P + Y + + L + + A +++ K+G +
Sbjct: 312 DEAFMFKEKMVERGM-------EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 485 PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
Y LI + G+ E+ LM+ + S Y +LI G + G+ A + L+
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 424
Query: 545 KMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNG 604
+ML +F S++ L + V +L + L T + L +G
Sbjct: 425 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Query: 605 LRDKGFRIVGLLYDNGYMVDMK---ELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCN 661
K + + G++VD + L+ L ++ KL EA ++ L + +D N
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 662 TVIEGLCKMKKLSEAFGLYYELVEKG 687
T+I G C KKL EAF E+V++G
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRG 570
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 185/364 (50%), Gaps = 18/364 (4%)
Query: 108 KFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
+FF W Q + H+ ++Y +M+E + R + + + ++++K V+ F +
Sbjct: 83 RFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVET----FCIV 138
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
+R Y RA E++ F M+ + P++V FN LL L K A+ VF+ M +
Sbjct: 139 MRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF- 197
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
PD+ T++IL+ G+ K + F++M C PDIVTY+ +VD +C+AG+V A
Sbjct: 198 -TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 256
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
+V+ M P Y+ L+ Y + ++EA+ F EM G+K + +N+LI
Sbjct: 257 GIVRSM--DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIG 314
Query: 347 GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
C+ ++ + VL+ ++ G +P++ + N ++ G +EA VF KM++ +
Sbjct: 315 AFCKANRMKNVYRVLK-EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCE 372
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
PD+ TY+++++ C + E A+K++ + KKG+ P + + + LC+
Sbjct: 373 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF-------PSMHTFSVLINGLCEERT 425
Query: 467 TSKA 470
T KA
Sbjct: 426 TQKA 429
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 164/336 (48%), Gaps = 11/336 (3%)
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
TF I++R + + VD+ F M ++ P++V +N L+ +C++ V+ A V + M
Sbjct: 134 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 193
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
+ PD +Y+ LL G+ + N+ +A VF EM+D G P+ VTY+ ++ LC+
Sbjct: 194 ---RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAG 250
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
++D+ ++ +++ P T + L++ + L EA+ F +M ++ D A +
Sbjct: 251 RVDEALGIVR-SMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 309
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
+ L+ C + ++ E+ KG+ TP + + + L + G+ +A
Sbjct: 310 NSLIGAFCKANRMKNVYRVLKEMKSKGV-------TPNSKSCNIILRHLIERGEKDEAFD 362
Query: 473 GFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ 532
FR+++K D +Y ++I C++ E ++ M ++ P + LI+GL +
Sbjct: 363 VFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCE 422
Query: 533 KGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
+ A L++M++ I P+ TF + L+K+
Sbjct: 423 ERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKE 458
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 130/255 (50%), Gaps = 9/255 (3%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF-F 163
KA + F + G + +Y +M++IL +A ++ A I R + ++ F +
Sbjct: 219 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA----LGIVRSMDPSICKPTTFIY 274
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+ L+ +YG +E+V F M+ G+ V FNSL+ K R V EM S
Sbjct: 275 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 334
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
GV P++ + NI++R + D+ F F+KM C+PD TY ++ C +++
Sbjct: 335 K-GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEME 392
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
TA V K M KK + P + +++ L+ G C ++ +A V+ EEM++ G++P+ VT+
Sbjct: 393 TADKVWKYMRKKG--VFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGR 450
Query: 344 LIKGLCEVQKIDKIK 358
L + L + ++ D +K
Sbjct: 451 LRQLLIKEEREDVLK 465
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 7/251 (2%)
Query: 118 FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQ 177
FT + ++Y ++LE G+ NL AR + + + ++ ++ +AG
Sbjct: 197 FTPDSKTYSILLEGWGKEPNLPKAREVF---REMIDAGCHPDIVTYSIMVDILCKAGRVD 253
Query: 178 ESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNIL 237
E++ + SM P+ ++ L+ R A F EM + G+ D FN L
Sbjct: 254 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERS-GMKADVAVFNSL 312
Query: 238 IRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSE 297
I FCK + + + +R ++M S P+ + N ++ + G+ A +V + M+K E
Sbjct: 313 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE 372
Query: 298 DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI 357
PD +YT +++ +C K+ ++ A V++ M KG+ P+ T++ LI GLCE + K
Sbjct: 373 ---PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKA 429
Query: 358 KEVLEGALEVG 368
+LE +E+G
Sbjct: 430 CVLLEEMIEMG 440
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 113/287 (39%), Gaps = 25/287 (8%)
Query: 411 TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA 470
T+ +++R + RA+K+ + + ++ + D P + A+ + LCK+ KA
Sbjct: 134 TFCIVMRK------YARAQKVDEAIYAFNVMEKYD-LPPNLVAFNGLLSALCKSKNVRKA 186
Query: 471 ERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
+ F + R T D +Y IL+ G KE E+ M+ PD Y ++D L
Sbjct: 187 QEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDIL 246
Query: 531 LQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
+ G A ++ M S PTT + ++ + E+ + + ++ +V
Sbjct: 247 CKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADV 306
Query: 591 TLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEA--------- 641
+ + +R++ + G + K I L R L+E
Sbjct: 307 AVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL---RHLIERGEKDEAFDV 363
Query: 642 -NKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
K++ C D D VI+ C+ K++ A ++ + +KG
Sbjct: 364 FRKMIKVC-----EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 405
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 203/437 (46%), Gaps = 15/437 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N L RS +AGL + ++F MKS GVSP+ L+ ++G+ + A ++ +L
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL---LL 162
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
++ V N L+ K V+D + F + F D T+N L+ G+C GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL-KPNAVTY 341
+ A ++ V PD+V+Y TL++G+C +++A +F+++ + P+ VTY
Sbjct: 223 EKALELLG--VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
++I G C+ K+ + +L+ L +G + P T N L++G+ AG + A ++ KM+
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIY-PTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ PD T++ L+ C +G + +L++E+ +G+ P Y + L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF-------PNAFTYSILINAL 392
Query: 462 CKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
C + KA QL + P Y +I G CK G ++ M ++ PD
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
+ LI G KG A KM+ P T S+L+ LLK G A E+ L +
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI 512
Query: 581 LLEGKIRQNVTLSTHTV 597
+G+ V L T T
Sbjct: 513 ARKGQSNNVVPLETKTA 529
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 11/326 (3%)
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
+ + FN LIR G +++++L M G P +VT+N+L+ K N A +F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
++ S +PD T+ +I G+CK + + M P VT+N LVDG +
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
AG++ TA + M+ S PDVV++T+L+ GYC + + ++EEM +G+ PNA
Sbjct: 325 AGEMLTAEEIRGKMI--SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
TY+ LI LC ++ K +E+L G L P N +++G C AG +NEA + E
Sbjct: 383 FTYSILINALCNENRLLKARELL-GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+M + K +PD T+++L+ C G A ++ +++ G +P S+
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI-------GCSPDKITVSSLL 494
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQD 484
L K G +A Q+ ++G +
Sbjct: 495 SCLLKAGMAKEAYH-LNQIARKGQSN 519
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 180/419 (42%), Gaps = 19/419 (4%)
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGA 364
+Y L R C D A +FE M G+ PN L+ E K+ +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 365 LEVGGFSPDTC-TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
EV G C +N+L+N + +A+K+F++ + ++ D+ T+++L+R LC +G
Sbjct: 165 FEVEG----CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT- 482
E+A +L ++ G P + Y ++ Q CK+ + +KA F+ + K G+
Sbjct: 221 KAEKALELLG-------VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSV 272
Query: 483 --QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAY 540
D +Y +I G+CK G LL MLR P + + L+DG + GE L A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 541 QTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLL 600
+ KM+ P TF S++ G + G + L + + N + + L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 601 FSNGLRDKGFRIVGLLYDNGYMVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
+ K ++G L + +I ++ K+ EAN ++ +K D
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSK 716
+I G C ++ EA +++++V G + +L L G +KE L++
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 203/437 (46%), Gaps = 15/437 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N L RS +AGL + ++F MKS GVSP+ L+ ++G+ + A ++ +L
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL---LL 162
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
++ V N L+ K V+D + F + F D T+N L+ G+C GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL-KPNAVTY 341
+ A ++ V PD+V+Y TL++G+C +++A +F+++ + P+ VTY
Sbjct: 223 EKALELLG--VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
++I G C+ K+ + +L+ L +G + P T N L++G+ AG + A ++ KM+
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIY-PTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ PD T++ L+ C +G + +L++E+ +G+ P Y + L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF-------PNAFTYSILINAL 392
Query: 462 CKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
C + KA QL + P Y +I G CK G ++ M ++ PD
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
+ LI G KG A KM+ P T S+L+ LLK G A E+ L +
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI 512
Query: 581 LLEGKIRQNVTLSTHTV 597
+G+ V L T T
Sbjct: 513 ARKGQSNNVVPLETKTA 529
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 11/326 (3%)
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
+ + FN LIR G +++++L M G P +VT+N+L+ K N A +F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
++ S +PD T+ +I G+CK + + M P VT+N LVDG +
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
AG++ TA + M+ S PDVV++T+L+ GYC + + ++EEM +G+ PNA
Sbjct: 325 AGEMLTAEEIRGKMI--SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
TY+ LI LC ++ K +E+L G L P N +++G C AG +NEA + E
Sbjct: 383 FTYSILINALCNENRLLKARELL-GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+M + K +PD T+++L+ C G A ++ +++ G +P S+
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI-------GCSPDKITVSSLL 494
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQD 484
L K G +A Q+ ++G +
Sbjct: 495 SCLLKAGMAKEAYH-LNQIARKGQSN 519
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 180/419 (42%), Gaps = 19/419 (4%)
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGA 364
+Y L R C D A +FE M G+ PN L+ E K+ +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 365 LEVGGFSPDTC-TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
EV G C +N+L+N + +A+K+F++ + ++ D+ T+++L+R LC +G
Sbjct: 165 FEVEG----CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT- 482
E+A +L ++ G P + Y ++ Q CK+ + +KA F+ + K G+
Sbjct: 221 KAEKALELLG-------VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSV 272
Query: 483 --QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAY 540
D +Y +I G+CK G LL MLR P + + L+DG + GE L A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 541 QTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLL 600
+ KM+ P TF S++ G + G + L + + N + + L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 601 FSNGLRDKGFRIVGLLYDNGYMVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
+ K ++G L + +I ++ K+ EAN ++ +K D
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSK 716
+I G C ++ EA +++++V G + +L L G +KE L++
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 170/336 (50%), Gaps = 7/336 (2%)
Query: 109 FFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIR 168
F+ + GF N + +++ + N++ A+ I ++S + FN+LI
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVS---FNTLIN 283
Query: 169 SYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVA 228
Y + G E +L M+ P V T+++L+ L K + + A +FDEM G+
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLI 342
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
P+ F LI G +N +D +QKM S PDIV YNTLV+G C+ G + A N+
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
V GM+++ L PD ++YTTL+ G+C +++ AL + +EM G++ + V ++ L+ G+
Sbjct: 403 VDGMIRRG--LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 349 CEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
C+ ++ + L L G PD T +M+ C G+ K+ ++M P
Sbjct: 461 CKEGRVIDAERALREMLR-AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
TY+VL+ LC +G + A+ L D +L G++ D
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDD 555
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 7/260 (2%)
Query: 160 DRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
D F +LI + R G + + M S G+ P +V +N+L+ K G A+++ D
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
M+ G+ PD T+ LI GFC+ V+ ++M + D V ++ LV G+C+
Sbjct: 405 GMIRR-GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
G+V A ++ M++ + PD V+YT ++ +C K + + +EM G P+ V
Sbjct: 464 GRVIDAERALREMLRAG--IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
TYN L+ GLC++ ++ +L+ L + G PD T NTL+ GH N + K + +
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNI-GVVPDDITYNTLLEGHHRHAN---SSKRYIQ 577
Query: 400 MMEWKVQPDSATYSVLVRNL 419
E + D A+Y +V L
Sbjct: 578 KPEIGIVADLASYKSIVNEL 597
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 9/298 (3%)
Query: 326 FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
+ E++D G N +N L+ C+ I ++V + + P + NTL+NG+C
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFD-EITKRSLQPTVVSFNTLINGYC 286
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
GNL+E ++ +M + + +PD TYS L+ LC + A L+DE+ K+G++ D
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 446 GSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAG 504
T L+ + +NG+ + +++++ +G Q D Y L+ G CK G A
Sbjct: 347 IFTTLIHGHS-------RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 505 YELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
++ M+RR PD Y +LIDG + G+ A + ++M ++ I F +++ G
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 565 LLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYM 622
+ K+G ++ + +L I+ + T + G GF+++ + +G++
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 12/413 (2%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
++L+R R +++ + M G P +T+N ++ L K+G A + ++M S
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM-S 201
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G PD T+N +IR + RF++ C P ++TY LV+ VCR
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A V++ M E PD+V+Y +L+ C + N++E V + ++ GL+ N VTYNT
Sbjct: 262 RAIEVLEDMA--VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L+ LC + D+++E+L + + P T N L+NG C A L+ A+ F +M+E
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQT-SYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 378
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
K PD TY+ ++ + E + D+ ++ LL++ P + Y S+ L K
Sbjct: 379 KCLPDIVTYNTVLGAM-------SKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 431
Query: 464 NGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
G KA + Q++ G D + + LI G C+ E ++L R
Sbjct: 432 KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST 491
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESA 575
Y+ +I GL +K E +A + ++ ML P + + +I+ G+ + G E+
Sbjct: 492 YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 12/373 (3%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N +I + + G + ++ L M G P V+T+N+++ + G A + + L
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQL 236
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G P T+ +L+ C+ + M+ C PDIVTYN+LV+ CR G +
Sbjct: 237 QN-GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ +V++ ++ +LN V+Y TLL C + DE + M P +TYN
Sbjct: 296 EEVASVIQHILSHGLELN--TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYN 353
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI GLC+ + + + + LE PD T NT++ G +++A+++ +
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKCL-PDIVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
P TY+ ++ L G ++A +LY ++L GI D +S+ C
Sbjct: 413 TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD-------ITRRSLIYGFC 465
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ +A + ++ RG ++Y+++I G CK+ E E++ +ML PD
Sbjct: 466 RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDET 525
Query: 522 IYQSLIDGLLQKG 534
IY +++ G+ + G
Sbjct: 526 IYTAIVKGVEEMG 538
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 183/384 (47%), Gaps = 14/384 (3%)
Query: 197 TFNSLLLILLKRGR-TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQ 255
T N +L L G+ T+ K V E+++ + P + + L+RG + +D +
Sbjct: 106 TNNEILHNLCSNGKLTDACKLV--EVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILR 163
Query: 256 KMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCM 315
M PD +TYN ++ +C+ G ++TA +++ M PDV++Y T++R
Sbjct: 164 VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSP--PDVITYNTVIRCMFD 221
Query: 316 KQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTC 375
N ++A+ +++ + G P +TY L++ +C + EVLE + V G PD
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED-MAVEGCYPDIV 280
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
T N+L+N +C GNL E V + ++ ++ ++ TY+ L+ +LC + + +DE+
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC-------SHEYWDEV 333
Query: 436 LKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIG 494
+ ++ P V Y + LCK S+A F Q++ ++ D +Y ++
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 495 HCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPT 554
KEG + ELL L+ P Y S+IDGL +KG A + +ML + I P
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 555 TSTFHSILAGLLKKGYAHESASLV 578
T S++ G + E+ ++
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVL 477
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 192/428 (44%), Gaps = 15/428 (3%)
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
T N ++ +C GK+ A +V+ M + ++ P S + L+RG +D+A+ +
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQ--VPHFPSCSNLVRGLARIDQLDKAMCILR 163
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
MV G P+ +TYN +I LC+ I +LE + + G PD T NT++ +
Sbjct: 164 VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLED-MSLSGSPPDVITYNTVIRCMFDY 222
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
GN +A++ ++ ++ P TY+VLV +C RA ++ +++ +G
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV-------EGC 275
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYE 506
P + Y S+ + C+ G + + ++ G + + +Y L+ C ++ E
Sbjct: 276 YPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEE 335
Query: 507 LLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLL 566
+L +M + ++ P Y LI+GL + A +ML+ +P T++++L +
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395
Query: 567 KKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD-- 624
K+G ++ L+ LL + + L GL K + + D G D
Sbjct: 396 KEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDI 455
Query: 625 -MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYEL 683
+ LI ++ + EA ++L + + I VI+GLCK K++ A + E+
Sbjct: 456 TRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV-VEI 514
Query: 684 VEKGNHQP 691
+ G +P
Sbjct: 515 MLTGGCKP 522
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 108 KFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF-FNSL 166
+ N + Q + +Y +++ L +AR L+ A +F + + + L D +N++
Sbjct: 335 EILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK----CLPDIVTYNTV 390
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
+ + + G+ ++++L +K+ P ++T+NS++ L K+G A ++ +ML G
Sbjct: 391 LGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDA-G 449
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
+ PD T LI GFC+ ++V++ + ++ S+ TY ++ G+C+ +++ A
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRG 312
VV+ M+ PD YT +++G
Sbjct: 510 EVVEIMLTGG--CKPDETIYTAIVKG 533
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 226/515 (43%), Gaps = 66/515 (12%)
Query: 103 PSKALKFFNWLPQMGFT-HNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKL--- 158
PS + FF W + + H+ QS + M+ IL + ++ A L + ++ + L
Sbjct: 60 PSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119
Query: 159 ----------ED--RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILL 206
ED F+ L+ Y +AG+ +S+ +F ++S G+ P + LL L+
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179
Query: 207 KRGRTNMAKSVFDEM----------------------------------LSTYGVAPDTY 232
K+ T+ +F +M + GV PD +
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
T+N LI +CK SM + +M P+IVTYN+ + G R G+++ A + + +
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
+D+ + V+YTTL+ GYC +IDEAL + E M +G P VTYN++++ LCE
Sbjct: 300 ---KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Query: 353 KIDKIKEVLEGALEVGG--FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSA 410
+I + +L E+ G PD T NTL+N +C ++ A+KV +KM+E ++ D
Sbjct: 357 RIREANRLLT---EMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMY 413
Query: 411 TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA 470
+Y L+ C + + E A++ +++KG +P A Y + K +
Sbjct: 414 SYKALIHGFCKVLELENAKEELFSMIEKGF-------SPGYATYSWLVDGFYNQNKQDEI 466
Query: 471 ERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
+ + KRG D Y+ LI CK + L M ++ DS I+ ++
Sbjct: 467 TKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYA 526
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
+ G+ A M ++ + SI A
Sbjct: 527 YWRTGKVTEASALFDVMYNRRLMVNLKLYKSISAS 561
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 12/274 (4%)
Query: 296 SEDLNPDVVS--YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
SED P+ VS ++ L+ Y I++++VVFE++ GLKP+ L+ L + +
Sbjct: 126 SED--PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRL 183
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
D + ++ + +++G + + N L++ +G+ +A K+ +M E V PD TY+
Sbjct: 184 TDTVWKIFKKMVKLGVVA-NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYN 242
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERG 473
L+ C A + D + + G+ P + Y S + G+ +A R
Sbjct: 243 TLISVYCKKSMHFEALSVQDRMERSGV-------APNIVTYNSFIHGFSREGRMREATRL 295
Query: 474 FRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
FR++ T + +Y LI G+C+ + L +M R F P Y S++ L +
Sbjct: 296 FREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCED 355
Query: 534 GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
G A + L +M I P T ++++ K
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 219/466 (46%), Gaps = 35/466 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+++LI Y +AG+ KLF+ GV VV F+S + + +K G A V+ ML
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G++P+ T+ ILI+G C++ + + F + ++ +P IVTY++L+DG C+ G +
Sbjct: 384 CQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
++ + + M+K PDVV Y L+ G + + A+ +M+ + ++ N V +N
Sbjct: 443 RSGFALYEDMIKMG--YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+LI G C + + D+ +V + + G PD T T+M G L EAL +F +M +
Sbjct: 501 SLIDGWCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 403 WKVQPDSATYSVLVRNLCH-----IG----DFERAEKLYDELLKKGILLR--------DD 445
++PD+ Y L+ C IG D + K+ ++ +++ +D
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 446 GS-----------TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIG 494
S P + Y +M C + +AER F +L+K P + + I+
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILI 678
Query: 495 H--CKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
H CK + + +M + P++ Y L+D + + +++ ++M + I
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVR 598
P+ ++ I+ GL K+G E+ ++ ++ K+ +V +R
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 213/468 (45%), Gaps = 18/468 (3%)
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G AP+ TF LI GFCK +D F F+ M +PD++ Y+TL+DG +AG +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
H + + K L DVV +++ + Y ++ A VV++ M+ +G+ PN VTY LI
Sbjct: 341 HKLFSQALHKGVKL--DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
KGLC+ +I + + G + G P T ++L++G C GNL ++E M++
Sbjct: 399 KGLCQDGRIYEAFG-MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
PD Y VLV L G A + ++L + I L V + S+ C+
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN-------VVVFNSLIDGWCRLN 510
Query: 466 KTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
+ +A + FR + G + D ++ ++ EG E L M + +PD+ Y
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEG 584
+LID + +P + Q M ++ I + + ++ L K +++ L+EG
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 585 KIRQNVTLSTHTVRLLFSNGLR--DKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLL 639
K+ ++ T+ + LR D+ RI LL + V + LI L ++ +
Sbjct: 631 KMEPDIV--TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 640 EANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
A ++ EK + +++ K + +F L+ E+ EKG
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 240/509 (47%), Gaps = 15/509 (2%)
Query: 181 KLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRG 240
+L + + G +P+VVTF +L+ KRG + A +F +++ G+ PD ++ LI G
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF-KVMEQRGIEPDLIAYSTLIDG 330
Query: 241 FCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLN 300
+ K M+ G + F + D+V +++ +D ++G + TA V K M+ + ++
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML--CQGIS 388
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P+VV+YT L++G C I EA ++ +++ +G++P+ VTY++LI G C+ + +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
E +++ G+ PD L++G G + A++ KM+ ++ + ++ L+ C
Sbjct: 449 YEDMIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
+ F+ A K++ + GI P VA + ++ + G+ +A F ++ K
Sbjct: 508 RLNRFDEALKVFRLMGIYGI-------KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 481 GTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
G + D +Y LI CK G +L LM R D + +I L + A
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 540 YQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRL 599
+ +++ + P T+++++ G E+ + LL N T + +
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 600 LFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNID 656
L N D R+ ++ + G V L+ + S+S + + KL EK +
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 657 IDMCNTVIEGLCKMKKLSEAFGLYYELVE 685
I + +I+GLCK ++ EA ++++ ++
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 221/518 (42%), Gaps = 81/518 (15%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A F + Q G + +Y +++ +A L + LFS + + VKL+ F+
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK-LFS--QALHKGVKLDVVVFS 360
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
S I Y ++G + ++ M G+SP+VVT+ L+ L + GR A ++ ++L
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G+ P T++ LI GFCK + GF ++ M PD+V Y LVDG+ + G +
Sbjct: 421 -GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 285 AHNVVKGMVKKSEDLN---------------------------------PDVVSYTTLLR 311
A M+ +S LN PDV ++TT++R
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE--------------------- 350
M+ ++EAL +F M GL+P+A+ Y TLI C+
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 351 --------------VQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
+I+ + +E G PD T NT++ G+C+ L+EA ++
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIE-GKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
FE + P++ T ++L+ LC D + A +++ + +KG S P Y
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-------SKPNAVTYGC 711
Query: 457 MFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
+ + K+ + + F ++ ++G + SY I+I G CK G + + +
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
PD Y LI G + G + A + ML++ + P
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 147/564 (26%), Positives = 248/564 (43%), Gaps = 62/564 (10%)
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGV--------- 227
++K F + G PS F ++ +L++ G ++A VFDEM++ G
Sbjct: 84 NSALKYFRWAEISGKDPS---FYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140
Query: 228 --APDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNC-DPDIVTY---NTLV-------- 273
+ D L+ C+ MVD F + P Y N+L+
Sbjct: 141 DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLI 200
Query: 274 ----DGVCRAG---KVKTAHNVV------KGMVKKSEDLN---------PDVVSYTTLLR 311
D +CR G +AH V KG V K+ D + +VS +L+
Sbjct: 201 ADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLK 260
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFS 371
G + Q I+ A + ++D G PN VT+ TLI G C+ ++D+ ++ + +E G
Sbjct: 261 GLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK-VMEQRGIE 318
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKL 431
PD +TL++G+ AG L K+F + + V+ D +S + GD A +
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 432 YDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP-TSYKI 490
Y +L +GI +P V Y + + LC++G+ +A + Q++KRG + +Y
Sbjct: 379 YKRMLCQGI-------SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 491 LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSS 550
LI G CK G +G+ L M++ + PD IY L+DGL ++G L A + KML S
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 551 IVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
I F+S++ G + E+ + L+ I+ +V T +R+ G ++
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 611 RIVGLLYDNGYMVDMKELIIFLSQSRKLLEAN-KLLLFCLEKHHNI--DIDMCNTVIEGL 667
+ ++ G D + K ++ L LF L + + I DI +CN VI L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 668 CKMKKLSEAFGLYYELVEKGNHQP 691
K ++ +A + L+E G +P
Sbjct: 612 FKCHRIEDASKFFNNLIE-GKMEP 634
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/608 (22%), Positives = 268/608 (44%), Gaps = 47/608 (7%)
Query: 92 TGFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVAR--------- 142
T +L L P+ ALK+F W G D S++ + +L R +VA
Sbjct: 72 TNLVLLSLESEPNSALKYFRWAEISG---KDPSFYTIAHVLIRNGMFDVADKVFDEMITN 128
Query: 143 -----NFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVT 197
N L SI+ +S L+ L+ R G+ +++++F +GV +
Sbjct: 129 RGKDFNVLGSIRDRS-----LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDS 183
Query: 198 FNSLLLILLKRGRTNMAKSVFDEM----LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
+L L+ R ++ FD++ + GV+ + + L FCK V F
Sbjct: 184 VYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDAL---FCKGE-VTKALDF 239
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
+ + IV+ N ++ G+ +++ A ++ ++ P+VV++ TL+ G+
Sbjct: 240 HRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGP--APNVVTFCTLINGF 296
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
C + +D A +F+ M +G++P+ + Y+TLI G + + ++ AL G D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH-KGVKLD 355
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
++ ++ + +G+L A V+++M+ + P+ TY++L++ LC G A +Y
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILI 492
++LK+G+ P + Y S+ CK G + ++K G D Y +L+
Sbjct: 416 QILKRGM-------EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
G K+G V ML ++ + ++ SLIDG + A + + M I
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDK-GFR 611
P +TF +++ + +G E+ L + + + + L+ T+ F ++ G +
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD-ALAYCTLIDAFCKHMKPTIGLQ 587
Query: 612 IVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLC 668
+ L+ N D+ +I L + ++ +A+K +E DI NT+I G C
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 669 KMKKLSEA 676
+++L EA
Sbjct: 648 SLRRLDEA 655
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 138/333 (41%), Gaps = 75/333 (22%)
Query: 146 FSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLIL 205
FS+K +++L FNSLI + R F E++K+F M G+ P V TF +++ +
Sbjct: 483 FSVKMLGQ-SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 206 LKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKN--------------------- 244
+ GR A +F M G+ PD + LI FCK+
Sbjct: 542 IMEGRLEEALFLFFRMFKM-GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 245 --------------SMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVK 290
++D +FF + +PDIVTYNT++ G C ++ A + +
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 291 GMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL------ 344
+ K P+ V+ T L+ C ++D A+ +F M +KG KPNAVTY L
Sbjct: 661 --LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 345 -----------------------------IKGLCEVQKIDKIKEVLEGALEVGGFSPDTC 375
I GLC+ ++D+ + A++ PD
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID-AKLLPDVV 777
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
L+ G+C G L EA ++E M+ V+PD
Sbjct: 778 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 119/235 (50%), Gaps = 6/235 (2%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
P+ L+ F+ + + + + +++ +L + + A F ++ G ++ +
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL---IEGKMEPDIVT 638
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N++I Y E+ ++F +K P+ VT L+ +L K + A +F ++
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIM 697
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ G P+ T+ L+ F K+ ++ F+ F++M P IV+Y+ ++DG+C+ G+V
Sbjct: 698 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPN 337
A N+ + L PDVV+Y L+RGYC + EA +++E M+ G+KP+
Sbjct: 758 DEATNIFHQAIDAK--LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 190/426 (44%), Gaps = 55/426 (12%)
Query: 158 LEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSV 217
LE FN+L+ GR L M V + P VVT L+ L K R + A V
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 218 FDEMLSTYG-----VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS-SFNCDPDIVTYNT 271
F++M + D+ FN LI G CK + + +M C P+ VTYN
Sbjct: 352 FEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNC 411
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
L+DG CRAGK++TA VV M K +++ P+VV+ T++ G C ++ A+V F +M
Sbjct: 412 LIDGYCRAGKLETAKEVVSRM--KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
+G+K N VTY TLI C V ++K E LE G SPD L++G C +
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCSPDAKIYYALISGLCQVRRDH 528
Query: 392 EALKVFEKMMEW-----------------------KV------------QPDSATYSVLV 416
+A++V EK+ E KV +PDS TY+ L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
DFE E++ +++ R+DG P V Y ++ C G+ +A + F+
Sbjct: 589 SFFGKHKDFESVERMMEQM-------REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 477 LMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK- 533
+ +P + Y ILI K G F L M + P+ E Y +L L +K
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT 701
Query: 534 -GEPLL 538
GE LL
Sbjct: 702 QGETLL 707
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 191/453 (42%), Gaps = 51/453 (11%)
Query: 180 VKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSV---------------FDEMLST 224
+ L + S GVSP+ V + L K R N A + F+ +LS
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 225 YG-------------------VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD-- 263
G + PD T ILI CK+ VD+ F++M D
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 264 ----PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNI 319
D + +NTL+DG+C+ G++K A ++ M K E P+ V+Y L+ GYC +
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERCVPNAVTYNCLIDGYCRAGKL 422
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
+ A V M + +KPN VT NT++ G+C ++ + V +E G + T T
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN-MAVVFFMDMEKEGVKGNVVTYMT 481
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
L++ C+ N+ +A+ +EKM+E PD+ Y L+ LC + A ++ ++L + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKE 498
L + AY + C K + K G + D +Y LI K
Sbjct: 542 FSLD-------LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 499 GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM-LKSSIVPTTST 557
FE+ ++ M DP Y ++ID GE A + + M L S + P T
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
++ ++ K G ++ SL + +R NV
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 203/495 (41%), Gaps = 97/495 (19%)
Query: 166 LIRSYGRAGLFQESV----KLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
LIR +GR G+ +SV +L ++MK+ V VV +LL+ G + A V DEM
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVD------VLLRNGLVDDAFKVLDEM 211
Query: 222 L--------------------------------------STYGVAPDTYTFNILIRGFCK 243
L S++GV+P++ I CK
Sbjct: 212 LQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 271
Query: 244 NSMVDDGFRFFQ-----------------------------------KMSSFNCDPDIVT 268
N+ + + KM PD+VT
Sbjct: 272 NARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 331
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSED----LNPDVVSYTTLLRGYCMKQNIDEALV 324
L++ +C++ +V A V + M K D + D + + TL+ G C + EA
Sbjct: 332 LGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 391
Query: 325 VFEEM-VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG 383
+ M +++ PNAVTYN LI G C K++ KEV+ E P+ T+NT++ G
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE-DEIKPNVVTVNTIVGG 450
Query: 384 HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR 443
C LN A+ F M + V+ + TY L+ C + + E+A Y+++L+
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA----- 505
Query: 444 DDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFE 502
G +P Y ++ LC+ + A R +L + G + D +Y +LI C + E
Sbjct: 506 --GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 503 AGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
YE+L M + PDS Y +LI + + + +++M + + PT +T+ +++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 563 AGLLKKGYAHESASL 577
G E+ L
Sbjct: 624 DAYCSVGELDEALKL 638
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 142/321 (44%), Gaps = 40/321 (12%)
Query: 156 VKLEDRF------FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
+KLE+R +N LI Y RAG + + ++ + MK + P+VVT N+++ + +
Sbjct: 396 MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
NMA F +M GV + T+ LI C S V+ +++KM C PD Y
Sbjct: 456 GLNMAVVFFMDM-EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVK---------------------------------KS 296
L+ G+C+ + A VV+ + + +
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
E PD ++Y TL+ + ++ + + E+M + GL P TY +I C V ++D+
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
++ + +P+T N L+N GN +AL + E+M V+P+ TY+ L
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 417 RNLCHIGDFERAEKLYDELLK 437
+ L E KL DE+++
Sbjct: 695 KCLNEKTQGETLLKLMDEMVE 715
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 218/475 (45%), Gaps = 50/475 (10%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
P +A F L + G + SY +L + + + + +++ +GT KL+ F
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ--SGT-KLDSIF 117
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN++I ++ +G +++V+ MK +G++P+ T+N+L+ G+ + + D ML
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 223 --STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
V P+ TFN+L++ +CK V++ + +KM PD VTYNT+ + G
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 281 K-VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
+ V+ VV+ MV K E P+ + ++ GYC + + + L M + ++ N V
Sbjct: 238 ETVRAESEVVEKMVMK-EKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
+N+LI G EV D I EVL E D T +T+MN +AG + +A +VF++
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVLTLMKEC-NVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M++ V+PD+ YS+L + + ++AE+L + L+ + S P V + ++
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE--------SRPNVVIFTTVIS 407
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
C NG A R F ++ K G P+
Sbjct: 408 GWCSNGSMDDAMRVFNKMCKFG----------------------------------VSPN 433
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
+ +++L+ G L+ +P A + LQ M + P STF + G ES
Sbjct: 434 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 488
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 192/413 (46%), Gaps = 49/413 (11%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLST----------------------------- 224
+V + L+ +L++RGR + A++VF + T
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 225 -----YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
G D+ FN +I F ++ ++D + KM +P TYNTL+ G A
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 280 GKVKTAHNVVKGMVKKSE-DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
GK + + ++ M+++ D+ P++ ++ L++ +C K+ ++EA V ++M + G++P+
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 339 VTYNTLIKGLCEVQKIDKIK---EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
VTYNT+ C VQK + ++ EV+E + P+ T ++ G+C G + + L+
Sbjct: 224 VTYNTI--ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
+M E +V+ + ++ L+ + D + DE+L L+++ V Y
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDG----IDEVL---TLMKECNVKADVITYS 334
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
++ G KA + F++++K G + D +Y IL G+ + + ELL ++
Sbjct: 335 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 394
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
+ P+ I+ ++I G G A + KM K + P TF +++ G L+
Sbjct: 395 S-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 446
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 167/362 (46%), Gaps = 36/362 (9%)
Query: 113 LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGR 172
+ ++G +Y +++ G A + L + + N V R FN L++++ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 173 AGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS-VFDEMLSTYGVAPDT 231
+E+ ++ M+ GV P VT+N++ +++G T A+S V ++M+ P+
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 232 YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKG 291
T I++ G+C+ V DG RF ++M + ++V +N+L++G V+
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL 320
Query: 292 MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV 351
M K ++ DV++Y+T++ + +++A VF+EMV G+KP+A Y+ L KG
Sbjct: 321 M--KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 378
Query: 352 QKIDKIKEVLE-----------------------GALEVG----------GFSPDTCTLN 378
++ K +E+LE G+++ G SP+ T
Sbjct: 379 KEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 438
Query: 379 TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
TLM G+ +A +V + M V+P+++T+ +L G + + K + L K
Sbjct: 439 TLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK 498
Query: 439 GI 440
I
Sbjct: 499 DI 500
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 176/401 (43%), Gaps = 10/401 (2%)
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
V S T L+ + EA VF+ + + G +P+ ++Y TL+ + ++ I ++
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV- 103
Query: 363 GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHI 422
+E G D+ N ++N +GN+ +A++ KM E + P ++TY+ L++
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 423 GDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT 482
G ER+ +L D +L++G + D G P + + + Q CK K +A +++ + G
Sbjct: 164 GKPERSSELLDLMLEEGNV--DVG--PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGV 219
Query: 483 Q-DPTSYKILIIGHCKEG-TFEAGYELLVLM-LRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
+ D +Y + + ++G T A E++ M ++ P+ ++ G ++G
Sbjct: 220 RPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDG 279
Query: 540 YQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRL 599
+ +++M + + F+S++ G ++ ++ L+ E ++ +V + +
Sbjct: 280 LRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNA 339
Query: 600 LFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKL--LLFCLEKHHNIDI 657
S G +K ++ + G D I + E K LL L ++
Sbjct: 340 WSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV 399
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENL 698
+ TVI G C + +A ++ ++ + G + E L
Sbjct: 400 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 234/495 (47%), Gaps = 26/495 (5%)
Query: 103 PSKALKFFNW-LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR-KSNGTVKLED 160
P A FF W Q +THN + Y ++++L A++++ R IK+ + TV
Sbjct: 132 PDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAA- 190
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
N+LI+S+G+ G+ +E + ++ MK G+ P++ T+N L+ L+ + A+ VF E
Sbjct: 191 ---NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-E 246
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
++ + + PD T+N +I+G+CK + M + + D +TY T++
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ + + M +K + P +++ ++ G C + ++E VFE M+ KG KPN
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPH--AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y LI G + ++ +L ++ GF PD T + ++NG C G + EAL F
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMID-EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
+ +S YS L+ L G + AE+L++E+ +KG RD Y ++
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC-TRDS------YCYNALIDA 476
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
K+ K +A F+++ + D T +Y IL+ G KE E +L +M+ + P
Sbjct: 477 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
+ +++L GL G+ A + L ++ ++ + ++ L K G E+ L
Sbjct: 537 TAACFRALSTGLCLSGKVARACKILDELAPMGVI-LDAACEDMINTLCKAGRIKEACKLA 595
Query: 579 VLLLE------GKIR 587
+ E G+IR
Sbjct: 596 DGITERGREVPGRIR 610
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 155/318 (48%), Gaps = 11/318 (3%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFN 235
F V L+ M G+ F+ ++ L K G+ N +VF+ M+ G P+ +
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK-GSKPNVAIYT 366
Query: 236 ILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
+LI G+ K+ V+D R +M PD+VTY+ +V+G+C+ G+V+ A + +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC--R 424
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
+ L + + Y++L+ G +DEA +FEEM +KG ++ YN LI + +K+D
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
+ + + E G T L++G EALK+++ M++ + P +A + L
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
LC G RA K+ DEL G++L AA + M LCK G+ +A +
Sbjct: 545 STGLCLSGKVARACKILDELAPMGVILD--------AACEDMINTLCKAGRIKEACKLAD 596
Query: 476 QLMKRGTQDPTSYKILII 493
+ +RG + P + ++I
Sbjct: 597 GITERGREVPGRIRTVMI 614
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 219/522 (41%), Gaps = 46/522 (8%)
Query: 189 VGVSPSVVTFNSLLLILLK----RGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKN 244
+ +SP+ V+F +LK R + ++A S F + YT N+ C
Sbjct: 112 IKLSPNFVSF------VLKSDEIREKPDIAWSFF-----CWSRKQKKYTHNLE----CYV 156
Query: 245 SMVD--------DGFRFFQ-KMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
S+VD D RF ++ F + N L+ + G V+ V + M K
Sbjct: 157 SLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKM--K 214
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
+ P + +Y L+ G +D A VFE M +KP+ VTYNT+IKG C+ +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 356 KIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL 415
K E L +E G D T T++ + + ++++M E +Q +S++
Sbjct: 275 KAMEKLRD-METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 416 VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR 475
+ LC G +++ +++KG S P VA Y + K+G A R
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKG-------SKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 476 QLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
+++ G + D +Y +++ G CK G E + +S Y SLIDGL + G
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
A + ++M + + +++++ K E+ +L + E + + T+ T
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE-GCDQTVYT 505
Query: 595 HTVRL--LFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLLEANKLLLFCL 649
+T+ L +F ++ ++ ++ D G + L L S K+ A K+L
Sbjct: 506 YTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA 565
Query: 650 EKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQP 691
+D C +I LCK ++ EA L + E+G P
Sbjct: 566 PMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVP 606
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 189/461 (40%), Gaps = 36/461 (7%)
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSE-DLNPDVV------------------SYTTLLRGY 313
+DG CR +K + N V ++K E PD+ Y +L+
Sbjct: 103 LDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVL 162
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
+ +++D V E+ N LIK ++ ++++ V E G P
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKE-NGIEPT 221
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA-EKLY 432
T N LMNG +A ++ A +VFE M +++PD TY+ +++ C G ++A EKL
Sbjct: 222 LYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLR 281
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKIL 491
D + G Y +M Q + ++++ ++G Q P ++ ++
Sbjct: 282 D--------METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
I G CKEG GY + M+R+ P+ IY LIDG + G A + L +M+
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 552 VPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFR 611
P T+ ++ GL K G E+ + N + + L G D+ R
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 612 IVGLLYDNGYMVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNID--IDMCNTVIEG 666
+ + + G D LI ++ RK+ EA L +E+ D + ++ G
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR-MEEEEGCDQTVYTYTILLSG 512
Query: 667 LCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGR 707
+ K + EA L+ +++KG +C L L G+
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 111/263 (42%), Gaps = 6/263 (2%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A++ + + GF + +Y +++ L + + A ++ + + + + F++S
Sbjct: 381 AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG---LAINSMFYSS 437
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI G+AG E+ +LF M G + +N+L+ K + + A ++F M
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G YT+ IL+ G K ++ + + M P + L G+C +GKV A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ + L+ + ++ C I EA + + + ++G + +I
Sbjct: 558 CKILDELAPMGVILD---AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMI 614
Query: 346 KGLCEVQKIDKIKEVLEGALEVG 368
L +V K D +++ + +G
Sbjct: 615 NALRKVGKADLAMKLMHSKIGIG 637
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 140/595 (23%), Positives = 253/595 (42%), Gaps = 117/595 (19%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
P +A+K F + G + + L ++ + +L +A + L ++ K V
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLG--VPASQET 312
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ S+I ++ + G +E+V++ M G+ SV+ SL+ K A +F+ M
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM- 371
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV------ 276
G+APD F++++ FCKN ++ F+ +M S P V +T++ G
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431
Query: 277 ----------------------------CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTT 308
C+ GKV A + +K M +K + P+VV Y
Sbjct: 432 EAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG--IEPNVVFYNN 489
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPN------------------------------- 337
++ +C +N+D A +F EM++KGL+PN
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 338 ----AVTYNTLIKGLCEVQKIDKIKE--------------------VLEGALEVG----- 368
V YNT+I GLC+V + K KE +++G ++VG
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA 609
Query: 369 ----------GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
G SP+ T +L+NG C + ++ AL++ +M +++ D Y L+
Sbjct: 610 VETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDG 669
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
C D + A L+ EL + G++ P V+ Y S+ GK A +++++
Sbjct: 670 FCKKNDMKTAYTLFSELPELGLM-------PNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 479 KRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
G D +Y +I G K+G +L +L PD ++ L++GL +KG+ L
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 538 LAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTL 592
A + L++M K + P + +++AG ++G +E+ L +LE I + T+
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 222/497 (44%), Gaps = 79/497 (15%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS------------ 152
KAL FN + + G + + +M+E +N+ + + F ++ KS
Sbjct: 363 KALDLFNRMEEEGLAPDKVMFSVMVEWF--CKNMEMEKAIEFYMRMKSVRIAPSSVLVHT 420
Query: 153 --NGTVKLED-----RFFNSLIRSYGRAGLF----------QESVKLFTS----MKSVGV 191
G +K E FN S+ G Q V TS M+ G+
Sbjct: 421 MIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGI 480
Query: 192 SPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGF 251
P+VV +N+++L + ++A+S+F EML G+ P+ +T++ILI GF KN + +
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK-GLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 252 RFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR 311
+M++ N + + V YNT+++G+C+ G+ A +++ ++K+ + SY +++
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR-YSMSCTSYNSIID 598
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE--------- 362
G+ + D A+ + EM + G PN VT+ +LI G C+ ++D E+
Sbjct: 599 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 658
Query: 363 -----GALEVG--------------------GFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
GAL G G P+ N+L++G N G ++ A+ ++
Sbjct: 659 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 718
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
+KM+ + D TY+ ++ L G+ A LY ELL GI+ P + +
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV-------PDEILHMVL 771
Query: 458 FQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNF 516
L K G+ KA + ++ K+ T + Y +I GH +EG + L ML +
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Query: 517 DPDSEIYQSLIDGLLQK 533
D ++ L+ G ++K
Sbjct: 832 VHDDTVFNLLVSGRVEK 848
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 138/658 (20%), Positives = 280/658 (42%), Gaps = 65/658 (9%)
Query: 103 PSKALKFFNWL-PQMGFTHNDQSYFLMLEIL-------GRARNL-------------NVA 141
P AL++ NW+ P +++++ IL RA NL NV
Sbjct: 93 PVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVM 152
Query: 142 RNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSL 201
N L ++ +L R FN L+ +Y R +V F M V P V N++
Sbjct: 153 VNNLVDSSKRFG--FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNV 210
Query: 202 LLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFN 261
L L++ + AK ++++M+ GVA D T +L+R + ++ + F+++ S
Sbjct: 211 LSSLVRSNLIDEAKEIYNKMV-LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 262 CDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM-----VKKSEDLNPDVVSYTTLLRGYCMK 316
+PD + ++ V C+ + A ++++ M V S++ +YT+++ + +
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQE------TYTSVIVAFVKE 323
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCT 376
N++EA+ V +EMV G+ + + +L+ G C+ ++ K ++ +E G +PD
Sbjct: 324 GNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLF-NRMEEEGLAPDKVM 382
Query: 377 LNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELL 436
+ ++ C + +A++ + +M ++ P S +++ E A +++++
Sbjct: 383 FSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSF 442
Query: 437 KKGILLRDDGSTPLVAAYKSM----FQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKIL 491
+ I A+ M F CK GK A + + ++G + + Y +
Sbjct: 443 ESWI------------AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNM 490
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
++ HC+ + + ML + +P++ Y LIDG + + A+ + +M S+
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550
Query: 552 VPTTSTFHSILAGLLKKGYAHESASLVV-LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
+++I+ GL K G ++ ++ L+ E + + T + G D
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 611 RIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHN-------IDIDMCNTV 663
+ +NG ++ F S ++N++ L LE H +D+ +
Sbjct: 611 ETYREMSENG---KSPNVVTFTSLINGFCKSNRMDL-ALEMTHEMKSMELKLDLPAYGAL 666
Query: 664 IEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRMPNE 721
I+G CK + A+ L+ EL E G +S +L G+ L K+M N+
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 131/590 (22%), Positives = 252/590 (42%), Gaps = 72/590 (12%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
L+R+ R +E+VK+F + S G P + F+ + K MA + EM
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
GV T+ +I F K +++ R +M F ++ +LV+G C+ ++ A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ M + E L PD V ++ ++ +C +++A+ + M + P++V +T+I
Sbjct: 365 LDLFNRM--EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Query: 346 KG----------------------------------LCEVQKIDKIKEVLEGALEVGGFS 371
+G C+ K+D L+ +E G
Sbjct: 423 QGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLK-MMEQKGIE 481
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR-------------- 417
P+ N +M HC N++ A +F +M+E ++P++ TYS+L+
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 418 -NLCHIGDFERAEKLYDELLKKGI---------------LLRDDGSTPLVAAYKSMFQFL 461
N + +FE E +Y+ ++ G+ L+++ + +Y S+
Sbjct: 542 INQMNASNFEANEVIYNTII-NGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 462 CKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
K G T A +R++ + G + + ++ LI G CK + E+ M D
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
Y +LIDG +K + AY ++ + ++P S ++S+++G G + L
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 581 LLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD---MKELIIFLSQSRK 637
++ I ++ T + L +G + + L D G + D L+ LS+ +
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 638 LLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
L+A+K+L +K ++ + +TVI G + L+EAF L+ E++EKG
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 185/374 (49%), Gaps = 14/374 (3%)
Query: 97 LRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTV 156
L+ I+ P +AL F+ +MGF H+ SY ++ L ++RN + L ++ ++ V
Sbjct: 56 LKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN---V 112
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS 216
+ + F LI+ YG+AG +++ +F + S ++ + N+L+ +L+ G AKS
Sbjct: 113 RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKS 172
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV 276
FD + P++ +FNILI+GF + + F +M P +VTYN+L+ +
Sbjct: 173 FFDGA-KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
CR + A ++++ M+KK + P+ V++ L++G C K +EA + +M +G KP
Sbjct: 232 CRNDDMGKAKSLLEDMIKKR--IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKP 289
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
V Y L+ L + +ID+ K +L G ++ PD N L+N C + EA +V
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAK-LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRV 348
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
+M +P++ATY +++ C I DF+ + + +L P A +
Sbjct: 349 LTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLAS-------RHCPTPATFVC 401
Query: 457 MFQFLCKNGKTSKA 470
M L K G A
Sbjct: 402 MVAGLIKGGNLDHA 415
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 192/406 (47%), Gaps = 14/406 (3%)
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
+E++ LF + +G +++SL+ L K + + ++ V F
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL-RLVRYRNVRCRESLFMG 121
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
LI+ + K VD F K++SF+C I + NTL++ + G+++ A + G K
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG--AKD 179
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
L P+ VS+ L++G+ K + + A VF+EM++ ++P+ VTYN+LI LC + K
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
K +LE ++ P+ T LM G C G NEA K+ M +P Y +L+
Sbjct: 240 AKSLLEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 298
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
+L G + A+ L E+ K+ I P V Y + LC + +A R +
Sbjct: 299 SDLGKRGRIDEAKLLLGEMKKRRI-------KPDVVIYNILVNHLCTECRVPEAYRVLTE 351
Query: 477 LMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
+ +G + + +Y+++I G C+ F++G +L ML P + ++ GL++ G
Sbjct: 352 MQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGN 411
Query: 536 PLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK--GYAHESASLVV 579
A L+ M K ++ + + ++L+ L K G E+ S V+
Sbjct: 412 LDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEVI 457
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 145/316 (45%), Gaps = 7/316 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA+ F+ + QS ++ +L L A++F K + ++ FN
Sbjct: 134 KAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK---DMRLRPNSVSFN 190
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI+ + ++ + K+F M + V PSVVT+NSL+ L + AKS+ ++M+
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ P+ TF +L++G C ++ + M C P +V Y L+ + + G++
Sbjct: 251 R-IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A ++ M K+ + PDVV Y L+ C + + EA V EM KG KPNA TY +
Sbjct: 310 AKLLLGEMKKRR--IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I G C ++ D VL L P T ++ G GNL+ A V E M +
Sbjct: 368 IDGFCRIEDFDSGLNVLNAML-ASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Query: 405 VQPDSATYSVLVRNLC 420
+ S + L+ +LC
Sbjct: 427 LSFGSGAWQNLLSDLC 442
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 138/331 (41%), Gaps = 75/331 (22%)
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL--------------- 361
++ +EAL +F + + G + + +Y++LI L + + D + ++L
Sbjct: 60 EDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 119
Query: 362 -------------EGALEV-GGFSPDTC-----TLNTLMNGHCNAGNLNEALKVFEKMME 402
+ A++V + C +LNTL+N + G L +A F+ +
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+++P+S ++++L++ D+E A K++DE+L+ + P V Y S+ FLC
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEV-------QPSVVTYNSLIGFLC 232
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
+N KA+ LL M+++ P++
Sbjct: 233 RNDDMGKAK----------------------------------SLLEDMIKKRIRPNAVT 258
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL 582
+ L+ GL KGE A + + M P + +++ L K+G E+ L+ +
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMK 318
Query: 583 EGKIRQNVTLSTHTVRLLFSNGLRDKGFRIV 613
+ +I+ +V + V L + + +R++
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVL 349
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 197/402 (49%), Gaps = 18/402 (4%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFL--MLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
KA+ F+ + + N+Q M+ LGR + +A+ + G
Sbjct: 214 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYA--- 270
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG-RTNMAKSVFDEM 221
F++LI +YGR+GL +E++ +F SMK G+ P++VT+N+++ K G FDEM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
GV PD TFN L+ + + + F +M++ + D+ +YNTL+D +C+ G+
Sbjct: 331 QRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ A ++ M K + P+VVSY+T++ G+ DEAL +F EM G+ + V+Y
Sbjct: 390 MDLAFEILAQMPVKR--IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
NTL+ +V + ++ ++L V G D T N L+ G+ G +E KVF +M
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASV-GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
V P+ TYS L+ G ++ A +++ E G LR D V Y ++ L
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG--LRAD-----VVLYSALIDAL 559
Query: 462 CKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFE 502
CKNG A ++ K G + + +Y +I + T +
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 186/412 (45%), Gaps = 15/412 (3%)
Query: 121 NDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESV 180
+D +++ E+ R + F++KR+ + + +++I + GR G +
Sbjct: 196 SDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNE--QGKLASAMISTLGRYGKVTIAK 253
Query: 181 KLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRG 240
++F + + G +V F++L+ + G A SVF+ M YG+ P+ T+N +I
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM-KEYGLRPNLVTYNAVIDA 312
Query: 241 FCKNSM-VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDL 299
K M +FF +M PD +T+N+L+ R G + A N+ M + +
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR--I 370
Query: 300 NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKE 359
DV SY TLL C +D A + +M K + PN V+Y+T+I G + + D+
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 360 VLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
+ G + G + D + NTL++ + G EAL + +M ++ D TY+ L+
Sbjct: 431 LF-GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 420 CHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK 479
G ++ +K++ E+ ++ +L P + Y ++ K G +A FR+
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVL-------PNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 480 RGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
G + D Y LI CK G + L+ M + P+ Y S+ID
Sbjct: 543 AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)
Query: 124 SYFLMLEILGRARNLNVARNFL--FSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVK 181
SY +L+ + + +++A L +KR V ++++I + +AG F E++
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS-----YSTVIDGFAKAGRFDEALN 430
Query: 182 LFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGF 241
LF M+ +G++ V++N+LL I K GR+ A + EM S G+ D T+N L+ G+
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKKDVVTYNALLGGY 489
Query: 242 CKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNP 301
K D+ + F +M + P+++TY+TL+DG + G K A + + KS L
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF--KSAGLRA 547
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
DVV Y+ L+ C + A+ + +EM +G+ PN VTYN++I +D+ +
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 362 EGA------------LEVGG------FSPDTCTLNTLMNGHCNAG--NLNEALKVFEKMM 401
G E G F T N C G L+ L+VF KM
Sbjct: 608 NGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMH 667
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
+ +++P+ T+S ++ FE A L +EL
Sbjct: 668 QLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 154/342 (45%), Gaps = 14/342 (4%)
Query: 252 RFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR 311
R F+ + + ++ L+ R+G + A +V M K L P++V+Y ++
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM--KEYGLRPNLVTYNAVID 311
Query: 312 GYCMKQNIDEALVV--FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
C K ++ V F+EM G++P+ +T+N+L+ +C + + L +
Sbjct: 312 A-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRR 369
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
D + NTL++ C G ++ A ++ +M ++ P+ +YS ++ G F+ A
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSY 488
L+ E+ GI L +Y ++ K G++ +A R++ G + D +Y
Sbjct: 430 NLFGEMRYLGIALDR-------VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
L+ G+ K+G ++ ++ M R + P+ Y +LIDG + G A + ++
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
+ + + +++ L K G + SL+ + + I NV
Sbjct: 543 AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 114/275 (41%), Gaps = 47/275 (17%)
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPN--AVTYNTLIKGLCEVQKIDKIKEVLEGA 364
T ++R + D+A+ +E V + + N + +I L K+ K + E A
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG- 423
GG+ + L++ + +G EA+ VF M E+ ++P+ TY+ ++ + C G
Sbjct: 260 F-AGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI-DACGKGG 317
Query: 424 -DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT 482
+F++ K +DE+ + +G P + S+ +C G
Sbjct: 318 MEFKQVAKFFDEMQR-------NGVQPDRITFNSLLA-VCSRG----------------- 352
Query: 483 QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQT 542
G +EA L M R + D Y +L+D + + G+ LA++
Sbjct: 353 ----------------GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 543 LQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
L +M I+P ++ +++ G K G E+ +L
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 225/470 (47%), Gaps = 22/470 (4%)
Query: 113 LPQMGFTHNDQSYFLMLEILGRARNLNV-ARNFLFSIKRKSNGTVKLEDRF-FNSLIRSY 170
+P+ G + SY +++ G RN ++ + + + R S+G + D FNSL +
Sbjct: 82 MPRFGCEPDVISYNSLID--GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF 139
Query: 171 GRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPD 230
+ + E V ++ + SP+VVT+++ + K G +A F M ++P+
Sbjct: 140 SKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD-ALSPN 197
Query: 231 TYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVK 290
TF LI G+CK ++ +++M ++VTY L+DG C+ G+++ A +
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 291 GMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE 350
MV+ + + P+ + YTT++ G+ + + D A+ +M+++G++ + Y +I GLC
Sbjct: 258 RMVE--DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 351 VQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSA 410
K+ + E++E +E PD T+MN + +G + A+ ++ K++E +PD
Sbjct: 316 NGKLKEATEIVED-MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 411 TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA 470
S ++ + G +L++ ++ I +D Y + LCK G +
Sbjct: 375 ALSTMIDGIAKNG------QLHEAIVYFCIEKAND------VMYTVLIDALCKEGDFIEV 422
Query: 471 ERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
ER F ++ + G D Y I G CK+G ++L M++ D Y +LI G
Sbjct: 423 ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG 482
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
L KG + A Q +ML S I P ++ F ++ K+G ++ L++
Sbjct: 483 LASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 230/465 (49%), Gaps = 19/465 (4%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FNS++ + G + + + SM G P V+++NSL+ + G A V + +
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 223 STYG--VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
+++G PD +FN L GF K M+D+ F + M C P++VTY+T +D C++G
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSG 177
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+++ A M K + L+P+VV++T L+ GYC +++ A+ +++EM + N VT
Sbjct: 178 ELQLALKSFHSM--KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y LI G C+ ++ + +E+ +E P++ T+++G G+ + A+K KM
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVE-DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
+ ++ D Y V++ LC G + A ++ +++ K ++ P + + +M
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV-------PDMVIFTTMMNA 347
Query: 461 LCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
K+G+ A + +L++RG + D + +I G K G +E +V +
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL---HEAIVYFCIEK--AN 402
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
+Y LID L ++G+ + + K+ ++ +VP + S +AGL K+G ++ L
Sbjct: 403 DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD 624
+++ + ++ T + L S GL + ++ + ++G D
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 225/476 (47%), Gaps = 21/476 (4%)
Query: 218 FDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVC 277
F L + G P +FN ++ CK V M F C+PD+++YN+L+DG C
Sbjct: 43 FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 278 RAGKVKTAHNVVKGMVKKSEDL--NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
R G +++A V++ + + S PD+VS+ +L G+ + +DE V M+ K
Sbjct: 103 RNGDIRSASLVLESL-RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCS 160
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
PN VTY+T I C+ ++ + +++ SP+ T L++G+C AG+L A+
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFH-SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
++++M ++ + TY+ L+ C G+ +RAE++Y ++ +D P Y
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV-------EDRVEPNSLVYT 272
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
++ + G + A + +++ +G + D T+Y ++I G C G + E++ M +
Sbjct: 273 TIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
+ PD I+ ++++ + G A K+++ P +++ G+ K G HE
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE- 391
Query: 575 ASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD---MKELIIF 631
++V +E + N + T + L G + R+ + + G + D I
Sbjct: 392 -AIVYFCIE---KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAG 447
Query: 632 LSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
L + L++A KL +++ +D+ T+I GL + EA ++ E++ G
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 200/465 (43%), Gaps = 56/465 (12%)
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
PD +T N I ++ +F + S P ++N++V VC+ G+VK A ++
Sbjct: 19 PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
V M + G +P+ ++YN+LI G
Sbjct: 79 VHSMPRF-------------------------------------GCEPDVISYNSLIDGH 101
Query: 349 CEVQKIDKIKEVLEGALEVGGF--SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
C I VLE GF PD + N+L NG L+E V+ +M
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCS 160
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
P+ TYS + C G+ + A K + + + D +P V + + CK G
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSM-------KRDALSPNVVTFTCLIDGYCKAGD 213
Query: 467 TSKAERGFRQLMK-RGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQS 525
A ++++ + R + + +Y LI G CK+G + E+ M+ +P+S +Y +
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 526 LIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGK 585
+IDG Q+G+ A + L KML + + + I++GL G E+ +V + +
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 586 IRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLLEAN 642
+ ++ + T + F +G + L + G+ +V + +I ++++ +L EA
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA- 392
Query: 643 KLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
++ FC+EK +++ M +I+ LCK E L+ ++ E G
Sbjct: 393 -IVYFCIEKANDV---MYTVLIDALCKEGDFIEVERLFSKISEAG 433
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 152/343 (44%), Gaps = 67/343 (19%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F LI Y +AG + +V L+ M+ V +S +VVT+ +L+ K+G A+ ++ M+
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
V P++ + +I GF + D+ +F KM + DI Y ++ G+C GK+
Sbjct: 261 EDR-VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K A +V+ M K DL PD+V +TT++ Y + A+ ++ +++++G +P+ V +
Sbjct: 320 KEATEIVEDMEKS--DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 343 TLIKGL-------------CEVQKIDKIKEVLEGAL-------EV---------GGFSPD 373
T+I G+ C + D + VL AL EV G PD
Sbjct: 378 TMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Query: 374 TCTLNTLMNGHCNAGNLNEALK-----------------------------------VFE 398
+ + G C GNL +A K VF+
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFD 497
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
+M+ + PDSA + +L+R G+ A L ++ ++G++
Sbjct: 498 EMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 211/432 (48%), Gaps = 34/432 (7%)
Query: 105 KALKFFNWLPQMG-FTH-NDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
++L FFNW + H + Y M+++ G+ R ++A + L + + N + +E
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWH-LIDLMKSRNVEISIET-- 188
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F LIR Y RAGL E+V F M+ G P + F+ ++ L ++ R + A+S FD +
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK 248
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ PD + L+RG+C+ + + + F++M +P++ TY+ ++D +CR G++
Sbjct: 249 DRF--EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
AH+V M+ P+ +++ L+R + ++ L V+ +M G +P+ +TYN
Sbjct: 307 SRAHDVFADMLDSG--CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI+ C + ++ +VL ++ + T NT+ ++N A +++ KMME
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIK-KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME 423
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
K +P++ TY++L+R K D +LK + D P V Y+ + C
Sbjct: 424 AKCEPNTVTYNILMRMFV-------GSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
G + A + F+++++ P+ + YE+++ LRR +
Sbjct: 477 GMGHWNNAYKLFKEMVEEKCLTPSL---------------SLYEMVLAQLRRA--GQLKK 519
Query: 523 YQSLIDGLLQKG 534
++ L++ ++QKG
Sbjct: 520 HEELVEKMIQKG 531
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 185/341 (54%), Gaps = 9/341 (2%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S+A+ FN + G + ++ +++ L R R + A++F S+K + V + +
Sbjct: 203 SEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIV----Y 258
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+L+R + RAG E+ K+F MK G+ P+V T++ ++ L + G+ + A VF +ML
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD 318
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ G AP+ TFN L+R K + + + +M C+PD +TYN L++ CR ++
Sbjct: 319 S-GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A V+ M+KK ++N ++ T+ R K++++ A ++ +M++ +PN VTYN
Sbjct: 378 NAVKVLNTMIKKKCEVNAS--TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L++ + D + + ++ ++ P+ T L+ C G+ N A K+F++M+E
Sbjct: 436 LMRMFVGSKSTDMVLK-MKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEE 494
Query: 404 K-VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR 443
K + P + Y +++ L G ++ E+L +++++KG++ R
Sbjct: 495 KCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVAR 535
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 188/388 (48%), Gaps = 14/388 (3%)
Query: 198 FNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM 257
+N ++ + K + ++A + D ++ + V TF ILIR + + + + F +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLID-LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 258 SSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQ 317
+ C PD + ++ ++ + R + A + + + E PDV+ YT L+RG+C
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFE---PDVIVYTNLVRGWCRAG 269
Query: 318 NIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTL 377
I EA VF+EM G++PN TY+ +I LC +I + +V L+ G +P+ T
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD-SGCAPNAITF 328
Query: 378 NTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLK 437
N LM H AG + L+V+ +M + +PD+ TY+ L+ C + E A K+ + ++K
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 438 KGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILIIGHC 496
K + + + ++F+++ K + A R + ++M+ + T +Y IL+
Sbjct: 389 KKCEVN-------ASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFV 441
Query: 497 KEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS-SIVPTT 555
+ + ++ M + +P+ Y+ L+ G AY+ ++M++ + P+
Sbjct: 442 GSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSL 501
Query: 556 STFHSILAGLLKKGYAHESASLVVLLLE 583
S + +LA L + G + LV +++
Sbjct: 502 SLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/565 (20%), Positives = 221/565 (39%), Gaps = 101/565 (17%)
Query: 178 ESVKLFTSMKSVGVSP--------SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP 229
ES T+ SV +SP +V F+S++ ++ T+ ++ + L+ + ++
Sbjct: 40 ESAATITAAVSVPISPLLTPEDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSL 99
Query: 230 DTYTFNI------LIRGFC-KNSMVDDGFRFFQKMSSFNC-----DPDIVT---YNTLVD 274
D ++R K V G Q ++ FN D D + YN ++D
Sbjct: 100 DFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMID 159
Query: 275 GVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL 334
+ + A +++ M KS ++ + ++T L+R Y EA+ F M D G
Sbjct: 160 LSGKVRQFDLAWHLIDLM--KSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGC 217
Query: 335 KPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEAL 394
P+ + ++ +I L ++ + + + + F PD L+ G C AG ++EA
Sbjct: 218 VPDKIAFSIVISNLSRKRRASEAQSFFDSLKD--RFEPDVIVYTNLVRGWCRAGEISEAE 275
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAY 454
KVF++M ++P+ TYS+++ LC G RA ++ ++L D G P +
Sbjct: 276 KVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML-------DSGCAPNAITF 328
Query: 455 KSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
++ + K G+T K + + Q+ K G +
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCE------------------------------- 357
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
PD+ Y LI+ + A + L M+K STF++I + KK + +
Sbjct: 358 ---PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGA 414
Query: 575 ASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQ 634
+ ++E K N +R+ + D ++ + D
Sbjct: 415 HRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDD---------------- 458
Query: 635 SRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQP-LS 693
K +E N ++ ++ C M + A+ L+ E+VE+ P LS
Sbjct: 459 --KEVEPN--------------VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLS 502
Query: 694 CLENLRVALEAGGRSKEVEFLSKRM 718
E + L G+ K+ E L ++M
Sbjct: 503 LYEMVLAQLRRAGQLKKHEELVEKM 527
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 230/505 (45%), Gaps = 24/505 (4%)
Query: 108 KFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
+FF W Q + H+ + Y M++IL + R + + RK N + +E F L
Sbjct: 132 RFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEM-RKENPQL-IEPELFVVL 189
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
++ + A + ++++++ M G P F LL L K G A +F++M +
Sbjct: 190 VQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFP 249
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
V + F L+ G+C+ + + +M+ +PDIV Y L+ G AGK+ A+
Sbjct: 250 V--NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAY 307
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
++++ M ++ P+ YT L++ C ++EA+ VF EM + + VTY L+
Sbjct: 308 DLLRDMRRRG--FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 347 GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
G C+ KIDK VL+ ++ G P T +M H + E L++ EKM + +
Sbjct: 366 GFCKWGKIDKCYIVLDDMIK-KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
PD Y+V++R C +G+ + A +L++E+ ++G +P V + M L G
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEM-------EENGLSPGVDTFVIMINGLASQGC 477
Query: 467 TSKAERGFRQLMKRGTQDPTSY---KILIIGHCKEGTFEAGYELLVLMLRRN-FDPDSEI 522
+A F++++ RG + Y K+L+ K+ E ++ + + + +
Sbjct: 478 LLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLS 537
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL 582
+ I L KG A +M++ +P TF ++ G LKK Y E A +
Sbjct: 538 WTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKG-LKKLYNREFAGEIT--- 593
Query: 583 EGKIRQNVTLSTHTVRLLFSNGLRD 607
K+R + ++ G++D
Sbjct: 594 -EKVRNMAAEREMSFKMYKRRGVQD 617
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 145/299 (48%), Gaps = 12/299 (4%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA++ + +P+ GF ++ + +L+ L + ++ A ++ + + R+F
Sbjct: 201 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNL----RYFT 256
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
SL+ + R G E+ + M G P +V + +LL G+ A + +M
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDM-RR 315
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P+ + +LI+ CK +++ + F +M + C+ D+VTY LV G C+ GK+
Sbjct: 316 RGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDK 375
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ V+ M+KK L P ++Y ++ + K++ +E L + E+M P+ YN +
Sbjct: 376 CYIVLDDMIKKG--LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 433
Query: 345 IKGLCEVQKIDKIKEV--LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
I+ C K+ ++KE L +E G SP T ++NG + G L EA F++M+
Sbjct: 434 IRLAC---KLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 152/359 (42%), Gaps = 27/359 (7%)
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+ L++ + K EVL+ + GF PD L++ C G++ +A K+FE M
Sbjct: 186 FVVLVQRFASADMVKKAIEVLD-EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM 244
Query: 401 -MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M + V + ++ L+ C +G A+ + + + + G P + Y ++
Sbjct: 245 RMRFPV--NLRYFTSLLYGWCRVGKMMEAKYVL-------VQMNEAGFEPDIVDYTNLLS 295
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
GK + A R + +RG + + Y +LI CK E ++ V M R +
Sbjct: 296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
D Y +L+ G + G+ Y L M+K ++P+ T+ I+ KK E L+
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 579 VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIF---LSQS 635
+ + + ++ + +RL G + R+ + +NG + +I L+
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Query: 636 RKLLEANKLL-------LFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
LLEA+ LF + ++ + + + NTV+ K KKL A ++ + KG
Sbjct: 476 GCLLEASDHFKEMVTRGLFSVSQYGTLKL-LLNTVL----KDKKLEMAKDVWSCITSKG 529
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 211/434 (48%), Gaps = 22/434 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F + + + G +Q S++LF M + + P+ + ++ +L + G + VFDEM
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
S GV+ +++ LI + +N + +M + P I+TYNT+++ R G
Sbjct: 168 PSQ-GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG- 225
Query: 282 VKTAHNVVKGMVK--KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
+ G+ + E + PD+V+Y TLL ++ DEA +VF M D G+ P+
Sbjct: 226 --LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLT 283
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
TY+ L++ ++++++K+ ++L G + GG PD + N L+ + +G++ EA+ VF +
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLL-GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M P++ TYSVL+ G ++ +L+ E ++ + P A Y + +
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE-------MKSSNTDPDAATYNILIE 395
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
+ G + F +++ + D +Y+ +I K G E ++L M + P
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 519 DSEIYQSLIDGLLQKG---EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESA 575
S+ Y +I+ Q E L+A+ T+ ++ + P+ TFHS+L + G ES
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN---PSIETFHSLLYSFARGGLVKESE 512
Query: 576 SLVVLLLEGKIRQN 589
+++ L++ I +N
Sbjct: 513 AILSRLVDSGIPRN 526
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 145/370 (39%), Gaps = 37/370 (10%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A+ F+ + G T N +Y ++L + G++ + R +K + + +N
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK---SSNTDPDAATYN 391
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI +G G F+E V LF M + P + T+ ++ K G A+ + M +
Sbjct: 392 ILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ P + + +I F + ++ ++ F M +P I T+++L+ R G VK
Sbjct: 452 -DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 285 AHNVV-----KGMVKKSEDLN----------------------------PDVVSYTTLLR 311
+ ++ G+ + + N PD + +L
Sbjct: 511 SEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS 570
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFS 371
Y + +DE FEEM + P+ + Y ++ + ++ D + E+LE L +
Sbjct: 571 VYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSN 630
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKL 431
+ + + N V +K+ Y+ L+ L +G ERA ++
Sbjct: 631 IHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARV 690
Query: 432 YDELLKKGIL 441
+E K+G+
Sbjct: 691 LNEATKRGLF 700
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 187/493 (37%), Gaps = 90/493 (18%)
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMS-SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
F ++ + F R F+ M C P+ Y ++ + R G + V M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
S+ ++ V SYT L+ Y + +L + + M ++ + P+ +TYNT+I C
Sbjct: 168 --PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARG 224
Query: 353 KIDKIKEVLEGALEV------GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
+D EG L + G PD T NTL++ G +EA VF M + +
Sbjct: 225 GLD-----WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIV 279
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
PD TYS LV G R EK+ D L + + GS P
Sbjct: 280 PDLTTYSHLVETF---GKLRRLEKVCDLLGE----MASGGSLP----------------- 315
Query: 467 TSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSL 526
D TSY +L+ + K G+ + + M P++ Y L
Sbjct: 316 -----------------DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 527 IDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKI 586
++ Q G Q +M S+ P +T++ ++ + GY E VV L +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE----VVTLFHDMV 414
Query: 587 RQNVTLSTHTVR-LLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLL 645
+N+ T ++F+ G KG G D ++++ +++ + ++ ++K
Sbjct: 415 EENIEPDMETYEGIIFACG---KG----------GLHEDARKILQYMT-ANDIVPSSKAY 460
Query: 646 LFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAG 705
VIE + EA + + E G++ + +L + G
Sbjct: 461 ---------------TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARG 505
Query: 706 GRSKEVEFLSKRM 718
G KE E + R+
Sbjct: 506 GLVKESEAILSRL 518
>AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1672161-1673675 FORWARD
Length = 504
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 223/475 (46%), Gaps = 18/475 (3%)
Query: 95 QVLRLIKVPSKALKFFNWLPQM--GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS 152
Q+L+ K P ALK F + + HN Y M++ILG++ N + I+R
Sbjct: 17 QILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKS---NRVLEMKYVIERMK 73
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
+ + +D F S+IR++ RAG ++++ LF S+ ++F++LL ++K
Sbjct: 74 EDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELE 133
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
A +F + + V N+L++ C+ + D + FQ+M+ C PD +Y L
Sbjct: 134 AACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRIL 193
Query: 273 VDGVCRAGKVKTAHNVVKGMVKK--SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
+ G C GK++ A +++ M + + D+V Y LL C +D+A+ + +++
Sbjct: 194 MKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKIL 253
Query: 331 DKGLKPNAVTYNTLIKGLCE--VQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
KGLK Y+ + G E + I+++K +L L + G P + + + G
Sbjct: 254 RKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL-IRGAIPCLDSYSAMATDLFEEG 312
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
L E +V M +P Y V+ LC G + A + ++ + +G L
Sbjct: 313 KLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL------ 366
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT--QDPTSYKILIIGHCKEGTFEAGYE 506
P V Y + + LC +GK+ +A +++ K+ + + +Y+ L+ G C++G F +
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQ 426
Query: 507 LLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSI 561
++ ML ++ P E Y +I GL A L++M+ +VP +S + ++
Sbjct: 427 VMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 117/528 (22%), Positives = 212/528 (40%), Gaps = 105/528 (19%)
Query: 175 LFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTF 234
LF+E+ + F S G + SV + +++ IL K R K V + M D+ F
Sbjct: 31 LFEEAKERFPSY---GHNGSV--YATMIDILGKSNRVLEMKYVIERMKEDSCECKDS-VF 84
Query: 235 NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVK 294
+IR F + ++D F+ + FNC ++++TL+ + MVK
Sbjct: 85 ASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL----------------QEMVK 128
Query: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
+SE + + + R YC ++ + N L+K LC+V +
Sbjct: 129 ESE-----LEAACHIFRKYCYGWEVNSRITAL---------------NLLMKVLCQVNRS 168
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ-----PDS 409
D +V + + G PD + LM G C G L EA + M W++ D
Sbjct: 169 DLASQVFQ-EMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMF-WRISQKGSGEDI 226
Query: 410 ATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSK 469
Y +L+ LC G+ + A ++ ++L+KG+ A K + + + G
Sbjct: 227 VVYRILLDALCDAGEVDDAIEILGKILRKGL-----------KAPKRCYHHI-EAGHWES 274
Query: 470 AERGFRQLMKRGTQD------PT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ G ++ + T+ P SY + +EG G E+L+ M + F+P
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQK-MLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
IY + + L + G+ A + K M++ +PT ++ ++ GL G + E+ +
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYL-- 392
Query: 581 LLEGKIRQNVTL--STHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKL 638
K+ + V+ + T + L RD F
Sbjct: 393 ---KKMSKQVSCVANEETYQTLVDGLCRDGQF---------------------------- 421
Query: 639 LEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEK 686
LEA++++ L K H ++ + +I+GLC M + EA E+V +
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 174 GLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYT 233
G E ++ +M+S G P+ + + + L + G+ A SV ++ + P
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMS-SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
+N+LI+G C + + + +KMS +C + TY TLVDG+CR G+ A V++ M
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLC 349
+ KS P V +Y +++G C EA++ EEMV + + P + + L + +C
Sbjct: 432 LIKSH--FPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G P +++ + + + +G M S +P Y V +CRAGK+K A
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK-GLKPNAVTYNTL 344
+V+ + + L P V Y L++G C EA+ ++M + N TY TL
Sbjct: 353 VSVINKEMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTL 411
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ GLC + + +V+E L F P T + ++ G C+ EA+ E+M+
Sbjct: 412 VDGLCRDGQFLEASQVMEEMLIKSHF-PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQD 470
Query: 405 VQPDSATYSVLVRNLC 420
+ P+S+ + L ++C
Sbjct: 471 MVPESSVWKALAESVC 486
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 230/514 (44%), Gaps = 62/514 (12%)
Query: 106 ALKFFNWLPQMG---FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
+K F+WL F N + L++L R R N + L +++ N VKL
Sbjct: 80 GVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLR---NENVKLTHEA 136
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVS-PSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+ ++ +Y +G ++V+++ + + S P V+ NSLL +L+K R A+ V+DEM
Sbjct: 137 LSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEM 196
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
G + D Y+ IL++G +C GK
Sbjct: 197 CDR-GDSVDNYSTCILVKG-----------------------------------MCNEGK 220
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
V+ +++G K P++V Y T++ GYC +I+ A +VF+E+ KG P T+
Sbjct: 221 VEVGRKLIEGRWGKG--CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 342 NTLIKGLCE----VQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
T+I G C+ V + EV E L V + LN +++ G + +
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVW-----FLNNIIDAKYRHGYKVDPAESI 333
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
++ +PD ATY++L+ LC G E A DE KKG++ + PL+ AY
Sbjct: 334 GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY--- 390
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNF 516
CK+ + A + Q+ +RG + D +Y ILI G G + + V ++ R
Sbjct: 391 ----CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 517 DPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESAS 576
PD+ IY L+ GL + G L A +ML +I+P + +++ G ++ G E+
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 577 LVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
+ L +E ++ +V ++ +G+ D+
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 213/485 (43%), Gaps = 52/485 (10%)
Query: 128 MLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS-LIRSYGRAGLFQESVKLFTSM 186
+L +L ++R L AR + + + D + L++ G + KL
Sbjct: 176 LLSLLVKSRRLGDARKVYDEMCDRGDSV----DNYSTCILVKGMCNEGKVEVGRKLIEGR 231
Query: 187 KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK--- 243
G P++V +N+++ K G A VF E L G P TF +I GFCK
Sbjct: 232 WGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE-LKLKGFMPTLETFGTMINGFCKEGD 290
Query: 244 -----------------------NSMVDDGFRFFQKMS---------SFNCDPDIVTYNT 271
N+++D +R K+ + +C PD+ TYN
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI 350
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
L++ +C+ GK + A + KK L P+ +SY L++ YC + D A + +M +
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKG--LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
+G KP+ VTY LI GL +D ++ L G SPD N LM+G C G
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVN-MKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
A +F +M++ + PD+ Y+ L+ GDF+ A K++ ++KG+ + V
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD-------V 520
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVL 510
+ +M + C++G +A ++ + D +Y +I G+ K+ ++
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRY 580
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGY 570
M + P+ Y SLI+G +G+ +A +T ++M +VP T+ +++ L K+
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640
Query: 571 AHESA 575
E A
Sbjct: 641 TLEKA 645
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 201/460 (43%), Gaps = 49/460 (10%)
Query: 110 FNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRS 169
F L GF +++ M+ + + + L +K + +++ F N++I +
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG---LRVSVWFLNNIIDA 319
Query: 170 YGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP 229
R G + + + + P V T+N L+ L K G+ +A DE S G+ P
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEA-SKKGLIP 378
Query: 230 DTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVV 289
+ ++ LI+ +CK+ D + +M+ C PDIVTY L+ G+ +G + A N+
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 290 KGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLC 349
++ + ++PD Y L+ G C A ++F EM+D+ + P+A Y TLI G
Sbjct: 439 VKLIDRG--VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 350 EVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDS 409
D+ ++V ++E G D N ++ G C +G L+EAL +M E + PD
Sbjct: 497 RSGDFDEARKVFSLSVE-KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 410 ATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSK 469
TYS ++ G + + D +T + +F+++ KN
Sbjct: 556 FTYSTII---------------------DGYVKQQDMATAI-----KIFRYMEKN----- 584
Query: 470 AERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
+ + +Y LI G C +G F+ E M R+ P+ Y +LI
Sbjct: 585 ----------KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 530 LLQKGEPL-LAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
L ++ L A + M+ + VP TF+ +L G +KK
Sbjct: 635 LAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 182/406 (44%), Gaps = 22/406 (5%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A+ F + + G N+ SY +++ +++ ++A L + + K + +
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG---CKPDIVTYGI 420
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI +G ++V + + GVSP +N L+ L K GR AK +F EML
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR- 479
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
+ PD Y + LI GF ++ D+ + F D+V +N ++ G CR+G + A
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
+ M E L PD +Y+T++ GY +Q++ A+ +F M KPN VTY +LI
Sbjct: 540 LACMNRM--NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC-NAGNLNEALKVFEKMMEWK 404
G C Q K+ E +++ P+ T TL+ + L +A+ +E MM K
Sbjct: 598 NGFC-CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNK 656
Query: 405 VQPDSATYSVLVRNLCH----------IGDFERAEKLYDELLKKGILLRDDGSTPLVAAY 454
P+ T++ L++ G L+ E + ++ DG + AAY
Sbjct: 657 CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHR---MKSDGWSDHAAAY 713
Query: 455 KSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEG 499
S LC +G A +++K+G + DP S+ ++ G C G
Sbjct: 714 NSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 187/427 (43%), Gaps = 36/427 (8%)
Query: 298 DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI 357
D PDV++ +LL + + +A V++EM D+G + + L+KG+C K++
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224
Query: 358 KEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
++++EG G P+ NT++ G+C G++ A VF+++ P T+ ++
Sbjct: 225 RKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMIN 283
Query: 418 NLCHIGDFERAEKLYDELLKKGI-----------------------------LLRDDGST 448
C GDF +++L E+ ++G+ ++ +D
Sbjct: 284 GFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND-CK 342
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYEL 507
P VA Y + LCK GK A + K+G + SY LI +CK ++ +L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
L+ M R PD Y LI GL+ G A K++ + P + ++ +++GL K
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM-- 625
G + L +L+ I + + + +G D+ ++ L + G VD+
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 626 -KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELV 684
+I +S L EA + E+H D +T+I+G K + ++ A + + +
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI-FRYM 581
Query: 685 EKGNHQP 691
EK +P
Sbjct: 582 EKNKCKP 588
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 21/278 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ +LI + R+G F E+ K+F+ GV VV N+++ + G + A + + M
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ + PD +T++ +I G+ K + + F+ M C P++VTY +L++G C G
Sbjct: 548 EEH-LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN-IDEALVVFEEMVDKGLKPNAVTY 341
K A K M + DL P+VV+YTTL+R + + +++A+ +E M+ PN VT+
Sbjct: 607 KMAEETFKEM--QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTF 664
Query: 342 NTLIKGLCEVQKID-KIKEVLEGA--------------LEVGGFSPDTCTLNTLMNGHCN 386
N L++G V+K K+ +G+ ++ G+S N+ + C
Sbjct: 665 NCLLQGF--VKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCV 722
Query: 387 AGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
G + A +KM++ PD +++ ++ C +G+
Sbjct: 723 HGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ SLI + G F+ + + F M+ + P+VVT+ +L+ L K T + E++
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM 652
Query: 223 STYGVAPDTYTFNILIRGFCKNS-----MVDDG---------FRFFQKMSSFNCDPDIVT 268
T P+ TFN L++GF K + DG FF +M S
Sbjct: 653 MTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAA 712
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEAL-VVFE 327
YN+ + +C G VKTA MVKK +PD VS+ +L G+C+ N + + F
Sbjct: 713 YNSALVCLCVHGMVKTACMFQDKMVKKG--FSPDPVSFAAILHGFCVVGNSKQWRNMDFC 770
Query: 328 EMVDKGLKPNAVTYNTLIKG------LCEVQKI 354
+ +KGL+ AV Y+ +++ +CE I
Sbjct: 771 NLGEKGLEV-AVRYSQVLEQHLPQPVICEASTI 802
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 195/381 (51%), Gaps = 17/381 (4%)
Query: 106 ALKFFNWLPQ-MGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
A +FF W + GF H+ ++Y M+ IL + R + L + K G + +E F
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK--GLLTMET--FT 232
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++++ A +++V +F MK V T N LL L + A+ +FD++
Sbjct: 233 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 292
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ P+ T+ +L+ G+C+ + + R + M PDIV +N +++G+ R+ K
Sbjct: 293 F--TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 350
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + V KS+ P+V SYT ++R +C + +++ A+ F++MVD GL+P+A Y L
Sbjct: 351 AIKLFH--VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I G +K+D + E+L+ ++ G PD T N L+ N +++ KM++ +
Sbjct: 409 ITGFGTQKKLDTVYELLK-EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE 467
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
++P T+++++++ ++E ++DE++KKGI D+ T L+ L
Sbjct: 468 IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG-------LISE 520
Query: 465 GKTSKAERGFRQLMKRGTQDP 485
GK+ +A R +++ +G + P
Sbjct: 521 GKSREACRYLEEMLDKGMKTP 541
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 184/383 (48%), Gaps = 18/383 (4%)
Query: 190 GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
G + T+NS++ IL K + SV +EM T G+ TF I ++ F
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLT-METFTIAMKAFAAAKERKK 246
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
F+ M + + T N L+D + RA K A + K E P++++YT L
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD---KLKERFTPNMMTYTVL 303
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE-VQKIDKIKEVLEGALEVG 368
L G+C +N+ EA ++ +M+D GLKP+ V +N +++GL ++K D IK L ++
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK--LFHVMKSK 361
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G P+ + ++ C ++ A++ F+ M++ +QPD+A Y+ L+ G ++
Sbjct: 362 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKL 418
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-- 486
+ +Y ELLK+ +++ G P Y ++ + + R + ++++ + P+
Sbjct: 419 DTVY-ELLKE---MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE-PSIH 473
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
++ +++ + +E G + M+++ PD Y LI GL+ +G+ A + L++M
Sbjct: 474 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
Query: 547 LKSSIVPTTSTFHSILAGLLKKG 569
L + ++ A + G
Sbjct: 534 LDKGMKTPLIDYNKFAADFHRGG 556
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 157/363 (43%), Gaps = 38/363 (10%)
Query: 250 GFRFF---QKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
FRFF + F D TYN+++ + + + +T +V++ M K + ++
Sbjct: 177 AFRFFCWAAERQGFAHDSR--TYNSMMSILAKTRQFETMVSVLEEMGTKG---LLTMETF 231
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
T ++ + + +A+ +FE M K T N L+ L K+ K +VL L+
Sbjct: 232 TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLK 290
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
F+P+ T L+NG C NL EA +++ M++ ++PD ++V++ L
Sbjct: 291 -ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 349
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DP 485
A KL+ +++ G P V +Y M + CK A F ++ G Q D
Sbjct: 350 DAIKLFH-------VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 486 TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
Y LI G + + YELL M + PD + Y +LI + + P + K
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
Query: 546 MLKSSIVPTTSTFHSILAG----------------LLKKGYAHESASLVVLLL----EGK 585
M+++ I P+ TF+ I+ ++KKG + S VL+ EGK
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Query: 586 IRQ 588
R+
Sbjct: 523 SRE 525
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 106/260 (40%), Gaps = 41/260 (15%)
Query: 118 FTHNDQSYFLMLEILGRARNL-NVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
FT N +Y ++L R RNL AR + I + + L+RS ++
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS--- 349
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST------------ 224
+++KLF MKS G P+V ++ ++ K+ A FD+M+ +
Sbjct: 350 -DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 225 ----------------------YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNC 262
G PD T+N LI+ M + G R + KM
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 263 DPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEA 322
+P I T+N ++ A + V M+KK + PD SYT L+RG + EA
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG--ICPDDNSYTVLIRGLISEGKSREA 526
Query: 323 LVVFEEMVDKGLKPNAVTYN 342
EEM+DKG+K + YN
Sbjct: 527 CRYLEEMLDKGMKTPLIDYN 546
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 172/417 (41%), Gaps = 43/417 (10%)
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
D +Y +++ + + + V EEM KGL T+ +K ++ K +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIF 251
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
E ++ F T+N L++ A EA +F+K+ E + P+ TY+VL+ C
Sbjct: 252 E-LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCR 309
Query: 422 IGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG 481
+ + A +++++++ D G P + A+ M + L ++ K S A + F + +G
Sbjct: 310 VRNLIEAARIWNDMI-------DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 482 -TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAY 540
+ SY I+I CK+ + E E M+ PD+ +Y LI G + + Y
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 541 QTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLL 600
+ L++M + P T+++++ + + + +++ +I ++ HT ++
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI----HTFNMI 478
Query: 601 FSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMC 660
+ + + + ++D E+I +K D +
Sbjct: 479 MKSYFVARNYEMGRAVWD--------EMI--------------------KKGICPDDNSY 510
Query: 661 NTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKR 717
+I GL K EA E+++KG PL GG+ + E L++R
Sbjct: 511 TVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 567
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A+++F+ + G + Y ++ G + L+ L ++ K + + + +N+
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP---DGKTYNA 442
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI+ + + +++ M + PS+ TFN ++ M ++V+DEM+
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK- 501
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
G+ PD ++ +LIRG + R+ ++M ++ YN R G+
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 169/345 (48%), Gaps = 9/345 (2%)
Query: 103 PSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
P A + F++ Q F H+ S+ +++ LGR R N+ + L K +S+G L
Sbjct: 64 PLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVL--AKHRSSG-YPLTGE 120
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK-RGRTNMAKSVFDE 220
F LI+ Y A L ++ + F M +P N +L +L+ RG A +F
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
+GV P+T ++N+L++ FC N + ++ F KM + PD+ +Y L+ G CR G
Sbjct: 181 S-RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+V A ++ M+ K PD +SYTTLL C K + EA + M KG P+ V
Sbjct: 240 QVNGAMELLDDMLNKG--FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVH 297
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
YNT+I G C + ++VL+ L G SP++ + TL+ G C+ G +E K E+M
Sbjct: 298 YNTMILGFCREDRAMDARKVLDDMLS-NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
+ P + + LV+ C G E A + + ++K G L D
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSD 401
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 5/268 (1%)
Query: 101 KVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLED 160
K+P K L F + + FT + +L++L R LF R V
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHG--VMPNT 190
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
R +N L++++ + +LF M V P V ++ L+ ++G+ N A + D+
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
ML+ G PD ++ L+ C+ + + + ++ +M C+PD+V YNT++ G CR
Sbjct: 251 MLNK-GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED 309
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ A V+ M+ S +P+ VSY TL+ G C + DE EEM+ KG P+
Sbjct: 310 RAMDARKVLDDML--SNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 367
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVG 368
N L+KG C K+++ +V+E ++ G
Sbjct: 368 SNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 131/280 (46%), Gaps = 10/280 (3%)
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK-IDKIKEVLEGA 364
+T L++ Y + ++ L F +M++ P N ++ L + + K E+ + +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
+ G P+T + N LM C +L+ A ++F KM+E V PD +Y +L++ C G
Sbjct: 182 -RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF-RQLMKRGTQ 483
A +L D++L KG + P +Y ++ LC+ + +A + R +K
Sbjct: 241 VNGAMELLDDMLNKGFV-------PDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
D Y +I+G C+E ++L ML P+S Y++LI GL +G + L
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
++M+ P S + ++ G G E+ +V ++++
Sbjct: 354 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 143/310 (46%), Gaps = 12/310 (3%)
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC-NAGNLNEALKVFEK 399
+ LIK E + +K+ LE F+P LN +++ + G L +A ++F+
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFN-FTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
V P++ +Y++L++ C D A +L+ ++L++ ++ P V +YK + Q
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV-------PDVDSYKILIQ 233
Query: 460 FLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
C+ G+ + A ++ +G D SY L+ C++ Y+LL M + +P
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
D Y ++I G ++ + A + L ML + P + ++ +++ GL +G E +
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 579 VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMV--DMKELIIFLSQSR 636
++ + ++S V+ S G ++ +V ++ NG + D E++I L +
Sbjct: 354 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE 413
Query: 637 KLLEANKLLL 646
E KL L
Sbjct: 414 DESEKIKLFL 423
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 196/381 (51%), Gaps = 17/381 (4%)
Query: 106 ALKFFNWLPQ-MGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
A +FF W + GF H+ ++Y M+ IL + R + L + K G + +E F
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK--GLLTMET--FT 233
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++++ A +++V +F MK V T N LL L + A+ +FD++
Sbjct: 234 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 293
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ P+ T+ +L+ G+C+ + + R + M PDIV +N +++G+ R+ K
Sbjct: 294 F--TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD 351
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + V KS+ P+V SYT ++R +C + +++ A+ F++MVD GL+P+A Y L
Sbjct: 352 AIKLFH--VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I G +K+D + E+L+ ++ G PD T N L+ N A +++ KM++ +
Sbjct: 410 ITGFGTQKKLDTVYELLK-EMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE 468
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
++P T+++++++ ++E +++E++KKGI D+ T L+ L
Sbjct: 469 IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG-------LIGE 521
Query: 465 GKTSKAERGFRQLMKRGTQDP 485
GK+ +A R +++ +G + P
Sbjct: 522 GKSREACRYLEEMLDKGMKTP 542
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 185/383 (48%), Gaps = 18/383 (4%)
Query: 190 GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
G + T+NS++ IL K + SV +EM T G+ TF I ++ F
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
F+ M + + T N L+D + RA K A + K E P++++YT L
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD---KLKERFTPNMMTYTVL 304
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV-QKIDKIKEVLEGALEVG 368
L G+C +N+ EA ++ +M+D+GLKP+ V +N +++GL +K D IK L ++
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK--LFHVMKSK 362
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G P+ + ++ C ++ A++ F+ M++ +QPD+A Y+ L+ G ++
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKL 419
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-- 486
+ +Y ELLK+ +++ G P Y ++ + + A R + ++++ + P+
Sbjct: 420 DTVY-ELLKE---MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE-PSIH 474
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
++ +++ + +E G + M+++ PD Y LI GL+ +G+ A + L++M
Sbjct: 475 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
Query: 547 LKSSIVPTTSTFHSILAGLLKKG 569
L + ++ A + G
Sbjct: 535 LDKGMKTPLIDYNKFAADFHRGG 557
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 152/345 (44%), Gaps = 33/345 (9%)
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
D TYN+++ + + + +T +V++ M K + ++T ++ + + +A+
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKG---LLTMETFTIAMKAFAAAKERKKAVG 250
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+FE M K T N L+ L K+ K +VL L+ F+P+ T L+NG
Sbjct: 251 IFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGW 308
Query: 385 CNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
C NL EA +++ M++ ++PD ++V++ L A KL+ +++
Sbjct: 309 CRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH-------VMKS 361
Query: 445 DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEA 503
G P V +Y M + CK A F ++ G Q D Y LI G + +
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
YELL M + PD + Y +LI + + P A + KM+++ I P+ TF+ I+
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 564 G----------------LLKKGYAHESASLVVLLL----EGKIRQ 588
++KKG + S VL+ EGK R+
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 6/238 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A + +N + G + ++ +MLE L R+R + A +K K R +
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP---NVRSYT 372
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+IR + + + +++ F M G+ P + L+ + + + + EM
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM-QE 431
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G PD T+N LI+ M + R + KM +P I T+N ++ A +
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEM 491
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
V + M+KK + PD SYT L+RG + EA EEM+DKG+K + YN
Sbjct: 492 GRAVWEEMIKKG--ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 149/340 (43%), Gaps = 26/340 (7%)
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
D +Y +++ + + + V EEM KGL T+ +K ++ K +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIF 252
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
E ++ F T+N L++ A EA +F+K+ E + P+ TY+VL+ C
Sbjct: 253 E-LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCR 310
Query: 422 IGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG 481
+ + A +++++++ D G P + A+ M + L ++ K S A + F + +G
Sbjct: 311 VRNLIEAARIWNDMI-------DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 482 T-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAY 540
+ SY I+I CK+ + E E M+ PD+ +Y LI G + + Y
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 541 QTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLL 600
+ L++M + P T+++++ + + + + +++ +I ++ HT ++
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSI----HTFNMI 479
Query: 601 FSNGLRDKGFRIVGLLY-----------DNGYMVDMKELI 629
+ + + + ++ DN Y V ++ LI
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLI 519
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A+++F+ + G + Y ++ G + L+ L ++ K + + + +N+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP---DGKTYNA 443
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI+ + + + +++ M + PS+ TFN ++ M ++V++EM+
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK- 502
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
G+ PD ++ +LIRG + R+ ++M ++ YN R G+
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 210/467 (44%), Gaps = 21/467 (4%)
Query: 108 KFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
+FF W Q G+ H+ + M+ IL + R + + RK+N + +E F L
Sbjct: 116 RFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEM-RKTNPEL-IEPELFVVL 173
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
+R + A + +++V++ M G+ P F LL L K G A VF++M +
Sbjct: 174 MRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKF- 232
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
P+ F L+ G+C+ + + +M +PDIV + L+ G AGK+ A+
Sbjct: 233 -PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 291
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYC-MKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
+++ M K+ P+V YT L++ C ++ +DEA+ VF EM G + + VTY LI
Sbjct: 292 DLMNDMRKRG--FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
G C+ IDK VL+ + G P T +M H E L++ EKM
Sbjct: 350 SGFCKWGMIDKGYSVLDD-MRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
PD Y+V++R C +G+ + A +L++E+ G+ +P V + M G
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL-------SPGVDTFVIMINGFTSQG 461
Query: 466 KTSKAERGFRQLMKRGTQDPTSY---KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
+A F++++ RG Y K L+ ++ E ++ + + + +
Sbjct: 462 FLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNV 521
Query: 523 --YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
+ I L KG A M++ ++P +T+ ++ GL K
Sbjct: 522 SAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 135/299 (45%), Gaps = 11/299 (3%)
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
A VK A V+ M K L PD + LL C ++ EA VFE+M +K PN
Sbjct: 180 ANMVKKAVEVLDEMPKYG--LEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNL 236
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
+ +L+ G C K+ + KEVL E G PD L++G+ +AG + +A +
Sbjct: 237 RYFTSLLYGWCREGKLMEAKEVLVQMKE-AGLEPDIVVFTNLLSGYAHAGKMADAYDLMN 295
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
M + +P+ Y+VL++ LC R EK DE ++ + + G + Y ++
Sbjct: 296 DMRKRGFEPNVNCYTVLIQALC------RTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
CK G K + K+G +Y +++ H K+ FE EL+ M RR
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 409
Query: 518 PDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESAS 576
PD IY +I + GE A + +M + + P TF ++ G +G+ E+ +
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 155/391 (39%), Gaps = 85/391 (21%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA++ + +P+ G ++ + +L+ L + ++ A ++ K + R+F
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNL----RYFT 240
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
SL+ + R G E+ ++ MK G+ P +V F +LL G+ A + ++M
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM-RK 299
Query: 225 YGVAPDTYTFNILIRGFCKNS-MVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G P+ + +LI+ C+ +D+ R F +M + C+ DIVTY L+ G C+ G +
Sbjct: 300 RGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMID 359
Query: 284 TAHNVVKGMVKKS---------------------------------EDLNPDVVSYTTLL 310
++V+ M KK +PD++ Y ++
Sbjct: 360 KGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Query: 311 RGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE----VQKIDKIKEVLEGALE 366
R C + EA+ ++ EM GL P T+ +I G ++ + KE++
Sbjct: 420 RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR--- 476
Query: 367 VGGFS-PDTCTLNTLMN----------------------GHCN---------------AG 388
G FS P TL +L+N C G
Sbjct: 477 -GIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKG 535
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
++ EA MME + P TY+ L++ L
Sbjct: 536 HVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 135/349 (38%), Gaps = 45/349 (12%)
Query: 288 VVKGMVKKSEDLNPDVVS---YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
V G++++ NP+++ + L+R + + +A+ V +EM GL+P+ + L
Sbjct: 149 AVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCL 208
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ LC+ + + +V E E F P+ +L+ G C G L EA +V +M E
Sbjct: 209 LDALCKNGSVKEASKVFEDMRE--KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
++PD ++ L+ H G A L +++ K+G P V Y + Q LC+
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF-------EPNVNCYTVLIQALCRT 319
Query: 465 GKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
E + + V M R + D Y
Sbjct: 320 ---------------------------------EKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEG 584
+LI G + G Y L M K ++P+ T+ I+ KK E L+ +
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 585 KIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLS 633
++ + +RL G + R+ + NG + +I ++
Sbjct: 407 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMIN 455
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 124/287 (43%), Gaps = 13/287 (4%)
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
++P+ + VL+R ++A ++ DE+ K G+ P + + LCKN
Sbjct: 165 IEPE--LFVVLMRRFASANMVKKAVEVLDEMPKYGL-------EPDEYVFGCLLDALCKN 215
Query: 465 GKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
G +A + F + ++ + + L+ G C+EG E+LV M +PD ++
Sbjct: 216 GSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFT 275
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEG 584
+L+ G G+ AY + M K P + + ++ L + + A V + +E
Sbjct: 276 NLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER 335
Query: 585 -KIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYM---VDMKELIIFLSQSRKLLE 640
++ T + G+ DKG+ ++ + G M V ++++ + + E
Sbjct: 336 YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEE 395
Query: 641 ANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+L+ + + D+ + N VI CK+ ++ EA L+ E+ G
Sbjct: 396 CLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 194/381 (50%), Gaps = 17/381 (4%)
Query: 106 ALKFFNWLPQ-MGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
A +FF W + GF H ++Y M+ IL + R + L + K G + +E F
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTK--GLLTMET--FT 233
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++++ A +++V +F MK V T N LL L + A+ +FD++
Sbjct: 234 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 293
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ P+ T+ +L+ G+C+ + + R + M PDIV +N +++G+ R+ K
Sbjct: 294 F--TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 351
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + V KS+ P+V SYT ++R +C + +++ A+ F++MVD GL+P+A Y L
Sbjct: 352 AIKLFH--VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I G +K+D + E+L+ ++ G PD T N L+ N +++ KM++ +
Sbjct: 410 ITGFGTQKKLDTVYELLK-EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE 468
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
++P T+++++++ ++E ++DE++KKGI D+ T L+ L
Sbjct: 469 IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG-------LISE 521
Query: 465 GKTSKAERGFRQLMKRGTQDP 485
GK+ +A R +++ +G + P
Sbjct: 522 GKSREACRYLEEMLDKGMKTP 542
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 183/382 (47%), Gaps = 16/382 (4%)
Query: 190 GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
G + + T+NS++ IL K + SV +EM T G+ TF I ++ F
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
F+ M + + T N L+D + RA K A + K E P++++YT L
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD---KLKERFTPNMMTYTVL 304
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE-VQKIDKIKEVLEGALEVG 368
L G+C +N+ EA ++ +M+D GLKP+ V +N +++GL ++K D IK L ++
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK--LFHVMKSK 362
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G P+ + ++ C ++ A++ F+ M++ +QPD+A Y+ L+ G ++
Sbjct: 363 GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKL 419
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-S 487
+ +Y ELLK+ +++ G P Y ++ + + R + ++++ + +
Sbjct: 420 DTVY-ELLKE---MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 475
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
+ +++ + +E G + M+++ PD Y LI GL+ +G+ A + L++ML
Sbjct: 476 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 535
Query: 548 KSSIVPTTSTFHSILAGLLKKG 569
+ ++ A + G
Sbjct: 536 DKGMKTPLIDYNKFAADFHRGG 557
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 150/342 (43%), Gaps = 33/342 (9%)
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
TYN+++ + + + +T +V++ M K + ++T ++ + + +A+ +FE
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKG---LLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
M K T N L+ L K+ K +VL L+ F+P+ T L+NG C
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRV 311
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
NL EA +++ M++ ++PD ++V++ L A KL+ +++ G
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-------VMKSKGP 364
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYE 506
P V +Y M + CK A F ++ G Q D Y LI G + + YE
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 507 LLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG-- 564
LL M + PD + Y +LI + + P + KM+++ I P+ TF+ I+
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 565 --------------LLKKGYAHESASLVVLLL----EGKIRQ 588
++KKG + S VL+ EGK R+
Sbjct: 485 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 106/260 (40%), Gaps = 41/260 (15%)
Query: 118 FTHNDQSYFLMLEILGRARNL-NVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
FT N +Y ++L R RNL AR + I + + L+RS ++
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS--- 350
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST------------ 224
+++KLF MKS G P+V ++ ++ K+ A FD+M+ +
Sbjct: 351 -DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 225 ----------------------YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNC 262
G PD T+N LI+ M + G R + KM
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 263 DPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEA 322
+P I T+N ++ A + V M+KK + PD SYT L+RG + EA
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG--ICPDDNSYTVLIRGLISEGKSREA 527
Query: 323 LVVFEEMVDKGLKPNAVTYN 342
EEM+DKG+K + YN
Sbjct: 528 CRYLEEMLDKGMKTPLIDYN 547
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 171/414 (41%), Gaps = 43/414 (10%)
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGA 364
+Y +++ + + + V EEM KGL T+ +K ++ K + E
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFE-L 254
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
++ F T+N L++ A EA +F+K+ E + P+ TY+VL+ C + +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRN 313
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQ 483
A +++++++ D G P + A+ M + L ++ K S A + F + +G
Sbjct: 314 LIEAARIWNDMI-------DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 366
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
+ SY I+I CK+ + E E M+ PD+ +Y LI G + + Y+ L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSN 603
++M + P T+++++ + + + +++ +I ++ HT ++ +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI----HTFNMIMKS 482
Query: 604 GLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTV 663
+ + + ++D E+I +K D + +
Sbjct: 483 YFVARNYEMGRAVWD--------EMI--------------------KKGICPDDNSYTVL 514
Query: 664 IEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKR 717
I GL K EA E+++KG PL GG+ + E L++R
Sbjct: 515 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A+++F+ + G + Y ++ G + L+ L ++ K + + + +N+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP---DGKTYNA 443
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI+ + + +++ M + PS+ TFN ++ M ++V+DEM+
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK- 502
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
G+ PD ++ +LIRG + R+ ++M ++ YN R G+
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 190/384 (49%), Gaps = 12/384 (3%)
Query: 148 IKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK 207
IK S +K E +N++I +Y + F + MK GV + VT+ L+ + +K
Sbjct: 247 IKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVK 306
Query: 208 RGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIV 267
G+ + A+ +FDEM G+ D + + LI C+ + F F +++ P
Sbjct: 307 NGKMSDAEKLFDEMRER-GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
TY L+DGVC+ G++ A ++ M +S+ +N V + TL+ GYC K +DEA ++++
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEM--QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
M KG + + T NT+ +++ D+ K+ L +E GG T + L++ +C
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME-GGVKLSTVSYTNLIDVYCKE 482
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
GN+ EA ++F +M VQP++ TY+V++ C G + A KL + +G
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN-------MEANGM 535
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYE 506
P Y S+ C +A R F ++ +G Q+ +Y ++I G K G + +
Sbjct: 536 DPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFG 595
Query: 507 LLVLMLRRNFDPDSEIYQSLIDGL 530
L M R+ + D+++Y +LI +
Sbjct: 596 LYDEMKRKGYTIDNKVYTALIGSM 619
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 174/340 (51%), Gaps = 7/340 (2%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
G +N +Y L++E+ + ++ A ++ + ++ + + SLI R G
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG---IESDVHVYTSLISWNCRKGNM 345
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
+ + LF + G+SPS T+ +L+ + K G A+ + +EM S GV FN
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK-GVNITQVVFNT 404
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
LI G+C+ MVD+ + M D+ T NT+ R + A + M++
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
L+ VSYT L+ YC + N++EA +F EM KG++PNA+TYN +I C+ KI +
Sbjct: 465 VKLS--TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
++ L +E G PD+ T +L++G C A N++EA+++F +M + +S TY+V++
Sbjct: 523 ARK-LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
L G + A LYDE+ +KG + + T L+ + S
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 200/446 (44%), Gaps = 43/446 (9%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
+ R Y G+F+E +++F M G+S + L+ KR R ++ +F M+ +
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS- 218
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
GV Y+ I++ G C+ V+ + ++ S P+ TYNT+++ +
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 286 HNVVKGMVK---------------------------------KSEDLNPDVVSYTTLLRG 312
V+K M K + + DV YT+L+
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 313 YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
C K N+ A ++F+E+ +KGL P++ TY LI G+C+V ++ E+L ++ G +
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA-AEILMNEMQSKGVNI 397
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
NTL++G+C G ++EA +++ M + Q D T + + + ++ A++
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKIL 491
+++ G+ L T L+ Y CK G +A+R F ++ +G Q + +Y ++
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVY-------CKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
I +CK+G + +L M DPDS Y SLI G A + +M +
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 552 VPTTSTFHSILAGLLKKGYAHESASL 577
+ T+ +++GL K G + E+ L
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAFGL 596
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 202/475 (42%), Gaps = 50/475 (10%)
Query: 235 NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVK 294
+++ R + N M ++G R F M D + + + ++ + + MV
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
+ V S T ++ G C + ++++ + +E KG+KP A TYNT+I + +
Sbjct: 218 SGVKIT--VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
++ VL+ ++ G + T LM G +++A K+F++M E ++ D Y+
Sbjct: 276 SGVEGVLK-VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTS 334
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ C G+ +RA L+DEL +KG+ +P Y ++ +CK G+ AE
Sbjct: 335 LISWNCRKGNMKRAFLLFDELTEKGL-------SPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 475 RQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
++ +G + LI G+C++G + + +M ++ F D ++ +
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 534 GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL----------- 582
A Q L +M++ + +T ++ +++ K+G E+ L V +
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
Query: 583 ---------EGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELI-IFL 632
+GKI++ L + + +NG+ + L++ ++ E + +F
Sbjct: 508 NVMIYAYCKQGKIKEARKLRAN----MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 633 SQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
K L+ N + +I GL K K EAFGLY E+ KG
Sbjct: 564 EMGLKGLDQNSVTY--------------TVMISGLSKAGKSDEAFGLYDEMKRKG 604
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 210/449 (46%), Gaps = 45/449 (10%)
Query: 106 ALKFFNWLPQMG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+L+FFNW +H+ +++ ++L L + R A + L + NG V L + F+
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVL--VNGGVDLPAKVFD 155
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+L+ SY + +P V F+SL + A F +M
Sbjct: 156 ALLYSY----------------RECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQM-KD 196
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
YG P + N + VD RF+++M P+ T N ++ G CR+GK+
Sbjct: 197 YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 285 AHNVVKGMVK---KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+++ M + ++ D VSY TL+ G+C K + AL + M GL+PN VT+
Sbjct: 257 GIELLQDMERLGFRATD-----VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
NTLI G C K+ + +V G ++ +P+T T NTL+NG+ G+ A + +E M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVF-GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+Q D TY+ L+ LC +A + EL K+ ++ + L+ M Q +
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI-----MGQCV 425
Query: 462 CKNGKTSKAERGF---RQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
KN A+RGF + +++ G + ++ +L+ C+ F+ ++L M+RR+
Sbjct: 426 RKN-----ADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 518 PDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
DS + +GL +G+ L + LQ+M
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 193/417 (46%), Gaps = 29/417 (6%)
Query: 162 FFN-SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
FFN + R+ G L ++ L T K+ + S+L +L G ++ VFD
Sbjct: 101 FFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSA----ESILRDVLVNGGVDLPAKVFDA 156
Query: 221 MLSTYGVAPDT-YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
+L +Y T F+ L + F + F +M + P + + N + +
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ 216
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
G+V A + M + ++P+ + ++ GYC +D+ + + ++M G + V
Sbjct: 217 GRVDIALRFYREM--RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEV------GGFSPDTCTLNTLMNGHCNAGNLNEA 393
+YNTLI G CE K +L AL++ G P+ T NTL++G C A L EA
Sbjct: 275 SYNTLIAGHCE-------KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
KVF +M V P++ TY+ L+ GD E A + Y++++ GI RD +
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI-QRD------ILT 380
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLML 512
Y ++ LCK KT KA + ++L K + +++ LI+G C + G+EL M+
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 513 RRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
R P+ + + L+ + + A Q L++M++ SI + T H + GL +G
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 124/309 (40%), Gaps = 15/309 (4%)
Query: 388 GNLNEALKVFEKMMEWKVQPDSA--TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
G ++ KVF+ ++ + DS + L + H+ F A + + ++D
Sbjct: 145 GGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTF-------MQMKDY 197
Query: 446 GSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILII--GHCKEGTFEA 503
G P V + + L G+ A R +R+ M+R P Y + ++ G+C+ G +
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYRE-MRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
G ELL M R F Y +LI G +KG A + M KS + P TF++++
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 564 GLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMV 623
G + E++ + + + N + G + FR + NG
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 624 DM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLY 680
D+ LI L + K +A + + +++ + + +I G C K F LY
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELY 436
Query: 681 YELVEKGNH 689
++ G H
Sbjct: 437 KSMIRSGCH 445
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 196/399 (49%), Gaps = 54/399 (13%)
Query: 134 RARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLF---------- 183
++ NL+ A++ SI S + L+ +F NS+++SYG + ++VKLF
Sbjct: 61 KSPNLSDAKSLFNSIAATSR--IPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNF 118
Query: 184 -------------------TSMKSV----------GVSPSVVTFNSLLLILLKRGRTNMA 214
+S+ +V G+ P VT + + L + GR + A
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEA 178
Query: 215 KSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM-SSFNCDPDIVTYNTLV 273
K + E+ + PDTYT+N L++ CK + + F +M F+ PD+V++ L+
Sbjct: 179 KDLMKELTEKHS-PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
D VC + ++ A +V + + PD Y T+++G+C EA+ V+++M ++G
Sbjct: 238 DNVCNSKNLREAMYLVSKL--GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
++P+ +TYNTLI GL + ++++ + L+ ++ G+ PDT T +LMNG C G A
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD-AGYEPDTATYTSLMNGMCRKGESLGA 354
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
L + E+M P+ TY+ L+ LC ++ +LY+ + G+ L +G
Sbjct: 355 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG------- 407
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKIL 491
Y ++ + L K+GK ++A F + + D ++Y L
Sbjct: 408 YATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 6/336 (1%)
Query: 100 IKVPSKALKFFNWL--PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVK 157
I V + +K F + Q F ++ ++L RA + +++ N + N ++
Sbjct: 98 IAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSIS-NVHRVLNLMVNNGLE 156
Query: 158 LEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSV 217
+ + +RS G E+ L + P T+N LL L K ++
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 218 FDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVC 277
DEM + V PD +F ILI C + + + K+ + PD YNT++ G C
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 278 RAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPN 337
K A V K M K E + PD ++Y TL+ G ++EA + + MVD G +P+
Sbjct: 277 TLSKGSEAVGVYKKM--KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
TY +L+ G+C + +LE +E G +P+ CT NTL++G C A +++ ++++
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLE-EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELY 393
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
E M V+ +S Y+ LVR+L G A +++D
Sbjct: 394 EMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 169/388 (43%), Gaps = 49/388 (12%)
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM--SSFNCDPDIVTYNT 271
AKS+F+ + +T + D N +++ + ++V+D + FQ + S N P T+
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 272 LVDGVCRA--GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
L+ CRA + H V+ MV L PD V+ +R C +DEA + +E+
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNG--LEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE--------------------------- 362
+K P+ TYN L+K LC+ + + + E ++
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 363 --------GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
L GF PD NT+M G C +EA+ V++KM E V+PD TY+
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ L G E A ++Y LK + D G P A Y S+ +C+ G++ A
Sbjct: 306 LIFGLSKAGRVEEA-RMY---LKTMV---DAGYEPDTATYTSLMNGMCRKGESLGALSLL 358
Query: 475 RQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
++ RG + +Y L+ G CK + G EL +M +S Y +L+ L++
Sbjct: 359 EEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKS 418
Query: 534 GEPLLAYQTLQKMLKSSIVPTTSTFHSI 561
G+ AY+ + S + S + ++
Sbjct: 419 GKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 145/391 (37%), Gaps = 79/391 (20%)
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMV--DKGLKPNAVTYNTLIKGLCEV--QKIDKI 357
D+ + ++L+ Y +++ + +F+ ++ +P T+ L+ C I +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 358 KEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
VL + G PD T + + C G ++EA + +++ E PD+ TY+ L++
Sbjct: 144 HRVLNLMVN-NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 418 NLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL 477
+LC D + DE+ RDD F K
Sbjct: 203 HLCKCKDLHVVYEFVDEM-------RDD--------------FDVK-------------- 227
Query: 478 MKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
D S+ ILI C L+ + F PD +Y +++ G +
Sbjct: 228 -----PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 538 LAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTV 597
A +KM + + P T+++++ GL K G E+ + +++ + +T+T
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT--ATYTS 340
Query: 598 RLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
+ NG+ KG + L LLE +E
Sbjct: 341 LM---NGMCRKGESLGAL---------------------SLLEE-------MEARGCAPN 369
Query: 658 DMC-NTVIEGLCKMKKLSEAFGLYYELVEKG 687
D NT++ GLCK + + + LY + G
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSG 400
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 234/523 (44%), Gaps = 19/523 (3%)
Query: 107 LKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
++FF W + F H+ +Y ++ L AR + + R N V + +
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVR--NTYVSVSPAVLSE 167
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
L+++ GRA + +++ +F K P+ T+NS++L+L++ G+ V+ EM +
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
PDT T++ LI + K D R F +M P Y TL+ + GKV+ A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ + M K +P V +YT L++G +DEA +++M+ GL P+ V N L+
Sbjct: 288 LDLFEEM--KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGF--SPDTCTLNTLMNGHCNA-GNLNEALKVFEKMME 402
L +V +++++ V E+G + +P + NT++ + +++E F+KM
Sbjct: 346 NILGKVGRVEELTNVFS---EMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V P TYS+L+ C E+A L +E+ +KG P AAY S+ L
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF-------PPCPAAYCSLINALG 455
Query: 463 KNGKTSKAERGFRQLMKR-GTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K + A F++L + G Y ++I K G +L M + PD
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
Y +L+ G+++ G A L+KM ++ ++ + IL G + G + + +
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI 575
Query: 582 LEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD 624
I+ + + G+ ++ R++ + D G+ D
Sbjct: 576 KHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 187/407 (45%), Gaps = 52/407 (12%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+++LI SY + G +++LF MK + P+ + +LL I K G+ A +F+EM
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G +P YT+ LI+G K VD+ + F++ M PD+V N L++ + + G+V
Sbjct: 296 RA-GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 283 KTAHNVVK--GMVKKSEDLNPDVVSYTTLLRG-YCMKQNIDEALVVFEEMVDKGLKPNAV 339
+ NV GM + P VVSY T+++ + K ++ E F++M + P+
Sbjct: 355 EELTNVFSEMGMWR----CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
TY+ LI G C+ +++K +LE ++ GF P +L+N A A ++F++
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLE-EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
+ E S Y+V++++ G A L++E+ ++ GS P V AY ++
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM-------KNQGSGPDVYAYNALMS 522
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGT------------------ 500
+ K G ++A R++ + G + D S+ I++ G + G
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 501 -----------------FEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
FE ++ M + F+ D+ Y S++D +
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 169/336 (50%), Gaps = 8/336 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KAL F + + G + +Y +++ LG+A ++ A F + R + + F N
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG---LTPDVVFLN 342
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK-RGRTNMAKSVFDEMLS 223
+L+ G+ G +E +F+ M +P+VV++N+++ L + + + S FD+M +
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
V+P +T++ILI G+CK + V+ ++M P Y +L++ + +A + +
Sbjct: 403 D-SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A+ + K + + +++ V Y +++ + + EA+ +F EM ++G P+ YN
Sbjct: 462 AANELFKELKENFGNVSSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L+ G+ + I++ +L +E G D + N ++NG G A+++FE +
Sbjct: 520 LMSGMVKAGMINEANSLLR-KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
++PD TY+ L+ H G FE A ++ E+ KG
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 6/206 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KAL + + GF +Y ++ LG+A+ A N LF +++ G V R +
Sbjct: 427 KALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA-NELFKELKENFGNVS--SRVYA 483
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+I+ +G+ G E+V LF MK+ G P V +N+L+ ++K G N A S+ +M
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G D + NI++ GF + + F+ + PD VTYNTL+ AG +
Sbjct: 544 -GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLL 310
A +++ M K + D ++Y+++L
Sbjct: 603 AARMMREM--KDKGFEYDAITYSSIL 626
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 192/461 (41%), Gaps = 44/461 (9%)
Query: 261 NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSE-DLNPDVVSYTTLLRGYCMKQNI 319
N D TY TL+ + A + ++ +V+ + ++P V+S L++ + +
Sbjct: 121 NFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLS--ELVKALGRAKMV 178
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
+AL VF + + KP + TYN++I L + + +K+ EV G PDT T +
Sbjct: 179 SKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
L++ + G + A+++F++M + +QP Y+ L+ +G E+A L++E+ +
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA- 297
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKE 498
G +P V Y + + L K G+ +A ++ +++ G T D L+ K
Sbjct: 298 ------GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 499 GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ-KGEPLLAYQTLQKMLKSSIVPTTST 557
G E + M P Y ++I L + K KM S+ P+ T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLY 617
+ ++ G K ++ +LLLE + +KGF Y
Sbjct: 412 YSILIDGYCKTNRVEKA----LLLLEE--------------------MDEKGFPPCPAAY 447
Query: 618 DNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAF 677
+ LI L ++++ AN+L E N+ + +I+ K KLSEA
Sbjct: 448 CS--------LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 678 GLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRM 718
L+ E+ +G+ + L + G E L ++M
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 195/410 (47%), Gaps = 22/410 (5%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVG------VSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
LI + ++ E++++F M+ + + FN+L+ L K GR A+ +
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
M AP+ T+N LI G+C+ ++ +M P++VT NT+V G+CR
Sbjct: 395 RMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
+ A VV M + E + +VV+Y TL+ C N+++A+ +E+M++ G P+A
Sbjct: 455 HGLNMA--VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
Y LI GLC+V++ V+E L+ GGFS D N L+ C+ N + ++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVE-KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 571
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M + +PDS TY+ L+ DFE E++ ++ +R+DG P V Y ++
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ-------MREDGLDPTVTTYGAVID 624
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
C G+ +A + F+ + +P + Y ILI K G F L M +
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 518 PDSEIYQSLIDGLLQK--GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
P+ E Y +L L +K GE LL + + +M++ S P T ++ L
Sbjct: 685 PNVETYNALFKCLNEKTQGETLL--KLMDEMVEQSCEPNQITMEILMERL 732
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 196/462 (42%), Gaps = 51/462 (11%)
Query: 171 GRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSV------------- 217
GR ++ + L + S GVSP+ V + L K R N A +
Sbjct: 235 GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEA 294
Query: 218 --FDEMLSTYG-------------------VAPDTYTFNILIRGFCKNSMVDDGFRFFQK 256
F+ +LS G + PD T ILI CK+ VD+ F+K
Sbjct: 295 PPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEK 354
Query: 257 MSSFNCD------PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLL 310
M D D + +NTL+DG+C+ G++K A ++ M K E P+ V+Y L+
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERCAPNAVTYNCLI 413
Query: 311 RGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGF 370
GYC ++ A V M + +KPN VT NT++ G+C ++ + V +E G
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN-MAVVFFMDMEKEGV 472
Query: 371 SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEK 430
+ T TL++ C+ N+ +A+ +EKM+E PD+ Y L+ LC + A +
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYK 489
+ ++L + G L + AY + C T K + K G + D +Y
Sbjct: 533 VVEKLKEGGFSLD-------LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYN 585
Query: 490 ILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM-LK 548
LI K FE+ ++ M DP Y ++ID GE A + + M L
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLH 645
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
S + P T ++ ++ K G ++ SL + +R NV
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 143/323 (44%), Gaps = 40/323 (12%)
Query: 156 VKLEDRF------FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
+KLE+R +N LI Y RAG + + ++ + MK + P+VVT N+++ + +
Sbjct: 396 MKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
NMA F +M GV + T+ LI C S V+ +++KM C PD Y
Sbjct: 456 GLNMAVVFFMDM-EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVK---------------------------------KS 296
L+ G+C+ + A VV+ + + +
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEK 574
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
E PD ++Y TL+ + ++ + + E+M + GL P TY +I C V ++D+
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
++ + +P+T N L+N GN +AL + E+M V+P+ TY+ L
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 417 RNLCHIGDFERAEKLYDELLKKG 439
+ L E KL DE++++
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQS 717
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 134/633 (21%), Positives = 252/633 (39%), Gaps = 83/633 (13%)
Query: 95 QVLRLIKVPSKALKFFNWLP--QMGFTHNDQSYFLML----EILGRARNLNVARNFLFSI 148
Q+ R + S A+ FF +L ++S L L E G + L+ I
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEI 142
Query: 149 KRKSNGTVKLEDRFFNSLIRSYGRAGLFQESV----KLFTSMKSVGVSPSVVTFNSLLLI 204
++ N + L N LIR +GR G+ +SV +L ++MK+ V VV +
Sbjct: 143 AKEKN--IPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVD------V 194
Query: 205 LLKRGRTNMAKSVFDEMLSTYGV-APDTYTFNILIRGFCKNSMVDDG--FRFFQKMSSFN 261
LL+ G + A V DEML V P+ T +I++ K ++ + + SS
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHG 254
Query: 262 CDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDE 321
P+ V + +C+ + A +++ ++K L + + LL C+ +N+D
Sbjct: 255 VSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPL--EAPPFNALLS--CLGRNMDI 310
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLM 381
+ + N L V K+D++K PD TL L+
Sbjct: 311 SRM-----------------NDL------VLKMDEVK-----------IRPDVVTLGILI 336
Query: 382 NGHCNAGNLNEALKVFEKMMEWK------VQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
N C + ++EAL+VFEKM + ++ DS ++ L+ LC +G + AE EL
Sbjct: 337 NTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE----EL 392
Query: 436 LKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILII-- 493
L + L ++ P Y + C+ GK A ++++ R +D ++ +
Sbjct: 393 LVRMKL--EERCAPNAVTYNCLIDGYCRAGKLETA----KEVVSRMKEDEIKPNVVTVNT 446
Query: 494 ---GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSS 550
G C+ + M + + Y +LI A +KML++
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 551 IVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
P ++++++GL + H++ +V L EG ++ + L +K +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Query: 611 RIVGLLYDNGYMVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGL 667
++ + G D LI F + + +++ E + + VI+
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 668 CKMKKLSEAFGLYYELVEKGNHQPLSCLENLRV 700
C + +L EA L+ ++ P + + N+ +
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILI 659
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 125/260 (48%), Gaps = 7/260 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA+ ++ + + G + + + Y+ ++ L + R + A + +++ G L+ +N
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA---IRVVEKLKEGGFSLDLLAYN 550
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI + ++ ++ T M+ G P +T+N+L+ K + + ++M
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFN-CDPDIVTYNTLVDGVCRAGKVK 283
G+ P T+ +I +C +D+ + F+ M + +P+ V YN L++ + G
Sbjct: 611 -GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A ++ + M K + + P+V +Y L + K + L + +EMV++ +PN +T
Sbjct: 670 QALSLKEEM--KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 344 LIKGLCEVQKIDKIKEVLEG 363
L++ L ++ K+++ ++G
Sbjct: 728 LMERLSGSDELVKLRKFMQG 747
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 178/393 (45%), Gaps = 54/393 (13%)
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
+ P +FN ++ G+CK VD FF + P + ++N L++G+C G + A
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
+ M K + PD V+Y L +G+ + I A V +M+DKGL P+ +TY L+
Sbjct: 278 ELASDMNKHG--VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 347 GLCEVQKIDK----IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
G C++ ID +K++L E+ P C++ +++G C G ++EAL +F +M
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIP--CSV--MLSGLCKTGRIDEALSLFNQMKA 391
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ PD YS+++ LC +G F+ A LYDE+ K IL P + ++ LC
Sbjct: 392 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL-------PNSRTHGALLLGLC 444
Query: 463 KNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
+ G +A L+ G T D Y I+I G+ K G E EL +++ P
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 504
Query: 522 IYQSLIDG------------------LLQKGEPLLAYQTL-----------------QKM 546
+ SLI G L +++Y TL ++M
Sbjct: 505 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Query: 547 LKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
I PT T+ I GL +G+ HE+ + V+
Sbjct: 565 KAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVL 596
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 208/489 (42%), Gaps = 80/489 (16%)
Query: 121 NDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESV 180
N+ +Y +++ L R + L A FL + + K G + FNS++ Y + G +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS---FNSIMSGYCKLGFVDMAK 242
Query: 181 KLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRG 240
F ++ G+ PSV + N L+ L G A + +M + +GV PD+ T+NIL +G
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKG 301
Query: 241 FCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLN 300
F M+ + + M PD++TY L+ G C+ G + ++K M+ + +LN
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI--- 357
++ + +L G C IDEAL +F +M GL P+ V Y+ +I GLC++ K D
Sbjct: 362 S-IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 358 ------KEVL-----EGALEVG--------------------GFSPDTCTLNTLMNGHCN 386
K +L GAL +G G + D N +++G+
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 387 AGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL----- 441
+G + EAL++F+ ++E + P AT++ L+ C + A K+ D + G+
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 442 -----------------------LRDDGSTPLVAAYKSMFQFLCKNGKTS---------- 468
++ +G P Y +F+ LC+ K
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 469 --KAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQS 525
K ++G R + G D +Y +I C+ + L +M RN D S Y
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 526 LIDGLLQKG 534
LID L G
Sbjct: 661 LIDSLCVYG 669
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 160/327 (48%), Gaps = 14/327 (4%)
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
TY+T+VDG+CR K++ A V+ + +D+ P VVS+ +++ GYC +D A F
Sbjct: 189 TYSTVVDGLCRQQKLEDA--VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG--GFSPDTCTLNTLMNGHC 385
++ GL P+ ++N LI GLC V I E LE A ++ G PD+ T N L G
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLV---GSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
G ++ A +V M++ + PD TY++L+ C +G+ + L ++L +G L
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS- 362
Query: 446 GSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAG 504
+ M LCK G+ +A F Q+ G + D +Y I+I G CK G F+
Sbjct: 363 -----IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 505 YELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
L M + P+S + +L+ GL QKG L A L ++ S ++ ++ G
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 565 LLKKGYAHESASLVVLLLEGKIRQNVT 591
K G E+ L +++E I +V
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVA 504
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 198/451 (43%), Gaps = 87/451 (19%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL------------LILLK--- 207
+N L + + G+ + ++ M G+SP V+T+ LL L+LLK
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 208 ---------------------RGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSM 246
GR + A S+F++M + G++PD ++I+I G CK
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGK 413
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
D + +M P+ T+ L+ G+C+ G + A +++ ++ E L D+V Y
Sbjct: 414 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL--DIVLY 471
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
++ GY I+EAL +F+ +++ G+ P+ T+N+LI G C+ Q I + +++L+ ++
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD-VIK 530
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
+ G +P + TLM+ + N GN ++ +M + P + TYSV+ + LC E
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 427 RAEKLYDELL----KKGILLRD---DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK 479
+ E + K+G LRD +G P Y ++ Q+LC+ S A F ++MK
Sbjct: 591 NCNHVLRERIFEKCKQG--LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFV-FLEIMK 647
Query: 480 RGTQDPTS-------------------------------------YKILIIGHCKEGTFE 502
D +S Y LI HC +G E
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 503 AGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
+L +L R F+ Y ++I+ L ++
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 186/407 (45%), Gaps = 26/407 (6%)
Query: 246 MVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVS 305
MVDD +KM N + +YN+++ K+ +V K + K+E +
Sbjct: 139 MVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIKDKNEH------T 189
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
Y+T++ G C +Q +++A++ K + P+ V++N+++ G C++ +D K L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
+ G P + N L+NG C G++ EAL++ M + V+PDS TY++L + +G
Sbjct: 250 KCG-LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-- 483
A ++ ++L KG+ +P V Y + C+ G + ++ RG +
Sbjct: 309 SGAWEVIRDMLDKGL-------SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 484 --DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQ 541
P S +++ G CK G + L M PD Y +I GL + G+ +A
Sbjct: 362 SIIPCS--VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 542 TLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLF 601
+M I+P + T ++L GL +KG E+ SL+ L+ ++ L +
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 602 SNGLRDKGFRIVGLLYDNGY---MVDMKELIIFLSQSRKLLEANKLL 645
+G ++ + ++ + G + LI +++ + EA K+L
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 171/395 (43%), Gaps = 49/395 (12%)
Query: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
K ++LN SY ++L + + D+ V++E+ DK N TY+T++ GLC QK+
Sbjct: 151 KDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKL 203
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
+ L + E P + N++M+G+C G ++ A F +++ + P ++++
Sbjct: 204 EDAVLFLRTS-EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ LC +G A +L ++ K G+ P Y + + G S A
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGV-------EPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 475 RQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQS-LIDGLLQ 532
R ++ +G + D +Y IL+ G C+ G + G LL ML R F+ +S I S ++ GL +
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 533 KGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTL 592
G A +M + P + ++ GL K G + L + + +I N
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS-- 433
Query: 593 STHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKH 652
TH LL GL KG LLEA LL +
Sbjct: 434 RTHGALLL---GLCQKGM---------------------------LLEARSLLDSLISSG 463
Query: 653 HNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+DI + N VI+G K + EA L+ ++E G
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 122/256 (47%), Gaps = 16/256 (6%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+AL+ F + + G T + ++ ++ + +N+ AR L IK + +
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS---YT 542
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM--- 221
+L+ +Y G + +L MK+ G+ P+ VT++ + L + + V E
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 222 --------LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
+ + G+ PD T+N +I+ C+ + F F + M S N D TYN L+
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
D +C G ++ A + + + +++ L+ +YTTL++ +C+K + + A+ +F +++ +G
Sbjct: 663 DSLCVYGYIRKADSFIYSLQEQNVSLSK--FAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 334 LKPNAVTYNTLIKGLC 349
+ Y+ +I LC
Sbjct: 721 FNVSIRDYSAVINRLC 736
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 203/461 (44%), Gaps = 25/461 (5%)
Query: 127 LMLEILGRARNLNVARNF---LFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLF 183
L+ EIL R L +AR F + S R N V + IR Y G F + +L
Sbjct: 242 LLKEIL-RVHGLELAREFVEHMLSRGRHLNAAV------LSLFIRKYCSDGYFDKGWELL 294
Query: 184 TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK 243
MK G+ P +V F + L K G A SV + L +G++ D+ + + +I GFCK
Sbjct: 295 MGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK-LKLFGISQDSVSVSSVIDGFCK 353
Query: 244 NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDV 303
++ + SF P+I Y++ + +C G + A + + + + L PD
Sbjct: 354 VGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELG--LLPDC 408
Query: 304 VSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEG 363
V YTT++ GYC D+A F ++ G P+ T LI I + V
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
++ G D T N LM+G+ LN+ ++ ++M + PD ATY++L+ ++ G
Sbjct: 469 -MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA-ERGFRQLMKRGT 482
+ A ++ EL+++G + P A+ + K G +A F R
Sbjct: 528 YIDEANEIISELIRRGFV-------PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 483 QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQT 542
D + L+ G+CK E L +L PD +Y +LI G G+ A +
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 543 LQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
+ M++ ++P ST H+++ GL K + + +LL E
Sbjct: 641 IGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEE 681
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/540 (22%), Positives = 233/540 (43%), Gaps = 35/540 (6%)
Query: 103 PSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNV-ARNFLFSIKRKSNG-----T 155
S L FF W +G H+ +S M+ IL N+N A + L + +K +G
Sbjct: 126 ASIVLYFFRWSELWIGVEHSSRSISRMIHILVSG-NMNYRAVDMLLCLVKKCSGEERSLC 184
Query: 156 VKLEDRF------------FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLL 203
+ ++D F F+ LI R ++KL + G+ PS SLL
Sbjct: 185 LVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLK 244
Query: 204 ILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD 263
+L+ +A+ + MLS G + ++ IR +C + D G+ M +
Sbjct: 245 EILRVHGLELAREFVEHMLSR-GRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIR 303
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEAL 323
PDIV + +D +C+AG +K A +V+ + K ++ D VS ++++ G+C +EA+
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKL--KLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 324 VVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG 383
+ L+PN Y++ + +C + + + + E+G PD T+++G
Sbjct: 362 KLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELG-LLPDCVCYTTMIDG 417
Query: 384 HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR 443
+CN G ++A + F +++ P T ++L+ G AE ++ + +G+ L
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 444 DDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFE 502
V Y ++ K + +K ++ G + D +Y ILI G +
Sbjct: 478 -------VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 503 AGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
E++ ++RR F P + + +I G ++G+ A+ M + P T ++L
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 563 AGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYM 622
G K ++ L LL+ ++ +V L + S G +K ++GL+ G +
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 172/379 (45%), Gaps = 48/379 (12%)
Query: 112 WLPQMGFTH-----NDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
W MG H + ++ + ++ L +A L A + LF +K + + +S+
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG---ISQDSVSVSSV 347
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
I + + G +E++KL S + + P++ ++S L + G A ++F E+ G
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL-G 403
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
+ PD + +I G+C D F++F + P + T L+ R G + A
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
+V + M K+E L DVV+Y L+ GY +++ + +EM G+ P+ TYN LI
Sbjct: 464 SVFRNM--KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 347 GLCEVQKIDKIKEVLEGALE-------------VGGFS---------------------P 372
+ ID+ E++ + +GGFS P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
D T + L++G+C A + +A+ +F K+++ ++PD Y+ L+ C +GD E+A +L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 433 DELLKKGILLRDDGSTPLV 451
++++G+L + LV
Sbjct: 642 GLMVQRGMLPNESTHHALV 660
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 211/469 (44%), Gaps = 37/469 (7%)
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
F+ILI + V+ + K+ F P +L+ + R ++ A V+ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
+ + LN V+S +R YC D+ + M G++P+ V + I LC+
Sbjct: 263 LSRGRHLNAAVLS--LFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+ + VL L++ G S D+ +++++++G C G EA+K+ ++++P+ Y
Sbjct: 321 FLKEATSVL-FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS---FRLRPNIFVY 376
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
S + N+C GD RA ++ E+ + G+L P Y +M C G+T KA +
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLL-------PDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 473 GFRQLMKRGTQDPTSYKILIIGHCKE-GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
F L+K G + ++IG C G+ + M D Y +L+ G
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 532 QKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVT 591
+ + ++ + +M + I P +T++ ++ ++ +GY E+ ++ L IR+
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL----IRRGFV 545
Query: 592 LSTHTVRLLFSN---GLRDKG-FRIVGLLYDNGYMVDMK---------ELIIFLSQSRKL 638
ST L F++ G +G F+ +L+ YM D++ L+ +++++
Sbjct: 546 PST----LAFTDVIGGFSKRGDFQEAFILW--FYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 639 LEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+A L L+ D+ + NT+I G C + + +A L +V++G
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 218/504 (43%), Gaps = 43/504 (8%)
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
G V+L + S I + ++G+ +V++F M+ +N + +L++ R +
Sbjct: 6 GAVRLA---YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFEL 62
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A++++ +M G + +T++ I G CK D M + PDI +N +
Sbjct: 63 AEAIYWDM-KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYL 121
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
D +CR KV A MV++ + PDVVSYT L+ G + +A+ ++ M+ G
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGRE--PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG 179
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+ P+ L+ GLC +K+D E++ ++ T N L++G C AG + +A
Sbjct: 180 VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL--- 450
+ M + +PD TY+VL+ +RAE + E+++ GI L L
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKR 299
Query: 451 -------------------------VAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQD 484
V +Y ++ + C+ T KA R F ++ ++G +
Sbjct: 300 HCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN 359
Query: 485 PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
+Y LI +EG +LL M PD Y +++D L + G AY
Sbjct: 360 VVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFN 419
Query: 545 KMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNG 604
M++ I P +++S+++GL + G E+ + L E + T + +
Sbjct: 420 DMIEHEITPDAISYNSLISGLCRSGRVTEA----IKLFEDMKGKECCPDELTFKFIIGGL 475
Query: 605 LRDK----GFRIVGLLYDNGYMVD 624
+R K +++ + D G+ +D
Sbjct: 476 IRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 161/377 (42%), Gaps = 29/377 (7%)
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLM 381
A ++ +M G TY+ I GLC+V+K D I +L +E GF PD N +
Sbjct: 63 AEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSD-METLGFIPDIWAFNVYL 121
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
+ C + A++ F M++ +PD +Y++L+ L G A ++++ +++ G+
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS 181
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK--RGTQDPTSYKILIIGHCKEG 499
+ LV LC K A + +K R Y LI G CK G
Sbjct: 182 PDNKACAALVVG-------LCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 500 TFEAGYELLVLMLRRNFDPDSEIYQSLID-----GLLQKGEPLLAYQTLQKMLKSSIVPT 554
E L M + +PD Y L++ +L++ E ++A +M++S I
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMA-----EMVRSGIQLD 289
Query: 555 TSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVG 614
+++ +L + + + + +V +E + +V + + K +R+
Sbjct: 290 AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFE 349
Query: 615 LLYDNGYMVDMKELIIFLSQSRKLLE------ANKLLLFCLEKHHNIDIDMCNTVIEGLC 668
+ G +++ ++ + S + L A KLL E + D T+++ LC
Sbjct: 350 EMRQKGMVMN---VVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLC 406
Query: 669 KMKKLSEAFGLYYELVE 685
K + +A+G++ +++E
Sbjct: 407 KSGNVDKAYGVFNDMIE 423
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 138/305 (45%), Gaps = 18/305 (5%)
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
L EA+ K M + + P TYS + LC + F+ + L ++ G + P
Sbjct: 62 LAEAIYWDMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFI-------P 112
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELL 508
+ A+ LC+ K A + F +++RG + D SY ILI G + G E+
Sbjct: 113 DIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 509 VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP-TTSTFHSILAGLLK 567
M+R PD++ +L+ GL + LAY+ + + +KS+ V +T ++++++G K
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRL--LFSNGLRDKGFRIVGLLYDNGYMVDM 625
G ++ +L + KI L T+ V L + N + + ++ + +G +D
Sbjct: 233 AGRIEKAEALKSYM--SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDA 290
Query: 626 KELIIFLSQSRKLLEANKLLLFC---LEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYE 682
L + ++ +K F +E D+ +T+IE C+ +A+ L+ E
Sbjct: 291 YSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEE 350
Query: 683 LVEKG 687
+ +KG
Sbjct: 351 MRQKG 355
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 194/410 (47%), Gaps = 22/410 (5%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVG------VSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
LI + ++ E++++F M+ + + FN+L+ L K GR A+ +
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
M P+ T+N LI G+C+ ++ +M P++VT NT+V G+CR
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
+ A VV M + E + +VV+Y TL+ C N+++A+ +E+M++ G P+A
Sbjct: 455 HGLNMA--VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
Y LI GLC+V++ V+E L+ GGFS D N L+ C+ N + ++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVE-KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M + +PDS TY+ L+ DFE E++ ++ +R+DG P V Y ++
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ-------MREDGLDPTVTTYGAVID 624
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
C G+ +A + F+ + +P + Y ILI K G F L M +
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 518 PDSEIYQSLIDGLLQK--GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
P+ E Y +L L +K GE LL + + +M++ S P T ++ L
Sbjct: 685 PNVETYNALFKCLNEKTQGETLL--KLMDEMVEQSCEPNQITMEILMERL 732
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 191/453 (42%), Gaps = 51/453 (11%)
Query: 180 VKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSV---------------FDEMLST 224
+ L + S GVSP+ V + L K R N A + F+ +LS
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 225 YG-------------------VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD-- 263
G + PD T ILI CK+ VD+ F++M D
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 264 ----PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNI 319
D + +NTL+DG+C+ G++K A ++ M K E P+ V+Y L+ GYC +
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERCVPNAVTYNCLIDGYCRAGKL 422
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
+ A V M + +KPN VT NT++ G+C ++ + V +E G + T T
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN-MAVVFFMDMEKEGVKGNVVTYMT 481
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
L++ C+ N+ +A+ +EKM+E PD+ Y L+ LC + A ++ ++L + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKE 498
L + AY + C K + K G + D +Y LI K
Sbjct: 542 FSLD-------LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 499 GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM-LKSSIVPTTST 557
FE+ ++ M DP Y ++ID GE A + + M L S + P T
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
++ ++ K G ++ SL + +R NV
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 203/495 (41%), Gaps = 97/495 (19%)
Query: 166 LIRSYGRAGLFQESV----KLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
LIR +GR G+ +SV +L ++MK+ V VV +LL+ G + A V DEM
Sbjct: 158 LIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVD------VLLRNGLVDDAFKVLDEM 211
Query: 222 L--------------------------------------STYGVAPDTYTFNILIRGFCK 243
L S++GV+P++ I CK
Sbjct: 212 LQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 271
Query: 244 NSMVDDGFRFFQ-----------------------------------KMSSFNCDPDIVT 268
N+ + + KM PD+VT
Sbjct: 272 NARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 331
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSED----LNPDVVSYTTLLRGYCMKQNIDEALV 324
L++ +C++ +V A V + M K D + D + + TL+ G C + EA
Sbjct: 332 LGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 391
Query: 325 VFEEM-VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG 383
+ M +++ PNAVTYN LI G C K++ KEV+ E P+ T+NT++ G
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE-DEIKPNVVTVNTIVGG 450
Query: 384 HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR 443
C LN A+ F M + V+ + TY L+ C + + E+A Y+++L+
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA----- 505
Query: 444 DDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFE 502
G +P Y ++ LC+ + A R +L + G + D +Y +LI C + E
Sbjct: 506 --GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 503 AGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
YE+L M + PDS Y +LI + + + +++M + + PT +T+ +++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 563 AGLLKKGYAHESASL 577
G E+ L
Sbjct: 624 DAYCSVGELDEALKL 638
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 143/323 (44%), Gaps = 40/323 (12%)
Query: 156 VKLEDRF------FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
+KLE+R +N LI Y RAG + + ++ + MK + P+VVT N+++ + +
Sbjct: 396 MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
NMA F +M GV + T+ LI C S V+ +++KM C PD Y
Sbjct: 456 GLNMAVVFFMDM-EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVK---------------------------------KS 296
L+ G+C+ + A VV+ + + +
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK 574
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
E PD ++Y TL+ + ++ + + E+M + GL P TY +I C V ++D+
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
++ + +P+T N L+N GN +AL + E+M V+P+ TY+ L
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 417 RNLCHIGDFERAEKLYDELLKKG 439
+ L E KL DE++++
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQS 717
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 125/260 (48%), Gaps = 7/260 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA+ ++ + + G + + + Y+ ++ L + R + A + +++ G L+ +N
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA---IRVVEKLKEGGFSLDLLAYN 550
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI + ++ ++ T M+ G P +T+N+L+ K + + ++M
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFN-CDPDIVTYNTLVDGVCRAGKVK 283
G+ P T+ +I +C +D+ + F+ M + +P+ V YN L++ + G
Sbjct: 611 -GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A ++ + M K + + P+V +Y L + K + L + +EMV++ +PN +T
Sbjct: 670 QALSLKEEM--KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 344 LIKGLCEVQKIDKIKEVLEG 363
L++ L ++ K+++ ++G
Sbjct: 728 LMERLSGSDELVKLRKFMQG 747
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 147/650 (22%), Positives = 268/650 (41%), Gaps = 91/650 (14%)
Query: 105 KALKFFNWL----PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLED 160
+A+ F WL + Q + + ILGR +VA L I + L+
Sbjct: 154 RAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQE---YLLDV 210
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT-NMAKSVFD 219
R + +++ +Y R G +++++ LF MK +G SP++VT+N +L + K GR+ V D
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 220 EM----------------------------------LSTYGVAPDTYTFNILIRGFCKNS 245
EM L + G P T T+N L++ F K
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 246 MVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVS 305
+ + ++M +C D VTYN LV RAG K A V++ M KK + P+ ++
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG--VMPNAIT 388
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT-------------LIKGLCEVQ 352
YTT++ Y DEAL +F M + G PN TYN +IK LC+++
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 353 K---------------------IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
+DK + ++ GF PD T NTL++ + G+
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
+A K++ +M TY+ L+ L GD+ E + ++ KG P
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF-------KPTE 561
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSY--KILIIGHCKEGTFEAGYELLV 509
+Y M Q K G ER +K G P+ + L++ + K
Sbjct: 562 TSYSLMLQCYAKGGNYLGIER-IENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
L + + PD I+ S++ + A L+ + + + P T++S++ +++G
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 570 YAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELI 629
++ ++ L + +++ ++ ++ GL + R++ + + G +
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Query: 630 IFLS--QSRKLLEANKLLLFCLEKHHNIDIDMC-NTVIEGLCKMKKLSEA 676
F+S + + + ++ C+ K+ ++ V++G C+ K SEA
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 190/426 (44%), Gaps = 30/426 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN-MAKSVFDEM 221
+ ++I +YG+AG E++KLF SMK G P+ T+N++L +L K+ R+N M K + D
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD-- 446
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGF-RFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
+ + G +P+ T+N ++ C N +D R F++M S +PD T+NTL+ R G
Sbjct: 447 MKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
A + M + N V +Y LL K + V +M KG KP +
Sbjct: 506 SEVDASKMYGEMTRAG--FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 563
Query: 341 YNTLIKGLCEVQKIDKIK-EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
Y+ +++ C + + + E +E ++ G P L TL+ + L + + F
Sbjct: 564 YSLMLQ--CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTL 621
Query: 400 MMEWKVQPDSATY----SVLVRNLCHIGDFERAEKLYDELLKKGIL--LRDDGSTPLVAA 453
+ +PD + S+ RN +YD+ +GIL +R+DG +P +
Sbjct: 622 FKKHGYKPDMVIFNSMLSIFTRN-----------NMYDQ--AEGILESIREDGLSPDLVT 668
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLML 512
Y S+ + G+ KAE + L K + D SY +I G C+ G + +L M
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 513 RRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAH 572
R P Y + + G G ++ M K+ P TF ++ G + G
Sbjct: 729 ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYS 788
Query: 573 ESASLV 578
E+ V
Sbjct: 789 EAMDFV 794
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 143/295 (48%), Gaps = 7/295 (2%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A K + + + GF +Y +L L R + N + +K K K + ++
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG---FKPTETSYSL 566
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
+++ Y + G + ++ +K + PS + +LLL K ++ F + +
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT-LFKKH 625
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G PD FN ++ F +N+M D + + PD+VTYN+L+D R G+ A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++K + K L PD+VSY T+++G+C + + EA+ + EM ++G++P TYNT +
Sbjct: 686 EEILKTLEKS--QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
G + +I++V+E + P+ T +++G+C AG +EA+ K+
Sbjct: 744 SGYTAMGMFAEIEDVIE-CMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N++I+ + R GL QE+V++ + M G+ P + T+N+ + G + V E +
Sbjct: 704 YNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI-ECM 762
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
+ P+ TF +++ G+C+ + F K+ +F DP
Sbjct: 763 AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF--DP 802
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 209/473 (44%), Gaps = 14/473 (2%)
Query: 107 LKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
+ F W+ Q + + Y +M+ + R ++ AR F +++ S K + +++
Sbjct: 127 VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWS---CKPDAETYDA 183
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI ++GRAG ++ ++ L M ++PS T+N+L+ G A V +M
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN- 242
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
GV PD T NI++ + +F+ M PD T+N ++ + + G+ A
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ M +K + PDVV++T+++ Y +K I+ VFE MV +GLKPN V+YN L+
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
G V + + G ++ G PD + L+N + + +A +VF M + +
Sbjct: 363 -GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
+P+ TY+ L+ G A +++ + + DG P V + ++ ++
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQ-------MEQDGIKPNVVSVCTLLAACSRSK 474
Query: 466 KTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
K + RG + +Y I + E L M ++ DS +
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
LI G + + A L++M SI T + S+L K+G E+ S+
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 167/373 (44%), Gaps = 19/373 (5%)
Query: 198 FNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM 257
F L+ L +RG + +VF M +N++IR +++ VD F +M
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169
Query: 258 SSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQ 317
++C PD TY+ L++ RAG+ + A N++ M++ + + P +Y L+
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA--IAPSRSTYNNLINACGSSG 227
Query: 318 NIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK---EVLEGALEVGGFSPDT 374
N EAL V ++M D G+ P+ VT+N ++ ++ K E+++GA PDT
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA----KVRPDT 283
Query: 375 CTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ--PDSATYSVLVRNLCHIGDFERAEKLY 432
T N ++ G ++AL +F M E + + PD T++ ++ G+ E ++
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKIL 491
+ ++ +G+ P + +Y ++ +G + A + + G D SY L
Sbjct: 344 EAMVAEGL-------KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
+ + + E+ ++M + P+ Y +LID G A + ++M + I
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 552 VPTTSTFHSILAG 564
P + ++LA
Sbjct: 457 KPNVVSVCTLLAA 469
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 159/393 (40%), Gaps = 47/393 (11%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSM--KSVGVSPSVVTFNSLLLILLKRGRTNM 213
V+ + FN +I + G +++ LF SM K P VVTF S++ + +G
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
++VF+ M++ G+ P+ ++N L+ + + M + PD+V+Y L+
Sbjct: 339 CRAVFEAMVAE-GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 397
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
+ R+ + A V ++ + E P+VV+Y L+ Y + EA+ +F +M G
Sbjct: 398 NSYGRSRQPGKAKEVF--LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE-------------VGGF---------- 370
+KPN V+ TL+ +K + VL A +G +
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 371 -----------SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
D+ T L++G C EA+ ++M + + YS ++
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 420 CHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK 479
G AE ++++ ++ G P V AY SM + K KA F ++
Sbjct: 576 SKQGQVTEAESIFNQ-------MKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Query: 480 RGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLM 511
G + D + L+ K G + L+ LM
Sbjct: 629 NGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 661
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 175/444 (39%), Gaps = 61/444 (13%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+L+ +Y G+ ++ + +K G+ P VV++ LL + + AK VF M+
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMM 416
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
P+ T+N LI + N + + F++M P++V+ TL+ R+ K
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
V+ +S +N + +Y + + Y +++A+ +++ M K +K ++VT+
Sbjct: 477 VNVDTVLSA--AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 343 TLIKGLCEVQK---------------IDKIKEVLEGAL-------------------EVG 368
LI G C + K I KEV L ++
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G PD ++++ + + +A ++F +M ++PDS S L+R G
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP--- 485
L D + +K I P A C + K Q+M DP
Sbjct: 655 FVLMDLMREKEI--------PFTGAVFFEIFSACNTLQEWKRAIDLIQMM-----DPYLP 701
Query: 486 ------TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
T+ + + G K G EA +L ++ + + Y L++ LL G
Sbjct: 702 SLSIGLTNQMLHLFG--KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKY 759
Query: 540 YQTLQKMLKSSIVPTTSTFHSILA 563
+ L+ M + I P+ + I++
Sbjct: 760 IEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 175/427 (40%), Gaps = 88/427 (20%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIK---RKSNGTVKLEDRF 162
AL + Q G + SY +L GR+R A+ ++ RK N
Sbjct: 374 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT------ 427
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK--------------- 207
+N+LI +YG G E+V++F M+ G+ P+VV+ +LL +
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 487
Query: 208 -RGRTNMAKSVFDEMLSTY-------------------GVAPDTYTFNILIRGFCKNSMV 247
RG N+ + ++ + +Y V D+ TF ILI G C+ S
Sbjct: 488 SRG-INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
+ + ++M + Y++++ + G+V A ++ M K PDV++YT
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM--KMAGCEPDVIAYT 604
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI---------K 358
++L Y + +A +F EM G++P+++ + L++ + + + K
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 359 EV-LEGALEVGGFS-------------------PDTCTL-----NTLMNGHCNAGNLNEA 393
E+ GA+ FS P +L N +++ +G +
Sbjct: 665 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 724
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+K+F K++ V + TY++L+ +L +G++ + Y E+L+ + G P
Sbjct: 725 MKLFYKIIASGVGINLKTYAILLEHLLAVGNWRK----YIEVLE---WMSGAGIQPSNQM 777
Query: 454 YKSMFQF 460
Y+ + F
Sbjct: 778 YRDIISF 784
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 193/398 (48%), Gaps = 18/398 (4%)
Query: 105 KALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
+AL+ F WL + + N + +L +LGR ++A I ++ TV + +
Sbjct: 173 RALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLA----VEIFTRAEPTVGDRVQVY 228
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG--RTNMAKSVFDEM 221
N+++ Y R+G F ++ +L +M+ G P +++FN+L+ LK G N+A + D M
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD-M 287
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ G+ PD T+N L+ ++S +D + F+ M + C PD+ TYN ++ R G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
A + + K PD V+Y +LL + ++N ++ V+++M G + +TY
Sbjct: 348 AAEAERLFMELELKG--FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
NT+I + ++D ++ + + G +PD T L++ A EA + +M+
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ ++P TYS L+ G E AE + +L+ G+ P AY M L
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-------GTKPDNLAYSVMLDVL 518
Query: 462 CKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKE 498
+ +T KA +R ++ G T T Y+++I+G KE
Sbjct: 519 LRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKE 556
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 189/425 (44%), Gaps = 18/425 (4%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+ +I +YG+ L+Q++ + +++ G +P + T+NSL+ + G A+++F+ M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ G +P + NIL+ C + +++ + +++ + ++D RAG
Sbjct: 814 MRD-GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ + M K+ P + Y ++ C + + +A ++ EM + K +
Sbjct: 873 IFEVKKIYSSM--KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
N+++K ++ K +V + E G PD T NTL+ +C E + ++M
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKET-GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ P TY L+ E+AE+L++ELL KG+ L + Y +M +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR-------SFYHTMMKIS 1042
Query: 462 CKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
+G SKAE+ Q+MK +PT + +L++ + G + ++L + +
Sbjct: 1043 RDSGSDSKAEK-LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
+ Y S+ID L+ + + L +M K + P H I ++ + V+
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD----HRIWTCFVRAASFSKEKIEVM 1157
Query: 580 LLLEG 584
LLL+
Sbjct: 1158 LLLKA 1162
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 147/328 (44%), Gaps = 42/328 (12%)
Query: 113 LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGR 172
L MGF + S LML+ RA N +F +K
Sbjct: 848 LQDMGFKISKSSILLMLDAFARAGN-------IFEVK----------------------- 877
Query: 173 AGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTY 232
K+++SMK+ G P++ + ++ +L K R A+ + EM +
Sbjct: 878 --------KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEANFKVELA 928
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
+N +++ + + +Q++ +PD TYNTL+ CR + + + +++ M
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
++ L+P + +Y +L+ + ++ +++A +FEE++ KGLK + Y+T++K +
Sbjct: 989 --RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK-ISRDS 1045
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
D E L ++ G P T++ LM + ++GN EA KV + + +V+ + Y
Sbjct: 1046 GSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPY 1105
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGI 440
S ++ D+ + E+ K+G+
Sbjct: 1106 SSVIDAYLRSKDYNSGIERLLEMKKEGL 1133
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 184/450 (40%), Gaps = 51/450 (11%)
Query: 152 SNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT 211
+NG +LE+ S++ SY +G E+ +L +K + +L+++ K
Sbjct: 602 TNG-YELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK---V 657
Query: 212 NMAKSVFDEMLS---TYGVAPDTYT-FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIV 267
N + DE + +G + T + L+ N + + F + C+
Sbjct: 658 NNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASES 717
Query: 268 TYNTLVDGVCRAGKVKTAHNVV-----KG--------------------MVKKSEDL--- 299
++V C+ G +TAH VV KG + +K+E +
Sbjct: 718 VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGN 777
Query: 300 ------NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
PD+ ++ +L+ Y + A +F M+ G P + N L+ LC +
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
++++ V+E L+ GF ++ +++ AGN+ E K++ M P Y
Sbjct: 838 LEELYVVVE-ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERG 473
+++ LC AE + E+ + + +A + SM + K +
Sbjct: 897 MMIELLCKGKRVRDAEIMVSEMEEANFKVE-------LAIWNSMLKMYTAIEDYKKTVQV 949
Query: 474 FRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ 532
++++ + G + D T+Y LII +C++ E GY L+ M DP + Y+SLI +
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGK 1009
Query: 533 KGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
+ A Q +++L + S +H+++
Sbjct: 1010 QKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 120/267 (44%), Gaps = 9/267 (3%)
Query: 108 KFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLI 167
K ++ + G+ + Y +M+E+L + + + R+ + K+E +NS++
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRV---RDAEIMVSEMEEANFKVELAIWNSML 934
Query: 168 RSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGV 227
+ Y ++++V+++ +K G+ P T+N+L+++ + R + +M G+
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM-RNLGL 993
Query: 228 APDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHN 287
P T+ LI F K ++ + F+++ S D Y+T++ +G A
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 288 VVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKG 347
+++ M K+ + P + + L+ Y N EA V + D ++ + Y+++I
Sbjct: 1054 LLQMM--KNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 348 LCEVQKIDK-IKEVLEGALEVGGFSPD 373
+ + I+ +LE E G PD
Sbjct: 1112 YLRSKDYNSGIERLLEMKKE--GLEPD 1136
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 205/464 (44%), Gaps = 13/464 (2%)
Query: 115 QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAG 174
Q + + Y +M+ + R ++ AR F +++ S K + +++LI ++GRAG
Sbjct: 4 QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWS---CKPDAETYDALINAHGRAG 60
Query: 175 LFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTF 234
++ ++ L M ++PS T+N+L+ G A V +M GV PD T
Sbjct: 61 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN-GVGPDLVTH 119
Query: 235 NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVK 294
NI++ + +F+ M PD T+N ++ + + G+ A ++ M +
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
K + PDVV++T+++ Y +K I+ VFE MV +GLKPN V+YN L+ G V +
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM-GAYAVHGM 238
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
+ G ++ G PD + L+N + + +A +VF M + + +P+ TY+
Sbjct: 239 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 298
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ G A +++ + + DG P V + ++ ++ K +
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQ-------MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 475 RQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
RG + +Y I + E L M ++ DS + LI G +
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 534 GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
+ A L++M SI T + S+L K+G E+ S+
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 148/364 (40%), Gaps = 46/364 (12%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSM--KSVGVSPSVVTFNSLLLILLKRGRTNM 213
V+ + FN +I + G +++ LF SM K P VVTF S++ + +G
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
++VF+ M++ G+ P+ ++N L+ + + M + PD+V+Y L+
Sbjct: 207 CRAVFEAMVAE-GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 265
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
+ R+ + A V ++ + E P+VV+Y L+ Y + EA+ +F +M G
Sbjct: 266 NSYGRSRQPGKAKEVF--LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE-------------VGGF---------- 370
+KPN V+ TL+ +K + VL A +G +
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 371 -----------SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
D+ T L++G C EA+ ++M + + YS ++
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 420 CHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK 479
G AE ++++ ++ G P V AY SM + K KA F ++
Sbjct: 444 SKQGQVTEAESIFNQ-------MKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496
Query: 480 RGTQ 483
G +
Sbjct: 497 NGIE 500
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 149/359 (41%), Gaps = 44/359 (12%)
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
+N++IR +++ VD F +M ++C PD TY+ L++ RAG+ + A N++ M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
+ + + P +Y L+ N EAL V ++M D G+
Sbjct: 74 RAA--IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGV------------------- 112
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
PD T N +++ + + ++AL FE M KV+PD+ T++
Sbjct: 113 -----------------GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERG 473
+++ L +G +A L++ + +K R D V + S+ G+
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPD-----VVTFTSIMHLYSVKGEIENCRAV 210
Query: 474 FRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ 532
F ++ G + + SY L+ + G +L + + PD Y L++ +
Sbjct: 211 FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 270
Query: 533 KGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVT 591
+P A + M K P T+++++ G+ E+ + + + I+ NV
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 175/444 (39%), Gaps = 61/444 (13%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+L+ +Y G+ ++ + +K G+ P VV++ LL + + AK VF M+
Sbjct: 226 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMM 284
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
P+ T+N LI + N + + F++M P++V+ TL+ R+ K
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 344
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
V+ +S +N + +Y + + Y +++A+ +++ M K +K ++VT+
Sbjct: 345 VNVDTVLSA--AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 402
Query: 343 TLIKGLCEVQK---------------IDKIKEVLEGAL-------------------EVG 368
LI G C + K I KEV L ++
Sbjct: 403 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G PD ++++ + + +A ++F +M ++PDS S L+R G
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 522
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP--- 485
L D + +K I P A C + K Q+M DP
Sbjct: 523 FVLMDLMREKEI--------PFTGAVFFEIFSACNTLQEWKRAIDLIQMM-----DPYLP 569
Query: 486 ------TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
T+ + + G K G EA +L ++ + + Y L++ LL G
Sbjct: 570 SLSIGLTNQMLHLFG--KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKY 627
Query: 540 YQTLQKMLKSSIVPTTSTFHSILA 563
+ L+ M + I P+ + I++
Sbjct: 628 IEVLEWMSGAGIQPSNQMYRDIIS 651
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 175/427 (40%), Gaps = 88/427 (20%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIK---RKSNGTVKLEDRF 162
AL + Q G + SY +L GR+R A+ ++ RK N
Sbjct: 242 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT------ 295
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK--------------- 207
+N+LI +YG G E+V++F M+ G+ P+VV+ +LL +
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 355
Query: 208 -RGRTNMAKSVFDEMLSTY-------------------GVAPDTYTFNILIRGFCKNSMV 247
RG N+ + ++ + +Y V D+ TF ILI G C+ S
Sbjct: 356 SRG-INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
+ + ++M + Y++++ + G+V A ++ M K PDV++YT
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM--KMAGCEPDVIAYT 472
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI---------K 358
++L Y + +A +F EM G++P+++ + L++ + + + K
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Query: 359 EV-LEGALEVGGFS-------------------PDTCTL-----NTLMNGHCNAGNLNEA 393
E+ GA+ FS P +L N +++ +G +
Sbjct: 533 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 592
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+K+F K++ V + TY++L+ +L +G++ + Y E+L+ + G P
Sbjct: 593 MKLFYKIIASGVGINLKTYAILLEHLLAVGNWRK----YIEVLE---WMSGAGIQPSNQM 645
Query: 454 YKSMFQF 460
Y+ + F
Sbjct: 646 YRDIISF 652
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 177/357 (49%), Gaps = 41/357 (11%)
Query: 98 RLIKVPSKALKFFNWLP--QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGT 155
RL KAL+FF++L + H+ S+ L ++I R L++ I R +
Sbjct: 65 RLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAAR---LHLHPTVWSLIHRMRSLR 121
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK-------- 207
+ + F + Y AG ++VKLF +M G + +FN++L +L K
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 208 ------RGRTNMAKSVFDEMLSTY-------------------GVAPDTYTFNILIRGFC 242
RGR ++ ++ +L+ + G+ P+ T+N +++GF
Sbjct: 182 ELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 243 KNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPD 302
+ + + FF +M +C+ D+VTY T+V G AG++K A NV M++ E + P
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR--EGVLPS 299
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
V +Y +++ C K N++ A+V+FEEMV +G +PN TYN LI+GL + + +E+++
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 363 GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
+E G P+ T N ++ + + +AL +FEKM P+ TY++L+ +
Sbjct: 360 -RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 99 LIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKL 158
LIK KAL+ + + G N +Y ML+ RA + A F +K++ ++
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD---CEI 263
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
+ + +++ +G AG + + +F M GV PSV T+N+++ +L K+ A +F
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
+EM+ G P+ T+N+LIRG G Q+M + C+P+ TYN ++
Sbjct: 324 EEMVRR-GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVV 325
+V+ A + + M S D P++ +Y L+ G +++ ++ +V
Sbjct: 383 CSEVEKALGLFEKM--GSGDCLPNLDTYNILISGMFVRKRSEDMVVA 427
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 159/357 (44%), Gaps = 42/357 (11%)
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
+L +G P T + + +AG ++A+K+F M E D A+++ ++ LC
Sbjct: 119 SLRIG---PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 175
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ 483
E+A +L+ L +G D Y + C +T KA +++++RG
Sbjct: 176 RVEKAYELFRAL--RGRFSVD------TVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 484 -DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQT 542
+ T+Y ++ G + G +E + M +R+ + D Y +++ G GE A
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 543 LQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQ----NVTLSTHTVR 598
+M++ ++P+ +T+++++ L KK ++ V++ E +R+ NVT +R
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKK----DNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 599 LLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLL-LF-------CLE 650
LF G +G ++ + + G + + + + + E K L LF CL
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 651 KHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGR 707
++D N +I G+ ++K SE ++V GN E LR+ ++G R
Sbjct: 404 -----NLDTYNILISGMF-VRKRSE------DMVVAGNQA--FAKEILRLQSKSGSR 446
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 188/389 (48%), Gaps = 23/389 (5%)
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
++R C +D +KM P ++T+N L++G+C+AG ++ A +V+ M +
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
+P+ VSY TL++G C N+D+AL +F M G++PN VT N ++ LC+ I
Sbjct: 187 P--SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 357 -----IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
++E+L+ + CT+ LM+ GN+ +AL+V+++M + V DS
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTI--LMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
Y+V++R LC G+ A +++K+G+ P V Y ++ LCK GK +A
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGV-------NPDVFTYNTLISALCKEGKFDEA- 354
Query: 472 RGFRQLMKRG--TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
M+ G D SYK++I G C G E L+ ML+ + P+ ++ +IDG
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQN 589
+ G+ A L ML + P T ++++ G +K G ++ + + KI +
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 590 VTLSTHTVRLLFSNGLRDKGFRIVGLLYD 618
T T LL R+ LYD
Sbjct: 475 TT----TYNLLLGAACTLGHLRLAFQLYD 499
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 173/402 (43%), Gaps = 84/402 (20%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N L+ +AG +++ L M+ +G SP+ V++N+L+ L + A +F+ M +
Sbjct: 160 NHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM-N 218
Query: 224 TYGVAPDTYTFNILIRGFC---------------------------------------KN 244
YG+ P+ T NI++ C KN
Sbjct: 219 KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKN 278
Query: 245 SMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVV 304
V +++MS N D V YN ++ G+C +G + A+ + MVK+ +NPDV
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG--VNPDVF 336
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKE----- 359
+Y TL+ C + DEA + M + G+ P+ ++Y +I+GLC +++ E
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 360 --------------VLEGALEVG---------------GFSPDTCTLNTLMNGHCNAGNL 390
V++G G G P+ T N L++G+ G L
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+A V +M K+ PD+ TY++L+ C +G A +LYDE+L++ G P
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR-------GCQPD 509
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKIL 491
+ Y + + LC G+ KAE ++ G T D + IL
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 153/339 (45%), Gaps = 5/339 (1%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNL-NVARNFLFSIKRKSNGTVKLEDRFF 163
KAL FN + + G N + +++ L + + N + L I S L+
Sbjct: 209 KALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVIC 268
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
L+ S + G ++++++ M V V +N ++ L G A +M+
Sbjct: 269 TILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
GV PD +T+N LI CK D+ M + PD ++Y ++ G+C G V
Sbjct: 329 R-GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A+ + M+K S P+V+ + ++ GY + AL V M+ G+KPN T N
Sbjct: 388 RANEFLLSMLKSSL--LPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
LI G + ++ V + + PDT T N L+ C G+L A +++++M+
Sbjct: 446 LIHGYVKGGRLIDAWWV-KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR 504
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL 442
QPD TY+ LVR LC G ++AE L + GI +
Sbjct: 505 GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 196/430 (45%), Gaps = 12/430 (2%)
Query: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
KS D + + +++++R C++ +D AL + ++M+ G+ P +T+N L+ GLC+ I
Sbjct: 113 KSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYI 172
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
+K ++ E+G SP+ + NTL+ G C+ N+++AL +F M ++ ++P+ T ++
Sbjct: 173 EKADGLVREMREMGP-SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 415 LVRNLCHIGDF-ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC-KNGKTSKAER 472
+V LC G +KL +E+L + PL ++ C KNG +A
Sbjct: 232 IVHALCQKGVIGNNNKKLLEEILDSS-----QANAPLDIVICTILMDSCFKNGNVVQALE 286
Query: 473 GFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
++++ ++ D Y ++I G C G A Y + M++R +PD Y +LI L
Sbjct: 287 VWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALC 346
Query: 532 QKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVT 591
++G+ A M + P ++ I+ GL G + + ++ +L+ + V
Sbjct: 347 KEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVL 406
Query: 592 LSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLLFC 648
L + G ++ L+ G ++ LI + +L++A +
Sbjct: 407 LWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM 466
Query: 649 LEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRS 708
+ D N ++ C + L AF LY E++ +G + L L GR
Sbjct: 467 RSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRL 526
Query: 709 KEVEFLSKRM 718
K+ E L R+
Sbjct: 527 KKAESLLSRI 536
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 45/286 (15%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFS-IKRKSNGTVKLEDRF- 162
+AL+ + + Q + Y +++ L + N+ A F+ +KR N D F
Sbjct: 283 QALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN-----PDVFT 337
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK------- 215
+N+LI + + G F E+ L +M++ GV+P +++ ++ L G N A
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSML 397
Query: 216 ----------------------------SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV 247
SV + MLS YGV P+ YT N LI G+ K +
Sbjct: 398 KSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS-YGVKPNVYTNNALIHGYVKGGRL 456
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
D + +M S PD TYN L+ C G ++ A + M+++ PD+++YT
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG--CQPDIITYT 514
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
L+RG C K + +A + + G+ + V + L K +Q+
Sbjct: 515 ELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQR 560
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 225/522 (43%), Gaps = 50/522 (9%)
Query: 125 YFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFT 184
+ LM++ GR +++ AR + +R + R + SLI +Y E++
Sbjct: 312 FGLMVKFYGRRGDMHRARE---TFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 185 SMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM----------------------- 221
MK G+ S+VT++ ++ K G A FDE
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 222 -----------LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
+ G+ ++ ++ G+ + G F+++ P +VTY
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
L++ + GK+ A V + V K E + ++ +Y+ ++ G+ ++ A VFE+MV
Sbjct: 489 CLINLYTKVGKISKALEVSR--VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDK-IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
+G+KP+ + YN +I C + +D+ I+ V E ++ P T T +++G+ +G+
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE--MQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
+ +L+VF+ M P T++ L+ L E+A ++ DE+ G+ + T
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELL 508
++ Y S+ G T KA F +L G D +Y+ L+ CK G ++ +
Sbjct: 665 IMQGYASV-------GDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 509 VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
M RN +S +Y LIDG ++G+ A +Q+M K + P T+ S ++ K
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 569 GYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
G + + + + ++ N+ T ++ L +K
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 181/433 (41%), Gaps = 45/433 (10%)
Query: 193 PSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFR 252
PS F ++ +RG + A+ F+ M + G+ P + + LI + +D+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 253 FFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRG 312
+KM + +VTY+ +V G +AG + A + + LN + Y ++
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI--YGKIIYA 423
Query: 313 YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
+C N++ A + EM ++G+ Y+T++ G V +K V+ L+ GF+P
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD-EKKGLVVFKRLKECGFTP 482
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
T L+N + G +++AL+V M E V+ + TYS+++ + D+ A ++
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILI 492
++++K+G+ P V Y ++ C G +A + +++ K
Sbjct: 543 EDMVKEGM-------KPDVILYNNIISAFCGMGNMDRAIQTVKEMQK------------- 582
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
LR P + + +I G + G+ + + M + V
Sbjct: 583 -------------------LRHR--PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
PT TF+ ++ GL++K ++ ++ + + N T ++ S G K F
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 613 VGLLYDNGYMVDM 625
L + G VD+
Sbjct: 682 FTRLQNEGLDVDI 694
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 27/347 (7%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR-- 161
SKAL+ + + G HN ++Y +M+ N +K +N ED
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMI-------------NGFVKLKDWANAFAVFEDMVK 547
Query: 162 --------FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
+N++I ++ G +++ M+ + P+ TF ++ K G
Sbjct: 548 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRR 607
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
+ VFD M+ G P +TFN LI G + ++ +M+ + TY ++
Sbjct: 608 SLEVFD-MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
G G A + ++E L+ D+ +Y LL+ C + AL V +EM +
Sbjct: 667 QGYASVGDTGKAFEYFTRL--QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+ N+ YN LI G + + ++++ ++ G PD T + ++ AG++N A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQ-QMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
+ E+M V+P+ TY+ L++ E+A Y+E+ GI
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 41/301 (13%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
R F +I Y ++G + S+++F M+ G P+V TFN L+ L+++ + A + DE
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
M + GV+ + +T+ +++G+ F +F ++ + D DI TY L+ C++G
Sbjct: 650 M-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
Query: 281 KVKTAHNVVKGMVK---------------------------------KSEDLNPDVVSYT 307
++++A V K M K E + PD+ +YT
Sbjct: 709 RMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYT 768
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
+ + +++ A EEM G+KPN TY TLIKG +K E ++
Sbjct: 769 SFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYE-EMKA 827
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEA------LKVFEKMMEWKVQPDSATYSVLVRNLCH 421
G PD + L+ + ++ EA + + ++M+E + D T + LC
Sbjct: 828 MGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCK 887
Query: 422 I 422
I
Sbjct: 888 I 888
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 193/402 (48%), Gaps = 19/402 (4%)
Query: 172 RAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDT 231
+A ++++++ M S G+ P + L+ L KRG A + ++M +G +T
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM-EDHGYPSNT 176
Query: 232 YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKG 291
T+N L+RG C ++ +F +++ P+ TY+ L++ + A ++
Sbjct: 177 VTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDE 236
Query: 292 MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV 351
++ K + P++VSY LL G+C + D+A+ +F E+ KG K N V+YN L++ LC
Sbjct: 237 IIVKGGE--PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 294
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ--PDS 409
+ ++ +L ++ G +P T N L+N G +AL+V ++M + Q +
Sbjct: 295 GRWEEANSLL-AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 410 ATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSK 469
+Y+ ++ LC G + K DE++ + P Y ++ N K +
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRC-------KPNEGTYNAIGSLCEHNSKVQE 406
Query: 470 AERGFRQL---MKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSL 526
A + L K T D YK +I C++G A ++LL M R FDPD+ Y +L
Sbjct: 407 AFYIIQSLSNKQKCCTHD--FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSAL 464
Query: 527 IDGLLQKGEPLLAYQTLQKMLKS-SIVPTTSTFHSILAGLLK 567
I GL +G A + L M +S + PT F++++ GL K
Sbjct: 465 IRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 204/473 (43%), Gaps = 50/473 (10%)
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
E L T G P+ L+ CK + + R + M S PD Y LV+ +C+
Sbjct: 95 ESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKR 154
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
G V A +V+ M + + V+Y L+RG CM +++++L E ++ KGL PNA
Sbjct: 155 GNVGYAMQLVEKM--EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAF 212
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
TY+ L++ + + D+ ++L+ + GG P+ + N L+ G C G ++A+ +F +
Sbjct: 213 TYSFLLEAAYKERGTDEAVKLLDEIIVKGG-EPNLVSYNVLLTGFCKEGRTDDAMALFRE 271
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS-TPLVAAYKSMF 458
+ + + +Y++L+R LC G +E A L E+ D G P V Y +
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM--------DGGDRAPSVVTYNILI 323
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQ---DPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
L +G+T +A + +++ K Q TSY +I CKEG + + L M+ R
Sbjct: 324 NSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR 383
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESA 575
P+ Y ++ + A+ +Q + T + S++ L +KG +
Sbjct: 384 CKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAF 443
Query: 576 SLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQS 635
L+ + R HT L I GL + + M+ L I
Sbjct: 444 QLLYEM----TRCGFDPDAHTYSAL-----------IRGLCLEGMFTGAMEVLSI----- 483
Query: 636 RKLLEANKLLLFCLEKHHNID--IDMCNTVIEGLCKMKKLSEAFGLYYELVEK 686
+E+ N +D N +I GLCK+++ A ++ +VEK
Sbjct: 484 -------------MEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 181/407 (44%), Gaps = 18/407 (4%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A++ + G+ N +Y ++ L +LN + F+ + +K F
Sbjct: 160 AMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFL-- 217
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
L +Y G E+VKL + G P++V++N LL K GRT+ A ++F E L
Sbjct: 218 LEAAYKERGT-DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE-LPAK 275
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G + ++NIL+R C + ++ +M + P +VTYN L++ + G+ + A
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
V+K M K + SY ++ C + +D + +EM+ + KPN TYN I
Sbjct: 336 LQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-I 394
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN---TLMNGHCNAGNLNEALKVFEKMME 402
LCE K++E ++ CT + +++ C GN A ++ +M
Sbjct: 395 GSLCEHNS--KVQEAFY-IIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
PD+ TYS L+R LC G F A ++ I+ + P V + +M LC
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVL------SIMEESENCKPTVDNFNAMILGLC 505
Query: 463 KNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEAGYELL 508
K +T A F ++ K+ + T+Y IL+ G E E E+L
Sbjct: 506 KIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 171/390 (43%), Gaps = 43/390 (11%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P+V T LL C + +A+ V E MV G+ P+A Y L+ LC+ + ++
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
+E +E G+ +T T N L+ G C G+LN++L+ E++M+ + P++ TYS L+
Sbjct: 164 VE-KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
+ A KL DE++ KG P + +Y + CK G+T A FR+L +
Sbjct: 223 KERGTDEAVKLLDEIIVKG-------GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK 275
Query: 481 GTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
G + + SY IL+ C +G +E LL M + P Y LI+ L G A
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 540 YQTLQKMLKSS--IVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTV 597
Q L++M K + T ++++ ++A L K+G LVV L+ I + + T
Sbjct: 336 LQVLKEMSKGNHQFRVTATSYNPVIARLCKEG----KVDLVVKCLDEMIYRRCKPNEGT- 390
Query: 598 RLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
+ +G L + + K+ EA ++ K
Sbjct: 391 ------------YNAIGSLCE---------------HNSKVQEAFYIIQSLSNKQKCCTH 423
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
D +VI LC+ AF L YE+ G
Sbjct: 424 DFYKSVITSLCRKGNTFAAFQLLYEMTRCG 453
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 200/447 (44%), Gaps = 20/447 (4%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA++ + G + +Y ++ L + N+ A +++ + +N
Sbjct: 124 KAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL---VEKMEDHGYPSNTVTYN 180
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+L+R G +S++ + G++P+ T++ LL K T+ A + DE++
Sbjct: 181 ALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII-V 239
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P+ ++N+L+ GFCK DD F+++ + ++V+YN L+ +C G+ +
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 299
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG---LKPNAVTY 341
A++++ M D P VV+Y L+ ++AL V +EM KG + A +Y
Sbjct: 300 ANSLLAEM--DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSY 356
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
N +I LC+ K+D + + L+ + P+ T N + + + + EA + + +
Sbjct: 357 NPVIARLCKEGKVDLVVKCLDEMI-YRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ Y ++ +LC G+ A +L E+ + G P Y ++ + L
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF-------DPDAHTYSALIRGL 468
Query: 462 CKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
C G + A + + PT ++ +I+G CK + E+ +M+ + P+
Sbjct: 469 CLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPN 528
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKM 546
Y L++G+ + E LA + L ++
Sbjct: 529 ETTYAILVEGIAHEDELELAKEVLDEL 555
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 15/313 (4%)
Query: 257 MSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMK 316
M C PD+VT+ TL++G+C G+V A +V MV++ Y T++ G C
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ------PYGTIINGLCKM 54
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCT 376
+ + AL + +M + +K + V YN +I LC+ + + + G F PD T
Sbjct: 55 GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIF-PDVIT 113
Query: 377 LNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELL 436
+ +++ C +G +A ++ M+E ++ PD T+S L+ L G AE++Y ++L
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 437 KKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGH 495
++GI P Y SM CK + + A+R + K + D ++ LI G+
Sbjct: 174 RRGIF-------PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 496 CKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTT 555
CK + G E+ M RR ++ Y +LI G Q G+ A L M+ S + P
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 556 STFHSILAGLLKK 568
TF S+LA L K
Sbjct: 287 ITFQSMLASLCSK 299
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 156/308 (50%), Gaps = 15/308 (4%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F +L+ G +++ L M G P + +++ L K G T A ++ +M
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKME 68
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
T+ + +N +I CK+ F +M PD++TY+ ++D CR+G+
Sbjct: 69 ETH-IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +++ M+++ +NPDVV+++ L+ + + EA ++ +M+ +G+ P +TYN
Sbjct: 128 TDAEQLLRDMIERQ--INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYN 185
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
++I G C+ +++ K +L+ ++ SPD T +TL+NG+C A ++ +++F +M
Sbjct: 186 SMIDGFCKQDRLNDAKRMLD-SMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ ++ TY+ L+ C +GD + A+ L + ++ G+ P ++SM LC
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV-------APNYITFQSMLASLC 297
Query: 463 KNGKTSKA 470
+ KA
Sbjct: 298 SKKELRKA 305
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 7/278 (2%)
Query: 123 QSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKL 182
Q Y ++ L + + A N L ++ +K +N++I + G + L
Sbjct: 42 QPYGTIINGLCKMGDTESALNLLSKMEETH---IKAHVVIYNAIIDRLCKDGHHIHAQNL 98
Query: 183 FTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFC 242
FT M G+ P V+T++ ++ + GR A+ + +M+ + PD TF+ LI
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ-INPDVVTFSALINALV 157
Query: 243 KNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPD 302
K V + + M P +TYN+++DG C+ ++ A ++ M KS +PD
Sbjct: 158 KEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS--CSPD 215
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
VV+++TL+ GYC + +D + +F EM +G+ N VTY TLI G C+V +D +++L
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275
Query: 363 GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+ G +P+ T +++ C+ L +A + E +
Sbjct: 276 VMIS-SGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 15/326 (4%)
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G PD T TLMNG C G + +AL + ++M+E QP Y ++ LC +GD E A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTS 487
L ++ + I V Y ++ LCK+G A+ F ++ +G D +
Sbjct: 61 LNLLSKMEETHIKAH-------VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
Y +I C+ G + +LL M+ R +PD + +LI+ L+++G+ A + ML
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 548 KSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRD 607
+ I PTT T++S++ G K+ +++ ++ + +V + + D
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 608 KGFRIVGLLYDNGYM---VDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVI 664
G I ++ G + V LI Q L A LL + + +++
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 665 EGLCKMKKLSEAFGLYYELVEKGNHQ 690
LC K+L +AF + +L + H
Sbjct: 294 ASLCSKKELRKAFAILEDLQKSEGHH 319
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 176/388 (45%), Gaps = 46/388 (11%)
Query: 104 SKALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
++A FF W Q G+ H+ +Y M+++LG+ RN ++ + + + + D
Sbjct: 147 NQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTM 206
Query: 163 FNSLIRSYGRAGLFQESVKLFTSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+ ++R ++G + ++V F M KS GV + NSL+ L+K A VF ++
Sbjct: 207 -SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL 265
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
T + PD TFNILI GFCK DD M PD+VTY + V+ C+ G
Sbjct: 266 FDT--IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ + +++ M + NP+VV+YT ++ + + EAL V+E+M + G P+A Y
Sbjct: 324 FRRVNEMLEEM--RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
++LI L + + E+ E + G D NT+++ + AL++ ++M
Sbjct: 382 SSLIHILSKTGRFKDAAEIFED-MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Query: 402 EWK--------------------------------------VQPDSATYSVLVRNLCHIG 423
+ + V D +TY +L+R LC G
Sbjct: 441 DEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSG 500
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLV 451
E A ++E ++KG++ RD LV
Sbjct: 501 KVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ ++ S G++ E++ ++ MK G P ++SL+ IL K GR A +F++M
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM- 404
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSF---NCDPDIVTYNTLVDGVCRA 279
+ GV D +N +I +S + R ++M +C P++ TY L+ C
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHK 464
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
K+K ++ MVK D++ DV +Y L+RG CM ++EA + FEE V KG+ P
Sbjct: 465 KKMKLLGILLHHMVKN--DVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDS 522
Query: 340 TYNTLI-----KGLCEVQKIDKIKEVLEGALEVGGFSP 372
T L+ K + E + KI+ +++ + SP
Sbjct: 523 TCKMLVDELEKKNMAEAKL--KIQSLVQSKTMIDSHSP 558
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 148/387 (38%), Gaps = 58/387 (14%)
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG--- 368
G C +N D + EM +K + VT +T+ K + + K K + ++ LE+
Sbjct: 177 GKC--RNFDLMWELVNEM-NKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSY 233
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G DT +N+LM+ ++ A +VF K+ + ++PD+ T+++L+ C F+ A
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDA 292
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK--RGTQDPT 486
R LMK T D
Sbjct: 293 -------------------------------------------RAMMDLMKVTEFTPDVV 309
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
+Y + +CKEG F E+L M +P+ Y ++ L + + A +KM
Sbjct: 310 TYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369
Query: 547 LKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLR 606
+ VP + S++ L K G ++A + + +R++V + + +
Sbjct: 370 KEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD 429
Query: 607 DKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHH------NIDIDMC 660
+ R++ + D + + + K+ L + HH +ID+
Sbjct: 430 EMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTY 489
Query: 661 NTVIEGLCKMKKLSEAFGLYYELVEKG 687
+I GLC K+ EA + E V KG
Sbjct: 490 ILLIRGLCMSGKVEEACLFFEEAVRKG 516
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 216/482 (44%), Gaps = 27/482 (5%)
Query: 95 QVLRLIKVPSKALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN 153
+VL+L + A KFF+W Q G+ H+ +Y L R + A + S
Sbjct: 130 EVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMD--SQ 187
Query: 154 GTVKLEDRFFNSLIRSYG--RAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT 211
G E +F LIR + R GL ++ MK G P V +N ++ L+K G
Sbjct: 188 GRPPSEKQF-EILIRMHADNRRGL--RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYF 244
Query: 212 NMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNT 271
++A +V+++ G+ ++ TF IL++G CK +++ Q+M C PD+ Y
Sbjct: 245 DLALAVYEDFKED-GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
++ + G + + V M + +++ PDV++Y TL+ G C ++ +F EM
Sbjct: 304 MIKTLVSEGNLDASLRVWDEM--RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKG 361
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
K + + Y LI+G K+ + E ++ G+ D N ++ G C+ ++
Sbjct: 362 KQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD-SGYIADIGIYNAVIKGLCSVNQVD 420
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRN---LCHIGDFERAEKLYDELLKKGILLRDDGST 448
+A K+F+ +E +++PD T S ++ + + DF + EL
Sbjct: 421 KAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL-----------GY 469
Query: 449 PLVAAYKSMFQFLCKNG-KTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYEL 507
P+ F+ LC + K + A F L +G + Y IL+ K G + L
Sbjct: 470 PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSL 529
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M + F+PDS Y I ++KG+ A +K+++ S VP+ + + S+ GL +
Sbjct: 530 FYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQ 589
Query: 568 KG 569
G
Sbjct: 590 IG 591
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 27/397 (6%)
Query: 302 DVVSYTTLLRGYCMKQN--IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKE 359
D +Y YC+ +N A + E M +G P+ + LI+ + ++ ++
Sbjct: 157 DFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYY 214
Query: 360 VLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
V E ++ GF P N +M+ G + AL V+E E + +S T+ +LV+ L
Sbjct: 215 VYE-KMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGL 273
Query: 420 CHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK 479
C G E E+L+ +R++ P V AY +M + L G + R + ++ +
Sbjct: 274 CKAGRIE-------EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR 326
Query: 480 RGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLL 538
+ D +Y L++G CK+G E GYEL + M + D EIY+ LI+G + G+
Sbjct: 327 DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRS 386
Query: 539 AYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV-TLSTHTV 597
A + ++ S + +++++ GL ++ L + +E ++ + TLS V
Sbjct: 387 ACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMV 446
Query: 598 RLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLL----EANKLLL---FCLE 650
+ N L D ++ + + GY V +L+Q KLL E N + L + L+
Sbjct: 447 AYVVMNRLSDFS-NVLERIGELGYPVS-----DYLTQFFKLLCADEEKNAMALDVFYILK 500
Query: 651 KHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ + + N ++E L KM + ++ L+YE+ + G
Sbjct: 501 TKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLG 537
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 176/448 (39%), Gaps = 81/448 (18%)
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
K +G V+ E F L++ +AG +E +++ M+ P V + +++ L+ G
Sbjct: 255 KEDGLVE-ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGN 313
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
+ + V+DEM + PD + L+ G CK+ V+ G+ F +M D Y
Sbjct: 314 LDASLRVWDEMRRD-EIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYR 372
Query: 271 TLVDGVCRAGKVKTAHN-------------------VVKGM--------------VKKSE 297
L++G GKV++A N V+KG+ V E
Sbjct: 373 VLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Query: 298 DLNPD-------VVSYTTLLR--------------GYCMKQNIDE--------------A 322
+L PD +V+Y + R GY + + + A
Sbjct: 433 ELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMA 492
Query: 323 LVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMN 382
L VF + KG +V YN L++ L ++ I K + ++G F PD+ + + +
Sbjct: 493 LDVFYILKTKGHGSVSV-YNILMEALYKMGDIQKSLSLFYEMRKLG-FEPDSSSYSIAIC 550
Query: 383 GHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL 442
G++ A EK++E P A Y L + LC IG+ + L E L
Sbjct: 551 CFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLG----- 605
Query: 443 RDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT-QDPTSYKILIIGHCKEGTF 501
+ S P+ Y +CK K + ++ + G + Y +I G K GT
Sbjct: 606 -NVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTI 664
Query: 502 EAGYELLVLMLRRNF--DPDSEIYQSLI 527
+ E+ + +R + D +Y+ ++
Sbjct: 665 KVAREVFTELKKRKVMTEADMVVYEEML 692
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 48/338 (14%)
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G+ D N G+ A ++ E M P + +L+R H D R
Sbjct: 153 GYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIR--MH-ADNRRG 209
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTS 487
++Y K ++ G P V Y + L KNG A + + G ++ T+
Sbjct: 210 LRVYYVYEK----MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTT 265
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
+ IL+ G CK G E E+L M PD Y ++I L+ +G + + +M
Sbjct: 266 FMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMR 325
Query: 548 KSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRD 607
+ I P + +++ GL K G L +E K +Q + + R+L + D
Sbjct: 326 RDEIKPDVMAYGTLVVGLCKDGRVERGYEL---FMEMKGKQ-ILIDREIYRVLIEGFVAD 381
Query: 608 KGFRIVGLLY----DNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTV 663
R L+ D+GY+ D I + N V
Sbjct: 382 GKVRSACNLWEDLVDSGYIAD--------------------------------IGIYNAV 409
Query: 664 IEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVA 701
I+GLC + ++ +A+ L+ +E+ L + VA
Sbjct: 410 IKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVA 447
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 213/464 (45%), Gaps = 13/464 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KAL + Q G+ + +Y L+++ L R+ ++ L K ++L+ + N
Sbjct: 215 KALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVM-LLRLYKEIERDKLELDVQLVN 273
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+I + ++G ++++L ++ G+S T S++ L GRT A+++F+E+ +
Sbjct: 274 DIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS 333
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G+ P T +N L++G+ K + D +M PD TY+ L+D AG+ ++
Sbjct: 334 -GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A V+K M ++ D+ P+ ++ LL G+ + + V +EM G+KP+ YN +
Sbjct: 393 ARIVLKEM--EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I + +D + L G PD T NTL++ HC G A ++FE M
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLS-EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
P + TY++++ + GD ER + + LL K ++ G P V + ++ K+
Sbjct: 510 CLPCATTYNIMINS---YGDQERWDDM-KRLLGK---MKSQGILPNVVTHTTLVDVYGKS 562
Query: 465 GKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
G+ + A ++ G + T Y LI + + G E +M P
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
SLI+ + A+ LQ M ++ + P T+ +++ L++
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 17/350 (4%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
G + ++ +Y L+++ A AR L K G V+ F+ L+ + G +
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVL---KEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
Q++ ++ MKS+GV P +N ++ K + A + FD MLS G+ PD T+N
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE-GIEPDRVTWNT 484
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
LI CK+ F+ M C P TYN +++ + ++ M KS
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM--KS 542
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI-----KGLCEV 351
+ + P+VV++TTL+ Y ++A+ EEM GLKP++ YN LI +GL E
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSE- 601
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
Q ++ + + G P LN+L+N EA V + M E V+PD T
Sbjct: 602 QAVNAFR-----VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVT 656
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
Y+ L++ L + F++ +Y+E++ G + L +A + M Q L
Sbjct: 657 YTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTL 706
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 199/509 (39%), Gaps = 47/509 (9%)
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK----------- 281
T+N LI +N+ ++ KM D V Y+ ++ + R+ K
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 282 ----------VKTAHNVVKGMVK--------------KSEDLNPDVVSYTTLLRGYCMKQ 317
V+ ++++ G K ++ L+ + +++
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 318 NIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTL 377
EA +FEE+ G+KP YN L+KG + + K E + +E G SPD T
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPL-KDAESMVSEMEKRGVSPDEHTY 377
Query: 378 NTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLK 437
+ L++ + NAG A V ++M VQP+S +S L+ G++++ ++ E+
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 438 KGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHC 496
G+ P Y + K A F +++ G + D ++ LI HC
Sbjct: 438 IGV-------KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 497 KEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTS 556
K G E+ M RR P + Y +I+ + + L KM I+P
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 557 TFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLL 616
T +++ K G +++ + + ++ + T+ + GL ++ ++
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 617 YDNGY---MVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKL 673
+G ++ + LI + R+ EA +L + E D+ T+++ L ++ K
Sbjct: 611 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 670
Query: 674 SEAFGLYYELVEKGNHQPLSCLENLRVAL 702
+ +Y E++ G LR AL
Sbjct: 671 QKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 152/340 (44%), Gaps = 20/340 (5%)
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
++ILI ++ + + F QK + P +TYN L+ R ++ A N++ M
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQT---LTP--LTYNALIGACARNNDIEKALNLIAKM- 223
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVV--FEEMVDKGLKPNAVTYNTLIKGLCEV 351
+ + D V+Y+ +++ ID +++ ++E+ L+ + N +I G +
Sbjct: 224 -RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
K ++L G + G S T TL ++++ ++G EA +FE++ + ++P +
Sbjct: 283 GDPSKALQLL-GMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
Y+ L++ G + AE + E+ K+G+ + + L+ AY N ++
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY--------VNAGRWESA 393
Query: 472 RGFRQLMKRGTQDPTSYKI--LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
R + M+ G P S+ L+ G G ++ +++L M PD + Y +ID
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
+ A T +ML I P T+++++ K G
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 213/520 (40%), Gaps = 77/520 (14%)
Query: 145 LFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLI 204
LF R++N + L+ +N + G+ G +E+++LF M G++P V+ + +L+
Sbjct: 383 LFKEFRETN--ISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGG 440
Query: 205 LLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
+G+ + A + EM T G PD +N+L G N + + F + M + P
Sbjct: 441 CCLQGKCSDAFDLMIEMDGT-GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVS------------------- 305
VT+N +++G+ AG++ A + + KS + + +V
Sbjct: 500 TYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLE 559
Query: 306 -------YTTLLRGYCMKQN-IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI 357
Y TL C +++ I +A + + M G++P Y LI C V + K
Sbjct: 560 FPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKA 619
Query: 358 KEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVL-- 415
+E E L PD T ++N +C +A +FE M V+PD TYSVL
Sbjct: 620 REFFE-ILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Query: 416 --------------------------VRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
+ CH+ D ++ L+ ++ ++ I+ P
Sbjct: 679 SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIV-------P 731
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYEL 507
V Y + + +K ER + MK P Y +LI CK G +
Sbjct: 732 DVVTYTVLLK--------NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRI 783
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M+ DPD+ Y +LI + G A +M++S + P + +++AG +
Sbjct: 784 FDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCR 843
Query: 568 KGYAHESASLVVLLLEGKIRQN-VTLSTHTVRLLFSNGLR 606
G+ ++ LV +LE I+ +LS L + GLR
Sbjct: 844 NGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAKGLR 883
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 183/425 (43%), Gaps = 31/425 (7%)
Query: 203 LILLKRGRTNMAKS-----VFDEMLSTY-------GVAPDTYTFNILIRGFCKNSMVDDG 250
L+LL R T + K+ +FDE + + G APD N LI + D
Sbjct: 142 LVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMV 201
Query: 251 FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLL 310
FF ++ D D TY +V + R + ++ ++ SE NP V Y +
Sbjct: 202 VGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLI-SETRNP-CVFYLNFI 259
Query: 311 RGYCMKQNIDEALVVFEEMVDKGLKPN----AVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
G C+ Q D A + + + D + + + Y +++GLC +I+ + V+ +E
Sbjct: 260 EGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLD-ME 318
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
G PD + ++ GH N+ +A+ VF KM++ + + + S +++ C +G+F
Sbjct: 319 KHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFS 378
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDP 485
A L+ E + I L Y F L K GK +A FR++ +G D
Sbjct: 379 EAYDLFKEFRETNISLDR-------VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDV 431
Query: 486 TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
+Y LI G C +G ++L++ M PD IY L GL G A++TL+
Sbjct: 432 INYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM 491
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGL 605
M + PT T + ++ GL+ G + A LE K R+N V+ + G
Sbjct: 492 MENRGVKPTYVTHNMVIEGLIDAG-ELDKAEAFYESLEHKSREN---DASMVKGFCAAGC 547
Query: 606 RDKGF 610
D F
Sbjct: 548 LDHAF 552
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 226/534 (42%), Gaps = 45/534 (8%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++++I + + ++V +F M + V +S+L + G + A +F E
Sbjct: 329 YSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFR 388
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
T ++ D +N+ K V++ F++M+ PD++ Y TL+ G C GK
Sbjct: 389 ET-NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A +++ M + PD+V Y L G EA + M ++G+KP VT+N
Sbjct: 448 SDAFDLMIEMDGTGK--TPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHN 505
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+I+GL + ++DK + E +LE D +++ G C AG L+ A FE+ +
Sbjct: 506 MVIEGLIDAGELDKAEAFYE-SLEHKSRENDA----SMVKGFCAAGCLDHA---FERFIR 557
Query: 403 WKVQPDSATYSVLVRNLCHIGDF-ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+ + Y L +LC D+ +A+ L D + K G+ P + Y +
Sbjct: 558 LEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGV-------EPEKSMYGKLIGAW 610
Query: 462 CKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
C+ KA F L+ K+ D +Y I+I +C+ + Y L M RR+ PD
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV 670
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAH-ESASLVV 579
Y L++ +P L + ++M ++P +++I+ Y H V
Sbjct: 671 VTYSVLLNS-----DPELDMK--REMEAFDVIPDV-VYYTIMIN----RYCHLNDLKKVY 718
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSN------GLRDKGFRIVGLLYDNGYMVDMKELIIFLS 633
L + R+ + T +L N K F + ++ ++D + I L
Sbjct: 719 ALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 634 QSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+++++ + +E + D +I CKM L EA ++ ++E G
Sbjct: 779 EAKRIFDQ------MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 175/383 (45%), Gaps = 21/383 (5%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLF-TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
R +L+++Y +F E++ +F + S+G +P + N L+ ++ GR++M F
Sbjct: 147 RVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFW 206
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
E + G+ D +T+ ++++ +N ++ + ++ V Y ++G+C
Sbjct: 207 E-IERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLN 265
Query: 280 GKVKTAHNVVKG------MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
A+ +++ +V KS DL ++Y ++RG C + I++A V +M G
Sbjct: 266 QMTDIAYFLLQPLRDANILVDKS-DLG---IAYRKVVRGLCYEMRIEDAESVVLDMEKHG 321
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+ P+ Y+ +I+G + I K +V L+ + +++++ +C GN +EA
Sbjct: 322 IDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK-RINCVIVSSILQCYCQMGNFSEA 380
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+F++ E + D Y+V L +G E A +L+ E+ KGI P V
Sbjct: 381 YDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI-------APDVIN 433
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLML 512
Y ++ C GK S A ++ G T D Y +L G G + +E L +M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 513 RRNFDPDSEIYQSLIDGLLQKGE 535
R P + +I+GL+ GE
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGE 516
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 176/358 (49%), Gaps = 18/358 (5%)
Query: 125 YFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFT 184
Y +L++LG+ R +F K +G V ++ + L+ Y A E+V +F
Sbjct: 146 YNEILDVLGKMRRFEEFHQ-VFDEMSKRDGFVN--EKTYEVLLNRYAAAHKVDEAVGVFE 202
Query: 185 SMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKN 244
K G+ +V F+ LL+ L + A+++F +G D N+++ G+C
Sbjct: 203 RRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVL 260
Query: 245 SMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVV 304
V + RF++ + + C PD+V+Y T+++ + + GK+ A + + M NPDV
Sbjct: 261 GNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRR--NPDVK 318
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEG- 363
++ C K+ I EAL VF E+ +KG PN VTYN+L+K LC++++ +K+ E++E
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
L+ G SP+ T + L+ + +++ V E+M + K + S Y+++ R
Sbjct: 379 ELKGGSCSPNDVTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWD 435
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG 481
E+ +++ E+ + G+ P Y L GK +A F+++M +G
Sbjct: 436 KEEKVREIWSEMERSGL-------GPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 171/373 (45%), Gaps = 17/373 (4%)
Query: 187 KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSM 246
+SV +S S++ +N +L +L K R VFDEM G + T+ +L+ +
Sbjct: 136 QSVHLSSSML-YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEK-TYEVLLNRYAAAHK 193
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
VD+ F++ F D D+V ++ L+ +CR V+ A + + + D+ +
Sbjct: 194 VDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETL---FCSRRREFGCDIKAM 250
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
+L G+C+ N+ EA +++++ +P+ V+Y T+I L + K+ K E+ +
Sbjct: 251 NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWD 310
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
+PD N +++ C + EAL+VF ++ E P+ TY+ L+++LC I E
Sbjct: 311 TRR-NPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE 369
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT 486
+ +L +E+ KG GS + F +L K + SK + M + + T
Sbjct: 370 KVWELVEEMELKG------GS---CSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMT 420
Query: 487 S--YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
S Y ++ + + E E+ M R PD Y I GL KG+ A Q
Sbjct: 421 SDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Query: 545 KMLKSSIVPTTST 557
+M+ +VP T
Sbjct: 481 EMMSKGMVPEPRT 493
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 178 ESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM-LSTYGVAPDTYTFNI 236
E++++F + G P+VVT+NSLL L K RT + +EM L +P+ TF+
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSY 394
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
L++ ++ VD ++M+ C+ YN + + K + + M +
Sbjct: 395 LLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSG 451
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
L PD +YT + G K I EAL F+EM+ KG+ P T
Sbjct: 452 --LGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
+++ YN ++ L ++++ ++ +V + + GF + T L+N + A ++EA+ V
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEK-TYEVLLNRYAAAHKVDEAVGV 200
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
FE+ E+ + D + L+ LC E AE L+ R+ G + A
Sbjct: 201 FERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF------CSRRREFGCD--IKAMNM 252
Query: 457 MFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
+ C G +A+R ++ ++ + D SY +I K+G EL M
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
+PD +I ++ID L K A + +++ + P T++S+L L K
Sbjct: 313 RNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 184/383 (48%), Gaps = 17/383 (4%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NSLI + + ++LF M G+SP + ++N+L+ K GR A + E +
Sbjct: 86 YNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDI 145
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ P T+NIL+ CK+ D+ F+ + S P+++TYN L++G+C++ +V
Sbjct: 146 HLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRV 204
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ +++ + K P+ V+YTT+L+ Y + I++ L +F +M +G +
Sbjct: 205 GSVDWMMREL--KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANC 262
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
++ L + + ++ E + + G S D + NTL+N + GNL+ + E++
Sbjct: 263 AVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEM 322
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
++PD T++++V L +IG+ AEK + + G P V + LC
Sbjct: 323 KGLKPDDYTHTIIVNGLLNIGNTGGAEKHL-------ACIGEMGMQPSVVTCNCLIDGLC 375
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
K G +A R F + R D +Y ++ CK+G +LL+ + S
Sbjct: 376 KAGHVDRAMRLFASMEVR---DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSA 432
Query: 523 YQSLIDGLLQKGEPLLAYQTLQK 545
++++ G+ + ++YQ +K
Sbjct: 433 RRAVLSGIRET----VSYQAARK 451
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 61/391 (15%)
Query: 231 TYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD-------PDIVTYNTLVDGVCRAGKVK 283
T NI + CK FR ++ + D PD++TYNTL+ G R +
Sbjct: 13 TKLLNISVNSLCK-------FRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGID 65
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A+ V + M + + PDV +Y +L+ G ++ L +F+EM+ GL P+ +YNT
Sbjct: 66 EAYAVTRRM--REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L+ ++ + + ++L + + G P T N L++ C +G+ + A+++F K ++
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF-KHLKS 182
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF--- 460
+V+P+ TY++L+ LC R D ++++ L+ G TP Y +M +
Sbjct: 183 RVKPELMTYNILINGLCK----SRRVGSVDWMMRE---LKKSGYTPNAVTYTTMLKMYFK 235
Query: 461 --------------------------------LCKNGKTSKAERGFRQLMKRGT--QDPT 486
L K G+ +A +L++ GT QD
Sbjct: 236 TKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIV 295
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
SY L+ + K+G +A +LL + + PD + +++GLL G A + L +
Sbjct: 296 SYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACI 355
Query: 547 LKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
+ + P+ T + ++ GL K G+ + L
Sbjct: 356 GEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 172/400 (43%), Gaps = 42/400 (10%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
PDV++Y TL++GY IDEA V M + G++P+ TYN+LI G + ++++ ++
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF-EKMMEWKVQPDSATYSVLVRNL 419
+ L G SPD + NTLM+ + G EA K+ E + + P TY++L+ L
Sbjct: 106 FDEMLH-SGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDAL 164
Query: 420 CHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK 479
C G + A +L+ L + P + Y + LCK+ + + R+L K
Sbjct: 165 CKSGHTDNAIELFKHLKSR--------VKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 480 RG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLL 538
G T + +Y ++ + K E G +L + M + + D +++ L++ G
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEE 276
Query: 539 AYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVR 598
AY+ + ++++S ++ L L K ++ ++ +E K + THT+
Sbjct: 277 AYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDY-THTI- 334
Query: 599 LLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDID 658
NGL + G + G A K L E +
Sbjct: 335 --IVNGLLNIG--------NTG-------------------GAEKHLACIGEMGMQPSVV 365
Query: 659 MCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENL 698
CN +I+GLCK + A L+ + + S + NL
Sbjct: 366 TCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNL 405
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 161/325 (49%), Gaps = 12/325 (3%)
Query: 95 QVLRLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN 153
QVL+ + + AL FF WL Q GF H+ +Y M+ LGRA+ L + R
Sbjct: 331 QVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDG- 389
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
K +N LI SYGRA +E++ +F M+ G P VT+ +L+ I K G ++
Sbjct: 390 --CKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A ++ M G++PDT+T++++I K + R F +M C P++VT+N ++
Sbjct: 448 AMDMYQRMQEA-GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR--GYCMKQNIDEALVVFEEMVD 331
+A +TA + + M ++ PD V+Y+ ++ G+C ++EA VF EM
Sbjct: 507 ALHAKARNYETALKLYRDM--QNAGFQPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQR 562
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
K P+ Y L+ + +DK + + L+ G P+ T N+L++ ++
Sbjct: 563 KNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQA-GLRPNVPTCNSLLSTFLRVHRMS 621
Query: 392 EALKVFEKMMEWKVQPDSATYSVLV 416
EA + + M+ + P TY++L+
Sbjct: 622 EAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 18/324 (5%)
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
+K+ D +YTT++ + E + +EMV G KPN VTYN LI
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+ + V ++ G PD T TL++ H AG L+ A+ ++++M E + PD+ TY
Sbjct: 409 YLKEAMNVFN-QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTY 467
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
SV++ L G A +L+ E++ +G TP + + M K A +
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGC-------TPNLVTFNIMIALHAKARNYETALK 520
Query: 473 GFRQLMKRGTQ-DPTSYKIL--IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
+R + G Q D +Y I+ ++GHC G E + M R+N+ PD +Y L+D
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 578
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQN 589
+ G A+Q Q ML++ + P T +S+L+ L+ E+ +L+ +L + +
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML--ALGLH 636
Query: 590 VTLSTHTVRLLFSNGLR---DKGF 610
+L T+T+ L R D GF
Sbjct: 637 PSLQTYTLLLSCCTDARSNFDMGF 660
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 17/293 (5%)
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV 276
+ DEM+ G P+T T+N LI + + + + + F +M C+PD VTY TL+D
Sbjct: 381 LLDEMVRD-GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
+AG + A ++ + M + L+PD +Y+ ++ ++ A +F EMV +G P
Sbjct: 440 AKAGFLDIAMDMYQRM--QEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTP 497
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMN--GHCNAGNLNEAL 394
N VT+N +I + + + ++ ++ GF PD T + +M GHC G L EA
Sbjct: 498 NLVTFNIMIALHAKARNYETALKLYRD-MQNAGFQPDKVTYSIVMEVLGHC--GFLEEAE 554
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAY 454
VF +M PD Y +LV G+ ++A + Y +L+ G+ P V
Sbjct: 555 GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL-------RPNVPTC 607
Query: 455 KSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEG--TFEAGY 505
S+ + + S+A + ++ G L++ C + F+ G+
Sbjct: 608 NSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGF 660
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 218/465 (46%), Gaps = 38/465 (8%)
Query: 94 FQVLRLIKV-PSKALKFFNWLPQM--GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 150
Q+LR + PSK L FF W + G+ H+ +Y + + R L + L S+K
Sbjct: 61 LQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE 120
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVG--VSPSVVTFNSLLLILLKR 208
V L+ L+ S R+G F+ ++ + M+ +G ++PSV ++S+L+ L+K+
Sbjct: 121 DG---VNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSV--YDSVLIALVKK 175
Query: 209 GRTNMAKSVFDEMLST--------------YGVAPDTYTFNILIRGFCKNSMVDDGFRFF 254
+A S+ ++L P T N L+ G + M + R F
Sbjct: 176 HELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVF 235
Query: 255 QKMSSFN-CDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSE----DLNPDVVSYTTL 309
+K+ D +YN + G G + A ++ K M ++S PD+ +Y +L
Sbjct: 236 EKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSL 295
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+ C+ +AL+V++E+ G +P+ TY LI+G C+ ++D + G ++ G
Sbjct: 296 IHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY-GEMQYNG 354
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
F PDT N L++G A + EA ++FEKM++ V+ TY++L+ L G E
Sbjct: 355 FVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGF 414
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSY 488
L+ +L KKG + D T + + LC+ GK A + ++ RG + D +
Sbjct: 415 TLFCDLKKKGQFV--DAITFSIVGLQ-----LCREGKLEGAVKLVEEMETRGFSVDLVTI 467
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
L+IG K+G ++ +L+ + N P+ + + ++ L++
Sbjct: 468 SSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKR 512
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 196/456 (42%), Gaps = 41/456 (8%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP----DTYTFNILIRGFCKNSMVDD 249
S+ ++L +L+R + +K + D Y + P ++ + R C+ ++ +
Sbjct: 52 SIPISEPVVLQILRRNSIDPSKKL-DFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGE 110
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
M + D L+D + R+GK ++A V+ M + + LNP V Y ++
Sbjct: 111 VPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSV--YDSV 168
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
L K + AL + ++++ D + G + +
Sbjct: 169 LIALVKKHELRLALSILFKLLEAS---------------------DNHSDDDTGRVIIVS 207
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK-VQPDSATYSVLVRNLCHIGDFERA 428
+ P T +N L+ G A +E +VFEK+ K + D+ +Y++ + GD + A
Sbjct: 208 YLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAA 267
Query: 429 EKLYDELLKKGILLRDDGST--PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DP 485
L+ E+ ++ + GS+ P + Y S+ LC GK A + +L G + D
Sbjct: 268 LSLFKEMKERSSVY---GSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 486 TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
++Y+ILI G CK + + M F PD+ +Y L+DG L+ + A Q +K
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV-LLLEGKIRQNVTLSTHTVRLLFSNG 604
M++ + + T++ ++ GL + G A +L L +G+ +T S ++L G
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC-REG 443
Query: 605 LRDKGFRIVGLLYDNGYMVDMKE----LIIFLSQSR 636
+ ++V + G+ VD+ LI F Q R
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSP-SVVTFNSLLLILLKRGRTNMAKSVFDEML 222
N+ + Y G + KLF +GV+ + T+NS++ +K+G A+ V D+M
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ A D T+N++I+G K D +++ DIV YNTL++ + +A ++
Sbjct: 658 ENF-CAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRL 716
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + M KS +NPDVVSY T++ + EA + M+D G PN VT
Sbjct: 717 DEATQLFDHM--KSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDT 774
Query: 343 TL 344
L
Sbjct: 775 IL 776
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 195 VVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDT-YTFNILIRGFCKNSMVDDGFRF 253
V N+ L I L +G ++A +F E+ + GV T YT+N ++ F K
Sbjct: 594 VDMMNTFLSIYLSKGDLSLACKLF-EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
+M C DI TYN ++ G+ + G+ A V+ + K+ L D+V Y TL+
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYL--DIVMYNTLINAL 710
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
+DEA +F+ M G+ P+ V+YNT+I+ + K+ + + L+ L+ G
Sbjct: 711 GKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
G L +NS++ S+ + G FQ + + M + + T+N ++ L K GR ++
Sbjct: 624 GVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADL 683
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A +V D L+ G D +N LI K + +D+ + F M S +PD+V+YNT++
Sbjct: 684 ASAVLDR-LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMI 742
Query: 274 DGVCRAGKVKTAHNVVKGMV 293
+ +AGK+K A+ +K M+
Sbjct: 743 EVNSKAGKLKEAYKYLKAML 762
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
TYN+++ + G +TA V+ M + D+ +Y +++G D A V +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENF--CAADIATYNVIIQGLGKMGRADLASAVLD 689
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
+ +G + V YNTLI L + ++D+ ++ + ++ G +PD + NT++ + A
Sbjct: 690 RLTKQGGYLDIVMYNTLINALGKATRLDEATQLFD-HMKSNGINPDVVSYNTMIEVNSKA 748
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVL 415
G L EA K + M++ P+ T ++L
Sbjct: 749 GKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 181/457 (39%), Gaps = 42/457 (9%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A++ + + GF + Y +L+ +AR + A + ++ V+ +N
Sbjct: 343 AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG---VRASCWTYNI 399
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI R G + LF +K G +TF+ + L L + G+ A + +EM T
Sbjct: 400 LIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM-ETR 458
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G + D T + L+ GF K D + + + N P+++ +N V+ + + K
Sbjct: 459 GFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDK 518
Query: 286 HNV-----------VKGMVKKSED---------LNPDVVSYTTLLRGYCMKQNIDEALVV 325
+ MV +D + D S + + ++N + L
Sbjct: 519 DYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFG 578
Query: 326 FEEMVDKGLKPNAV------TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
KP++ T+ ++ ++ K+ E+ G +G + T N+
Sbjct: 579 LARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNG---MGVTDLTSYTYNS 635
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
+M+ G A V ++M E D ATY+V+++ L +G + A + D L K+G
Sbjct: 636 MMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQG 695
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKE 498
L + Y ++ L K + +A + F + G D SY +I + K
Sbjct: 696 GYLD-------IVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 499 GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
G + Y+ L ML P+ + +++D L ++ E
Sbjct: 749 GKLKEAYKYLKAMLDAGCLPN-HVTDTILDYLGKEME 784
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 187/407 (45%), Gaps = 49/407 (12%)
Query: 98 RLIKVPSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTV 156
R KVP A++FFNW+ Q GF+H Y ML I G ARNL++ + +++ NG
Sbjct: 164 RCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEK--NGCD 221
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS 216
K + R + LI YG+A + + +F M+ G +N ++ L GR ++A
Sbjct: 222 K-DIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALE 280
Query: 217 VFDEMLS---TYG----------------------VAPDTY---------TFNILIRGFC 242
+ EM+ T+G +A D F L++ FC
Sbjct: 281 FYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFC 340
Query: 243 KNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPD 302
+ + + +++ + D + LV G+CRA ++ A +V M ++ D D
Sbjct: 341 VSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD---D 397
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
Y ++ GY + ++ +AL FE + G P TY +++ L ++++ +K +
Sbjct: 398 SNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFN 457
Query: 363 GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHI 422
+E G PD+ + ++ GH + EA KVF M E ++P +YS+ V+ LC
Sbjct: 458 EMIE-NGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRS 516
Query: 423 GDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSK 469
++ K+++++ I++RDD + ++++ + KNG+ K
Sbjct: 517 SRYDEIIKIFNQMHASKIVIRDDIFSWVISSME-------KNGEKEK 556
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 175/376 (46%), Gaps = 19/376 (5%)
Query: 95 QVLRLIKVPSKA-LKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS 152
+VLR K+ A L+FF+W+ + G+ HN ++Y + +++ G ++ R+ + ++R+
Sbjct: 649 EVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQ- 707
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILL-KRGR- 210
G + +D + +I YGR GL +++ F MK +G+ PS TF L+ +L K+GR
Sbjct: 708 -GCLITQDTW-AIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRN 765
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
A F EM+ + G PD + C+ D + P V Y+
Sbjct: 766 VEEATRTFREMIRS-GFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYS 823
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
+ +CR GK++ A + + + E D +Y +++ G + ++ +AL M
Sbjct: 824 IYIRALCRIGKLEEALSELASF--EGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
+ G KP Y +LI + ++++K+ E + +E P T ++ G+ + G +
Sbjct: 882 EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQ-KMEGESCEPSVVTYTAMICGYMSLGKV 940
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
EA F M E PD TYS + LC E A KL E+L KGI P
Sbjct: 941 EEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI-------APS 993
Query: 451 VAAYKSMFQFLCKNGK 466
++++F L + GK
Sbjct: 994 TINFRTVFYGLNREGK 1009
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 134/331 (40%), Gaps = 17/331 (5%)
Query: 253 FFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRG 312
F +M C T+ ++ R G A K M K L P ++ L+
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEM--KDMGLIPSSSTFKCLITV 757
Query: 313 YCMKQ--NIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGF 370
C K+ N++EA F EM+ G P+ + LCEV K L+ ++G
Sbjct: 758 LCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-- 815
Query: 371 SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEK 430
P T + + C G L EAL + D TY +V L GD ++A
Sbjct: 816 FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKA-- 873
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SY 488
L K +++ G+ P V Y S+ + K + K Q M+ + +P+ +Y
Sbjct: 874 -----LDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETC-QKMEGESCEPSVVTY 927
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
+I G+ G E + M R PD + Y I+ L Q + A + L +ML
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
I P+T F ++ GL ++G H+ A + +
Sbjct: 988 KGIAPSTINFRTVFYGLNREG-KHDLARIAL 1017
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 197/470 (41%), Gaps = 69/470 (14%)
Query: 116 MGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF------------ 163
MGF+ D+ ++L + + + + S+ R + V +EDR
Sbjct: 103 MGFSGEDEK---AQKVLHEEVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVE 159
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSV-GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
N L R + L +++ F +K G S V +N++L I + +M + EM
Sbjct: 160 NVLKRCFKVPHL---AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEM- 215
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG-- 280
G D T+ ILI + K + G F+KM + D YN ++ +C AG
Sbjct: 216 EKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRG 275
Query: 281 ---------------------------------KVKTAHNVVKGMVKKSEDLNPDVVSYT 307
KV ++ MV+ E D Y
Sbjct: 276 DLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY- 334
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
LL+ +C+ I EAL + E+ +K + +A + L+KGLC ++ E+++ +
Sbjct: 335 -LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD--IMK 391
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
D+ +++G+ ++++AL+ FE + + P +TY+ ++++L + FE+
Sbjct: 392 RRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEK 451
Query: 428 AEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT- 486
L++E+++ GI T +VA + L +N + ++A + F + ++G + PT
Sbjct: 452 GCNLFNEMIENGIEPDSVAITAVVAGH------LGQN-RVAEAWKVFSSMEEKGIK-PTW 503
Query: 487 -SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
SY I + C+ ++ ++ M +I+ +I + + GE
Sbjct: 504 KSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 138/331 (41%), Gaps = 31/331 (9%)
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
G YNT++ E + +D + E++ +E G D T L++ + A + +
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELV-SEMEKNGCDKDIRTWTILISVYGKAKKIGK 242
Query: 393 ALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL----------- 441
L VFEKM + + D+ Y++++R+LC G + A + Y E+++KGI
Sbjct: 243 GLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 302
Query: 442 -------------LRDDGSTPLVAAYKSMFQFL----CKNGKTSKAERGFRQLM-KRGTQ 483
+ DD + F +L C +GK +A R+L K
Sbjct: 303 CIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
D ++IL+ G C+ E++ +M RR D DS +Y +I G L++ + A +
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQF 421
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSN 603
+ + KS P ST+ I+ L K + +L ++E I + T V
Sbjct: 422 EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQ 481
Query: 604 GLRDKGFRIVGLLYDNGYMVDMKELIIFLSQ 634
+ +++ + + G K IF+ +
Sbjct: 482 NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKE 512
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 210/470 (44%), Gaps = 57/470 (12%)
Query: 186 MKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP-DTYTFNILIRGFCKN 244
+++ G PS +TF SL+ +++G + A V + M + P D + + +I GFCK
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 245 SMVDDGFRFFQK-MSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVV-------------- 289
+ FF+ + S P++VTY TLV +C+ GKV ++V
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 290 ---------KG------------MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
KG MV+K +N DVVSY+ L+ G + N++EAL + +
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKG--MNRDVVSYSILIDGLSKEGNVEEALGLLGK 302
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
M+ +G++PN +TY +I+GLC++ K+++ + L V G D TL++G C G
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSV-GIEVDEFLYVTLIDGICRKG 361
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
NLN A + M + +QP TY+ ++ LC G A DE+ K G
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVSK--------GVV 409
Query: 449 PLVAAYKSMFQFLCKNGKTSKA-ERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYEL 507
V Y ++ K E R L + D IL+ G + L
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M + PD+ Y ++I G + G+ A + ++ KSS V ++ I+ L K
Sbjct: 470 YRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS-VSAAVCYNRIIDALCK 528
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLY 617
KG + +++ L E + ++ S + + +NG DKG I+GL+Y
Sbjct: 529 KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG-GDKG--ILGLVY 575
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 148/609 (24%), Positives = 248/609 (40%), Gaps = 137/609 (22%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A FN + +G ++ Y +++ + R NLN A + L ++++ ++ +N
Sbjct: 330 EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG---IQPSILTYN 386
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL----------LILLKRGRTNMA 214
++I AG E+ ++ S GV V+T+++LL +L R R A
Sbjct: 387 TVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 215 KSVFDE-----------MLSTYGVA-------------PDTYTFNILIRGFCKNSMVDDG 250
K D ++ YG A PDT T+ +I+G+CK +++
Sbjct: 442 KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Query: 251 FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV---------------------- 288
F ++ + V YN ++D +C+ G + TA V
Sbjct: 502 LEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS 560
Query: 289 ---------VKGMVKKSEDLNPDV----VSYTTLLRGYCMKQNIDEALVVFEEMVDKGL- 334
+ G+V E LN DV ++ LL C + + + A+ V+ M KGL
Sbjct: 561 IHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL--LCKRGSFEAAIEVYMIMRRKGLT 618
Query: 335 ---------------------------------KPNAVTYNTLIKGLCEVQKIDKIKEVL 361
+ + Y +I GLC+ + K +
Sbjct: 619 VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLC 678
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
A + G + +T T N+L+NG C G L EAL++F+ + + P TY +L+ NLC
Sbjct: 679 SFA-KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCK 737
Query: 422 IGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF-RQLMKR 480
G F AEKL D ++ KG++ P + Y S+ CK G+T A R R++M R
Sbjct: 738 EGLFLDAEKLLDSMVSKGLV-------PNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR 790
Query: 481 GTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAY 540
T D + +I G+CK+G E + +N D + LI G KG A
Sbjct: 791 VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEAR 850
Query: 541 QTLQKMLKS-SIVPTTSTFHSILAGLLKKGYAHESAS----LVVLLLEGKIRQNVTLSTH 595
L++ML S S+V + + LA ES S LV L +G++ Q + +
Sbjct: 851 GLLREMLVSESVVKLINRVDAELA---------ESESIRGFLVELCEQGRVPQAIKILDE 901
Query: 596 TVRLLFSNG 604
++ +G
Sbjct: 902 ISSTIYPSG 910
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 134/562 (23%), Positives = 250/562 (44%), Gaps = 31/562 (5%)
Query: 160 DRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
DRF +R R F ++ ++ + S ++ + ++ + L R A+ +
Sbjct: 30 DRF----LRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFIN 85
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDD---GFRFFQK-MSSFNCDPDIVTYNTLVDG 275
+S + P T+ + LI GF DD G + + + P +T+ +L+
Sbjct: 86 IHISKASIFPRTHMLDSLIHGFSITR--DDPSKGLLILRDCLRNHGAFPSSLTFCSLIYR 143
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG-L 334
G++ A V++ M K+ + D + ++ G+C + AL FE VD G L
Sbjct: 144 FVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVL 203
Query: 335 KPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEAL 394
PN VTY TL+ LC++ K+D++++++ LE GF D + ++G+ G L +AL
Sbjct: 204 VPNLVTYTTLVSALCQLGKVDEVRDLVR-RLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAY 454
+M+E + D +YS+L+ L G+ E A L +++K+G+ P + Y
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV-------EPNLITY 315
Query: 455 KSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLR 513
++ + LCK GK +A F +++ G + D Y LI G C++G + +L M +
Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375
Query: 514 RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHE 573
R P Y ++I+GL G A + + +V T+ ++L +K
Sbjct: 376 RGIQPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDA 430
Query: 574 SASLVVLLLEGKIRQNVTLSTHTVR---LLFSNGLRDKGFRIVGLLYDNGYMVDMKELII 630
+ LE KI ++ + ++ L+ + G D +R + + +I
Sbjct: 431 VLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIK 490
Query: 631 FLSQSRKLLEANKLLLFCLEKHHNIDIDMC-NTVIEGLCKMKKLSEAFGLYYELVEKGNH 689
++ ++ EA L +F + ++ +C N +I+ LCK L A + EL EKG +
Sbjct: 491 GYCKTGQIEEA--LEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLY 548
Query: 690 QPLSCLENLRVALEAGGRSKEV 711
+ L ++ A G K +
Sbjct: 549 LDIHTSRTLLHSIHANGGDKGI 570
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/541 (24%), Positives = 232/541 (42%), Gaps = 38/541 (7%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
+++++ + +LI R G + + M+ G+ PS++T+N+++ L GR + A
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD 402
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
V + GV D T++ L+ + K +D ++ D+V N L+
Sbjct: 403 EV------SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKA 456
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
G A + + M + DL PD +Y T+++GYC I+EAL +F E+ +
Sbjct: 457 FLLMGAYGEADALYRAMPEM--DLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS 514
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG-HCNAGNLNEAL 394
AV YN +I LC+ +D EVL E G D T TL++ H N G+ L
Sbjct: 515 A-AVCYNRIIDALCKKGMLDTATEVLIELWE-KGLYLDIHTSRTLLHSIHANGGD-KGIL 571
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST--PLVA 452
+ + + + + LC G FE A ++Y + +KG+ + + LV
Sbjct: 572 GLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD 631
Query: 453 AYKSMFQFL--CKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVL 510
+S+ +L G+T+ + + D Y I+I G CKEG L
Sbjct: 632 NLRSLDAYLLVVNAGETTLS-----------SMDVIDYTIIINGLCKEGFLVKALNLCSF 680
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGY 570
R ++ Y SLI+GL Q+G + A + + +VP+ T+ ++ L K+G
Sbjct: 681 AKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGL 740
Query: 571 AHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIV-----GLLYDNGYMVDM 625
++ L+ ++ + N+ + V G + R+V G + + + V
Sbjct: 741 FLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTV-- 798
Query: 626 KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCN--TVIEGLCKMKKLSEAFGLYYEL 683
+I + + EA L +F K NI D +I+G C ++ EA GL E+
Sbjct: 799 SSMIKGYCKKGDMEEA--LSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Query: 684 V 684
+
Sbjct: 857 L 857
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 160/325 (49%), Gaps = 12/325 (3%)
Query: 95 QVLRLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN 153
QVL+ + AL FF WL Q GF H+ +Y M+ LGRA+ L + R
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDG- 394
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
+ +N LI SYGRA E++ +F M+ G P VT+ +L+ I K G ++
Sbjct: 395 --CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A ++ M + G++PDT+T++++I K + + F +M C P++VTYN ++
Sbjct: 453 AMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR--GYCMKQNIDEALVVFEEMVD 331
D +A + A + + M ++ PD V+Y+ ++ G+C ++EA VF EM
Sbjct: 512 DLHAKARNYQNALKLYRDM--QNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQ 567
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
K P+ Y L+ + ++K + + L G P+ T N+L++ +
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA-GLRPNVPTCNSLLSTFLRVNKIA 626
Query: 392 EALKVFEKMMEWKVQPDSATYSVLV 416
EA ++ + M+ ++P TY++L+
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLLL 651
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 15/310 (4%)
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
+K+ D +YTT++ + + +EMV G +PN VTYN LI
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+++ V ++ G PD T TL++ H AG L+ A+ ++++M + PD+ TY
Sbjct: 414 YLNEAMNVFN-QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
SV++ L G A KL+ E++ D G TP + Y M K A +
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMV-------DQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 473 GFRQLMKRGTQ-DPTSYKIL--IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
+R + G + D +Y I+ ++GHC G E + M ++N+ PD +Y L+D
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQN 589
+ G A+Q Q ML + + P T +S+L+ L+ E+ L+ +L +R
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP- 642
Query: 590 VTLSTHTVRL 599
+L T+T+ L
Sbjct: 643 -SLQTYTLLL 651
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 139/347 (40%), Gaps = 80/347 (23%)
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV 276
+ DEM+ G P+T T+N LI + + + +++ F +M C PD VTY TL+D
Sbjct: 386 LLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
+AG + A ++ + M ++ L+PD +Y+ ++ ++ A +F EMVD+G P
Sbjct: 445 AKAGFLDIAMDMYQRM--QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
N VTY N +M+ H A N ALK+
Sbjct: 503 NLVTY------------------------------------NIMMDLHAKARNYQNALKL 526
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
+ M +PD TYS+++ L H G E AE ++ E+ +K +
Sbjct: 527 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI--------------- 571
Query: 457 MFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNF 516
D Y +L+ K G E ++ ML
Sbjct: 572 --------------------------PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 517 DPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
P+ SL+ L+ + AY+ LQ ML + P+ T+ +L+
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 160/325 (49%), Gaps = 12/325 (3%)
Query: 95 QVLRLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN 153
QVL+ + AL FF WL Q GF H+ +Y M+ LGRA+ L + R
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDG- 394
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
+ +N LI SYGRA E++ +F M+ G P VT+ +L+ I K G ++
Sbjct: 395 --CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A ++ M + G++PDT+T++++I K + + F +M C P++VTYN ++
Sbjct: 453 AMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR--GYCMKQNIDEALVVFEEMVD 331
D +A + A + + M ++ PD V+Y+ ++ G+C ++EA VF EM
Sbjct: 512 DLHAKARNYQNALKLYRDM--QNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQ 567
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
K P+ Y L+ + ++K + + L G P+ T N+L++ +
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA-GLRPNVPTCNSLLSTFLRVNKIA 626
Query: 392 EALKVFEKMMEWKVQPDSATYSVLV 416
EA ++ + M+ ++P TY++L+
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLLL 651
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 15/310 (4%)
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
+K+ D +YTT++ + + +EMV G +PN VTYN LI
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+++ V ++ G PD T TL++ H AG L+ A+ ++++M + PD+ TY
Sbjct: 414 YLNEAMNVFN-QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
SV++ L G A KL+ E++ D G TP + Y M K A +
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMV-------DQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 473 GFRQLMKRGTQ-DPTSYKIL--IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
+R + G + D +Y I+ ++GHC G E + M ++N+ PD +Y L+D
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQN 589
+ G A+Q Q ML + + P T +S+L+ L+ E+ L+ +L +R
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP- 642
Query: 590 VTLSTHTVRL 599
+L T+T+ L
Sbjct: 643 -SLQTYTLLL 651
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 139/347 (40%), Gaps = 80/347 (23%)
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV 276
+ DEM+ G P+T T+N LI + + + +++ F +M C PD VTY TL+D
Sbjct: 386 LLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
+AG + A ++ + M ++ L+PD +Y+ ++ ++ A +F EMVD+G P
Sbjct: 445 AKAGFLDIAMDMYQRM--QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
N VTY N +M+ H A N ALK+
Sbjct: 503 NLVTY------------------------------------NIMMDLHAKARNYQNALKL 526
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
+ M +PD TYS+++ L H G E AE ++ E+ +K +
Sbjct: 527 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI--------------- 571
Query: 457 MFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNF 516
D Y +L+ K G E ++ ML
Sbjct: 572 --------------------------PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 517 DPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
P+ SL+ L+ + AY+ LQ ML + P+ T+ +L+
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 16/328 (4%)
Query: 196 VTFNSLLLILLKRGRTNMAKSV--FDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
V ++++L L +MAK F + G PD+ TFN + K + + R
Sbjct: 321 VGYDAVLYCL---SNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRI 377
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
F S P Y LV + A + +K M + L V SY ++
Sbjct: 378 FDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM--GVDGLLSSVYSYNAVIDCL 435
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
C + I+ A + EM D+G+ PN VT+NT + G + K+ VLE L V GF PD
Sbjct: 436 CKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL-VHGFKPD 494
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
T + ++N C A + +A F++M+EW ++P+ TY++L+R+ C GD +R+ KL+
Sbjct: 495 VITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFA 554
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILI 492
+ ++++G +P + AY + Q CK K KAE + +++ G + D +Y LI
Sbjct: 555 K-------MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDS 520
+ G E+ + R PDS
Sbjct: 608 KALSESGRESEAREMFSSIERHGCVPDS 635
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 220/501 (43%), Gaps = 21/501 (4%)
Query: 103 PSKALKFFNWLPQMGFTH-NDQSYFLMLEILGRARNLNVARNFLFS---IKRKSNGTVKL 158
P +L+F+ W+ + DQS + +LG A L L S +K + ++
Sbjct: 89 PLHSLRFYLWVSNFDPVYAKDQS---LKSVLGNA--LFRKGPLLLSMELLKEIRDSGYRI 143
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
D LI S+GR GL + +F + +G+ PS +N+++ L+K ++A F
Sbjct: 144 SDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKF 203
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
+M S G PD +T+NILI G CK +VD+ R ++M P++ TY L+DG
Sbjct: 204 QQMRSD-GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
AG+V A ++ M + LNP+ + T + G +A V ++K
Sbjct: 263 AGRVDEALKQLEMM--RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQR 320
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
V Y+ ++ L + + L E G+ PD+ T N M+ +L E ++F+
Sbjct: 321 VGYDAVLYCLSNNSMAKETGQFLRKIGE-RGYIPDSSTFNAAMSCLLKGHDLVETCRIFD 379
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+ V+P Y VLV+ L + F ++ ++ G+ DG V +Y ++
Sbjct: 380 GFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM---GV----DGLLSSVYSYNAVI 432
Query: 459 QFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
LCK + A ++ RG + + ++ + G+ G + + +L +L F
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Query: 518 PDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
PD + +I+ L + E A+ ++ML+ I P T++ ++ G S L
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 578 VVLLLEGKIRQNVTLSTHTVR 598
+ E + ++ T++
Sbjct: 553 FAKMKENGLSPDLYAYNATIQ 573
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 162/339 (47%), Gaps = 14/339 (4%)
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSF-NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
F I +C+ +D F M + P++ YNT+V+G ++G + A + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
K E PDV ++ L+ GYC D AL +F EM +KG +PN V++NTLI+G
Sbjct: 220 GK--ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 353 KIDKIKEVLEGALEVGG-FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
KI++ ++ +E+G FS TC + L++G C G +++A + ++ +V P
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEI--LVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
Y LV LC RA ++ +EL KK G TP A ++ + L K+G+T KA
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKK-------GQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 472 RGFRQLMKRGT-QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
++M G D ++ +L+ C L +L + ++PD Y L+ G
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 531 LQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
++G + +ML ++P T++ ++ GL G
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 190/438 (43%), Gaps = 61/438 (13%)
Query: 110 FNWLPQMG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRK----SNGTVKLED--RF 162
FNW + F H+ S+ M L + L + S+G +
Sbjct: 100 FNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPI 159
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKS-VGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F S I +Y RA ++ F +MK + P+V +N+++ +K G + A + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
PD TFNILI G+C++S D F++M C+P++V++NTL+ G +GK
Sbjct: 220 -GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 282 ----VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPN 337
VK A+ +++ + SE + L+ G C + +D+A + ++++K + P+
Sbjct: 279 IEEGVKMAYEMIELGCRFSE------ATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
Y +L++ LC K + E++E L G +P TL+ G +G +A
Sbjct: 333 EFDYGSLVEKLCGENKAVRAMEMME-ELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
EKMM + PDS T+++L+R+LC A +L +L G P
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR-------LLASSKGYEP-------- 436
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
D T+Y +L+ G KEG + G L+ ML ++
Sbjct: 437 --------------------------DETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDML 470
Query: 518 PDSEIYQSLIDGLLQKGE 535
PD Y L+DGL G+
Sbjct: 471 PDIFTYNRLMDGLSCTGK 488
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 143/330 (43%), Gaps = 39/330 (11%)
Query: 134 RARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSP 193
RAR ++ A ++KR +G + +N+++ Y ++G ++++ + M P
Sbjct: 169 RARKMDYALLAFDTMKRLIDGKPNVG--VYNTVVNGYVKSGDMDKALRFYQRMGKERAKP 226
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
V TFN L+ + + ++A +F EM G P+ +FN LIRGF + +++G +
Sbjct: 227 DVCTFNILINGYCRSSKFDLALDLFREM-KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKM 285
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
+M C T LVDG+CR G+V A +V ++ K + P Y +L+
Sbjct: 286 AYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKR--VLPSEFDYGSLVEKL 343
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG----- 368
C + A+ + EE+ KG P + TL++GL + + +K +E + G
Sbjct: 344 CGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDS 403
Query: 369 -----------------------------GFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
G+ PD T + L++G G E + +
Sbjct: 404 VTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNE 463
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
M++ + PD TY+ L+ L G F R +
Sbjct: 464 MLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 33/267 (12%)
Query: 422 IGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK-R 480
I + RA K+ LL + R P V Y ++ K+G KA R ++++ K R
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 481 GTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAY 540
D ++ ILI G+C+ F+ +L M + +P+ + +LI G L G+
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 541 QTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLL 600
+ +M++ + +T ++ GL ++G ++ LV+ LL
Sbjct: 284 KMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK---------------- 327
Query: 601 FSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMC 660
R++ +D G +V+ L K + A +++ +K C
Sbjct: 328 ----------RVLPSEFDYGSLVEK------LCGENKAVRAMEMMEELWKKGQTPCFIAC 371
Query: 661 NTVIEGLCKMKKLSEAFGLYYELVEKG 687
T++EGL K + +A G +++ G
Sbjct: 372 TTLVEGLRKSGRTEKASGFMEKMMNAG 398
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 171/330 (51%), Gaps = 12/330 (3%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+SL+ + + +++V + M+ +G+ VV L+ L K A V M
Sbjct: 17 SSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRM-K 75
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G++P+ T++ LI G CK+ + D R +M S +P+++T++ L+D + GK+
Sbjct: 76 DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS 135
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
+V K M++ S ++P+V +Y++L+ G CM +DEA+ + + M+ KG PN VTY+T
Sbjct: 136 KVDSVYKMMIQMS--IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 193
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
L G + ++D ++L+ + G + +T + NTL+ G+ AG ++ AL VF M
Sbjct: 194 LANGFFKSSRVDDGIKLLDD-MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN 252
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
+ P+ +Y++++ L G+ E+A ++ + K R+D + Y M +CK
Sbjct: 253 GLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKT----RNDLD---IITYTIMIHGMCK 305
Query: 464 NGKTSKAERGFRQL-MKRGTQDPTSYKILI 492
+A F +L KR D +Y I+I
Sbjct: 306 ACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 140/269 (52%), Gaps = 4/269 (1%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++SLI ++G ++ + M S ++P+V+TF++L+ KRG+ + SV+ +M+
Sbjct: 86 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVY-KMM 144
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ P+ +T++ LI G C ++ VD+ + M S C P++VTY+TL +G ++ +V
Sbjct: 145 IQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRV 204
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
++ M ++ N VS TL++GY ID AL VF M GL PN +YN
Sbjct: 205 DDGIKLLDDMPQRGVAAN--TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYN 262
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
++ GL +++K E ++ D T +++G C A + EA +F K+
Sbjct: 263 IVLAGLFANGEVEKALSRFE-HMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKF 321
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKL 431
+V+PD Y++++ L G A+ L
Sbjct: 322 KRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 159/345 (46%), Gaps = 46/345 (13%)
Query: 226 GVAPDTYTFNILIRGFC-----------------------------------KNSMVDDG 250
G+ PD T + L+ GFC KN +V
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 251 FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLL 310
++M P++VTY++L+ G+C++G++ A + M S+ +NP+V++++ L+
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM--DSKKINPNVITFSALI 125
Query: 311 RGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGF 370
Y + + + V++ M+ + PN TY++LI GLC ++D+ ++L+ + G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS-KGC 184
Query: 371 SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEK 430
+P+ T +TL NG + +++ +K+ + M + V ++ + + L++ G + A
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 244
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK-RGTQDPTSYK 489
++ + G++ P + +Y + L NG+ KA F + K R D +Y
Sbjct: 245 VFGYMTSNGLI-------PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 297
Query: 490 ILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
I+I G CK + Y+L + + +PD + Y +I L + G
Sbjct: 298 IMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 157/352 (44%), Gaps = 11/352 (3%)
Query: 256 KMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCM 315
KM +PDIVT ++LV+G C + +K A V M K + DVV T L+ C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMG--IKRDVVVDTILIDTLCK 60
Query: 316 KQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTC 375
+ + AL V + M D+G+ PN VTY++LI GLC+ ++ + L ++ +P+
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLH-EMDSKKINPNVI 119
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
T + L++ + G L++ V++ M++ + P+ TYS L+ LC + A K+ D +
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 436 LKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILIIG 494
+ K G TP V Y ++ K+ + + + +RG T S LI G
Sbjct: 180 ISK-------GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKG 232
Query: 495 HCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPT 554
+ + G + + M P+ Y ++ GL GE A + M K+
Sbjct: 233 YFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLD 292
Query: 555 TSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLR 606
T+ ++ G+ K E+ L L ++ + T + L G+R
Sbjct: 293 IITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMR 344
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 11/319 (3%)
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G PD T ++L+NG C + ++ +A+ V +M + ++ D ++L+ LC R
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK----NRL 63
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL-MKRGTQDPTS 487
E+LK+ ++D G +P V Y S+ LCK+G+ + AER ++ K+ + +
Sbjct: 64 VVPALEVLKR---MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
+ LI + K G + +M++ + DP+ Y SLI GL A + L M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 548 KSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRD 607
P T+ ++ G K + L+ + + + N ++ F G D
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 608 KGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLL--LFCLEKHHN-IDIDMCNTVI 664
+ G + NG + +++ I L+ E K L ++K N +DI +I
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 665 EGLCKMKKLSEAFGLYYEL 683
G+CK + EA+ L+Y+L
Sbjct: 301 HGMCKACMVKEAYDLFYKL 319
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 4/246 (1%)
Query: 446 GSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAG 504
G P + S+ C + A Q+ K G + D ILI CK
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 505 YELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
E+L M R P+ Y SLI GL + G A + L +M I P TF +++
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 565 LLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY--- 621
K+G + S+ ++++ I NV + + L + D+ +++ L+ G
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 622 MVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYY 681
+V L +S ++ + KLL ++ + CNT+I+G + K+ A G++
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 682 ELVEKG 687
+ G
Sbjct: 248 YMTSNG 253
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 42/368 (11%)
Query: 106 ALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+L FF WL +T S ++ L + + A++FL K E
Sbjct: 96 SLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFL------DTTGFKPEPTLLE 149
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN--------MAKS 216
++ GL +E+++++ +K +G+S SVVT NS+LL LK + + M +S
Sbjct: 150 QYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES 209
Query: 217 VFD---------------------EMLST---YGVAPDTYTFNILIRGFCKNSMVDDGFR 252
FD E+L G+ P Y + LI GFC+
Sbjct: 210 EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 253 FFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRG 312
M ++N P + Y ++ G+C K A+ + K + K + PD V YTT++RG
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL--KDKGYAPDRVVYTTMIRG 327
Query: 313 YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
+C K + A ++ EM+ KG++PN YN +I G + +I + E + G+
Sbjct: 328 FCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLV-EAFYNEMLRNGYGG 386
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
+ NT++ G C+ G +EA ++F+ M E V P++ TY+ L++ C E+ KLY
Sbjct: 387 TMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLY 446
Query: 433 DELLKKGI 440
EL G+
Sbjct: 447 KELKALGL 454
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
Query: 178 ESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNIL 237
E+ +F ++K G +P V + +++ ++G A+ ++ EM+ G+ P+ + +N++
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK-GMRPNEFAYNVM 359
Query: 238 IRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSE 297
I G K + F+ +M +++ NT++ G C GK A + K M +
Sbjct: 360 IHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETG- 418
Query: 298 DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
+ P+ ++Y L++G+C + +++ L +++E+ GLKP+ + Y L++ L
Sbjct: 419 -VTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 140/357 (39%), Gaps = 27/357 (7%)
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
P V+ N L L + + + K L+ GF P+ L + G + EA++
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFLD----TTGFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
V+ + + + T + ++ +R +L+ E+++ S +
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVE---------SEFDSERIR 217
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKI--LIIGHCKEGTFEAGYELLVLMLR 513
+ + LC G S+ +Q +K+G DP Y LI G C+ G + E+L M+
Sbjct: 218 CLIRALCDGGDVSEGYELLKQGLKQGL-DPGQYVYAKLISGFCEIGNYACMSEVLHTMIA 276
Query: 514 RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHE 573
N P IYQ +I GL + L AY + + P + +++ G +KG+
Sbjct: 277 WNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGS 336
Query: 574 SASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYD----NGY---MVDMK 626
+ L +++ +R N + F G +V Y+ NGY M+
Sbjct: 337 ARKLWFEMIKKGMRPNEFAYNVMIHGHFKRG----EISLVEAFYNEMLRNGYGGTMLSCN 392
Query: 627 ELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYEL 683
+I K EA ++ E + N +I+G CK K+ + LY EL
Sbjct: 393 TMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A F L G+ + Y M+ L AR F + +K ++ + +N
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG---MRPNEFAYN 357
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+I + + G + M G ++++ N+++ G+++ A +F M T
Sbjct: 358 VMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSET 417
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
GV P+ T+N LI+GFCK + V+ G + ++++ + P + Y LV + + V T
Sbjct: 418 -GVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVAT 476
Query: 285 AHNV 288
+ N+
Sbjct: 477 SLNL 480
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/546 (22%), Positives = 248/546 (45%), Gaps = 37/546 (6%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYF----LMLEILGRARNLNVARNFLFSIKR-------- 150
P AL+F+NW+ + ++ F +M+ +L +R + A + + ++
Sbjct: 71 PKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSP 130
Query: 151 --------KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL 202
+S F+SL+R+ + G Q + ++ ++ G SV N+ +
Sbjct: 131 LHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFM 190
Query: 203 LILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNC 262
LL + V+ EM + G + TFN++I FCK S + + F +M
Sbjct: 191 GCLLNVNEIDRFWKVYKEM-DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGV 249
Query: 263 DPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSED-LNPDVVSYTTLLRGYCMKQNIDE 321
P++V++N ++DG C+ G ++ A ++ M S + ++P+ V+Y +++ G+C +D
Sbjct: 250 WPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDL 309
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLM 381
A + +MV G+ N TY L+ D+ + + + G +T N+++
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCD-EMTSKGLVVNTVIYNSIV 368
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
G++ A+ V M +Q D T +++VR LC G + A + ++ +K L
Sbjct: 369 YWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKK-L 427
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGT 500
+ D + + ++ ++ K + A++ ++ +G + D S+ LI G+ KEG
Sbjct: 428 VED------IVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Query: 501 FEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHS 560
E E+ M++ N + IY S+++GL ++G A + M IV T+++
Sbjct: 482 LERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV----TYNT 537
Query: 561 ILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRL--LFSNGLRDKGFRIVGLLYD 618
+L LK G E+ ++ + + ++V+L T + + L G +K ++ + +
Sbjct: 538 LLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVE 597
Query: 619 NGYMVD 624
G + D
Sbjct: 598 RGVVPD 603
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 190/463 (41%), Gaps = 89/463 (19%)
Query: 181 KLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRG 240
K++ M S+G +V TFN ++ K + A SVF ML GV P+ +FN++I G
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKC-GVWPNVVSFNMMIDG 262
Query: 241 FCKNSMVDDGFRFFQKMSSFN---CDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSE 297
CK + + KM + P+ VTYN++++G C+AG++ A + MVK
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 298 DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL------------- 344
D N +Y L+ Y + DEAL + +EM KGL N V YN++
Sbjct: 323 DCNER--TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGA 380
Query: 345 ----------------------IKGLC---------EVQKIDKIKEVLE----------- 362
++GLC E Q+ K+++E
Sbjct: 381 MSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHH 440
Query: 363 --------------GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
G++ V G S D + TL++G+ G L AL++++ M++ +
Sbjct: 441 FVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSN 500
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTS 468
Y+ +V L G AE + + + K I+ Y ++ K G
Sbjct: 501 LVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV-----------TYNTLLNESLKTGNVE 549
Query: 469 KAERGFRQLMKRGTQDPTS---YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQS 525
+A+ ++ K+ + S + I+I CK G++E E+L M+ R PDS Y +
Sbjct: 550 EADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGT 609
Query: 526 LIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
LI + + ++ + P + SI+ LL +
Sbjct: 610 LITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDR 652
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 35/317 (11%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
V +R + +L+ +YGRAG E+++L M S G+ + V +NS++ L G A
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
SV +M ++ + D +T I++RG C+N V + F +++S DIV +NTL+
Sbjct: 382 SVLRDM-NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHH 440
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
R K+ A ++ M+ + L+ D +S+ TL+ GY + ++ AL +++ M+
Sbjct: 441 FVRDKKLACADQILGSMLVQG--LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKT 498
Query: 336 PNAVTYNTLIKGLC---------------EVQKIDKIKEVLEGALEVGGF---------- 370
N V YN+++ GL E++ I +L +L+ G
Sbjct: 499 SNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Query: 371 -------SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
S T N ++N C G+ +A +V + M+E V PDS TY L+ +
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Query: 424 DFERAEKLYDELLKKGI 440
E+ +L+D L+ +G+
Sbjct: 619 SQEKVVELHDYLILQGV 635
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 168/401 (41%), Gaps = 50/401 (12%)
Query: 287 NVVKGMVKKSEDL--NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+V+ G+++ + +PDV + +L+R + A V E+ +G + N
Sbjct: 132 HVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNF 189
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ L V +ID+ +V + ++ G+ + T N ++ C L EAL VF +M++
Sbjct: 190 MGCLLNVNEIDRFWKVYK-EMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCG 248
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
V P+ ++++++ C GD A +LL K ++ + +P Y S+ CK
Sbjct: 249 VWPNVVSFNMMIDGACKTGDMRFAL----QLLGKMGMMSGNFVSPNAVTYNSVINGFCKA 304
Query: 465 GKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
G+ AER ++K G + +Y L+ + + G+ + L M + ++ IY
Sbjct: 305 GRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIY 364
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
S++ L +G+ A L+ M ++ T ++ GL + GY E+ + E
Sbjct: 365 NSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISE 424
Query: 584 GKIRQNV----TLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLL 639
K+ +++ TL H VR +KL
Sbjct: 425 KKLVEDIVCHNTLMHHFVR------------------------------------DKKLA 448
Query: 640 EANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLY 680
A+++L L + ++D T+I+G K KL A +Y
Sbjct: 449 CADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIY 489
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N+L+ + R + ++ SM G+S ++F +L+ LK G+ A ++D M+
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ + +N ++ G K M M DIVTYNTL++ + G V+
Sbjct: 495 MNKTS-NLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVE 549
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A +++ M K+ + + +V++ ++ C + ++A V + MV++G+ P+++TY T
Sbjct: 550 EADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGT 609
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
LI + + +K+ E L L + G +P
Sbjct: 610 LITSFSKHRSQEKVVE-LHDYLILQGVTP 637
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 166/334 (49%), Gaps = 26/334 (7%)
Query: 92 TGFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRK 151
T QVL K+ KA++ F+ + + G N+ +Y L+L NL VA L +
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL-------NLLVAEGQLVRL--- 359
Query: 152 SNGTVKLEDRF-----FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILL 206
+G V++ R+ ++ L+R+ + G E+ +LF M S V ++ S+L L
Sbjct: 360 -DGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418
Query: 207 KRGRTNMAKSVFDEMLSTY---GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD 263
G+T A EMLS GV DT +N + K + F+KM
Sbjct: 419 GAGKTIEAI----EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPS 474
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEAL 323
PDI TYN L+ R G+V A N+ + + + D PD++SY +L+ ++DEA
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEEL--ERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 324 VVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG 383
V F+EM +KGL P+ VTY+TL++ + ++++ + E L V G P+ T N L++
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML-VKGCQPNIVTYNILLDC 591
Query: 384 HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
G EA+ ++ KM + + PDS TY+VL R
Sbjct: 592 LEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 177/372 (47%), Gaps = 29/372 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ +IR+ GR G E+V LF M + G++ +VV +N+L+ +L K + A VF M+
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMV 332
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVT---YNTLVDGVCRA 279
T G P+ YT+++L+ N +V +G + + +T Y+ LV + +
Sbjct: 333 ET-GCRPNEYTYSLLL-----NLLVAEG-QLVRLDGVVEISKRYMTQGIYSYLVRTLSKL 385
Query: 280 GKVKTAHNVVKGM----VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
G V AH + M VK D SY ++L C EA+ + ++ +KG+
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERD------SYMSMLESLCGAGKTIEAIEMLSKIHEKGVV 439
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
+ + YNT+ L ++++I I ++ E ++ G SPD T N L+ G ++EA+
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFE-KMKKDGPSPDIFTYNILIASFGRVGEVDEAIN 498
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
+FE++ +PD +Y+ L+ L GD + A + E+ +KG+ P V Y
Sbjct: 499 IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL-------NPDVVTYS 551
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
++ + K + A F +++ +G Q + +Y IL+ K G +L M ++
Sbjct: 552 TLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ 611
Query: 515 NFDPDSEIYQSL 526
PDS Y L
Sbjct: 612 GLTPDSITYTVL 623
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 202/439 (46%), Gaps = 21/439 (4%)
Query: 121 NDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESV 180
N +Y +L+ R+R+ + A + I+R G KL+ +N L+ + + +++
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRR---GGHKLDIFAYNMLLDALAKD---EKAC 255
Query: 181 KLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRG 240
++F MK T+ ++ + + G+ + A +F+EM+ T G+ + +N L++
Sbjct: 256 QVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI-TEGLTLNVVGYNTLMQV 314
Query: 241 FCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLN 300
K MVD + F +M C P+ TY+ L++ + G++ + G+V+ S+
Sbjct: 315 LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR----LDGVVEISKRYM 370
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
+ Y+ L+R ++ EA +F +M +K +Y ++++ LC K + E+
Sbjct: 371 TQGI-YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
L E G + DT NT+ + ++ +FEKM + PD TY++L+ +
Sbjct: 430 LSKIHEKGVVT-DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
+G+ + A +++EL + P + +Y S+ L KNG +A F+++ ++
Sbjct: 489 RVGEVDEAINIFEELERSD-------CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 481 G-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
G D +Y L+ K E Y L ML + P+ Y L+D L + G A
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Query: 540 YQTLQKMLKSSIVPTTSTF 558
KM + + P + T+
Sbjct: 602 VDLYSKMKQQGLTPDSITY 620
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/521 (22%), Positives = 229/521 (43%), Gaps = 58/521 (11%)
Query: 95 QVLRLIKVPSKALKFFNWLPQM-GFTHNDQS-YFLMLEILGRAR---NLNVARNFLFS-I 148
++L+ + P A++FF +P + ++ ND Y ++ IL R+ + R+ L S +
Sbjct: 104 EILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMV 163
Query: 149 KRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKR 208
K +G + N LI +G Q ++L +K + + T+ LL L+
Sbjct: 164 KSNVHGNIST----VNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKCLLQAYLRS 216
Query: 209 GRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVT 268
+ A V+ E+ G D + +N+L+ K+ + + F+ M +C D T
Sbjct: 217 RDYSKAFDVYCEIRRG-GHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYT 272
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
Y ++ + R GK A + M+ +E L +VV Y TL++ + +D+A+ VF
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMI--TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 329 MVDKGLKPNAVTYNTLIKGLC---EVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
MV+ G +PN TY+ L+ L ++ ++D + E+ + + G +S TL+ L
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKL----- 385
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL---- 441
G+++EA ++F M + V+ + +Y ++ +LC G A ++ ++ +KG++
Sbjct: 386 --GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM 443
Query: 442 ------------------------LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL 477
++ DG +P + Y + + G+ +A F +L
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 478 MKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEP 536
+ + D SY LI K G + + M + +PD Y +L++ +
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 537 LLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
+AY ++ML P T++ +L L K G E+ L
Sbjct: 564 EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 156/365 (42%), Gaps = 26/365 (7%)
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+ D+++ +L+ ++ + T+N L+ N +L L++ +K W ++ +S TY
Sbjct: 151 RFDRVRSILDSMVK-SNVHGNISTVNILIGFFGNTEDLQMCLRLVKK---WDLKMNSFTY 206
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
L++ D+ +A +Y E+ + G L + AY + L K+ K +
Sbjct: 207 KCLLQAYLRSRDYSKAFDVYCEIRRGGHKLD-------IFAYNMLLDALAKDEKACQV-- 257
Query: 473 GFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
F + KR + D +Y I+I + G + L M+ + Y +L+ +L
Sbjct: 258 -FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ-VL 315
Query: 532 QKGEPL-LAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
KG+ + A Q +M+++ P T+ +L L+ +G +V + K
Sbjct: 316 AKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEI---SKRYMTQ 372
Query: 591 TLSTHTVRLLFSNGLRDKGFRIVGLLYD---NGYMVDMKELIIFLSQSRKLLEANKLLLF 647
+ ++ VR L G + R+ ++ G ++ L + K +EA ++L
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 648 CLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGR 707
EK D M NTV L K+K++S L+ ++ + G P + + + + GR
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG---PSPDIFTYNILIASFGR 489
Query: 708 SKEVE 712
EV+
Sbjct: 490 VGEVD 494
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 150/295 (50%), Gaps = 11/295 (3%)
Query: 134 RARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSP 193
++ NL+ A++ SI S + L+ +F NS+++SYG + ++VKLF + + P
Sbjct: 61 KSPNLSDAKSLFNSIAATSR--IPLDLKFHNSVLQSYGSIAVVNDTVKLFQHI--LKSQP 116
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFD-----EMLSTYGVAPDTYTFNILIRGFCKNSMVD 248
+ S LILL S+ + ++ G+ PD T +I +R C+ VD
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 249 DGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTT 308
+ ++++ + PD TYN L+ +C+ + + V M + D+ PD+VS+T
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTI 235
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
L+ C +N+ EA+ + ++ + G KP+ YNT++KG C + K + V + E
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE-E 294
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
G PD T NTL+ G AG + EA + M++ +PD+ATY+ L+ +C G
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 14/291 (4%)
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM--SSFNCDPDIVTYNT 271
AKS+F+ + +T + D N +++ + ++V+D + FQ + S N P T+
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 272 LVDGVCRA--GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
L+ CRA + H V+ MV L PD V+ +R C +DEA + +E+
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNG--LEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
+K P+ TYN L+K LC+ + + + E ++ + PD + L++ CN+ N
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
L EA+ + K+ +PD Y+ +++ C + A +Y + ++++G P
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK-------MKEEGVEP 298
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEG 499
Y ++ L K G+ +A + ++ G + D +Y L+ G C++G
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 107/277 (38%), Gaps = 45/277 (16%)
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMV--DKGLKPNAVTYNTLIKGLCEV--QKIDKI 357
D+ + ++L+ Y +++ + +F+ ++ +P T+ L+ C I +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 358 KEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
VL + G PD T + + C G ++EA + +++ E PD+ TY+ L++
Sbjct: 144 HRVLNLMVN-NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 418 NLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL 477
+LC D + DE+ RDD F K
Sbjct: 203 HLCKCKDLHVVYEFVDEM-------RDD--------------FDVK-------------- 227
Query: 478 MKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
D S+ ILI C L+ + F PD +Y +++ G +
Sbjct: 228 -----PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 538 LAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
A +KM + + P T+++++ GL K G E+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 119/219 (54%), Gaps = 4/219 (1%)
Query: 182 LFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGF 241
LFT M G+ P+V+T+N ++ GR + A + M+ + PD TF+ LI F
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ-INPDIVTFSALINAF 90
Query: 242 CKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNP 301
K V + +++M ++ P +TYN+++DG C+ +V A ++ M K +P
Sbjct: 91 VKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG--CSP 148
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
DVV+++TL+ GYC + +D + +F EM +G+ N VTY TLI G C+V +D +++L
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+ G +PD T + ++ G C+ L +A + E +
Sbjct: 209 NEMISC-GVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N +I S+ +G + ++ +L M ++P +VTF++L+ +K + + A+ ++ EML
Sbjct: 48 YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ + P T T+N +I GFCK VDD R M+S C PD+VT++TL++G C+A +V
Sbjct: 108 R-WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 166
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ M ++ + + V+YTTL+ G+C ++D A + EM+ G+ P+ +T++
Sbjct: 167 DNGMEIFCEMHRRG--IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 224
Query: 343 TLIKGLCEVQKIDKIKEVLE 362
++ GLC +++ K +LE
Sbjct: 225 CMLAGLCSKKELRKAFAILE 244
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 129/244 (52%), Gaps = 10/244 (4%)
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH 286
+ D ++ CK+ + F +M P+++TYN ++D C +G+ A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 287 NVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
+++ M++K +NPD+V+++ L+ + ++ + EA +++EM+ + P +TYN++I
Sbjct: 66 QLLRHMIEKQ--INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID 123
Query: 347 GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
G C+ ++D K +L+ ++ G SPD T +TL+NG+C A ++ +++F +M +
Sbjct: 124 GFCKQDRVDDAKRMLD-SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
++ TY+ L+ C +GD + A+ L +E++ G+ P + M LC +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV-------APDYITFHCMLAGLCSKKE 235
Query: 467 TSKA 470
KA
Sbjct: 236 LRKA 239
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 9/252 (3%)
Query: 299 LNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
+ DVV T ++ C N A +F EM +KG+ PN +TYN +I C +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
++L +E +PD T + L+N ++EA +++++M+ W + P + TY+ ++
Sbjct: 66 QLLRHMIE-KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
C + A+++ D + KG +P V + ++ CK + F ++
Sbjct: 125 FCKQDRVDDAKRMLDSMASKG-------CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 479 KRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
+RG + +Y LI G C+ G +A +LL M+ PD + ++ GL K E
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 237
Query: 538 LAYQTLQKMLKS 549
A+ L+ + KS
Sbjct: 238 KAFAILEDLQKS 249
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NS+I + + ++ ++ SM S G SP VVTF++L+ K R + +F EM
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM- 176
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ +T T+ LI GFC+ +D +M S PD +T++ ++ G+C ++
Sbjct: 177 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Query: 283 KTAHNVVKGMVKKSED 298
+ A +++ + +KSED
Sbjct: 237 RKAFAILEDL-QKSED 251
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 113/292 (38%), Gaps = 40/292 (13%)
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M + ++ D + +V LC G+ A+ L+ E+ +KGI P V Y M
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF-------PNVLTYNCMID 53
Query: 460 FLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
C +G+ S A++ R ++ K+ D ++ LI KE E+ MLR + P
Sbjct: 54 SFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP 113
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
+ Y S+IDG ++ A + L M P TF +++ G K +
Sbjct: 114 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Query: 579 VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKL 638
+ R+ + +T T L GF VG D+ L++
Sbjct: 174 CEMH----RRGIVANTVTYTTLI------HGFCQVG---------DLDAAQDLLNEMISC 214
Query: 639 LEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQ 690
A + F + ++ GLC K+L +AF + +L + +H
Sbjct: 215 GVAPDYITF-------------HCMLAGLCSKKELRKAFAILEDLQKSEDHH 253
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 156/335 (46%), Gaps = 8/335 (2%)
Query: 106 ALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
A +FF W Q F H SY L+++I + + + T R FN
Sbjct: 132 AYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTA---RTFN 188
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI S G AGL +++V F K+ P ++N++L LL + + + V+ +ML
Sbjct: 189 LLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED 248
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G +PD T+NIL+ + +D R F +M+ PD TYN L+ + + K
Sbjct: 249 -GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLA 307
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + M K ++P V+ YTTL+ G N++ +EMV G +P+ V Y +
Sbjct: 308 ALTTLNHM--KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I G ++DK KE+ + V G P+ T N+++ G C AG EA + ++M
Sbjct: 366 ITGYVVSGELDKAKEMFR-EMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
P+ YS LV L G A K+ E++KKG
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 27/296 (9%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
+V +++ L+ I + G + DEM+ G TFN+LI + +
Sbjct: 148 TVNSYHLLMKIFAECGEYKAMWRLVDEMVQD-GFPTTARTFNLLICSCGEAGLAKQAVVQ 206
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
F K +FN P +YN +++ + + K V K M++ + +PDV++Y LL
Sbjct: 207 FMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLE--DGFSPDVLTYNILLWTN 264
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI-------KGLCEVQKIDKIKEVLEGALE 366
+D +F+EM G P++ TYN L+ K L + ++ +KEV
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEV------ 318
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVF-EKMMEWKVQPDSATYSVLVRNLCHIGDF 425
G P TL++G AGNL EA K F ++M++ +PD Y+V++ G+
Sbjct: 319 --GIDPSVLHYTTLIDGLSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL 375
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG 481
++A++++ E+ KG L P V Y SM + LC G+ +A +++ RG
Sbjct: 376 DKAKEMFREMTVKGQL-------PNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 108 KFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLI 167
+ F+ + + GF+ + +Y ++L ILG+ A L +K L + +LI
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLH---YTTLI 331
Query: 168 RSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGV 227
RAG + M G P VV + ++ + G + AK +F EM + G
Sbjct: 332 DGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM-TVKGQ 390
Query: 228 APDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHN 287
P+ +T+N +IRG C + ++M S C+P+ V Y+TLV + +AGK+ A
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 288 VVKGMVKKSE--DLNPDVVSY 306
V++ MVKK L P ++ Y
Sbjct: 451 VIREMVKKGHYVHLVPKMMKY 471
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 15/280 (5%)
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
V SY L++ + + +EMV G A T+N LI C + K+ +
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVV 205
Query: 363 GALEVGGFS--PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
++ F+ P + N ++N V+++M+E PD TY++L+
Sbjct: 206 QFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
+G +R ++L+DE+ + DG +P Y + L K K A + +
Sbjct: 266 RLGKMDRFDRLFDEMAR-------DGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEV 318
Query: 481 GTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLL 538
G DP+ Y LI G + G EA L M++ PD Y +I G + GE
Sbjct: 319 GI-DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Query: 539 AYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
A + ++M +P T++S++ GL G E+ L+
Sbjct: 378 AKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLL 417
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 146/356 (41%), Gaps = 45/356 (12%)
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
+Y+ L+K E + + +++ ++ GF T N L+ AG +A+ F K
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQ-DGFPTTARTFNLLICSCGEAGLAKQAVVQFMK 209
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
+ +P +Y+ ++ +L + ++ E +Y ++L +DG +P V Y +
Sbjct: 210 SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML-------EDGFSPDVLTYNILLW 262
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
+ GK + +R F ++ + G F PD
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDG----------------------------------FSPD 288
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
S Y L+ L + +PL A TL M + I P+ + +++ GL + G +
Sbjct: 289 SYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLD 348
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KELIIFLSQSR 636
+++ R +V T + +G DK + + G + ++ +I L +
Sbjct: 349 EMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 408
Query: 637 KLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPL 692
+ EA LL + N + + +T++ L K KLSEA + E+V+KG++ L
Sbjct: 409 EFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHL 464
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 215/491 (43%), Gaps = 24/491 (4%)
Query: 93 GFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR-- 150
G+ +R ++V A K F+ + G N + +++ + R++ R + +
Sbjct: 206 GYCEIRELEV---AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYM 262
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
K+ ++ F +L+ S R G F + ++ +M S+ S +V ++ L R R
Sbjct: 263 KNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM-SLCESVNVEFAYGHMIDSLCRYR 321
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
N + ++ + G+ P ++N +I G CK+ ++ ++ S F P TY
Sbjct: 322 RNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYK 381
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
L++ +C+ A NV++ M++K + Y LRG C+ N E L V M+
Sbjct: 382 LLMESLCKELDTGKARNVLELMLRKEGADRTRI--YNIYLRGLCVMDNPTEILNVLVSML 439
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
+P+ T NT+I GLC++ ++D +VL+ + +PD TLNT+M G G
Sbjct: 440 QGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRA 499
Query: 391 NEALKVFEKMM-EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
EAL V ++M E K++P Y+ ++R L + + A ++ +L K + T
Sbjct: 500 EEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASV-------TA 552
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEAGYELL 508
Y + LC K A++ + ++ G D Y + G C+ G L
Sbjct: 553 DSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL 612
Query: 509 VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
+ P+ Y ++I + G AYQ L++M K+ P T+ IL L
Sbjct: 613 YDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWR-ILDKL--- 668
Query: 569 GYAHESASLVV 579
H+S L V
Sbjct: 669 ---HDSMDLTV 676
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 144/631 (22%), Positives = 256/631 (40%), Gaps = 74/631 (11%)
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLF---------QESVKLFTSMKSVGVSPSVVTFNSLLL 203
+ ++ EDR + R+Y R + E++++ + G P + +S++
Sbjct: 39 DDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIH 98
Query: 204 ILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD 263
L GR + A F L++ G PD T N++I + ++ F +
Sbjct: 99 SLCDAGRFDEAHRRFLLFLAS-GFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKE 157
Query: 264 --PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDE 321
P + YN L++ +C +V AH +V M + PDVV++TTL+ GYC + ++
Sbjct: 158 FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH--LPDVVTFTTLIGGYCEIRELEV 215
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDT----CTL 377
A VF+EM G++PN++T + LI G +++ ++ +++++ E DT
Sbjct: 216 AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAF 275
Query: 378 NTLMNGHCNAGNLNEALKVFEKM----------------------------------MEW 403
L++ C G N+ ++ E M M+
Sbjct: 276 ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKS 335
Query: 404 K-VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST----PLVAAYKSMF 458
K ++P +Y+ ++ LC G RA +L +E GS P YK +
Sbjct: 336 KGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE-----------GSEFEFFPSEYTYKLLM 384
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQDPTS-YKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
+ LCK T KA ++++ D T Y I + G C +LV ML+ +
Sbjct: 385 ESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 518 PDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI-VPTTSTFHSILAGLLKKGYAHESAS 576
PD ++I+GL + G A + L M+ P T ++++ GLL +G A E+
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 577 LV-VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIF---L 632
++ ++ E KI+ V +R LF D+ + G L D I L
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 633 SQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPL 692
+ K+ A K + D + ++GLC+ LS+A Y+L + G +
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNV 624
Query: 693 SCLENLRVALEAGGRSKEVEFLSKRMPNEKQ 723
C + G +E + + M Q
Sbjct: 625 VCYNTVIAECSRSGLKREAYQILEEMRKNGQ 655
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 190/487 (39%), Gaps = 48/487 (9%)
Query: 178 ESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNIL 237
++ KL M++ G P VVTF +L+ + +A VFDEM G+ P++ T ++L
Sbjct: 180 DAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEM-RVCGIRPNSLTLSVL 238
Query: 238 IRGFCKNSMVDDGFRFFQKMSSF-----NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
I GF K V+ G + +++ + + + LVD +CR G + + M
Sbjct: 239 IGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM 298
Query: 293 ---------------------------------VKKSEDLNPDVVSYTTLLRGYCMKQNI 319
+ KS+ L P SY ++ G C
Sbjct: 299 SLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGC 358
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
A + EE + P+ TY L++ LC+ K + VLE L G + T N
Sbjct: 359 MRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEG-ADRTRIYNI 417
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
+ G C N E L V M++ +PD T + ++ LC +G + A K+ D+++
Sbjct: 418 YLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGK 477
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP--TSYKILIIGHCK 497
P ++ L G+ +A ++M P +Y +I G K
Sbjct: 478 F------CAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Query: 498 EGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
+ + + + + DS Y +IDGL + +A + ++ S
Sbjct: 532 LHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFV 591
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLY 617
+ + L GL + GY ++ + L + NV + +GL+ + ++I+ +
Sbjct: 592 YAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMR 651
Query: 618 DNGYMVD 624
NG D
Sbjct: 652 KNGQAPD 658
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 167/365 (45%), Gaps = 28/365 (7%)
Query: 103 PSKALKFFNWLPQM-GFTHNDQSYFLMLEIL-GRARNLNVARNFLFSIKRKSNGTVKLED 160
P AL F +W+ ++ F HN SY ++ +L + V + + IK S +V+ +
Sbjct: 40 PQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIK--SCNSVR-DA 96
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
F R+ + F+ KL +P +N+LL L + G K ++ E
Sbjct: 97 LFVVDFCRTMRKGDSFEIKYKL---------TPKC--YNNLLSSLARFGLVEEMKRLYTE 145
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
ML V+PD YTFN L+ G+CK V + ++ + CDPD TY + + G CR
Sbjct: 146 MLEDL-VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+V A V K M + N VSYT L+ G + IDEAL + +M D PN T
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNE--VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y LI LC + + + + E G PD C L+ C+ L+EA + E M
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSE-SGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
+E + P+ TY+ L++ C + +A L ++L++ ++ P + Y ++
Sbjct: 322 LENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV-------PDLITYNTLIAG 373
Query: 461 LCKNG 465
C +G
Sbjct: 374 QCSSG 378
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 10/252 (3%)
Query: 319 IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
++E ++ EM++ + P+ T+NTL+ G C++ + + K+ + ++ G PD T
Sbjct: 136 VEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ-AGCDPDYFTYT 194
Query: 379 TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
+ + GHC ++ A KVF++M + + +Y+ L+ L FE A+K+ DE L
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL-----FE-AKKI-DEALSL 247
Query: 439 GILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCK 497
+ ++DD P V Y + LC +G+ S+A F+Q+ + G + D Y +LI C
Sbjct: 248 LVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS 307
Query: 498 EGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
T + LL ML P+ Y +LI G +K A L KML+ ++VP T
Sbjct: 308 GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKMLEQNLVPDLIT 366
Query: 558 FHSILAGLLKKG 569
+++++AG G
Sbjct: 367 YNTLIAGQCSSG 378
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 108/238 (45%), Gaps = 5/238 (2%)
Query: 453 AYKSMFQFLCKNGKTSKAERGFRQLMKR-GTQDPTSYKILIIGHCKEGTFEAGYELLVLM 511
Y ++ L + G + +R + ++++ + D ++ L+ G+CK G + + +
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
++ DPD Y S I G ++ E A++ ++M ++ ++ ++ GL +
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 572 HESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD---MKEL 628
E+ SL+V + + NV T + L +G + + + + ++G D L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 629 IIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEK 686
I L EA+ LL LE ++ N +I+G CK K + +A GL +++E+
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQ 358
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 184/383 (48%), Gaps = 19/383 (4%)
Query: 106 ALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
AL W G H+ +Y + ++ILG+A+ + + F+ ++ T+
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNT----VA 159
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++R + AG ++E+V +F + G+ + + N LL L K R A+ V ++ S
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS- 218
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ P+ +TFNI I G+CK + V++ Q+M P +++Y T++ C+ +
Sbjct: 219 -HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ ++ M ++ P+ ++YTT++ ++ +EAL V M G KP+++ YN L
Sbjct: 278 VYEMLSEM--EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I L ++++ + V + G S +T T N+++ +C+ ++A+++ ++M
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 405 V-QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
+ PD TY L+R+ GD KL E++ K L D+ + Y + Q LC+
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST------YTFLIQRLCR 449
Query: 464 NGKTSKAERGFRQLMKRGTQDPT 486
A F +++ +QD T
Sbjct: 450 ANMCEWAYCLFEEMI---SQDIT 469
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 147/329 (44%), Gaps = 9/329 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A+ F+ L + G N +S L+L+ L + + + AR L +K + FN
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK----SHITPNAHTFN 228
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
I + +A +E++ MK G P V+++ +++ ++ + EM +
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P++ T+ ++ ++ R +M C PD + YN L+ + RAG+++
Sbjct: 289 -GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 285 AHNVVKGMVKKSE-DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL-KPNAVTYN 342
A V + V+ E ++ + +Y +++ YC D+A+ + +EM L P+ TY
Sbjct: 348 AERVFR--VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L++ + + ++ ++L+ + S D T L+ C A A +FE+M+
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKL 431
+ P T +L+ + E AE++
Sbjct: 466 QDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 158/365 (43%), Gaps = 23/365 (6%)
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT---LMNGHCNAG 388
KG K ++ Y+ + L + +K D++KE +E TLNT +M AG
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMR-----GDKLVTLNTVAKIMRRFAGAG 169
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
EA+ +F+++ E+ ++ ++ + ++L+ LC E+A + +L K I T
Sbjct: 170 EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHI-------T 221
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILIIGHCKEGTFEAGYEL 507
P + CK + +A +++ G + SY +I +C++ F YE+
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
L M P+S Y +++ L + E A + +M +S P + ++ ++ L +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 568 KGYAHESASLV-VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYD----NGYM 622
G E+ + V + E + N + + + + DK ++ + N +
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 623 VDMKELIIFLSQSRKLLEANKLLLFCLEKHH-NIDIDMCNTVIEGLCKMKKLSEAFGLYY 681
+ L+ + ++E KLL + KHH ++D +I+ LC+ A+ L+
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 682 ELVEK 686
E++ +
Sbjct: 462 EMISQ 466
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Query: 91 TTGFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 150
TT L K +AL+ + + G + Y ++ L RA L A +F ++
Sbjct: 298 TTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER-VFRVEM 356
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGV-SPSVVTFNSLLLILLKRG 209
G V + +NS+I Y ++++L M+S + +P V T+ LL KRG
Sbjct: 357 PELG-VSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
+ EM++ + ++ D T+ LI+ C+ +M + + F++M S + P
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 184/383 (48%), Gaps = 19/383 (4%)
Query: 106 ALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
AL W G H+ +Y + ++ILG+A+ + + F+ ++ T+
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNT----VA 159
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++R + AG ++E+V +F + G+ + + N LL L K R A+ V ++ S
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS- 218
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ P+ +TFNI I G+CK + V++ Q+M P +++Y T++ C+ +
Sbjct: 219 -HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ ++ M ++ P+ ++YTT++ ++ +EAL V M G KP+++ YN L
Sbjct: 278 VYEMLSEM--EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I L ++++ + V + G S +T T N+++ +C+ ++A+++ ++M
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 405 V-QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
+ PD TY L+R+ GD KL E++ K L D+ + Y + Q LC+
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST------YTFLIQRLCR 449
Query: 464 NGKTSKAERGFRQLMKRGTQDPT 486
A F +++ +QD T
Sbjct: 450 ANMCEWAYCLFEEMI---SQDIT 469
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 147/329 (44%), Gaps = 9/329 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A+ F+ L + G N +S L+L+ L + + + AR L +K + FN
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK----SHITPNAHTFN 228
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
I + +A +E++ MK G P V+++ +++ ++ + EM +
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P++ T+ ++ ++ R +M C PD + YN L+ + RAG+++
Sbjct: 289 -GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 285 AHNVVKGMVKKSE-DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL-KPNAVTYN 342
A V + V+ E ++ + +Y +++ YC D+A+ + +EM L P+ TY
Sbjct: 348 AERVFR--VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L++ + + ++ ++L+ + S D T L+ C A A +FE+M+
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKL 431
+ P T +L+ + E AE++
Sbjct: 466 QDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 158/365 (43%), Gaps = 23/365 (6%)
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT---LMNGHCNAG 388
KG K ++ Y+ + L + +K D++KE +E TLNT +M AG
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMR-----GDKLVTLNTVAKIMRRFAGAG 169
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
EA+ +F+++ E+ ++ ++ + ++L+ LC E+A + +L K I T
Sbjct: 170 EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHI-------T 221
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILIIGHCKEGTFEAGYEL 507
P + CK + +A +++ G + SY +I +C++ F YE+
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
L M P+S Y +++ L + E A + +M +S P + ++ ++ L +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 568 KGYAHESASLV-VLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYD----NGYM 622
G E+ + V + E + N + + + + DK ++ + N +
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 623 VDMKELIIFLSQSRKLLEANKLLLFCLEKHH-NIDIDMCNTVIEGLCKMKKLSEAFGLYY 681
+ L+ + ++E KLL + KHH ++D +I+ LC+ A+ L+
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 682 ELVEK 686
E++ +
Sbjct: 462 EMISQ 466
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Query: 91 TTGFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 150
TT L K +AL+ + + G + Y ++ L RA L A +F ++
Sbjct: 298 TTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER-VFRVEM 356
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGV-SPSVVTFNSLLLILLKRG 209
G V + +NS+I Y ++++L M+S + +P V T+ LL KRG
Sbjct: 357 PELG-VSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
+ EM++ + ++ D T+ LI+ C+ +M + + F++M S + P
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 158/335 (47%), Gaps = 7/335 (2%)
Query: 101 KVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLED 160
K+PS+AL F+ +PQ +S +L L + L + L SI K +
Sbjct: 97 KLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG----KPDA 152
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
+N LI ++G F +++KLF M V P+ VTF +L+ L K R A + +
Sbjct: 153 CTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHD 212
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
ML YGV P + + LI+ C+ + F+ + D Y+TL+ + +AG
Sbjct: 213 MLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAG 272
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ +++ M +K PD V+Y L+ G+C++ + + A V +EMV+KGLKP+ ++
Sbjct: 273 RSNEVSMILEEMSEKG--CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
YN ++ ++K ++ + E + G SPDT + + +G C EA + ++M
Sbjct: 331 YNMILGVFFRIKKWEEATYLFED-MPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
+ +P ++ LC G E K+ L
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL 424
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 216/452 (47%), Gaps = 25/452 (5%)
Query: 96 VLRLIKVPSKALKFF------NWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIK 149
+LR PS A+K F + P+ F ++ Y +++ LG ++ + L +K
Sbjct: 15 LLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLK 74
Query: 150 RKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
++ + + F ++I +GR L ++ +F M +V + NSLL LLK G
Sbjct: 75 --TDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCG 132
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
K + +G PD T+NILI G ++ DD + F +M P VT+
Sbjct: 133 ELEKMKERLSS-IDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
TL+ G+C+ +VK A + M+K + P V Y +L++ C + A + +E
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLK-VYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
+ +K +A Y+TLI L + + +++ +LE E G PDT T N L+NG C +
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSE-KGCKPDTVTYNVLINGFCVEND 308
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
A +V ++M+E ++PD +Y++++ I +E A L++++ ++ G +P
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR-------GCSP 361
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKI--LIIGHCKEGTFEAGYEL 507
+Y+ +F LC+ + +A +++ +G + P ++ + C+ G E
Sbjct: 362 DTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK-PRRDRLEGFLQKLCESGKLEI-LSK 419
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
++ L R D++++ +I + + EP+++
Sbjct: 420 VISSLHRGIAGDADVWSVMIPTMCK--EPVIS 449
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 173/402 (43%), Gaps = 25/402 (6%)
Query: 179 SVKLFTSMKSVGVSPSVVTFNSLL---LILLKRGRTNMAKSVFDEM-------LSTYGVA 228
++KLF + +P SLL +I+ K G + M FDE+ + +
Sbjct: 25 AMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKM----FDELDQVLLHLKTDTRIV 80
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
P F +I F + + F +M + C + + N+L+ + + G+++
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
+ + E PD +Y L+ G D+AL +F+EMV K +KP VT+ TLI GL
Sbjct: 141 LSSI---DEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGL 197
Query: 349 CEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
C+ ++ + ++ L+V G P +L+ C G L+ A K+ ++ E K++ D
Sbjct: 198 CKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVD 257
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTS 468
+A YS L+ +L G + +E+ +K G P Y + C +
Sbjct: 258 AAIYSTLISSLIKAGRSNEVSMILEEMSEK-------GCKPDTVTYNVLINGFCVENDSE 310
Query: 469 KAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
A R +++++G + D SY +++ + +E L M RR PD+ Y+ +
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVF 370
Query: 528 DGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
DGL + + A L +ML P L L + G
Sbjct: 371 DGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESG 412
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 135/332 (40%), Gaps = 54/332 (16%)
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
+PD+ TY++L+ G F+ A KL+DE++KK + P + ++ LCK+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKV-------KPTGVTFGTLIHGLCKDS 201
Query: 466 KTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
+ +A + ++K PT Y LI C+ G ++L D+ IY
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIY 261
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG----------------LLK 567
+LI L++ G L++M + P T T++ ++ G +++
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 568 KGYAHESASLVVL---------------LLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
KG + S ++ L E R+ + T + R++F F
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 613 VGLLYDN----GYMVDMKELIIFLSQSRKLLEANKL-----LLFCLEKHHNIDIDMCNTV 663
++ D GY L FL +KL E+ KL ++ L + D D+ + +
Sbjct: 382 AAVILDEMLFKGYKPRRDRLEGFL---QKLCESGKLEILSKVISSLHRGIAGDADVWSVM 438
Query: 664 IEGLCKMKKLSEAFGLYYELVEKGNHQPLSCL 695
I +CK +S++ L V++ PLS +
Sbjct: 439 IPTMCKEPVISDSIDLLLNTVKEDG--PLSAM 468
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 215/469 (45%), Gaps = 57/469 (12%)
Query: 105 KALKFFNWLPQMG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF- 162
++L +W+ + +T + +Y ++L + RA+ ++A +++++ DR+
Sbjct: 137 RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP----DRYT 192
Query: 163 FNSLIRSYGRAGLFQ-----------------------------------ESVKLFTSMK 187
+++LI S+G+ G+F +++ +F+ +K
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 188 SVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV 247
G++P +V +NS++ + K A+ + EM + GV P+T +++ L+ + +N
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEM-NEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
+ F +M NC D+ T N ++D + VK A + + K D+ P+VVSY
Sbjct: 312 LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM--DIEPNVVSYN 369
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
T+LR Y + EA+ +F M K ++ N VTYNT+IK + + +K +++ ++
Sbjct: 370 TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ-EMQS 428
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
G P+ T +T+++ AG L+ A +F+K+ V+ D Y ++ +G
Sbjct: 429 RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGH 488
Query: 428 AEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPT 486
A++L EL + R+ T L K G+T +A FRQ + G +D +
Sbjct: 489 AKRLLHELKLPDNIPRETAIT-----------ILAKAGRTEEATWVFRQAFESGEVKDIS 537
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
+ +I + + + E+ M + PDS + +++ ++ E
Sbjct: 538 VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQRE 586
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 187/439 (42%), Gaps = 55/439 (12%)
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLFTSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
+L RF SL+ R +Q S+ L + + +PSV +N +L +L+ + ++A
Sbjct: 119 QLSIRFMVSLL---SRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAH 175
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
+FDEM +APD YT++ LI F K M D + QKM D+V Y+ L++
Sbjct: 176 GLFDEMRQR-ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL 234
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
R A ++ + K + PD+V+Y +++ Y + EA ++ +EM + G+
Sbjct: 235 SRRLCDYSKAISIFSRL--KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVL 292
Query: 336 PNAVTYNTLIKGLCEVQK--------------------------------IDKIKEV--L 361
PN V+Y+TL+ E K +D +KE L
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
+L P+ + NT++ + A EA+ +F M ++ + TY+ +++
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 422 IGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG 481
+ E+A L E+ +GI P Y ++ K GK +A F++L G
Sbjct: 413 TMEHEKATNLVQEMQSRGI-------EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 482 TQ-DPTSYKILIIGHCKEGTFEAGYELL-VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
+ D Y+ +I+ + + G LL L L PD+ ++ I L + G A
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL-----PDNIPRETAITILAKAGRTEEA 520
Query: 540 YQTLQKMLKSSIVPTTSTF 558
++ +S V S F
Sbjct: 521 TWVFRQAFESGEVKDISVF 539
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 162/363 (44%), Gaps = 68/363 (18%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NS+I YG+A LF+E+ L M GV P+ V++++LL + ++ + A SVF EM
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM- 321
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
A D T NI+I + + MV + R F + + +P++V+YNT++ A
Sbjct: 322 KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF 381
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A ++ + M +K D+ +VV+Y T+++ Y ++A + +EM +G++PNA+TY+
Sbjct: 382 GEAIHLFRLMQRK--DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 439
Query: 343 TLIKGLCEVQKID--------------KIKEVLEGALEVG-------GFS---------P 372
T+I + K+D +I +VL + V G + P
Sbjct: 440 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP 499
Query: 373 DTCTLNTLMNGHCNAGNLNEA-----------------------------------LKVF 397
D T + AG EA ++VF
Sbjct: 500 DNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVF 559
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
EKM PDS ++++ +FE+A+ +Y E+ ++G + D+ +++ Y S
Sbjct: 560 EKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSK 619
Query: 458 FQF 460
F
Sbjct: 620 KDF 622
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 204/467 (43%), Gaps = 26/467 (5%)
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
P + +N+++R + D F +M PD TY+TL+ + G +A +
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 289 VKGMVKKSEDLNPDVVSYTTLL---RGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ M + + ++ D+V Y+ L+ R C + +A+ +F + G+ P+ V YN++I
Sbjct: 213 LQKM--EQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
+ K+ + +L + G P+T + +TL++ + EAL VF +M E
Sbjct: 268 NVYGKA-KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
D T ++++ + + A++L+ L K I P V +Y ++ + +
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI-------EPNVVSYNTILRVYGEAE 379
Query: 466 KTSKAERGFRQLMKRG--TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
+A FR LM+R Q+ +Y +I + K E L+ M R +P++ Y
Sbjct: 380 LFGEAIHLFR-LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITY 438
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
++I + G+ A QK+ S + + +++ + G + LL E
Sbjct: 439 STIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR---LLHE 495
Query: 584 GKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE---LIIFLSQSRKLLE 640
K+ N+ T + +L G ++ + +++G + D+ +I S++++ +
Sbjct: 496 LKLPDNIPRET-AITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVN 554
Query: 641 ANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
++ + D ++ V+ K ++ +A +Y E+ E+G
Sbjct: 555 VIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 169/444 (38%), Gaps = 81/444 (18%)
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI------- 345
V + P V +Y +LR + D A +F+EM + L P+ TY+TLI
Sbjct: 145 VHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEG 204
Query: 346 ---KGLCEVQKIDKIK---------EVLE---------------GALEVGGFSPDTCTLN 378
L +QK+++ + ++E L+ G +PD N
Sbjct: 205 MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYN 264
Query: 379 TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
+++N + A EA + ++M E V P++ +YS L+ F A ++ E+ +
Sbjct: 265 SMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV 324
Query: 439 GILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCK 497
L ++ Y + +A+R F L K + + SY ++ + +
Sbjct: 325 NCALDLTTCNIMIDVYGQL-------DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE 377
Query: 498 EGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
F L LM R++ + + Y ++I + E A +Q+M I P T
Sbjct: 378 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAIT 437
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLY 617
+ +I++ K G +A+L LR G I +LY
Sbjct: 438 YSTIISIWGKAGKLDRAATLF------------------------QKLRSSGVEIDQVLY 473
Query: 618 DNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAF 677
M+ E + + +++LL KL NI + T I L K + EA
Sbjct: 474 QT--MIVAYERVGLMGHAKRLLHELKL-------PDNIPRE---TAITILAKAGRTEEAT 521
Query: 678 GLYYELVEKGNHQPLS---CLENL 698
++ + E G + +S C+ NL
Sbjct: 522 WVFRQAFESGEVKDISVFGCMINL 545
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 174/393 (44%), Gaps = 43/393 (10%)
Query: 106 ALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
AL F W Q GF H +Y ++E LG+ + + + + +K K L F
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK----LLSKETFA 166
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+ R Y RA +E++ F M+ G FN +L L K A+ VFD+M
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM-KK 225
Query: 225 YGVAPDTYTFNILIRGFCKN-----------SMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
PD ++ IL+ G+ + M D+GF +PD+V Y ++
Sbjct: 226 KRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGF-----------EPDVVAYGIII 274
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
+ C+A K + A M +++ +P + + +L+ G ++ +++AL FE G
Sbjct: 275 NAHCKAKKYEEAIRFFNEMEQRNCKPSPHI--FCSLINGLGSEKKLNDALEFFERSKSSG 332
Query: 334 LKPNAVTYNTLIKGLCEVQKI-DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
A TYN L+ C Q++ D K V E + + G P+ T + +++ E
Sbjct: 333 FPLEAPTYNALVGAYCWSQRMEDAYKTVDE--MRLKGVGPNARTYDIILHHLIRMQRSKE 390
Query: 393 ALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVA 452
A +V++ M +P +TY ++VR C+ + A K++DE+ KG+L P +
Sbjct: 391 AYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL-------PGMH 440
Query: 453 AYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP 485
+ S+ LC K +A F +++ G + P
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPP 473
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 185/430 (43%), Gaps = 19/430 (4%)
Query: 152 SNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT 211
+ +VKL +++ AG+ SV + + G + +N+L+ L K +
Sbjct: 86 NEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQK-GFKHTTSNYNALIESLGKIKQF 144
Query: 212 NMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNT 271
+ S+ D+M + ++ +T F ++ R + + V + F KM F + +N
Sbjct: 145 KLIWSLVDDMKAKKLLSKET--FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNR 202
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
++D + ++ V A V M KK PD+ SYT LL G+ + N+ V EM D
Sbjct: 203 MLDTLSKSRNVGDAQKVFDKMKKKR--FEPDIKSYTILLEGWGQELNLLRVDEVNREMKD 260
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
+G +P+ V Y +I C+ +K ++ +E P +L+NG + LN
Sbjct: 261 EGFEPDVVAYGIIINAHCKAKKYEEAIRFF-NEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
+AL+ FE+ ++ TY+ LV C E A K DE+ KG+ P
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGV-------GPNA 372
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLV 509
Y + L + ++ +A ++ + + +PT +Y+I++ C + + ++
Sbjct: 373 RTYDIILHHLIRMQRSKEAYEVYQTM----SCEPTVSTYEIMVRMFCNKERLDMAIKIWD 428
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
M + P ++ SLI L + + A + +ML I P F + LL +G
Sbjct: 429 EMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEG 488
Query: 570 YAHESASLVV 579
+ LVV
Sbjct: 489 RKDKVTDLVV 498
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 9/245 (3%)
Query: 117 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLF 176
GF + +Y +++ +A+ A F +++++ K F SLI G
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN---CKPSPHIFCSLINGLGSEKKL 318
Query: 177 QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
++++ F KS G T+N+L+ R A DEM GV P+ T++I
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM-RLKGVGPNARTYDI 377
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
++ + + + +Q MS C+P + TY +V C ++ A + M K
Sbjct: 378 ILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEM--KG 432
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
+ + P + +++L+ C + +DEA F EM+D G++P ++ L + L + + DK
Sbjct: 433 KGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDK 492
Query: 357 IKEVL 361
+ +++
Sbjct: 493 VTDLV 497
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 203/465 (43%), Gaps = 51/465 (10%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
++L + + LI + + ++ +LF M+ +G++ + ++ L+ L K MA
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMAL 338
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
S++ E+ + G+ PD L+ F + S + + + ++ Y +L +G
Sbjct: 339 SLYLEIKRS-GIPPDRGILGKLLCSFSEESELSRITEVI--IGDIDKKSVMLLYKSLFEG 395
Query: 276 VCRAGKVKTAHNVVKGM------------VKKSEDLN----PDVVSYTTLLRGYCMKQNI 319
R V A++ ++ + VK +D N PD S + ++ +
Sbjct: 396 FIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKV 455
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
D A+ + ++V GL P + YN +I+G+C+ + ++ ++L G ++ G P TLN
Sbjct: 456 DMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL-GEMKDAGVEPSQFTLNC 514
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
+ + AL + +KM + +P + LV+ LC G A K D++ +G
Sbjct: 515 IYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEG 574
Query: 440 IL-------------------------LRD---DGSTPLVAAYKSMFQFLCKNGKTSKAE 471
L RD +G P V AY + + LCK +T +A+
Sbjct: 575 FLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEAD 634
Query: 472 RGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
F +++ +G + PT +Y +I G CKEG + G +V M +PD Y SLI G
Sbjct: 635 ILFNEMVSKGLK-PTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHG 693
Query: 530 LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
L G P A +M P TF +++ GL K G++ E+
Sbjct: 694 LCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEA 738
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 200/464 (43%), Gaps = 29/464 (6%)
Query: 95 QVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNG 154
++++L+K +KA+ LP + S +++ L +A +++A L I + NG
Sbjct: 423 EIVKLLKDHNKAI-----LP------DSDSLSIVINCLVKANKVDMAVTLLHDIVQ--NG 469
Query: 155 TVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMA 214
+ +N++I + G +ES+KL MK GV PS T N + L +R A
Sbjct: 470 LIP-GPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 215 KSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVD 274
+ +M YG P L++ C+N D ++ ++ +V +D
Sbjct: 529 LDLLKKM-RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 275 GVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL 334
G+ + V + + + PDV++Y L++ C EA ++F EMV KGL
Sbjct: 588 GLIKNEGVDRGLELFRDICANGH--CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 335 KPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEAL 394
KP TYN++I G C+ +ID+ + E +PD T +L++G C +G +EA+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE-DEKNPDVITYTSLIHGLCASGRPSEAI 704
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAY 454
+ +M P+ T+ L++ LC G A + E+ +K + P A Y
Sbjct: 705 FRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEM-------EPDSAVY 757
Query: 455 KSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
S+ + + FR+++ +G + + ++ + Y+ L +
Sbjct: 758 LSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSDVDYAYKF----LSK 813
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTF 558
DP + + +I G P + +ML+ ++P T+
Sbjct: 814 LSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTY 857
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 204/494 (41%), Gaps = 93/494 (18%)
Query: 180 VKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIR 239
++LF + + G P V+ ++ L+ L K RT A +F+EM+S G+ P T+N +I
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK-GLKPTVATYNSMID 657
Query: 240 GFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDL 299
G+CK +D G +M +PD++TY +L+ G+C +G+ A + + K +D
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA--IFRWNEMKGKDC 715
Query: 300 NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKE 359
P+ +++ L++G C EALV F EM +K ++P++ Y +L+ + I+
Sbjct: 716 YPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFG 775
Query: 360 VLEGALEVGGF-----------------------------SPDTCTLNTLMNGHCNAGNL 390
+ + G F P N ++ G N+ N
Sbjct: 776 IFREMVHKGRFPVSVDRNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNP 835
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRN-------------------------------L 419
+++ V+ +M+ + + PD TY L+++ L
Sbjct: 836 EKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTL 895
Query: 420 CHI-GDFE---RAEKLYDELLKKGI--------------------LLRDDGSTPLVAAYK 455
H+ G F A KL+DE+ K + L+ D+ S V +
Sbjct: 896 IHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWS 955
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKIL-IIGHCKE-GTFEAGYELLVLMLR 513
SM K G+ +KA F Q+M+ G+ ++ +I C G G + +L
Sbjct: 956 SMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILD 1015
Query: 514 RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTS-TFHSILAGLLKKGYAH 572
+ + SLID + G A+ ++S+ T + +++I+ GL G+
Sbjct: 1016 VHLPLTVILQTSLIDMYAKCGSIGDAWSVF---YRASVKETDALMWNAIIGGLASHGFIR 1072
Query: 573 ESASLVVLLLEGKI 586
ES L + E KI
Sbjct: 1073 ESLQLFHKMRESKI 1086
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 136/631 (21%), Positives = 237/631 (37%), Gaps = 133/631 (21%)
Query: 96 VLRLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNG 154
VL K A FFNW Q G+ ++ +Y M IL RAR + + + N
Sbjct: 79 VLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVL---NS 135
Query: 155 TVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVS-PSVVTFNSLLLILLKR----- 208
+ F IR G AGL E+ +F ++ +G+ P+ T+N LL + K
Sbjct: 136 RCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSV 195
Query: 209 --------------------------------GRTNMAKSVFDEMLS------------- 223
G++ A SVF+E+LS
Sbjct: 196 ELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILV 255
Query: 224 ----TYGVAPDTY----------------TFNILIRGFCKNSMVDDGFRFFQKMSSFNCD 263
+G + T+ +LI GF K S +D F+ F+KM +
Sbjct: 256 VSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMN 315
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVV-----------KGMVKK--------------SED 298
DI Y+ L+ G+C+ ++ A ++ +G++ K +E
Sbjct: 316 ADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEV 375
Query: 299 LNPDV------VSYTTLLRGYCMKQNIDEALVVFEEMV------------------DKGL 334
+ D+ + Y +L G+ + EA + ++ +K +
Sbjct: 376 IIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAI 435
Query: 335 KPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEAL 394
P++ + + +I L + K+D +L ++ G P N ++ G C G E+L
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQ-NGLIPGPMMYNNIIEGMCKEGRSEESL 494
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAY 454
K+ +M + V+P T + + L DF A +LLKK +R G P +
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGAL----DLLKK---MRFYGFEPWIKHT 547
Query: 455 KSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLR 513
+ + LC+NG+ A + + G + I G K + G EL +
Sbjct: 548 TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICA 607
Query: 514 RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHE 573
PD Y LI L + + A +M+ + PT +T++S++ G K+G
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 574 SASLVVLLLEGKIRQNVTLSTHTVRLLFSNG 604
S +V + E + +V T + L ++G
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASG 698
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 141/652 (21%), Positives = 256/652 (39%), Gaps = 101/652 (15%)
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLF--TSMKSVGVSPSVVTFNSLLLILLKRGRTN-- 212
+L + +++ + R GL LF + K G + +N++ IL R R N
Sbjct: 70 ELNTKVVETVLNGFKRWGL----AYLFFNWASKQEGYRNDMYAYNAMASIL-SRARQNAS 124
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFN-CDPDIVTYNT 271
+ V D + S ++P + F IR +VD+ F ++ C P+ TYN
Sbjct: 125 LKALVVDVLNSRCFMSPGAFGF--FIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNC 182
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSED--LNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
L++ + ++ ++ +V+ +K+ D + D + T +L+ YC + AL VF E+
Sbjct: 183 LLEAISKSNS--SSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEI 240
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
+ +G ++ L+ C+ ++DK E++E LE + T L++G
Sbjct: 241 LSRGWLDEHIS-TILVVSFCKWGQVDKAFELIE-MLEERDIRLNYKTYCVLIHGFVKESR 298
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI--------- 440
+++A ++FEKM + D A Y VL+ LC D E A LY E+ + GI
Sbjct: 299 IDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGK 358
Query: 441 -----------------LLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ 483
++ D ++ YKS+F+ +N +A + LM
Sbjct: 359 LLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYES 418
Query: 484 D-----------------PTSYKILIIGHC--KEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
D P S + I+ +C K + LL +++ P +Y
Sbjct: 419 DGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYN 478
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA------------GLLKKG--Y 570
++I+G+ ++G + + L +M + + P+ T + I LLKK Y
Sbjct: 479 NIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFY 538
Query: 571 AHESASLVVLLLEGKIRQN---------------------VTLSTHTVRLLFSNGLRDKG 609
E L K+ +N + ST + L N D+G
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 610 FRIVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEG 666
+ + NG+ D+ LI L ++ + +EA+ L + K + N++I+G
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 667 LCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRM 718
CK ++ + E + + +L L A GR E F M
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 157/376 (41%), Gaps = 60/376 (15%)
Query: 138 LNVARNFLFSIKRKSNGTV------KLED---RFFNSLIRSYGRAGLFQESVKLFTSMKS 188
++V RN++ ++ S+ KL D +N +IR + + ++S+ ++ M
Sbjct: 788 VSVDRNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLR 847
Query: 189 VGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVD 248
G+ P +T+ L+ + + S+ ++ + G+ D + N LI +
Sbjct: 848 FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS-GLEWDLFICNTLIHMYGSFRDQA 906
Query: 249 DGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTT 308
+ F +M N +VT+N+++D ++G V +A V M ++ DVV++++
Sbjct: 907 SARKLFDEMPHKN----LVTWNSILDAYAKSGDVVSARLVFDEMSER------DVVTWSS 956
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGL-KPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
++ GY + ++AL +F++M+ G K N VT ++I + +++ K V L+V
Sbjct: 957 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV 1016
Query: 368 -------------------GGFS-------------PDTCTLNTLMNGHCNAGNLNEALK 395
G D N ++ G + G + E+L+
Sbjct: 1017 HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQ 1076
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
+F KM E K+ PD T+ L+ H G + A + L++ G+ P Y
Sbjct: 1077 LFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKS-------LKESGAEPKSEHYA 1129
Query: 456 SMFQFLCKNGKTSKAE 471
M L + G A
Sbjct: 1130 CMVDVLSRAGLVKDAH 1145
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 15/281 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPS-VVTFNSLLLILLKRGRTNMAKSVFDEM 221
++S+I Y + G + +++++F M +G S + VT S++ G N K+V +
Sbjct: 954 WSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYI 1013
Query: 222 LSTYGVAPDTYTFNI-LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
L + P T LI + K + D + F + S + D + +N ++ G+ G
Sbjct: 1014 LDVH--LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK--ETDALMWNAIIGGLASHG 1069
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
++ + + M + ++PD +++ LL + EA F+ + + G +P +
Sbjct: 1070 FIRESLQLFHKM--RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEH 1127
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y ++ L + +K+ + E+ P L L+NG N GNL A V +K+
Sbjct: 1128 YACMVDVL---SRAGLVKDAHDFISEMP-IKPTGSMLGALLNGCINHGNLELAETVGKKL 1183
Query: 401 MEWKVQPDSATYSVLVRNLCHIG-DFERAEKLYDELLKKGI 440
+E +QP + V + N+ I F A + + + KKG+
Sbjct: 1184 IE--LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGV 1222
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 41/384 (10%)
Query: 98 RLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTV 156
RL P F W + GFT + + ++ L +AR +A + +F R G+
Sbjct: 110 RLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSN 169
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILL----KRGRTN 212
+ F LIR Y RAG+ Q++++ F +S T LL +LL K G
Sbjct: 170 LVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVR 229
Query: 213 MAKSVFDEMLSTY--GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
A + + T P FNIL+ G+ ++ + + +++M + N P +VTY
Sbjct: 230 EASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYG 289
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLN------------------------------ 300
TL++G CR +V+ A V++ M ++N
Sbjct: 290 TLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVC 349
Query: 301 ---PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI 357
P +V+Y +L++ +C ++ A + + M+ +G+ P TYN K + K ++
Sbjct: 350 ESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEG 409
Query: 358 KEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
+ +E G SPD T + ++ C G L+ A++V ++M + PD T ++L+
Sbjct: 410 MNLYFKLIE-AGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIH 468
Query: 418 NLCHIGDFERAEKLYDELLKKGIL 441
LC + E A + +D +++GI+
Sbjct: 469 LLCRLEMLEEAFEEFDNAVRRGII 492
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 24/326 (7%)
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT----YSVLVRNLCHIGDFERAEKL 431
T L+ + AG + +A++ FE ++ SAT VL+ LC G R +
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHV-REASM 233
Query: 432 YDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYK 489
Y E + + D P V + + ++ K +AE+ + + MK PT +Y
Sbjct: 234 YLERIGGTM---DSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEE-MKAMNVKPTVVTYG 289
Query: 490 ILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS 549
LI G+C+ + E+L M + + ++ +IDGL + G A +++
Sbjct: 290 TLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVC 349
Query: 550 SIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG 609
PT T++S++ K G ++ ++ +++ + T H + + ++G
Sbjct: 350 ESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEG 409
Query: 610 FRIVGLLYDNGYMVD--MKELII-FLSQSRKL---LEANKLLLFCLEKHHNIDIDMCNT- 662
+ L + G+ D LI+ L + KL ++ NK + K+ ID D+ T
Sbjct: 410 MNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEM-----KNRGIDPDLLTTT 464
Query: 663 -VIEGLCKMKKLSEAFGLYYELVEKG 687
+I LC+++ L EAF + V +G
Sbjct: 465 MLIHLLCRLEMLEEAFEEFDNAVRRG 490
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 218/494 (44%), Gaps = 43/494 (8%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVA-RNFLFSIKRKSNGTVKLEDRF 162
++A F+ + G+ + Y +++ + N+ +A R +L ++R + +L+
Sbjct: 254 AEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVER----SFELDPCI 309
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN+LI + + G+ + +F+ M GV +V T++ ++ K G + A +F
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNT 369
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ ++ + + + LI GF K +D +M PD +TY L+ + + ++
Sbjct: 370 GSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHEL 429
Query: 283 KTAHNVVKGMVKKSEDLNPDV---------------------------VSYTTLLRGYCM 315
K A +++ ++ +NP V V + C
Sbjct: 430 KYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCS 489
Query: 316 KQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTC 375
++N AL E+MV+ G P +YN++IK L + I+ + ++ E+ F PD
Sbjct: 490 QRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELD-FVPDVD 548
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
T ++N C + + A + + M E ++P A YS ++ +L G AE+ + ++
Sbjct: 549 TYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM 608
Query: 436 LKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS--YKILII 493
L+ GI P AY M +NG+ +A +++K + P+S Y +LI
Sbjct: 609 LESGI-------QPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR-PSSFTYTVLIS 660
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
G K G E G + L ML P+ +Y +LI L+KG+ ++ M ++ I
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKH 720
Query: 554 TTSTFHSILAGLLK 567
+ ++L+GL +
Sbjct: 721 DHIAYITLLSGLWR 734
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 175/424 (41%), Gaps = 38/424 (8%)
Query: 186 MKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNS 245
M ++G +P ++NS++ L + S+ + ++ PD T+ I++ CK +
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVN-IIQELDFVPDVDTYLIVVNELCKKN 561
Query: 246 MVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVS 305
D F M P + Y++++ + + G+V A M++ + PD ++
Sbjct: 562 DRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESG--IQPDEIA 619
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
Y ++ Y IDEA + EE+V L+P++ TY LI G ++ ++K + L+ L
Sbjct: 620 YMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKML 679
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
E G SP+ L+ G+ + +F M E ++ D Y L+ L
Sbjct: 680 E-DGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMAR 738
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF------------------------- 460
++ ++ E K+ +L R + PLV+ S+ +
Sbjct: 739 KKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHN 798
Query: 461 -----LCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
C G+ +A + K G + +Y IL+ H + G E+ +L
Sbjct: 799 TIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GT 855
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
N +PD +Y +L+ GL PL A + +M KS I P ++ +L L E+
Sbjct: 856 NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEA 915
Query: 575 ASLV 578
+V
Sbjct: 916 VKVV 919
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 202/501 (40%), Gaps = 38/501 (7%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+ SL + + G E+ LF M+ G V + L+ K MA ++ M
Sbjct: 239 LYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRM 298
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ D FN LI GF K M+D G F +M ++ TY+ ++ C+ G
Sbjct: 299 VER-SFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
V A + SED++ +V YT L+ G+ K +D+A+ + M+D G+ P+ +TY
Sbjct: 358 VDYALRLFVNNTG-SEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVG-GFSPD--------------------------- 373
L+K L + ++ +L+ L+ G G +P
Sbjct: 417 FVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLA 476
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
L + C+ N AL EKM+ P +Y+ +++ L F+ E + +
Sbjct: 477 AVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL-----FQ--ENIIE 529
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILII 493
+L ++++ P V Y + LCK A + + G + + II
Sbjct: 530 DLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Query: 494 GHC-KEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
G K+G E ML PD Y +I+ + G A + +++++K +
Sbjct: 590 GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
P++ T+ +++G +K G + + +LE + NV L T + G F +
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Query: 613 VGLLYDNGYMVDMKELIIFLS 633
GL+ +N D I LS
Sbjct: 710 FGLMGENDIKHDHIAYITLLS 730
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 158/392 (40%), Gaps = 86/392 (21%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
++S+I S G+ G E+ + F M G+ P + + ++ + GR + A + +E+
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIV-------------- 267
+ + + P ++T+ +LI GF K M++ G ++ KM P++V
Sbjct: 644 VKHF-LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGD 702
Query: 268 ---------------------TYNTLVDGVCRA-------------GKVKTAHNVVK--- 290
Y TL+ G+ RA GK K +++
Sbjct: 703 FKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKP 762
Query: 291 ---------------------GMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
G VKKS + P++ + T++ GYC +DEA E M
Sbjct: 763 LVSIPSSLGNYGSKSFAMEVIGKVKKS--IIPNLYLHNTIITGYCAAGRLDEAYNHLESM 820
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
+G+ PN VTY L+K E I+ ++ EG PD +TL+ G C+
Sbjct: 821 QKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT----NCEPDQVMYSTLLKGLCDFKR 876
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
+AL + +M + + P+ +Y L++ LC+ A K+ ++ I R T
Sbjct: 877 PLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTW 936
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG 481
L+ LC+ K +A F +++ G
Sbjct: 937 LI-------YILCEEKKLREARALFAIMVQSG 961
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/541 (19%), Positives = 211/541 (39%), Gaps = 46/541 (8%)
Query: 190 GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
G+ + +L+ L + G+ +A++ +++ + G+ PD+ + ++ K D+
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
++ + P + + +VD +C + A + + + ++ L + L
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLW--LWCCKRL 207
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVT-YNTLIKGLCEVQKIDKIKEVLEGALEVG 368
+G C +++EA+ + + + P V Y +L C+ + E L +EV
Sbjct: 208 FKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCK-RGCAAEAEALFDHMEVD 266
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G+ D LM +C N+ A++++ +M+E + D ++ L+ +G ++
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-- 486
++ +++KKG+ V Y M CK G A R F + G++D +
Sbjct: 327 RVMFSQMIKKGV-------QSNVFTYHIMIGSYCKEGNVDYALRLF--VNNTGSEDISRN 377
Query: 487 --SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
Y LI G K+G + +LL+ ML PD Y L+ L + E A LQ
Sbjct: 378 VHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQ 437
Query: 545 KMLKSS--IVPTT--------STFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
+L + I P S+L + +K + L V+ ++N +
Sbjct: 438 SILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAAL 497
Query: 595 HTVRLLFSNGLRDKGFR---IVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEK 651
+ + + G F ++ L+ + D+ L+ + E
Sbjct: 498 SRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQ----------------EL 541
Query: 652 HHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEV 711
D+D V+ LCK AF + + E G ++ ++ +L GR E
Sbjct: 542 DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 712 E 712
E
Sbjct: 602 E 602
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 205/458 (44%), Gaps = 26/458 (5%)
Query: 105 KALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF- 162
+AL FF+W H +SY L + IL +AR L AR + S S L D
Sbjct: 95 QALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLL 154
Query: 163 ------------FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
F+ L++ Y + + +F + G + SV+T N+L+ K
Sbjct: 155 DTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKI 214
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
++ +++ + + P+ T I+I+ CK + + ++ C P ++
Sbjct: 215 DDLVWRIYECAIDK-RIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNT 273
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
+LV V +++ + +++K ++ K ++ D + Y+ ++ + ++ A VF+EM+
Sbjct: 274 SLVFRVLEEMRIEESMSLLKRLLMK--NMVVDTIGYSIVVYAKAKEGDLVSARKVFDEML 331
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
+G N+ Y ++ CE + + + +L +E G SP T N L+ G G
Sbjct: 332 QRGFSANSFVYTVFVRVCCEKGDVKEAERLL-SEMEESGVSPYDETFNCLIGGFARFGWE 390
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+ L+ E M+ + P + ++ +V+++ I + RA +E+L K I D G P
Sbjct: 391 EKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRA----NEILTKSI---DKGFVPD 443
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS-YKILIIGHCKEGTFEAGYELLV 509
Y + + + +A + F ++ R ++ LI+G C G EAG + L
Sbjct: 444 EHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLK 503
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
+M +R +P+++IY +LI + G+ A + +M+
Sbjct: 504 IMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 153/353 (43%), Gaps = 12/353 (3%)
Query: 219 DEMLSTYGVAPDT-YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVC 277
D +L TY ++ T F++L++ + K ++ GF F+++ ++T NTL+
Sbjct: 151 DSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSS 210
Query: 278 RAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPN 337
++ + + + K + P+ ++ +++ C + + E + + + + K P+
Sbjct: 211 KSKIDDLVWRIYECAIDKR--IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPS 268
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
+ +L+ + E +I++ +L+ L + DT + ++ G+L A KVF
Sbjct: 269 VIVNTSLVFRVLEEMRIEESMSLLKRLL-MKNMVVDTIGYSIVVYAKAKEGDLVSARKVF 327
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
++M++ +S Y+V VR C GD + AE+L E+ + G+ D+ L+ +
Sbjct: 328 DEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGF--- 384
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQDPTS-YKILIIGHCKEGTFEAGYELLVLMLRRNF 516
+ G K ++ RG S + ++ K E+L + + F
Sbjct: 385 ----ARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGF 440
Query: 517 DPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
PD Y LI G ++ + A + +M + P F S++ GL G
Sbjct: 441 VPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCG 493
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 143/361 (39%), Gaps = 50/361 (13%)
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
GF+ TLNTL++ + + +++E ++ ++ P+ T ++++ LC G +
Sbjct: 194 GFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEV 253
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSY 488
L D + K L +T LV F+ L + R LMK D Y
Sbjct: 254 VDLLDRICGKRCLPSVIVNTSLV------FRVLEEMRIEESMSLLKRLLMKNMVVDTIGY 307
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
I++ KEG + ++ ML+R F +S +Y + +KG+ A + L +M +
Sbjct: 308 SIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEE 367
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDK 608
S + P TF+ ++ G + G+ +K
Sbjct: 368 SGVSPYDETFNCLIGGFARFGW-----------------------------------EEK 392
Query: 609 GFRIVGLLYDNGYMVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIE 665
G ++ G M E++ +S+ + AN++L ++K D + +I
Sbjct: 393 GLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIR 452
Query: 666 GLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGR----SKEVEFLSKRM--P 719
G + + +A L+YE+ + +L V L G+ K ++ + KR+ P
Sbjct: 453 GFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEP 512
Query: 720 N 720
N
Sbjct: 513 N 513
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 133/262 (50%), Gaps = 6/262 (2%)
Query: 178 ESVKLFTSMKSVG-VSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI 236
+ V + + K +G + P+ TFNS+++ + G T M + ++ EM G +P+ Y++N+
Sbjct: 227 DDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNV 286
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
L+ +C ++ + + +++M DIV YNT++ G+C +V A + + M K
Sbjct: 287 LMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKG 346
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV---QK 353
+ ++Y L+ GYC ++D LVV+ EM KG + + +T L++GLC+ Q+
Sbjct: 347 --IECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQR 404
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
+ + ++++ A+ F P L+ C G ++ AL + +M+ +P TY
Sbjct: 405 VVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYR 464
Query: 414 VLVRNLCHIGDFERAEKLYDEL 435
+ +GD E + L E+
Sbjct: 465 AFIDGYGIVGDEETSALLAIEM 486
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 161/375 (42%), Gaps = 41/375 (10%)
Query: 217 VFDEMLSTY---GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
VF ++ +Y G AP + F++LI+ + +D +K+ S + I T N L+
Sbjct: 147 VFRSLIKSYNRCGSAP--FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALI 204
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
V R + + + E D VS +DEA ++M+ K
Sbjct: 205 TEVSRRRGASNGYKMYR------EVFGLDDVS-------------VDEA----KKMIGK- 240
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+KPNA T+N+++ + + ++ + E G SP+ + N LM +C G ++EA
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
KV+E+M V D Y+ ++ LC + +A++L+ ++ KGI
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI-------ECTCLT 353
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHC--KEG--TFEAGYELL 508
Y+ + CK G +R++ ++G + D + + L+ G C ++G EA +
Sbjct: 354 YEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVK 413
Query: 509 VLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
+ F P Y+ L+ L + G+ A +M+ P+ T+ + + G
Sbjct: 414 DAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIV 473
Query: 569 GYAHESASLVVLLLE 583
G SA L + + E
Sbjct: 474 GDEETSALLAIEMAE 488
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 160/336 (47%), Gaps = 16/336 (4%)
Query: 107 LKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
L++ NW + ++ + +++ G+ N N A L S+ K T + + +L
Sbjct: 129 LRYQNW-----WNFSEIDFLMLITAYGKLGNFNGAERVL-SVLSKMGSTPNVIS--YTAL 180
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST-- 224
+ SYGR G + +F M+S G PS +T+ +L ++ + A+ VF+ +L
Sbjct: 181 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 240
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ PD ++++I + K + + F M VTYN+L+ +V
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 300
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
++ ++ D+ PDVVSY L++ Y + +EAL VFEEM+D G++P YN L
Sbjct: 301 IYDQMQ-----RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ +++ K V + ++ PD + T+++ + NA ++ A K F+++
Sbjct: 356 LDAFAISGMVEQAKTVFK-SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
+P+ TY L++ D E+ ++Y+++ GI
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 152/308 (49%), Gaps = 7/308 (2%)
Query: 124 SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLF 183
+Y ++L+ A ++ + +K + + ++ +I Y +AG ++++ K+F
Sbjct: 211 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 184 TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK 243
+SM GV S VT+NSL+ + ++K ++D+M + + PD ++ +LI+ + +
Sbjct: 271 SSMVGKGVPQSTVTYNSLMS--FETSYKEVSK-IYDQMQRS-DIQPDVVSYALLIKAYGR 326
Query: 244 NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDV 303
++ F++M P YN L+D +G V+ A V K M + + + PD+
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM--RRDRIFPDL 384
Query: 304 VSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEG 363
SYTT+L Y +++ A F+ + G +PN VTY TLIKG + ++K+ EV E
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE- 443
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
+ + G + L T+M+ N AL +++M V PD +VL+
Sbjct: 444 KMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 503
Query: 424 DFERAEKL 431
+ E A++L
Sbjct: 504 ELEEAKEL 511
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 14/338 (4%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
S + F L+ K G N A+ V +LS G P+ ++ L+ + + ++
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLS-VLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 196
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV-KKSEDLNPDVVSYTTLLRG 312
F++M S +P +TY ++ K K A V + ++ +K L PD Y ++
Sbjct: 197 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 256
Query: 313 YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
Y N ++A VF MV KG+ + VTYN+L+ +++ KI + ++ + P
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRS----DIQP 312
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
D + L+ + A EAL VFE+M++ V+P Y++L+ G E+A+ ++
Sbjct: 313 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 372
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKIL 491
+R D P + +Y +M AE+ F+++ G + + +Y L
Sbjct: 373 KS-------MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 425
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
I G+ K E E+ M + I +++D
Sbjct: 426 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI++YGRA +E++ +F M GV P+ +N LL G AK+VF M
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
+ PD +++ ++ + S ++ +FF+++ +P+IVTY TL+ G +A V+
Sbjct: 380 -IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 438
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
V + M N +++ G C +N AL ++EM G+ P+ N L+
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRC--KNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTL 377
+ ++ LE A E+ G +T T+
Sbjct: 497 -------SLASTQDELEEAKELTGIRNETATI 521
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 15/271 (5%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P+V+SYT L+ Y + A +F M G +P+A+TY ++K E K + +EV
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 361 LEGALEV--GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
E L+ PD + ++ + AGN +A KVF M+ V + TY+ L
Sbjct: 232 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL--- 288
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
+ ++ K+YD++ + I P V +Y + + + + +A F +++
Sbjct: 289 MSFETSYKEVSKIYDQMQRSDI-------QPDVVSYALLIKAYGRARREEEALSVFEEML 341
Query: 479 KRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEP 536
G + PT +Y IL+ G E + M R PD Y +++ + +
Sbjct: 342 DAGVR-PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 537 LLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
A + +++ P T+ +++ G K
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 160/336 (47%), Gaps = 16/336 (4%)
Query: 107 LKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
L++ NW + ++ + +++ G+ N N A L S+ K T + + +L
Sbjct: 136 LRYQNW-----WNFSEIDFLMLITAYGKLGNFNGAERVL-SVLSKMGSTPNVIS--YTAL 187
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST-- 224
+ SYGR G + +F M+S G PS +T+ +L ++ + A+ VF+ +L
Sbjct: 188 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 247
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ PD ++++I + K + + F M VTYN+L+ +V
Sbjct: 248 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 307
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
++ ++ D+ PDVVSY L++ Y + +EAL VFEEM+D G++P YN L
Sbjct: 308 IYDQMQ-----RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ +++ K V + ++ PD + T+++ + NA ++ A K F+++
Sbjct: 363 LDAFAISGMVEQAKTVFK-SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
+P+ TY L++ D E+ ++Y+++ GI
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 152/308 (49%), Gaps = 7/308 (2%)
Query: 124 SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLF 183
+Y ++L+ A ++ + +K + + ++ +I Y +AG ++++ K+F
Sbjct: 218 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 184 TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK 243
+SM GV S VT+NSL+ + ++K ++D+M + + PD ++ +LI+ + +
Sbjct: 278 SSMVGKGVPQSTVTYNSLMS--FETSYKEVSK-IYDQMQRS-DIQPDVVSYALLIKAYGR 333
Query: 244 NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDV 303
++ F++M P YN L+D +G V+ A V K M + + + PD+
Sbjct: 334 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM--RRDRIFPDL 391
Query: 304 VSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEG 363
SYTT+L Y +++ A F+ + G +PN VTY TLIKG + ++K+ EV E
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE- 450
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
+ + G + L T+M+ N AL +++M V PD +VL+
Sbjct: 451 KMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 510
Query: 424 DFERAEKL 431
+ E A++L
Sbjct: 511 ELEEAKEL 518
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 14/338 (4%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
S + F L+ K G N A+ V +LS G P+ ++ L+ + + ++
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLS-VLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 203
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV-KKSEDLNPDVVSYTTLLRG 312
F++M S +P +TY ++ K K A V + ++ +K L PD Y ++
Sbjct: 204 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 263
Query: 313 YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
Y N ++A VF MV KG+ + VTYN+L+ +++ KI + ++ + P
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRS----DIQP 319
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
D + L+ + A EAL VFE+M++ V+P Y++L+ G E+A+ ++
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKIL 491
+R D P + +Y +M AE+ F+++ G + + +Y L
Sbjct: 380 KS-------MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 432
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
I G+ K E E+ M + I +++D
Sbjct: 433 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI++YGRA +E++ +F M GV P+ +N LL G AK+VF M
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
+ PD +++ ++ + S ++ +FF+++ +P+IVTY TL+ G +A V+
Sbjct: 387 -IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
V + M N +++ G C +N AL ++EM G+ P+ N L+
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRC--KNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTL 377
+ ++ LE A E+ G +T T+
Sbjct: 504 -------SLASTQDELEEAKELTGIRNETATI 528
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 15/271 (5%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P+V+SYT L+ Y + A +F M G +P+A+TY ++K E K + +EV
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 361 LEGALEV--GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
E L+ PD + ++ + AGN +A KVF M+ V + TY+ L
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL--- 295
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
+ ++ K+YD++ + I P V +Y + + + + +A F +++
Sbjct: 296 MSFETSYKEVSKIYDQMQRSDI-------QPDVVSYALLIKAYGRARREEEALSVFEEML 348
Query: 479 KRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEP 536
G + PT +Y IL+ G E + M R PD Y +++ + +
Sbjct: 349 DAGVR-PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 537 LLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
A + +++ P T+ +++ G K
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 10/327 (3%)
Query: 96 VLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEI--LGRARNLNVARNFLFSIKRKSN 153
LR P KALK + + + Y L + L + R + + S K++
Sbjct: 39 TLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIES--HKND 96
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
+K E+ F+++LIRSYG+A +F +++ F M G S V+FN+LL L +
Sbjct: 97 PKIK-EEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDK 155
Query: 214 AKSVFDEMLSTYG-VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
+FDE+ Y + PD ++ ILI+ +C + + ++M + + + T+
Sbjct: 156 VPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTI 215
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK 332
+ + + G+++ A N+ MVKK +L D +Y + K++ + + EEM
Sbjct: 216 LSSLYKKGELEVADNLWNEMVKKGCEL--DNAAYNVRIMS-AQKESPERVKELIEEMSSM 272
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
GLKP+ ++YN L+ CE +D+ K+V EG LE +P+ T TL+ C + +
Sbjct: 273 GLKPDTISYNYLMTAYCERGMLDEAKKVYEG-LEGNNCAPNAATFRTLIFHLCYSRLYEQ 331
Query: 393 ALKVFEKMMEWKVQPDSATYSVLVRNL 419
+F+K + PD T LV L
Sbjct: 332 GYAIFKKSVYMHKIPDFNTLKHLVVGL 358
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
++ LIR + + SM + R F++M + V++N L++ + + +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL----- 348
++ + PD +SY L++ YC ++A+ + +M KG++ + + T++ L
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 349 ---------------CEV--------------QKIDKIKEVLEGALEVGGFSPDTCTLNT 379
CE+ + +++KE++E + G PDT + N
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIE-EMSSMGLKPDTISYNY 283
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
LM +C G L+EA KV+E + P++AT+ L+ +LC+ +E+ ++
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIF 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 123/275 (44%), Gaps = 10/275 (3%)
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL-EGA 364
Y+TL+R Y + A+ FE+M G +AV++N L+ + DK+ ++ E
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
PD + L+ +C++G +A+++ +M ++ + ++ ++ +L G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ- 483
E A+ L++E++KKG L + AAY K + + ++ G +
Sbjct: 225 LEVADNLWNEMVKKGCELDN-------AAYNVRIMSAQKES-PERVKELIEEMSSMGLKP 276
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
D SY L+ +C+ G + ++ + N P++ +++LI L Y
Sbjct: 277 DTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIF 336
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
+K + +P +T ++ GL++ ++ L+
Sbjct: 337 KKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLI 371
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/610 (21%), Positives = 243/610 (39%), Gaps = 105/610 (17%)
Query: 99 LIKVPSK------ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL--FSI-K 149
LI V SK AL + + ++G ++ + ++L++ +AR A F +S +
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 150 RKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
K++ V L +N++I +YG++G +E+ + F M G+ P+ VTFN+++ I G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 210 RTNMAKSVFDEM-------LSTY--------------------------GVAPDTYTFNI 236
+ S+ M TY G+ PD ++
Sbjct: 348 QLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAH------NVVK 290
L+ F MV++ +M N + D T + L A ++ + +V
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG 467
Query: 291 GMVKKSEDLNPD-------------------------VVSYTTLLRGYCMKQNIDEALVV 325
M + N D V+ Y +++ Y + ++ ++A +
Sbjct: 468 NMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACEL 527
Query: 326 FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
FE M+ G+ P+ TYNTL++ L K + LE E G + D +++
Sbjct: 528 FESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG-YVSDCIPYCAVISSFV 586
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI----- 440
G LN A +V+++M+E+ ++PD Y VL+ G+ ++A + + + GI
Sbjct: 587 KLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSV 646
Query: 441 ------------------------LLRDDGST--PLVAAYKSMFQFLCKNGKTSKAERGF 474
LL+ T P V M + KAE F
Sbjct: 647 IYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF 706
Query: 475 RQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
+ +RG + ++ +++ + K G FE ++ M D Y S++ G
Sbjct: 707 DSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDG 766
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
A +T ++M+ S I P STF S+ L+K G + ++ + + + +I++ + L
Sbjct: 767 RFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWI 826
Query: 595 HTVRLLFSNG 604
T+ L G
Sbjct: 827 STLSSLVGIG 836
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 187/449 (41%), Gaps = 35/449 (7%)
Query: 176 FQESVKLFTSMKSVGVSP-SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTF 234
++ +V++F KS G +V+ +N +L IL K + +S++DEM+ G+ P T+
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRK-GIKPINSTY 225
Query: 235 NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVK 294
LI + K + + KMS PD VT ++ +A + + A K
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 295 KSEDLNPDVV----SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE 350
+ V +Y T++ Y I EA F+ M+++G+ P VT+NT+I
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 351 VQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSA 410
++ ++ +++ +++ +PDT T N L++ H ++ A F++M + ++PD
Sbjct: 346 NGQLGEVTSLMK-TMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPV 403
Query: 411 TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAY-------KSMFQF--- 460
+Y L+ E AE L E+ + + + + L Y KS F
Sbjct: 404 SYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF 463
Query: 461 -----------------LCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEA 503
+ G S+AER F + + Y ++I + + E
Sbjct: 464 HVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEK 523
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
EL M+ PD Y +L+ L P L+KM ++ V + ++++
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 564 GLLKKGYAHESASLVVLLLEGKIRQNVTL 592
+K G + + + ++E I +V +
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVV 612
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 175/429 (40%), Gaps = 28/429 (6%)
Query: 293 VKKSED-LNPDVVSYTTLLRGYCMKQNI--DEALVVFEEMVDKGL-KPNAVTYNTLIKGL 348
++ ED L+P + R +K+ I + A+ +FE KG + N + YN +++ L
Sbjct: 138 IEDVEDALSPWAERLSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 197
Query: 349 CEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
+ K ++ + + + G P T TL++ + G AL KM + +QPD
Sbjct: 198 GKACKWRYVQSLWDEMIR-KGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPD 256
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA---YKSMFQFLCKNG 465
T ++++ +F++AE E KK + + + + Y +M K+G
Sbjct: 257 EVTTGIVLQMYKKAREFQKAE----EFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSG 312
Query: 466 KTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLM--LRRNFDPDSEIY 523
+ +A F+++++ G PT+ + H + G E+ LM ++ + PD+ Y
Sbjct: 313 QIKEASETFKRMLEEGIV-PTTVTFNTMIHIYGNNGQLG-EVTSLMKTMKLHCAPDTRTY 370
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
LI + + A ++M + P ++ ++L + E+ L+ + +
Sbjct: 371 NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDD 430
Query: 584 GKIRQNVTLSTHTVRLLFSNGLRDKG------FRIVGLLYDNGYMVDMKELIIFLSQSRK 637
+ + + R+ + +K F + G + GY + I +
Sbjct: 431 DNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN----IDAYGERGY 486
Query: 638 LLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLEN 697
L EA ++ + C E + I+ N +I+ K +A L+ ++ G P C N
Sbjct: 487 LSEAERVFICCQEVNKRTVIEY-NVMIKAYGISKSCEKACELFESMMSYGV-TPDKCTYN 544
Query: 698 LRVALEAGG 706
V + A
Sbjct: 545 TLVQILASA 553
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 195/488 (39%), Gaps = 61/488 (12%)
Query: 126 FLMLEILGR-ARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFT 184
+ L ++ R +N+N+ F K G +K+ + +++ Y + + E+++ F
Sbjct: 319 YACLAVIDRYCKNMNLPEALGFLDKMLGKG-LKVNCVIVSLILQCYCKMDMCLEALEKFK 377
Query: 185 SMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKN 244
+ + + V +N L K GR A + EM G+ PD + LI G+C
Sbjct: 378 EFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM-KDRGIVPDVINYTTLIDGYCLQ 436
Query: 245 SMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVV 304
V D +M PD++TYN LV G+ R G + + + M K+E P+ V
Sbjct: 437 GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM--KAEGPKPNAV 494
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV---- 360
+ + ++ G C + + EA F + K + A + +KG CE K +
Sbjct: 495 TNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKA----SFVKGYCEAGLSKKAYKAFVRL 550
Query: 361 -----------------LEGALEVGG----------FSPDTCTLNTLMNGHCNAGNLNEA 393
+EG LE P ++ C N+ EA
Sbjct: 551 EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA 610
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+F+ M+E + PD TY++++ C + + ++AE L++++ ++GI P V
Sbjct: 611 QVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI-------KPDVVT 663
Query: 454 YKSMFQFLCK-----------NGKTSK--AERGFRQLMKRGTQ-DPTSYKILIIGHCKEG 499
Y + K G+ K A R+ G D Y +LI CK
Sbjct: 664 YTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMN 723
Query: 500 TFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFH 559
E EL M+ +PD Y +LI +KG +A + ++ K +P+ S
Sbjct: 724 NLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEA 783
Query: 560 SILAGLLK 567
++ + LK
Sbjct: 784 AVKSAALK 791
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 207/485 (42%), Gaps = 71/485 (14%)
Query: 107 LKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL------FSIKRKSNG------ 154
+ F L Q+G N+ +Y ++++ L R NL A L F K NG
Sbjct: 201 MTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGE 260
Query: 155 -------TVKLEDRFF----------NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVT 197
++L DR + ++R + + + + M+ +G V
Sbjct: 261 TEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYA 320
Query: 198 FNSLLLILLKRGRTNM----AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
L ++ R NM A D+ML G+ + +++++ +CK M +
Sbjct: 321 ----CLAVIDRYCKNMNLPEALGFLDKMLGK-GLKVNCVIVSLILQCYCKMDMCLEALEK 375
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
F++ N D V YN D + + G+V+ A +++ M K + PDV++YTTL+ GY
Sbjct: 376 FKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM--KDRGIVPDVINYTTLIDGY 433
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
C++ + +AL + +EM+ G+ P+ +TYN L+ GL +++ E+ E ++ G P+
Sbjct: 434 CLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE-RMKAEGPKPN 492
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG-------DFE 426
T + ++ G C A + EA F +E K + A++ V+ C G F
Sbjct: 493 AVTNSVIIEGLCFARKVKEAEDFFSS-LEQKCPENKASF---VKGYCEAGLSKKAYKAFV 548
Query: 427 RAE---------KLYDELLKKGILLRDDGSTPLVAAYK---------SMFQFLCKNGKTS 468
R E KL+ L +G L + ++AY+ M CK
Sbjct: 549 RLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVR 608
Query: 469 KAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
+A+ F +++RG D +Y I+I +C+ + L M +R PD Y L+
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 528 DGLLQ 532
D L+
Sbjct: 669 DRYLK 673
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 137/693 (19%), Positives = 271/693 (39%), Gaps = 131/693 (18%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGR-ARNLNVARNFLFSIKRKSNGTVKLE-- 159
P+ AL F L + G + N +Y ++ IL ++ + + IK + G ++
Sbjct: 70 PNLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLI 129
Query: 160 ----------------DRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLL 203
R +L+++Y G+F E+ + K + + N L+
Sbjct: 130 EVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMN 189
Query: 204 ILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD 263
+ + G+ M ++F + L G+ + YT+ I+++ C+ +++ + S
Sbjct: 190 RMTEFGKIGMLMTLFKQ-LKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES---- 244
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK----SEDLNP------------------ 301
+ Y T ++G+C G+ + A ++ ++ + +DL
Sbjct: 245 --VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAA 302
Query: 302 --------------DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKG 347
DV + ++ YC N+ EAL ++M+ KGLK N V + +++
Sbjct: 303 ESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQC 362
Query: 348 LCE----VQKIDKIKEV------------------------LEGALEV------GGFSPD 373
C+ ++ ++K KE +E A E+ G PD
Sbjct: 363 YCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPD 422
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
TL++G+C G + +AL + ++M+ + PD TY+VLV L G E ++Y+
Sbjct: 423 VINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILII 493
+ + +G P + + LC K +AE F L ++ ++ S+ +
Sbjct: 483 RM-------KAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASF---VK 532
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
G+C+ G + Y+ V R + +Y L L +G A+ L+KM + P
Sbjct: 533 GYCEAGLSKKAYKAFV---RLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEP 589
Query: 554 TTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV---TLSTHTVRLLFSNGLRDKGF 610
S ++ K E+ L ++E + ++ T+ HT L N L+ K
Sbjct: 590 GRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRL--NELQ-KAE 646
Query: 611 RIVGLLYDNGYMVDMKELIIFLSQSRKL----------------LEANKLLLFCLEKHHN 654
+ + G D+ + L + KL +A+++L
Sbjct: 647 SLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIG 706
Query: 655 IDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+D+ +I+ CKM L +A L+ +++ G
Sbjct: 707 LDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSG 739
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 16/278 (5%)
Query: 105 KALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
KAL+FF W+ GF HN+ + M +L + + +FL + R+ NG +
Sbjct: 109 KALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASI 168
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM-L 222
L++ G G +E++ F MK P V +N+++ L + G A+ + D+M L
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 223 STYGVAPDTYTFNILIRGFCKNSM-----------VDDGFRFFQKMSSFNCDPDIVTYNT 271
+ PDTYT+ ILI +C+ M + + R F++M PD+VTYN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
L+DG C+ ++ A + + M K++ P+ V+Y + +R Y + I+ A+ + M
Sbjct: 289 LIDGCCKTNRIGRALELFEDM--KTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Query: 332 KGLK-PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
G P + TY LI L E ++ + ++++ +E G
Sbjct: 347 LGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAG 384
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 8/219 (3%)
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
T ++ LM G + EAL F +M E+ +PD Y+ ++ LC +G+F++A L D
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 434 ELLKKGILLRDD--GSTPLVAAY-KSMFQFLCKNG---KTSKAERGFRQLMKRG-TQDPT 486
++ G D T L+++Y + Q C+ + +A R FR+++ RG D
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKM 546
+Y LI G CK EL M + P+ Y S I E A + ++ M
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 547 LK-SSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEG 584
K VP +ST+ ++ L++ A E+ LVV ++E
Sbjct: 345 KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEA 383
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 199/454 (43%), Gaps = 52/454 (11%)
Query: 107 LKFFNW-LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
+ FF+W + + G T + SY ++L LGR + + + L K V +
Sbjct: 135 VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVL---KGMVCEGVNPDLECLTI 191
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
+ S+ R + +++LF +S GV S +FN+LL L +R + AKSVF+ +
Sbjct: 192 AMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN---AKK 248
Query: 226 GVAP-DTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P D+ ++NI+I G+ K V++ + ++M PD ++Y+ L++G+ R G++
Sbjct: 249 GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ + + K PD Y ++ + ++ DE++ + M+D+ +PN TY+ L
Sbjct: 309 SVEIFDNIKHKGN--VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 366
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ GL + +K+ E+ E L G P T + + + C+ G + A+ +++K +
Sbjct: 367 VSGLIKGRKVSDALEIFEEMLSRGVL-PTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAG 425
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
+ + Y +L++ L G ++DE+ + G Y S
Sbjct: 426 CRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG--------------YPS-------- 463
Query: 465 GKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
D Y+ ++ G C G E ++ +R+ F P+ +Y
Sbjct: 464 -------------------DVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYS 504
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTF 558
L L+ + LAY+ K+ K+ +F
Sbjct: 505 RLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 178/398 (44%), Gaps = 15/398 (3%)
Query: 172 RAGLFQESVKLF--TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP 229
R L E++ F +++ GV+ V +++ +L L +R + V M+ GV P
Sbjct: 126 RGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCE-GVNP 184
Query: 230 DTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVV 289
D I + F + V F++ SF ++N L+ +C V A +V
Sbjct: 185 DLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF 244
Query: 290 KGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLC 349
K ++ D SY ++ G+ ++E V +EMV+ G P+ ++Y+ LI+GL
Sbjct: 245 NA---KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLG 301
Query: 350 EVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDS 409
+I+ E+ + ++ G PD N ++ +A + +E+++ + +M++ + +P+
Sbjct: 302 RTGRINDSVEIFDN-IKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNL 360
Query: 410 ATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSK 469
TYS LV L A ++++E+L +G+L P S + LC G
Sbjct: 361 ETYSKLVSGLIKGRKVSDALEIFEEMLSRGVL-------PTTGLVTSFLKPLCSYGPPHA 413
Query: 470 AERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID 528
A +++ K G + ++YK+L+ + G + M + D E+Y+ ++D
Sbjct: 414 AMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVD 473
Query: 529 GLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLL 566
GL G A +++ ++ P + + + L+
Sbjct: 474 GLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLM 511
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 150/328 (45%), Gaps = 8/328 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A++ F G + +S+ +L L +++ A++ +F+ K+ G + + +N
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKS-VFNAKK---GNIPFDSCSYN 259
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
+I + + G +E K+ M G P ++++ L+ L + GR N + +FD +
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDN-IKH 318
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G PD +N +I F D+ R++++M C+P++ TY+ LV G+ + KV
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + + M+ S + P T+ L+ C A+V++++ G + + Y L
Sbjct: 379 ALEIFEEML--SRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLL 436
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+K L K + V + ++ G+ D +++G C G+L A+ V E+ M
Sbjct: 437 LKRLSRFGKCGMLLNVWD-EMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKG 495
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLY 432
P+ YS L L E A KL+
Sbjct: 496 FCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 12/306 (3%)
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
D+ +Y+ ++ + R +V+KGMV E +NPD+ T + + + A+
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMV--CEGVNPDLECLTIAMDSFVRVHYVRRAIE 207
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+FEE G+K + ++N L++ LCE + K V + G D+C+ N +++G
Sbjct: 208 LFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGW 265
Query: 385 CNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
G + E KV ++M+E PD +YS L+ L G + +++D + K
Sbjct: 266 SKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK------ 319
Query: 445 DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEA 503
G+ P Y +M ++ R +R+++ + + +Y L+ G K
Sbjct: 320 -GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 504 GYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILA 563
E+ ML R P + + S + L G P A QK K+ + S + +L
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 438
Query: 564 GLLKKG 569
L + G
Sbjct: 439 RLSRFG 444
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 158/373 (42%), Gaps = 15/373 (4%)
Query: 321 EALVVFEEMV--DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
EA+V F + + G+ + +Y+ +++ L + + +VL+G + G +PD L
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMV-CEGVNPDLECLT 190
Query: 379 TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
M+ + A+++FE+ + V+ + +++ L+R LC A+ +++ KK
Sbjct: 191 IAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KK 248
Query: 439 GILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCK 497
G + D S Y M K G+ + E+ +++++ G D SY LI G +
Sbjct: 249 GNIPFDSCS------YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGR 302
Query: 498 EGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
G E+ + + PD+ +Y ++I + + + + ++ML P T
Sbjct: 303 TGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLET 362
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLY 617
+ +++GL+K ++ + +L + L T ++ L S G I
Sbjct: 363 YSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSR 422
Query: 618 DNGYMVDMKELIIFLSQSRKLLEANKLLLFC---LEKHHNIDIDMCNTVIEGLCKMKKLS 674
G + + L + + + LL E + D+++ +++GLC + L
Sbjct: 423 KAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLE 482
Query: 675 EAFGLYYELVEKG 687
A + E + KG
Sbjct: 483 NAVLVMEEAMRKG 495
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 165/345 (47%), Gaps = 17/345 (4%)
Query: 105 KALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
+ L+ F W+ Q + ++ Y ++ ++G+ +A +LFS N + + +
Sbjct: 115 QCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAM-WLFS--EMKNSGCRPDASVY 171
Query: 164 NSLIRSY----GRAGLFQESVKLFTSMKSVG-VSPSVVTFNSLLLILLKRGRTNMAKSVF 218
N+LI ++ +A ++ MK + P+VVT+N LL + G+ + ++F
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
+ L V+PD YTFN ++ + KN M+ + +M S C PDI+T+N L+D +
Sbjct: 232 KD-LDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
+ + K +++ E P + ++ +++ Y + ID+A VF++M D P+
Sbjct: 291 KQEFEKMEQTFKSLMRSKE--KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF 348
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP--DTCTLNTLMNGHCNAGNLNEALKV 396
+TY +I + + +E+ E EVG TLN ++ +C G EA K+
Sbjct: 349 ITYECMIMMYGYCGSVSRAREIFE---EVGESDRVLKASTLNAMLEVYCRNGLYIEADKL 405
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
F ++V PD++TY L + E+ + L ++ K GI+
Sbjct: 406 FHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 165/365 (45%), Gaps = 18/365 (4%)
Query: 166 LIRSYGRAGLFQESVKLFTSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
L G++ + + +++F M K P ++ L+ ++ K+G+T MA +F EM ++
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 225 YGVAPDTYTFNILIRGFC----KNSMVDDGFRFFQKMSSFN-CDPDIVTYNTLVDGVCRA 279
G PD +N LI K ++ + KM C P++VTYN L+ ++
Sbjct: 163 -GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
GKV + + K + ++PDV ++ ++ Y I E V M KP+ +
Sbjct: 222 GKVDQVNALFKDL--DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDII 279
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
T+N LI + Q+ +K+++ + +L P T N+++ + A +++A VF+K
Sbjct: 280 TFNVLIDSYGKKQEFEKMEQTFK-SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M + P TY ++ + G RA ++++E+ + +L+ + +M +
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLK-------ASTLNAMLE 391
Query: 460 FLCKNGKTSKAERGFRQLMK-RGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
C+NG +A++ F R D ++YK L + K E L+ M + P
Sbjct: 392 VYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVP 451
Query: 519 DSEIY 523
+ +
Sbjct: 452 NKRFF 456
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 7/207 (3%)
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
EV + + PD + L++ G A+ +F +M +PD++ Y+ L+
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 419 LCHIGDFERA-EKLYDELLK-KGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
H D +A EK+ L K KGI + P V Y + + ++GK + F+
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGI----ERCQPNVVTYNILLRAFAQSGKVDQVNALFKD 233
Query: 477 L-MKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
L M + D ++ ++ + K G + +L M PD + LID +K E
Sbjct: 234 LDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQE 293
Query: 536 PLLAYQTLQKMLKSSIVPTTSTFHSIL 562
QT + +++S PT TF+S++
Sbjct: 294 FEKMEQTFKSLMRSKEKPTLPTFNSMI 320
>AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30285358-30286704 REVERSE
Length = 448
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 180/380 (47%), Gaps = 19/380 (5%)
Query: 105 KALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF- 162
KAL+FFNW+ + GF H +++ +++ILG+ ++ I R T + +
Sbjct: 63 KALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWAL---INRMIGNTESVPNHVT 119
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F + + Y A L QE++ + + + +N + + + + F + +
Sbjct: 120 FRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNV 179
Query: 223 STYGVA-PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
G + +T N+++RG+ K +++KM + D+ +Y+ +D +C++GK
Sbjct: 180 IGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGK 239
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
A + K M KS + DVV+Y T++R Q ++ + VF EM ++G +PN T+
Sbjct: 240 PWKAVKLYKEM--KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
NT+IK LCE ++ +L+ + G PD+ T L + +E L +F +M+
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLD-EMPKRGCQPDSITYMCLFS---RLEKPSEILSLFGRMI 353
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
V+P TY +L+R FER L +L +++ G TP AAY ++ L
Sbjct: 354 RSGVRPKMDTYVMLMRK------FERWGFL-QPVLYVWKTMKESGDTPDSAAYNAVIDAL 406
Query: 462 CKNGKTSKAERGFRQLMKRG 481
+ G A ++++RG
Sbjct: 407 IQKGMLDMAREYEEEMIERG 426
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 160/354 (45%), Gaps = 46/354 (12%)
Query: 251 FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLL 310
F + ++ S F + T+N ++D + + + + + ++ M+ +E + P+ V++ +
Sbjct: 68 FNWVERESGFRHTTE--TFNRVIDILGKYFEFEISWALINRMIGNTESV-PNHVTFRIVF 124
Query: 311 RGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG-G 369
+ Y + EA+ ++++ D L+ YN L+ LCE + + + +E+ G +G G
Sbjct: 125 KRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNG 183
Query: 370 FS-PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
FS +T N ++ G G + + ++KM V D +YS+ + +C G +A
Sbjct: 184 FSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKA 243
Query: 429 EKLYDELLKKGILL----------------------------RDDGSTPLVAAYKSMFQF 460
KLY E+ + + L R+ G P VA + ++ +
Sbjct: 244 VKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 303
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVL---MLRRNFD 517
LC++G+ A R ++ KRG Q P S I C E E+L L M+R
Sbjct: 304 LCEDGRMRDAYRMLDEMPKRGCQ-PDS----ITYMCLFSRLEKPSEILSLFGRMIRSGVR 358
Query: 518 PDSEIYQSLIDGLLQKG--EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
P + Y L+ + G +P+L + M +S P ++ +++++ L++KG
Sbjct: 359 PKMDTYVMLMRKFERWGFLQPVL--YVWKTMKESGDTPDSAAYNAVIDALIQKG 410
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G46100.1); Has
11639 Blast hits to 3936 proteins in 180 species: Archae
- 0; Bacteria - 2; Metazoa - 206; Fungi - 141; Plants -
11004; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:573098-577243 REVERSE
Length = 1110
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 153/319 (47%), Gaps = 15/319 (4%)
Query: 103 PSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
P A + F++ Q F H+ S+ +++ LGR R N+ + L K +S+G L
Sbjct: 64 PLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVL--AKHRSSG-YPLTGE 120
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK-RGRTNMAKSVFDE 220
F LI+ Y A L ++ + F M +P N +L +L+ RG A +F
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
+GV P+T ++N+L++ FC N + ++ F KM + PD+ +Y L+ G CR G
Sbjct: 181 S-RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+V A ++ M LN V TL+ G C + DE EEM+ KG P+
Sbjct: 240 QVNGAMELLDDM------LNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 293
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF-EK 399
N L+KG C K+++ +V+E ++ G + + T ++ CN +E +K+F E
Sbjct: 294 SNCLVKGFCSFGKVEEACDVVEVVMK-NGETLHSDTWEMVIPLICNEDE-SEKIKLFLED 351
Query: 400 MMEWKVQPDSATYSVLVRN 418
++ ++ D+ V + N
Sbjct: 352 AVKEEITGDTRIVDVGIEN 370
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 121/264 (45%), Gaps = 16/264 (6%)
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC-NAGNLNEALKVFEK 399
+ LIK E + +K+ LE F+P LN +++ + G L +A ++F+
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFN-FTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
V P++ +Y++L++ C D A +L+ ++L++ ++ P V +YK + Q
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV-------PDVDSYKILIQ 233
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
C+ G+ + A ++ +G + LI G C +G F+ G + L M+ + F P
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGF---VPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 290
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
+ L+ G G+ A ++ ++K+ + T+ ++ + + + + +
Sbjct: 291 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE----DESEKIK 346
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSN 603
L LE +++ +T T V + N
Sbjct: 347 LFLEDAVKEEITGDTRIVDVGIEN 370
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 16/282 (5%)
Query: 201 LLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSS- 259
++L+ G A +FDEM +FN L+ + + +D+ + F+++
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEM-PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK 186
Query: 260 FNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNI 319
PD+VTYNT++ +CR G + ++ + + K PD++S+ TLL + ++
Sbjct: 187 LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNG--FEPDLISFNTLLEEFYRRELF 244
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
E +++ M K L PN +YN+ ++GL +K +++ ++ G SPD T N
Sbjct: 245 VEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLID-VMKTEGISPDVHTYNA 303
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
L+ + NL E +K + +M E + PD+ TY +L+ LC GD +RA ++ +E +K
Sbjct: 304 LITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHK 363
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG 481
+L R + YK + + L GK +A QL+K G
Sbjct: 364 LLSRPN-------MYKPVVERLMGAGKIDEAT----QLVKNG 394
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 143/279 (51%), Gaps = 10/279 (3%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
+K ED F ++ YG +G+ + + KLF M + +V +FN+LL + + + A
Sbjct: 119 IKSED-FVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAM 177
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
F E+ G+ PD T+N +I+ C+ +DD F+++ +PD++++NTL++
Sbjct: 178 KTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEE 237
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
R + M KS++L+P++ SY + +RG + +AL + + M +G+
Sbjct: 238 FYRRELFVEGDRIWDLM--KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGIS 295
Query: 336 PNAVTYNTLIKGLCEVQKID-KIKEVLE--GALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
P+ TYN LI ++D ++EV++ ++ G +PDT T L+ C G+L+
Sbjct: 296 PDVHTYNALITAY----RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR 351
Query: 393 ALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKL 431
A++V E+ ++ K+ Y +V L G + A +L
Sbjct: 352 AVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 137/311 (44%), Gaps = 10/311 (3%)
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
Y+ + + A K T V++ K + + D V LL GY + A +F+E
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYS--GMAEHAHKLFDE 147
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
M + + ++N L+ +K+D+ + + E G +PD T NT++ C G
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
++++ L +FE++ + +PD +++ L+ F ++++D L++ +
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD-------LMKSKNLS 260
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYEL 507
P + +Y S + L +N K + A + G + D +Y LI + + E +
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M + PD+ Y LI L +KG+ A + ++ +K ++ + + ++ L+
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMG 380
Query: 568 KGYAHESASLV 578
G E+ LV
Sbjct: 381 AGKIDEATQLV 391
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 222/522 (42%), Gaps = 60/522 (11%)
Query: 99 LIKVPSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVK 157
L+ S AL FFNW Q G++H+ SY + + L +R + A + LF K+ + +
Sbjct: 58 LLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFS-AMDALF--KQVKSNKIL 114
Query: 158 LEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVG--VSPSVVTFNSLLLILLKRGRTNMAK 215
L+ + SLI + Q + + S G + P V N LL L G + A+
Sbjct: 115 LDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVC--NRLLAGLTSDGCYDYAQ 172
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQ--KMSSFNCDPDIVTYNTLV 273
+F +M GV+ +T F + I FC++S + R K ++ N + I+ ++
Sbjct: 173 KLFVKMRHK-GVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL-LIL 230
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
+C+ + A +++ + ++ D PD ++Y + + + N+ E VV ++ G
Sbjct: 231 HSLCKCSREMDAFYILEEL--RNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+ P + Y I L +++ + KEV E + G F D L+ L+ G +A + + A
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAE-VIVSGKFPMDNDILDALI-GSVSAVDPDSA 346
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
++ M+ P T S L +NLC R +K D L+K LL G + +
Sbjct: 347 VEFLVYMVSTGKLPAIRTLSKLSKNLC------RHDK-SDHLIKAYELLSSKGYFSELQS 399
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCK--------------- 497
Y M FLCK G+ ++ +++ K G D + Y LI CK
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 498 --------------------EGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPL 537
EG E L ML R +PD IY SLI+GL ++ +
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIE 519
Query: 538 LAYQTLQK-MLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
A + +K M + T + L G++ E++ L+
Sbjct: 520 AAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 195/444 (43%), Gaps = 23/444 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN LI +YG+ ++E+ L+ + P+ T+ L+ G A+ V EM
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEM- 216
Query: 223 STYGVAPDTY---TFNILIRGFCK-NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
+ V+P T +N I G K ++ FQ+M C P TYN +++ +
Sbjct: 217 QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 276
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
A K + + M +S P++ +YT L+ + + ++A +FE++ + GL+P+
Sbjct: 277 ASKSYMSWKLYCEM--RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV 334
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
YN L++ E+ ++ G PD + N +++ + AG ++A VFE
Sbjct: 335 YVYNALMESYSRAGYPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+M + P ++ +L+ D + E + E+ + G+ P SM
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV-------EPDTFVLNSML 446
Query: 459 QFLCKNGKTSKAERGFRQLMKRG--TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNF 516
+ G+ +K E+ + M+ G T D ++Y ILI + K G E EL V + +NF
Sbjct: 447 NLYGRLGQFTKMEKILAE-MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 517 DPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESAS 576
PD + S I +K + + ++M+ S P T +L+ + + S
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 565
Query: 577 LVVLLLEGKIRQNVTLSTHTVRLL 600
++ + +G VT+S+ +L+
Sbjct: 566 VLRTMHKG-----VTVSSLVPKLM 584
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 170/423 (40%), Gaps = 17/423 (4%)
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV 276
V + +L PD FN+LI + + + + ++ P TY L+
Sbjct: 141 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 277 CRAGKVKTAHNVVKGMVKKSEDLNPDVVS---YTTLLRGYCMKQ-NIDEALVVFEEMVDK 332
C AG ++ A V+ M ++ ++P + Y + G ++ N +EA+ VF+ M
Sbjct: 201 CMAGLIERAEVVLVEM--QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD 258
Query: 333 GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNE 392
KP TYN +I + K + L + P+ CT L+N G +
Sbjct: 259 RCKPTTETYNLMINLYGKASK-SYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK 317
Query: 393 ALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVA 452
A ++FE++ E ++PD Y+ L+ + G A +++ L++ G P A
Sbjct: 318 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS-------LMQHMGCEPDRA 370
Query: 453 AYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVL 510
+Y M + G S AE F + MKR PT S+ +L+ + K ++
Sbjct: 371 SYNIMVDAYGRAGLHSDAEAVFEE-MKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 429
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGY 570
M +PD+ + S+++ + G+ + L +M ST++ ++ K G+
Sbjct: 430 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGF 489
Query: 571 AHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELII 630
L V L E R +V T + L K + + D+G D +
Sbjct: 490 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKV 549
Query: 631 FLS 633
LS
Sbjct: 550 LLS 552
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 8/233 (3%)
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
+K D I V E L F PD N L++ + EA ++ +++E + P T
Sbjct: 133 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT 192
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK-NGKTSKA 470
Y++L++ C G ERAE + E+ + + G V Y + + L K G T +A
Sbjct: 193 YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIG----VTVYNAYIEGLMKRKGNTEEA 248
Query: 471 ERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID 528
F Q MKR PT +Y ++I + K ++L M P+ Y +L++
Sbjct: 249 IDVF-QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 529 GLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLL 581
++G A + +++ + + P +++++ + GY + +A + L+
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 15/242 (6%)
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMK-RGTQDPTSYKILIIGHCKEGTFEAGYELL 508
L+ AY FQ+ +AE + QL++ R +Y +LI +C G E +L
Sbjct: 161 LIDAYGQKFQY-------KEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 509 VLMLRRNFDPDS---EIYQSLIDGLLQ-KGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
V M + P + +Y + I+GL++ KG A Q+M + PTT T++ ++
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 565 LLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVD 624
K ++ S L + + + N+ T V GL +K I L ++G D
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 625 MKELIIFL-SQSRKLLEANKLLLFCLEKHHNIDIDMC--NTVIEGLCKMKKLSEAFGLYY 681
+ + S SR +F L +H + D N +++ + S+A ++
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 682 EL 683
E+
Sbjct: 394 EM 395
>AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8034036-8035292 REVERSE
Length = 418
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 10/333 (3%)
Query: 97 LRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTV 156
LR ++ P KAL + + + Y + L + A++ + K+N +
Sbjct: 40 LRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKI 99
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS 216
K E F ++LIRSYGRA +F ++K+F M +G +VV+FN+LL L
Sbjct: 100 KTET-FLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQ 158
Query: 217 VFDEMLSTY-GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
+FDE Y + PD ++ +LI+ +C + + + M + I+ + T++
Sbjct: 159 LFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGS 218
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
+ + G V A ++ MV K DL+ V Y L K++ + + EEM GLK
Sbjct: 219 LYKNGLVDEAESLWIEMVNKGCDLDNTV--YNVRLMN-AAKESPERVKELMEEMSSVGLK 275
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
P+ V+YN L+ C + + K+V EG LE P+ T TL+ C G ++ L
Sbjct: 276 PDTVSYNYLMTAYCVKGMMSEAKKVYEG-LE----QPNAATFRTLIFHLCINGLYDQGLT 330
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
VF+K PD T L L E A
Sbjct: 331 VFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA 363
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 54/288 (18%)
Query: 231 TYTF-NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVV 289
T TF + LIR + + SM D + F++M +V++N L+ + + +
Sbjct: 101 TETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLF 160
Query: 290 KGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL- 348
++ ++ PD +SY L++ YC ++A+ + +M KG++ + + T++ L
Sbjct: 161 DEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLY 220
Query: 349 -------------------CEV--------------QKIDKIKEVLEGALEVGGFSPDTC 375
C++ + +++KE++E V G PDT
Sbjct: 221 KNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSV-GLKPDTV 279
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE- 434
+ N LM +C G ++EA KV+E + QP++AT+ L+ +LC G LYD+
Sbjct: 280 SYNYLMTAYCVKGMMSEAKKVYEGLE----QPNAATFRTLIFHLCING-------LYDQG 328
Query: 435 --LLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
+ KK ++ P K + + L KN + A RG +++K+
Sbjct: 329 LTVFKKSAIVH---KIPDFKTCKHLTEGLVKNNRMEDA-RGVARIVKK 372
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 147/367 (40%), Gaps = 48/367 (13%)
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTY--NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDT 374
Q+ D+AL +++ + + P + Y ++ L + Q+ I+ ++E +T
Sbjct: 44 QDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTET 103
Query: 375 CTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
L+TL+ + A + A+K+FE+M + +++ L+ H FER +L+DE
Sbjct: 104 F-LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDE 162
Query: 435 LLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIG 494
+ R + TP +Y + + C +GK KA R + +G + I+G
Sbjct: 163 FPQ-----RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILG 217
Query: 495 HC-KEGTFEAGYELLVLMLRRNFDPDSEIYQ-SLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
K G + L + M+ + D D+ +Y L++ K P + +++M +
Sbjct: 218 SLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNA--AKESPERVKELMEEMSSVGLK 275
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
P T +++ ++ KG E+ + EG + N + L NG
Sbjct: 276 PDTVSYNYLMTAYCVKGMMSEAKK----VYEGLEQPNAATFRTLIFHLCING-------- 323
Query: 613 VGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKK 672
LYD G V K I+ H D C + EGL K +
Sbjct: 324 ---LYDQGLTVFKKSAIV---------------------HKIPDFKTCKHLTEGLVKNNR 359
Query: 673 LSEAFGL 679
+ +A G+
Sbjct: 360 MEDARGV 366
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 220/510 (43%), Gaps = 50/510 (9%)
Query: 94 FQVLRLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR-- 150
+ LR K L FF W Q + H+D+++ M+ ++ + + R + +SI R
Sbjct: 43 YSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEK-----LTREY-YSIDRII 96
Query: 151 ---KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK 207
K +G +++ R F L+ + R ++ ++++++T M S G P+ N ++ + K
Sbjct: 97 ERLKISGC-EIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFK 155
Query: 208 RGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD--GFRF-FQKMSSFNCDP 264
N A +F+ + + ++F+I + FC D G + ++M P
Sbjct: 156 LNVVNGALEIFEGIRFR-----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYP 210
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
+ + ++ CR G V A VV M+ ++ +V ++ L+ G+ +A+
Sbjct: 211 NRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNV--WSMLVSGFFRSGEPQKAVD 268
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+F +M+ G PN VTY +LIKG ++ +D+ VL ++ G +PD N +++ +
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS-KVQSEGLAPDIVLCNLMIHTY 327
Query: 385 CNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY-----DELLKKG 439
G EA KVF + + K+ PD T++ ++ +LC G F+ ++ D L G
Sbjct: 328 TRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTG 387
Query: 440 ILLRDDGS----------TPLVAAYKSM----------FQFLCKNGKTSKAERGFRQLMK 479
LL + S + +YK LC+ G A + ++ ++K
Sbjct: 388 NLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIK 447
Query: 480 RGTQDPTSYKILIIGHCKE-GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLL 538
+ II E G + L + + D Y I GL++
Sbjct: 448 EKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEE 507
Query: 539 AYQTLQKMLKSSIVPTTSTFHSILAGLLKK 568
AY M + I P T+ +I++GL K+
Sbjct: 508 AYSLCCDMKEGGIYPNRRTYRTIISGLCKE 537
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 193/451 (42%), Gaps = 23/451 (5%)
Query: 102 VPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
+ KA++ + + GF N ++ +M+++ + +N A I+ ++ + +
Sbjct: 123 IYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALS 182
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F S GR L + L M G P+ F +L + + G + A V M
Sbjct: 183 HFCS---RGGRGDLVGVKIVL-KRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLM 238
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ + G++ +++L+ GF ++ F KM C P++VTY +L+ G G
Sbjct: 239 ICS-GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGM 297
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
V A V+ + +SE L PD+V ++ Y +EA VF + + L P+ T+
Sbjct: 298 VDEAFTVLSKV--QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
+++ LC K D + + G G D T N L N G + ALKV M
Sbjct: 356 ASILSSLCLSGKFDLVPRITHGI----GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMS 411
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
D TY+V + LC G A K+Y ++K+ L + ++ + L
Sbjct: 412 YKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDS-------L 464
Query: 462 CKNGKTSKAERGF-RQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
+ GK + A F R ++++ D SY + I G + E Y L M P+
Sbjct: 465 IELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNR 524
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
Y+++I GL ++ E + ++K+L+ I
Sbjct: 525 RTYRTIISGLCKEKET----EKVRKILRECI 551
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 51/341 (14%)
Query: 103 PSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
P KA+ FN + Q+G + N +Y +++ G V F K +S G +
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIK--GFVDLGMVDEAFTVLSKVQSEGLAP-DIVL 319
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
N +I +Y R G F+E+ K+FTS++ + P TF S+L L G+ ++ +
Sbjct: 320 CNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI----- 374
Query: 223 STYGVAPD--TYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
T+G+ D T N+L F K + MS + D TY + +CR G
Sbjct: 375 -THGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGG 433
Query: 281 KVKTAHNVVKGMVKKSEDLNP---------------------------------DVVSYT 307
+ A + K ++K+ + L+ DVVSYT
Sbjct: 434 APRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYT 493
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
++G + I+EA + +M + G+ PN TY T+I GLC+ ++ +K++++L ++
Sbjct: 494 VAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQE 553
Query: 368 G-GFSPDT-CTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
G P+T + +L++ + G+ +E VFEK WK +
Sbjct: 554 GVELDPNTKFQVYSLLSRY--RGDFSEFRSVFEK---WKSE 589
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/498 (19%), Positives = 190/498 (38%), Gaps = 59/498 (11%)
Query: 197 TFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQK 256
F+ ++ ++ K R + E L G F +L+ F + + D +
Sbjct: 74 AFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTG 133
Query: 257 MSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLN-PDVVSYTTLLRGYCM 315
MSSF P+ N ++D V NVV G ++ E + + S+ L +C
Sbjct: 134 MSSFGFVPNTRAMNMMMD-------VNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCS 186
Query: 316 KQNIDEAL---VVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
+ + + +V + M+ +G PN + +++ C + + +V+ G + G S
Sbjct: 187 RGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVV-GLMICSGISV 245
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
+ L++G +G +A+ +F KM++ P+ TY+ L++ +G +
Sbjct: 246 SVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLG-------MV 298
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKIL 491
DE ++ +G P + M + G+ +A + F L KR D ++ +
Sbjct: 299 DEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASI 358
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ-SLIDGLLQK-GEPLLAYQTLQKMLKS 549
+ C G F+ LV + D ++ +L+ K G A + L M
Sbjct: 359 LSSLCLSGKFD-----LVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYK 413
Query: 550 SIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG 609
T+ L+ L + G + + ++ I++ L H F + + D
Sbjct: 414 DFALDCYTYTVYLSALCRGGAPRAAIKMYKII----IKEKKHLDAH-----FHSAIIDS- 463
Query: 610 FRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCK 669
L + K A L C+ + + +D+ I+GL +
Sbjct: 464 ----------------------LIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVR 501
Query: 670 MKKLSEAFGLYYELVEKG 687
K++ EA+ L ++ E G
Sbjct: 502 AKRIEEAYSLCCDMKEGG 519
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 169/406 (41%), Gaps = 37/406 (9%)
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
D+A+ V+ M G PN N ++ ++ ++ E+ EG FS D +
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHF 184
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
G G+L V ++M+ P+ + ++R C G A ++ ++ G
Sbjct: 185 CSRG--GRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSG 242
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKE 498
I + + + LV+ + ++G+ KA F ++++ G + + +Y LI G
Sbjct: 243 ISVSVNVWSMLVSGFF-------RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDL 295
Query: 499 GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTF 558
G + + +L + PD + +I + G A + + K +VP TF
Sbjct: 296 GMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 559 HSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF-----RIV 613
SIL+ L G LV + G I + L T L SN G+ +++
Sbjct: 356 ASILSSLCLSG----KFDLVPRITHG-IGTDFDLVTGN---LLSNCFSKIGYNSYALKVL 407
Query: 614 GLLYDNGYMVDMKELIIFLS------QSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGL 667
++ + +D ++LS R ++ K+++ EK H +D + +I+ L
Sbjct: 408 SIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIII--KEKKH-LDAHFHSAIIDSL 464
Query: 668 CKMKKLSEAFGLYYE-LVEKGNHQPLSCLENLRVALEAGGRSKEVE 712
++ K + A L+ ++EK PL + + VA++ R+K +E
Sbjct: 465 IELGKYNTAVHLFKRCILEK---YPLDVV-SYTVAIKGLVRAKRIE 506
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F +I YG+AG+F+ + K+F M + SV++FN+LL + ++ + +F+E+
Sbjct: 111 FAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNEL 170
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ PD ++N LI+ C+ + + ++ + PDIVT+NTL+ G+
Sbjct: 171 PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ 230
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ + MV+K ++ D+ +Y L G + E + +F E+ GLKP+ ++
Sbjct: 231 FELGEEIWAKMVEK--NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSF 288
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
N +I+G K+D+ E + G+ PD T L+ C AG+ A+++F++
Sbjct: 289 NAMIRGSINEGKMDEA-EAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETF 347
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKL 431
+ T LV L E AE++
Sbjct: 348 SKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 42/269 (15%)
Query: 237 LIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKS 296
+I + K M ++ + F++M + +C ++++N L+ + K + + K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI-----KGLCE- 350
+ PD+VSY TL++ C K ++ EA+ + +E+ +KGLKP+ VT+NTL+ KG E
Sbjct: 175 -SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 351 --------VQK---ID---------------KIKEVLE--GALEVGGFSPDTCTLNTLMN 382
V+K ID K KE++ G L+ G PD + N ++
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 383 GHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL 442
G N G ++EA ++++++ +PD AT+++L+ +C GDFE A +L+ E K L+
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
Query: 443 RDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
G T L + + L K K +AE
Sbjct: 354 ---GQTTL----QQLVDELVKGSKREEAE 375
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 12/257 (4%)
Query: 278 RAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK-GLKP 336
+AG + A V + M + D V+S+ LL Y + + D +F E+ K +KP
Sbjct: 121 KAGMFENAQKVFEEMPNR--DCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKP 178
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
+ V+YNTLIK LCE + + +L+ +E G PD T NTL+ G ++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLD-EIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
+ KM+E V D TY+ + L + + L+ EL G+ P V ++ +
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGL-------KPDVFSFNA 290
Query: 457 MFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
M + GK +AE +++++K G + D ++ +L+ CK G FE+ EL +
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350
Query: 516 FDPDSEIYQSLIDGLLQ 532
+ Q L+D L++
Sbjct: 351 YLVGQTTLQQLVDELVK 367
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+LI++ E+V L +++ G+ P +VTFN+LLL +G+ + + ++ +M+
Sbjct: 183 YNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMV 242
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
VA D T+N + G + + F ++ + PD+ ++N ++ G GK+
Sbjct: 243 EK-NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKM 301
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A K +VK PD ++ LL C + + A+ +F+E K T
Sbjct: 302 DEAEAWYKEIVKHG--YRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQ 359
Query: 343 TLIKGLCEVQKIDKIKEVLEGA 364
L+ L + K ++ +E+++ A
Sbjct: 360 QLVDELVKGSKREEAEEIVKIA 381
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 166/386 (43%), Gaps = 22/386 (5%)
Query: 197 TFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQK 256
TFN+ + R ++ A V + T ++P + L+ G + + F+ +
Sbjct: 11 TFNTCPI----RRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACE 66
Query: 257 MSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMK 316
F + I Y+ V + A ++ +++ KK D++ + + ++ Y
Sbjct: 67 SERFRTN--IAVYDRTVRRLVAAKRLHYVEEILEEQ-KKYRDMSKEGFA-ARIISLYGKA 122
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV---LEGALEVGGFSPD 373
+ A VFEEM ++ K + +++N L+ +K D ++E+ L G L + PD
Sbjct: 123 GMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSI---KPD 179
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
+ NTL+ C +L EA+ + +++ ++PD T++ L+ + G FE E+++
Sbjct: 180 IVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWA 239
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILI 492
++++K + + + Y + L K+ + F +L G + D S+ +I
Sbjct: 240 KMVEKNVAID-------IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
G EG + +++ + PD + L+ + + G+ A + ++ +
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 553 PTTSTFHSILAGLLKKGYAHESASLV 578
+T ++ L+K E+ +V
Sbjct: 353 VGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
V ++ R +N+ + +E V LF +K+ G+ P V +FN+++ + G+ + A+
Sbjct: 246 VAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAE 305
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
+ + E++ +G PD TF +L+ CK + F++ S T LVD
Sbjct: 306 AWYKEIVK-HGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDL 299
+ + K + A +VK + K+ D
Sbjct: 365 LVKGSKREEAEEIVK--IAKTNDF 386
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 186/413 (45%), Gaps = 23/413 (5%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
L+ Y + G ++ K+F SM+ ++ T+++++ + R +F M+
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRE----RNLFTWSAMIGAYSRENRWREVAKLFRLMMKD- 175
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
GV PD + F +++G V+ G + + N+++ + G++ A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
+ M ++ DV+++ ++L YC +EA+ + +EM +G+ P VT+N LI
Sbjct: 236 TKFFRRMRER------DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
G ++ K D ++++ +E G + D T +++G + G +AL +F KM V
Sbjct: 290 GGYNQLGKCDAAMDLMQ-KMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG 465
P++ T V + + +++ +K G + DD V S+ K G
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI--DD-----VLVGNSLVDMYSKCG 401
Query: 466 KTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQS 525
K A + F + + D ++ +I G+C+ G YEL M N P+ + +
Sbjct: 402 KLEDARKVFDSVKNK---DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 526 LIDGLLQKGEPLLAYQTLQKMLKSSIVP-TTSTFHSILAGLLKKGYAHESASL 577
+I G ++ G+ A Q+M K V T+T++ I+AG ++ G E+ L
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 175/400 (43%), Gaps = 52/400 (13%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NS++ +Y + G +E+V+L M+ G+SP +VT+N L+ + G+ + A + +M
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM- 308
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM----------------SSFNC---- 262
T+G+ D +T+ +I G N M F+KM S+ +C
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 263 ---------------DPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
D++ N+LVD + GK++ A V + N DV ++
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK------NKDVYTWN 422
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
+++ GYC +A +F M D L+PN +T+NT+I G + + ++ + +
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
G +T T N ++ G+ G +EAL++F KM + P+S T L+ ++ +
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKM 542
Query: 428 AEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS 487
+++ +L++ + + A ++ K+G + F + T+D +
Sbjct: 543 VREIHGCVLRRNL-------DAIHAVKNALTDTYAKSGDIEYSRTIF---LGMETKDIIT 592
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
+ LI G+ G++ L M + P+ S+I
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 169/371 (45%), Gaps = 21/371 (5%)
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
+D F +++ G + + + + +G+S + NS+L + K G + A F
Sbjct: 180 DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 239
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
M D +N ++ +C+N ++ ++M P +VT+N L+ G +
Sbjct: 240 RRMRER-----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
GK A ++++ M ++ + DV ++T ++ G +AL +F +M G+ PNA
Sbjct: 295 LGKCDAAMDLMQKM--ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
VT + + ++ I++ EV A+++ GF D N+L++ + G L +A KVF+
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKM-GFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+ D T++ ++ C G +A +L+ ++D P + + +M
Sbjct: 412 SVK----NKDVYTWNSMITGYCQAGYCGKAYELFTR-------MQDANLRPNIITWNTMI 460
Query: 459 QFLCKNGKTSKAERGFRQLMKRG--TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNF 516
KNG +A F+++ K G ++ ++ ++I G+ + G + EL M F
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 517 DPDSEIYQSLI 527
P+S SL+
Sbjct: 521 MPNSVTILSLL 531
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 151/352 (42%), Gaps = 57/352 (16%)
Query: 115 QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAG 174
+MGF + ++++ + L AR S+K K T +NS+I Y +AG
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT-------WNSMITGYCQAG 432
Query: 175 LFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTF 234
++ +LFT M+ + P+++T+N+++ +K G A +F M V +T T+
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 235 NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY------------------------- 269
N++I G+ +N D+ F+KM P+ VT
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 270 ----------NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNI 319
N L D ++G ++ + + GM K D++++ +L+ GY + +
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK------DIITWNSLIGGYVLHGSY 606
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP--DTCTL 377
AL +F +M +G+ PN T +++I + +D+ K+V P + C+
Sbjct: 607 GPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSA 666
Query: 378 NTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHI-GDFERA 428
+ G N L EAL+ ++M +Q ++ + + C I GD + A
Sbjct: 667 MVYLYGRAN--RLEEALQFIQEM---NIQSETPIWESFLTG-CRIHGDIDMA 712
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/472 (18%), Positives = 192/472 (40%), Gaps = 40/472 (8%)
Query: 142 RNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSL 201
+N F+ K++ N + D F+ L R+ G E+ K S+ G T+ L
Sbjct: 35 KNLSFTKKKEPN---IIPDEQFDYLCRN----GSLLEAEKALDSLFQQGSKVKRSTYLKL 87
Query: 202 LLILLKRGRTNMAKSVFDEMLSTYGV--APDTYTFNILIRGFCKNSMVDDGFRFFQKMSS 259
L + G ++ + + + +G+ PD + L+ + K + D + F M
Sbjct: 88 LESCIDSGSIHLGRILH----ARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE 143
Query: 260 FNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNI 319
N + T++ ++ R + + + + M+K + + PD + +L+G ++
Sbjct: 144 RN----LFTWSAMIGAYSRENRWREVAKLFRLMMK--DGVLPDDFLFPKILQGCANCGDV 197
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
+ V+ ++ G+ N+++ + ++D + E D N+
Sbjct: 198 EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE-----RDVIAWNS 252
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
++ +C G EA+++ ++M + + P T+++L+ +G + A L ++ G
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 440 ILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKIL-IIGHCKE 498
I T V + +M L NG +A FR++ G P + I+ + C
Sbjct: 313 I-------TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV-PNAVTIMSAVSACSC 364
Query: 499 -GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTST 557
G E+ + ++ F D + SL+D + G+ + +K+ S T
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK----LEDARKVFDSVKNKDVYT 420
Query: 558 FHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG 609
++S++ G + GY ++ L + + +R N+ + NG D+G
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG--DEG 470
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/508 (21%), Positives = 210/508 (41%), Gaps = 52/508 (10%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A F+ + + G + ++ M+ G +L+ A + L ++ K + + + +N
Sbjct: 324 AANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG---ISPDTKTYNI 380
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
L+ + AG + +++ + ++ VG+ P VT ++L IL +R ++V EM
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM-DRN 439
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNC----------------------- 262
+ D ++ ++++ + +V F++ +C
Sbjct: 440 SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ-LDCVLSSTTLAAVIDVYAEKGLWVEA 498
Query: 263 -------------DPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
D++ YN ++ +A + A ++ KGM K++ PD +Y +L
Sbjct: 499 ETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM--KNQGTWPDECTYNSL 556
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+ +DEA + EM+D G KP TY +I + + ++ E A+E G
Sbjct: 557 FQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYE-AMEKTG 615
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
P+ +L+NG +G + EA++ F M E VQ + + L++ +G E A
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYK 489
++YD+ ++D P VAA SM G S+AE F L ++GT D S+
Sbjct: 676 RVYDK-------MKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFA 728
Query: 490 ILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML-K 548
++ + G + E+ M D + ++ G+ + +ML +
Sbjct: 729 TMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVE 788
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHESAS 576
++ TF ++ L K G E+ S
Sbjct: 789 RKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 207/501 (41%), Gaps = 25/501 (4%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN+LI YG+AG ++ LF+ M GV VTFN+++ G + A+S+ +M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM- 366
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G++PDT T+NIL+ ++ +++K+ PD VT+ ++ +C+ V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
V+ M + S ++ V M+ ++E LVV + + + + + V +
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVI-------MQMYVNEGLVVQAKALFERFQLDCVLSS 479
Query: 343 TLIKGLCEVQKIDKI----KEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
T + + +V + + V G + G D N ++ + A +AL +F+
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
M PD TY+ L + L + + A+++ E+L D G P Y +M
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML-------DSGCKPGCKTYAAMI 592
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFD 517
+ G S A + + K G + + Y LI G + G E + +M
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 518 PDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
+ + SLI + G A + KM S P + +S+L+ G E+ S+
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 578 VVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRK 637
L E ++ +T + L G+ D+ + + ++G + D +Q
Sbjct: 713 FNALREKGTCDVISFAT-MMYLYKGMGMLDEAIEVAEEMRESGLLSDCTS----FNQVMA 767
Query: 638 LLEANKLLLFCLEKHHNIDID 658
A+ L C E H + ++
Sbjct: 768 CYAADGQLSECCELFHEMLVE 788
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 152/373 (40%), Gaps = 40/373 (10%)
Query: 101 KVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLED 160
K+ KAL F + G ++ +Y + ++L ++ A+ L + + K
Sbjct: 529 KLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML---DSGCKPGC 585
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
+ + ++I SY R GL ++V L+ +M+ GV P+ V + SL+ + G A F
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF-R 644
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
M+ +GV + LI+ + K +++ R + KM PD+ N+++ G
Sbjct: 645 MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLG 704
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
V A ++ + +K DV+S+ T++ Y +DEA+ V EEM + GL + +
Sbjct: 705 IVSEAESIFNALREKG---TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTS 761
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA------- 393
+N ++ ++ + E+ L D T TL G +EA
Sbjct: 762 FNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTA 821
Query: 394 --------------------------LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
L+ +++ ++ + Y+ ++ GD +
Sbjct: 822 YNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDM 881
Query: 428 AEKLYDELLKKGI 440
A K Y + +KG+
Sbjct: 882 ALKAYMRMQEKGL 894
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 28/326 (8%)
Query: 193 PSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFR 252
P+V+ +N +L L + G+ + + + EM GV P T+ +L+ + K +V +
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHN-GVLPTNNTYGMLVDVYGKAGLVKEALL 201
Query: 253 FFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVV-------- 304
+ + M PD VT T+V +G+ A KG DL+ D +
Sbjct: 202 WIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGS 261
Query: 305 --SYTTLLRGYCMK------QNIDEALVVFEEMVDKGL-KPN-AVTYNTLIKGLCEVQKI 354
S L + M+ +N E + F D KP T+NTLI + ++
Sbjct: 262 AQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRL 321
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
+ + L+ G DT T NT+++ G+L+EA + +KM E + PD+ TY++
Sbjct: 322 NDAANLFSEMLK-SGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ GD E A + Y ++ K G+ P ++++ LC+ ++ E
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLF-------PDTVTHRAVLHILCQRKMVAEVEAVI 433
Query: 475 RQLMKRGTQ-DPTSYKILIIGHCKEG 499
++ + + D S +++ + EG
Sbjct: 434 AEMDRNSIRIDEHSVPVIMQMYVNEG 459
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 122/317 (38%), Gaps = 23/317 (7%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P+V+ Y +LR DE + + EM G+ P TY L+ K +KE
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVD---VYGKAGLVKEA 199
Query: 361 LEGALEVGG--FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
L +G PD T+ T++ N+G + A + F+ KV D + +N
Sbjct: 200 LLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKN 259
Query: 419 LCHIGDFERAEKLYDELLKKGI---------LLRDDGSTP----LVAAYKSMFQFLCKNG 465
+ L EL K G S+P L + + ++ K G
Sbjct: 260 GSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAG 319
Query: 466 KTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
+ + A F +++K G D ++ +I G LL M + PD++ Y
Sbjct: 320 RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEG 584
L+ G+ A + +K+ K + P T T ++L L ++ E +++ +
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 585 KIRQNVTLSTHTVRLLF 601
IR + H+V ++
Sbjct: 440 SIR----IDEHSVPVIM 452
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 167/363 (46%), Gaps = 49/363 (13%)
Query: 131 ILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVG 190
+L N+A L+ +++ V + +N +IR + G + L M VG
Sbjct: 136 VLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVG 195
Query: 191 VSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDG 250
+ P V+T+ S +I G+C +DD
Sbjct: 196 LYPDVITYTS------------------------------------MINGYCNAGKIDDA 219
Query: 251 FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSED----LNPDVVSY 306
+R ++MS +C + VTY+ +++GVC++G ++ A ++ M K ED ++P+ V+Y
Sbjct: 220 WRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK--EDGGGLISPNAVTY 277
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE-VQKIDKIKEVLEGAL 365
T +++ +C K+ ++EAL+V + M ++G PN VT LI+G+ E + + + ++++ +
Sbjct: 278 TLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLV 337
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
++GG S C ++ EA K+F M+ V+PD S + R LC + +
Sbjct: 338 KLGGVSLSEC-FSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERY 396
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP 485
LY E+ KK D ST + + LC+ G + +A + + ++ + +
Sbjct: 397 LDCFLLYQEIEKK-----DVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLK 451
Query: 486 TSY 488
S+
Sbjct: 452 VSH 454
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 196/449 (43%), Gaps = 67/449 (14%)
Query: 209 GRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVT 268
G+ S ++ L++ V D+ N ++R C + G RFF + +
Sbjct: 38 GQLQGCTSNLEKELASANVQLDSSCINEVLRR-CDPNQFQSGLRFFIWAGTLSSHRHSAY 96
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVK--KSEDLNPDVVSYTTLLRGYCMKQNI-DEALVV 325
T C K++ +++K +++ + E+ +V + +L C + N+ DEAL V
Sbjct: 97 MYT---KACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVL-TLCNQANLADEALWV 152
Query: 326 FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
+ + + + V YN +I+ + ++ I ++L ++ G PD T +++NG+C
Sbjct: 153 LRKFPEFNVCADTVAYNLVIRLFADKGDLN-IADMLIKEMDCVGLYPDVITYTSMINGYC 211
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
NAG +++A ++ ++M + +S TYS ++ +C GD ERA +L E+ K +D
Sbjct: 212 NAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK------ED 265
Query: 446 GS---TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT------------------QD 484
G +P Y + Q C+ + +A ++ RG +D
Sbjct: 266 GGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDED 325
Query: 485 PTSYKILIIGHCKEG-------------------TFEAGYELLVLMLRRNFDPD----SE 521
+ LI K G +E ++ LML R PD S
Sbjct: 326 VKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSH 385
Query: 522 IYQSLIDGLLQKG-EPLLAYQTLQKM-LKSSIVPTTSTFHSI-LAGLLKKGYAHESASLV 578
+++ L LL++ + L YQ ++K +KS+I S H++ L GL ++G + E+A L
Sbjct: 386 VFRELC--LLERYLDCFLLYQEIEKKDVKSTI---DSDIHAVLLLGLCQQGNSWEAAKLA 440
Query: 579 VLLLEGKIRQNVTLSTHTVRLLFSNGLRD 607
+L+ K+R V+ + L G D
Sbjct: 441 KSMLDKKMRLKVSHVEKIIEALKKTGDED 469
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 144/345 (41%), Gaps = 44/345 (12%)
Query: 102 VPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
+ +AL P+ + +Y L++ + +LN+A IK + +
Sbjct: 145 LADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADML---IKEMDCVGLYPDVI 201
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+ S+I Y AG ++ +L M + VT++ +L + K G A + EM
Sbjct: 202 TYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
Query: 222 LSTYG---VAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
G ++P+ T+ ++I+ FC+ V++ +M + C P+ VT L+ GV
Sbjct: 262 EKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLE 321
Query: 279 AGK-VKTAHNVVKGMVKK-----SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK 332
+ VK ++ +VK SE + VS + R +EA +F M+ +
Sbjct: 322 NDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRW-------EEAEKIFRLMLVR 374
Query: 333 GLKPNAVTYNTLIKGLC-------------EVQKIDKIKEVLEGALEVGGFSPDTCTLNT 379
G++P+ + + + + LC E++K D +K ++ +
Sbjct: 375 GVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKD-VKSTIDSDIHA-----------V 422
Query: 380 LMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
L+ G C GN EA K+ + M++ K++ + ++ L GD
Sbjct: 423 LLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGD 467
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 153/312 (49%), Gaps = 13/312 (4%)
Query: 186 MKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNS 245
++++ S V+ +N + + K ++ +FDEML G+ PD TF +I +N
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLER-GIKPDNATFTTIISCARQNG 224
Query: 246 MVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVS 305
+ +F+KMSSF C+PD VT ++D RAG V A ++ ++E D V+
Sbjct: 225 VPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDR--ARTEKWRIDAVT 282
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
++TL+R Y + N D L ++EEM G+KPN V YN LI + ++ + K ++ L
Sbjct: 283 FSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAK-IIYKDL 341
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
GF+P+ T L+ + A ++AL ++ +M E + Y+ L+ ++C +
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRY 400
Query: 426 -ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQD 484
+ A +++ ++ + P + S+ +G+ S+AE Q+ + G +
Sbjct: 401 VDEAFEIFQDMKNC------ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFE- 453
Query: 485 PTSYKILIIGHC 496
PT + + + C
Sbjct: 454 PTLFVLTSVIQC 465
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 139/289 (48%), Gaps = 3/289 (1%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
+K ++ F ++I + G+ + +V+ F M S G P VT +++ + G +MA
Sbjct: 206 IKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMAL 265
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
S++D T D TF+ LIR + + D +++M + P++V YN L+D
Sbjct: 266 SLYDRA-RTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDS 324
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
+ RA + A + K ++ + P+ +Y L+R Y + D+AL ++ EM +KGL
Sbjct: 325 MGRAKRPWQAKIIYKDLI--TNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLS 382
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
+ YNTL+ + + +D+ E+ + PD+ T ++L+ + +G ++EA
Sbjct: 383 LTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEA 442
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
+M E +P + +++ + + +D++L+ GI D
Sbjct: 443 ALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 91 TTGFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 150
TT R VP +A+++F + G ++ + M++ GRA N+++A + R
Sbjct: 214 TTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLY---DR 270
Query: 151 KSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
+++ F++LIR YG +G + + ++ MK++GV P++V +N L+ + + R
Sbjct: 271 ARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKR 330
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
AK ++ +++ T G P+ T+ L+R + + DD +++M ++ YN
Sbjct: 331 PWQAKIIYKDLI-TNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYN 389
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
TL+ V A + + M K E +PD ++++L+ Y + EA +M
Sbjct: 390 TLLSMCADNRYVDEAFEIFQDM-KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMR 448
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDT----CTLNTL 380
+ G +P ++I+ + +++D + + LE+ G +PD C LN +
Sbjct: 449 EAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLEL-GITPDDRFCGCLLNVM 501
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 149/362 (41%), Gaps = 19/362 (5%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
+VVT N++ A V + +L T + + +N+ ++ F K+ ++ +
Sbjct: 145 AVVTLNNMT-------NPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKL 197
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
F +M PD T+ T++ + G K A + M S PD V+ ++ Y
Sbjct: 198 FDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM--SSFGCEPDNVTMAAMIDAY 255
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
N+D AL +++ + + +AVT++TLI+ D + E ++ G P+
Sbjct: 256 GRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYE-EMKALGVKPN 314
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
N L++ A +A +++ ++ P+ +TY+ LVR + A +Y
Sbjct: 315 LVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYR 374
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKI--L 491
E+ +KG+ L V Y ++ N +A F+ + T DP S+ L
Sbjct: 375 EMKEKGLSLT-------VILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSL 427
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
I + G L+ M F+P + S+I + + +T ++L+ I
Sbjct: 428 ITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGI 487
Query: 552 VP 553
P
Sbjct: 488 TP 489
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 131/298 (43%), Gaps = 33/298 (11%)
Query: 297 EDLNP--DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
E + P +V+ Y ++ + ++++++ +F+EM+++G+KP+ T+ T+I +
Sbjct: 167 ETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVP 226
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
+ E E + G PD T+ +++ + AGN++ AL ++++ K + D+ T+S
Sbjct: 227 KRAVEWFE-KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST 285
Query: 415 LVRNLCHIGDFERAEKLYDELLKKG-------------------------ILLRD---DG 446
L+R G+++ +Y+E+ G I+ +D +G
Sbjct: 286 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345
Query: 447 STPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTF-EAGY 505
TP + Y ++ + + A +R++ ++G ++ C + + + +
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAF 405
Query: 506 ELLVLMLR-RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
E+ M DPDS + SLI G A L +M ++ PT S++
Sbjct: 406 EIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVI 463
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 134/334 (40%), Gaps = 14/334 (4%)
Query: 360 VLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL 419
VL LE S + N M + +L ++ K+F++M+E ++PD+AT++ ++
Sbjct: 161 VLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 420 CHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF-RQLM 478
G +RA + +++ + G P +M + G A + R
Sbjct: 221 RQNGVPKRAVEWFEK-------MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRART 273
Query: 479 KRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLL 538
++ D ++ LI + G ++ + M P+ IY LID + + P
Sbjct: 274 EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQ 333
Query: 539 AYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVR 598
A + ++ + P ST+ +++ + Y ++ ++ + E + V L +
Sbjct: 334 AKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS 393
Query: 599 LLFSNGLRDKGFRIVGLLYDNGYMVD-----MKELIIFLSQSRKLLEANKLLLFCLEKHH 653
+ N D+ F I + N D LI + S ++ EA LL E
Sbjct: 394 MCADNRYVDEAFEIFQDM-KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGF 452
Query: 654 NIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ + +VI+ K K++ + + +++E G
Sbjct: 453 EPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELG 486
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 160/377 (42%), Gaps = 50/377 (13%)
Query: 106 ALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
A KFF W Q F H Y L+++I + + + T FN
Sbjct: 135 AYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACT---FN 191
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI + G AGL ++ V+ F K+ P ++N++L LL + + V+++ML
Sbjct: 192 LLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQML-- 249
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+DGF PD++TYN ++ R GK
Sbjct: 250 -----------------------EDGF-----------TPDVLTYNIVMFANFRLGKTDR 275
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ ++ MVK + +PD+ +Y LL AL + M + G++P + + TL
Sbjct: 276 LYRLLDEMVK--DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
I GL K++ K ++ ++VG +PD ++ G+ + G L +A ++F++M E
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGC-TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
P+ TY+ ++R C G F+ A L E+ + G P Y ++ L
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESR-------GCNPNFVVYSTLVNNLKNA 445
Query: 465 GKTSKAERGFRQLMKRG 481
GK +A + ++++G
Sbjct: 446 GKVLEAHEVVKDMVEKG 462
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 45/336 (13%)
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFS--PDTCTLNTLMN 382
+ +EM+ G A T+N LI C + ++V+E ++ F+ P + N +++
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 383 GHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL 442
V+E+M+E PD TY++++ +G +R +L DE++K
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVK----- 285
Query: 443 RDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILIIGHCKEGTF 501
DG +P + Y + L K A + + G + + LI G + G
Sbjct: 286 --DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 502 EAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSI 561
EA + ++ PD Y +I G + GE A + ++M + +P T++S+
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 562 LAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY 621
+ G G E+ +L+ + + S G + F + L +N
Sbjct: 404 IRGFCMAGKFKEACALL-------------------KEMESRGC-NPNFVVYSTLVNN-- 441
Query: 622 MVDMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
L + K+LEA++++ +EK H + +
Sbjct: 442 ----------LKNAGKVLEAHEVVKDMVEKGHYVHL 467
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/364 (19%), Positives = 144/364 (39%), Gaps = 45/364 (12%)
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
+ + A Y+ L+K E + + +++ ++ G+ CT N L+ AG
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLICTCGEAGLAR 204
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
+ ++ F K + +P +Y+ ++ +L + ++ + +Y+++L +DG TP
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQML-------EDGFTP-- 255
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLM 511
D +Y I++ + + G + Y LL M
Sbjct: 256 --------------------------------DVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
++ F PD Y L+ L +PL A L M + + P F +++ GL + G
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 572 HESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM---KEL 628
+ ++ +V T + S G +K + + + G + ++ +
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 629 IIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGN 688
I + K EA LL + N + + +T++ L K+ EA + ++VEKG+
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Query: 689 HQPL 692
+ L
Sbjct: 464 YVHL 467
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 183/407 (44%), Gaps = 38/407 (9%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N+++ + R + ++L + G++P+++T+N + L + +A + +
Sbjct: 134 NTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFID 193
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS--SFNCDPDIVTYNTLVDGVCRAGK 281
+ P TF IL++G N ++ + M+ F DP V Y+ L+ G +
Sbjct: 194 NAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDP--VVYSYLMMGCVKNSD 251
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG--LKPNAV 339
+ + + +K D V Y L++GY MK+ EA+ +EE V + ++ +A+
Sbjct: 252 ADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAM 311
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGG----FSPDTCTLNTLMNGHCNAGNLNEALK 395
YN +++ L E K D+ ++ + + + + T N ++NG+C G EA++
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK---------GILLR--- 443
VF +M ++K PD+ +++ L+ LC AEKLY E+ +K G+L+
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 444 -----DDGST-----------PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS 487
D+G+ P +A Y + L K GK A+ F ++ + D +
Sbjct: 432 KEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEA 491
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
YK ++ + G + +++ ML + SE Q + L+KG
Sbjct: 492 YKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKG 538
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 6/210 (2%)
Query: 124 SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF--FNSLIRSYGRAGLFQESVK 181
+Y +LE L + A ++K++ N L FN ++ Y G F+E+++
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 182 LFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGF 241
+F M SP ++FN+L+ L A+ ++ EM V PD YT+ +L+
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM-EEKNVKPDEYTYGLLMDTC 430
Query: 242 CKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNP 301
K +D+G +++ M N P++ YN L D + +AGK+ A + MV K L
Sbjct: 431 FKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK---LKM 487
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
D +Y ++R +DE L + +EM+D
Sbjct: 488 DDEAYKFIMRALSEAGRLDEMLKIVDEMLD 517
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 37/251 (14%)
Query: 153 NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
N V++ +N ++ + G F E++KLF ++K P + N
Sbjct: 303 NSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVN------------- 349
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
TFN+++ G+C ++ F++M F C PD +++N L
Sbjct: 350 ------------------LGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN-IDEALVVFEEMVD 331
++ +C + A + M +K ++ PD +Y LL C K+ IDE ++ MV+
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEK--NVKPDEYTY-GLLMDTCFKEGKIDEGAAYYKTMVE 448
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
L+PN YN L L + K+D K + + V D +M AG L+
Sbjct: 449 SNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD--MMVSKLKMDDEAYKFIMRALSEAGRLD 506
Query: 392 EALKVFEKMME 402
E LK+ ++M++
Sbjct: 507 EMLKIVDEMLD 517
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 173/412 (41%), Gaps = 41/412 (9%)
Query: 261 NCDPDIVTYNTLVDGVCRAGK-------------VKTAHNVVKGM--------VKKSE-- 297
NC P I T NT++ R K A N++ V+K E
Sbjct: 125 NCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIA 184
Query: 298 -----------DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK 346
LNP + ++ L++G N+++A+ + E+M KG + V Y+ L+
Sbjct: 185 LEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM 244
Query: 347 GLCEVQKIDKIKEVLEGALE-VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM--EW 403
G + D + ++ + E +GGF D LM G+ EA++ +E+ +
Sbjct: 245 GCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENS 304
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
KV+ + Y+ ++ L G F+ A KL+D + K+ R + + M C
Sbjct: 305 KVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVN--LGTFNVMVNGYCA 362
Query: 464 NGKTSKAERGFRQLMK-RGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
GK +A FRQ+ + + D S+ L+ C +L M +N PD
Sbjct: 363 GGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYT 422
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL 582
Y L+D ++G+ + M++S++ P + ++ + L+K G ++ S +++
Sbjct: 423 YGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV 482
Query: 583 EGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQ 634
K++ + +R L G D+ +IV + D+ + +EL F+ +
Sbjct: 483 -SKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKE 533
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 165/339 (48%), Gaps = 12/339 (3%)
Query: 103 PSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
P + L+F+ + + GF H+ S ML ILGR R + L KRK + R
Sbjct: 88 PIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLI--SPR 145
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKS-VGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
++ + +++V+ F K V FN+LL L + A++V+
Sbjct: 146 TMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHS 205
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
+ + PD TFNIL+ G+ ++ FF++M PD+VTYN+L+D C+
Sbjct: 206 L--KHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDR 260
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+++ A+ ++ M + E+ PDV++YTT++ G + D+A V +EM + G P+
Sbjct: 261 EIEKAYKLIDKM--REEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
YN I+ C +++ ++++ ++ G SP+ T N A +L + +++ +M
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVK-KGLSPNATTYNLFFRVLSLANDLGRSWELYVRM 377
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
+ + P++ + L++ + A +L+++++ KG
Sbjct: 378 LGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 40/236 (16%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NSLI Y + +++ KL M+ +P V+T+ +++ L G+ + A+ V EM
Sbjct: 249 YNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEM- 307
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
YG PD +N IR FC + D + +M P+ TYN + A +
Sbjct: 308 KEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE--------------- 327
+ + M+ + P+ S L++ + + +D A+ ++E
Sbjct: 368 GRSWELYVRML--GNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSD 425
Query: 328 --------------------EMVDKGLKPNAVTYNTLIKGLCEV-QKIDKIKEVLE 362
EMV+KG +P+ V++ IK L E+ K D++ +++
Sbjct: 426 VLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKR-IKLLMELANKHDEVNNLIQ 480
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 200/468 (42%), Gaps = 20/468 (4%)
Query: 107 LKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLED-RFFN 164
L F+ W+ Q + ++ ++ +LGR R + L ++ K + D R +N
Sbjct: 222 LYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKE----EFRDVRLYN 277
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD--EML 222
+ I + + ++ +++ +M + V P VT L+ L K GR+ AK V++ E +
Sbjct: 278 AAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRS--AKEVWEIFEKM 335
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S GV F L++ FC + ++ +M + + YNTL+D ++ +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ + M K L P +Y L+ Y + D + EM D GL+PN +Y
Sbjct: 396 EEVEGLFTEMRDKG--LKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI +K+ + ++ G P + + L++ + +G +A FE+M +
Sbjct: 454 CLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK 513
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
++P TY+ ++ GD + +++ +L++ I G+ Y ++
Sbjct: 514 EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI----KGTR---ITYNTLLDGFA 566
Query: 463 KNGKTSKAERGFRQLMKRGTQDPT-SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSE 521
K G +A + K G Q +Y +L+ + + G +LL M N PDS
Sbjct: 567 KQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSI 626
Query: 522 IYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
Y ++I ++ + A+ + M+KS VP ++ + A L K
Sbjct: 627 TYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKA 674
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 169/392 (43%), Gaps = 26/392 (6%)
Query: 200 SLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTF------NILIRGFCKNSMVDDGFRF 253
S+L LL GR MA D +L PD F N I G + DD +
Sbjct: 242 SVLFTLL--GRERMA----DYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEV 295
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGK-VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRG 312
++ M N PD VT L+ + +AG+ K + + M +K + DV + L++
Sbjct: 296 YEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDV--FGGLVKS 353
Query: 313 YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
+C + +EALV+ EM KG++ N + YNTL+ + I+++ E L + G P
Sbjct: 354 FCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEV-EGLFTEMRDKGLKP 412
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
T N LM+ + + + +M + ++P+ +Y+ C I + R +K+
Sbjct: 413 SAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT------CLISAYGRTKKMS 466
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKIL 491
D + ++ G P +Y ++ +G KA F ++ K G + +Y +
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
+ + G E+ LMLR Y +L+DG ++G + A + + K +
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGL 586
Query: 552 VPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
P+ T++ ++ + G + A L LL E
Sbjct: 587 QPSVMTYNMLMNAYARGG---QDAKLPQLLKE 615
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 175/352 (49%), Gaps = 19/352 (5%)
Query: 96 VLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRA--RNLNVARNFLF----SIK 149
VL ++ K FFNW+ +S F M I ++L R F +++
Sbjct: 159 VLNSLREWQKTHTFFNWV-------KSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALE 211
Query: 150 RKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
+G V+L++ ++++I R L+ ++++ F M G+ P VT++++L + K G
Sbjct: 212 MVKDG-VELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF-FQKMSSFNCDPDIVT 268
+ S+++ ++T G PD F++L + F + D G R+ Q+M S + P++V
Sbjct: 271 KVEEVLSLYERAVAT-GWKPDAIAFSVLGKMFGEAGDYD-GIRYVLQEMKSMDVKPNVVV 328
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
YNTL++ + RAGK A ++ M++ L P+ + T L++ Y + +AL ++EE
Sbjct: 329 YNTLLEAMGRAGKPGLARSLFNEMLEAG--LTPNEKTLTALVKIYGKARWARDALQLWEE 386
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
M K + + YNTL+ ++ ++ + + E PD + ++N + + G
Sbjct: 387 MKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGG 446
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
+A+++FE+M++ VQ + + LV+ L + ++D +K+G+
Sbjct: 447 KAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGV 498
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 149/309 (48%), Gaps = 11/309 (3%)
Query: 176 FQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT-NMAKSVFDEMLSTYGVAPDTYTF 234
+Q++ F +KS + P F ++ + L+ GR + + + EM+ GV D T+
Sbjct: 166 WQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKD-GVELDNITY 224
Query: 235 NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVK 294
+ +I + ++ + +F++M PD VTY+ ++D ++GKV+ ++ + V
Sbjct: 225 STIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAV- 283
Query: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKI 354
+ PD ++++ L + + + D V +EM +KPN V YNTL++ + K
Sbjct: 284 -ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKP 342
Query: 355 DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSV 414
+ + LE G +P+ TL L+ + A +AL+++E+M K D Y+
Sbjct: 343 GLARSLFNEMLE-AGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ IG E AE+L++++ K+ + R D +Y +M GK KA F
Sbjct: 402 LLNMCADIGLEEEAERLFNDM-KESVQCRPDN-----FSYTAMLNIYGSGGKAEKAMELF 455
Query: 475 RQLMKRGTQ 483
+++K G Q
Sbjct: 456 EEMLKAGVQ 464
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 158/345 (45%), Gaps = 10/345 (2%)
Query: 108 KFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLI 167
+F + L ++ N + L+L L + + N++ KS +E F+N +
Sbjct: 139 EFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWV-----KSKSLFPMETIFYNVTM 193
Query: 168 RSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGV 227
+S FQ ++ M GV +T+++++ + N A F+ M T G+
Sbjct: 194 KSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKT-GL 252
Query: 228 APDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHN 287
PD T++ ++ + K+ V++ +++ + PD + ++ L AG
Sbjct: 253 MPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRY 312
Query: 288 VVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKG 347
V++ M KS D+ P+VV Y TLL A +F EM++ GL PN T L+K
Sbjct: 313 VLQEM--KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKI 370
Query: 348 LCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW-KVQ 406
+ + ++ E ++ + D NTL+N + G EA ++F M E + +
Sbjct: 371 YGKARWARDALQLWE-EMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCR 429
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
PD+ +Y+ ++ G E+A +L++E+LK G+ + G T LV
Sbjct: 430 PDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLV 474
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 136/300 (45%), Gaps = 45/300 (15%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF- 162
+KA+++F + + G ++ +Y +L++ ++ + + S+ ++ T D
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE----VLSLYERAVATGWKPDAIA 293
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F+ L + +G AG + + MKS+ V P+VV +N+LL + + G+ +A+S+F+EML
Sbjct: 294 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 353
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ P+ T L++ + K D + +++M + D + YNTL++ G
Sbjct: 354 EA-GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLE 412
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY----------------------------- 313
+ A + M K+S PD SYT +L Y
Sbjct: 413 EEAERLFNDM-KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCT 471
Query: 314 CMKQ------NIDEALVVFEEMVDKGLKPNAVTYNTL--IKGLCE-VQKIDKIKEVLEGA 364
C+ Q ID+ + VF+ + +G+KP+ L + LCE + +K+ LE A
Sbjct: 472 CLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERA 531
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 182/448 (40%), Gaps = 48/448 (10%)
Query: 133 GRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVS 192
R+R LN++ + L K + + + ++ L QE ++ + KSV V+
Sbjct: 35 SRSRKLNISCSSLKQPKTLEEEPITTKTPSLSEQLKPLSATTLRQEQTQILSKPKSVWVN 94
Query: 193 PSVVTFNSLLLILLKRGRTN--------------------MAKSVFDEMLSTYGVAPDTY 232
P+ + L L KR + KS F +L P+
Sbjct: 95 PTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRD 154
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
+++ + F + + S F + + YN + + + + + M
Sbjct: 155 NALLVLNSLREWQKTHTFFNWVKSKSLFPM--ETIFYNVTMKSLRFGRQFQLIEEMALEM 212
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQ-NI-DEALVVFEEMVDKGLKPNAVTYNTLIKGLCE 350
VK +L D ++Y+T++ C K+ N+ ++A+ FE M GL P+ VTY+ ++ +
Sbjct: 213 VKDGVEL--DNITYSTIIT--CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSK 268
Query: 351 VQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSA 410
K++++ + E A+ G+ PD + L AG+ + V ++M V+P+
Sbjct: 269 SGKVEEVLSLYERAV-ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 411 TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA 470
Y+ L+ + G A L++E+L+ G+ + T LV Y GK A
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIY----------GKARWA 377
Query: 471 ERGFRQLM-----KRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFD--PDSEIY 523
R QL K+ D Y L + C + E E L ++ + PD+ Y
Sbjct: 378 -RDALQLWEEMKAKKWPMDFILYNTL-LNMCADIGLEEEAERLFNDMKESVQCRPDNFSY 435
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
++++ G+ A + ++MLK+ +
Sbjct: 436 TAMLNIYGSGGKAEKAMELFEEMLKAGV 463
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 54/382 (14%)
Query: 106 ALKFFNWL-PQMGFTHNDQSYFLMLEILG----RARNLNVARNFLFSIKRKSNGTVKLED 160
A +FF W Q ++H +Y M++IL + + + + L +KR +N TV L D
Sbjct: 40 AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKR-NNKTVVLVD 98
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGV--SPSVVTFNSLLLILLKRGRTNMAKSVF 218
++R Y L V+ F K + V P + FN LL L K G +++
Sbjct: 99 VLL-EILRKYCERYLTH--VQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALL 155
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
M + V PD TFN+L G+C+ + ++M P+ TY +D C+
Sbjct: 156 RRM--RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQ 213
Query: 279 AGKVKTAHNVVKGMVKKSEDLN------------------------------------PD 302
AG V A ++ M+ K ++ PD
Sbjct: 214 AGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 273
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
V +Y ++ G CM + +DEA +EM +KG P+ VTYN ++ LCE +K D+ + L
Sbjct: 274 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK-LY 332
Query: 363 GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL--C 420
G + +P T N L++ + + A + +M + D TY ++ L C
Sbjct: 333 GRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDC 392
Query: 421 HIGDFERAEKLYDELLKKGILL 442
H + A L +E++ KG+ L
Sbjct: 393 HRA--KEACFLLEEVVNKGLKL 412
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 3/263 (1%)
Query: 100 IKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLE 159
++ P KA+K + + G + +Y ++ +A ++ A + + K +
Sbjct: 179 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 238
Query: 160 DRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
+ F +I + + +E +L M S G P V T+ ++ + + + A D
Sbjct: 239 AKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD 298
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
EM S G PD T+N +R C+N D+ + + +M C P + TYN L+
Sbjct: 299 EM-SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEM 357
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
A N M K+ D DV +Y ++ G EA + EE+V+KGLK
Sbjct: 358 DDPDGAFNTWTEMDKR--DCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYR 415
Query: 340 TYNTLIKGLCEVQKIDKIKEVLE 362
+++ + L EV + I +V E
Sbjct: 416 VFDSFLMRLSEVGNLKAIHKVSE 438
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 6/281 (2%)
Query: 447 STPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYE 506
+ P + A+ + LCK G + E R++ R D ++ +L G C+ + +
Sbjct: 128 TQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMK 187
Query: 507 LLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML-KSSIV--PTTSTFHSILA 563
LL M+ P++ Y + ID Q G A M+ K S V PT TF ++
Sbjct: 188 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 247
Query: 564 GLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMV 623
L K A E L+ ++ +V+ + + D+ ++ + + + GY
Sbjct: 248 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 307
Query: 624 DMKELIIF---LSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLY 680
D+ F L ++RK EA KL +E + N +I +M AF +
Sbjct: 308 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 367
Query: 681 YELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLSKRMPNE 721
E+ ++ Q + + L R+KE FL + + N+
Sbjct: 368 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNK 408
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 207/485 (42%), Gaps = 72/485 (14%)
Query: 141 ARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNS 200
+ +FL S++R + +K++D N ++R +G +G +Q+ ++LF M+ G SV T++S
Sbjct: 82 SSDFLSSLQRLAT-VLKVQD--LNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSS 137
Query: 201 LLLILLKRGRTNMAKSVFDEMLSTYGVAPD------TYTFNILIRGFCKNSMVDDGFRFF 254
+ + G N++K+ L Y PD Y N ++ KN +D + F
Sbjct: 138 CIKFV---GAKNVSKA-----LEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189
Query: 255 QKMSSFNCDPDIVTYNTLVDG-----------------------------------VCRA 279
+M PD+VTYNTL+ G +C +
Sbjct: 190 DQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICAS 249
Query: 280 -GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
G+ + A N ++ M K E +P++ Y++LL Y K + +A + EM GL PN
Sbjct: 250 NGRSEEAENFIQQM--KVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNK 307
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
V TL+K + D+ +E+L LE G++ + LM+G AG L EA +F+
Sbjct: 308 VMMTTLLKVYIKGGLFDRSRELL-SELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFD 366
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
M V+ D S+++ LC F+ A++L RD +T +
Sbjct: 367 DMKGKGVRSDGYANSIMISALCRSKRFKEAKELS----------RDSETTYEKCDLVMLN 416
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQ----DPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
LC + + E R + K Q D ++ ILI KE Y+ + M +
Sbjct: 417 TMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSK 476
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
+ E+ SLI L + A+ ++ ML+ S H + +L +G +
Sbjct: 477 GHRLEEELCSSLIYHLGKIRAQAEAF-SVYNMLRYSKRTICKELHEKILHILIQGNLLKD 535
Query: 575 ASLVV 579
A +VV
Sbjct: 536 AYIVV 540
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 155/348 (44%), Gaps = 47/348 (13%)
Query: 107 LKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSL 166
++ F W+ Q G + +Y ++ +G A+N++ A SI +S K+ NS+
Sbjct: 118 IQLFEWMQQHGKI-SVSTYSSCIKFVG-AKNVSKALEIYQSIPDES---TKINVYICNSI 172
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL--LILLKRGRTNMAKSVFDEMLST 224
+ + G +KLF MK G+ P VVT+N+LL I +K G + + + L
Sbjct: 173 LSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGE--LPH 230
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G+ D+ + ++ N ++ F Q+M P+I Y++L++ G K
Sbjct: 231 NGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLR----------------------------GYCMK 316
A ++ M KS L P+ V TTLL+ YCM
Sbjct: 291 ADELMTEM--KSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 317 QN-------IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
+ ++EA +F++M KG++ + + +I LC ++ + KE+ + E
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS-ETTY 407
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
D LNT++ +C AG + +++ +KM E V PD T+ +L++
Sbjct: 408 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 6/242 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA++ LP G + Y +L I A NF+ +K + + ++
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSP---NIYHYS 276
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
SL+ SY G ++++ +L T MKS+G+ P+ V +LL + +K G + ++ + E L +
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE-LES 335
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G A + + +L+ G K +++ F M D + ++ +CR+ + K
Sbjct: 336 AGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKE 395
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + + E D+V T+L YC ++ + + ++M ++ + P+ T++ L
Sbjct: 396 AKELSRDSETTYEKC--DLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHIL 453
Query: 345 IK 346
IK
Sbjct: 454 IK 455
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 179/451 (39%), Gaps = 50/451 (11%)
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
N+++R F + D + F+ M + TY++ + V A V A + + +
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFV-GAKNVSKALEIYQSIP 158
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
+S +N V ++L +D + +F++M GLKP+ VTYNTL+ G +V+
Sbjct: 159 DESTKIN--VYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKN 216
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
L G L G D+ T++ + G EA ++M P+ YS
Sbjct: 217 GYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYS 276
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERG 473
L+ + GD+++A++L E+ G++ T L+ Y K G ++
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY-------IKGGLFDRSREL 329
Query: 474 FRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ 532
+L G ++ Y +L+ G K G E + M + D +I L +
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR 389
Query: 533 KGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTL 592
++ +++ + S TT +E LV+L N L
Sbjct: 390 SKR----FKEAKELSRDS--ETT----------------YEKCDLVML--------NTML 419
Query: 593 STHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE---LIIFLSQSRKLLEANKLLLFCL 649
+ G + R++ + + D LI + + + L A + L
Sbjct: 420 CAYC-----RAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMH 474
Query: 650 EKHHNIDIDMCNTVIEGLCKMKKLSEAFGLY 680
K H ++ ++C+++I L K++ +EAF +Y
Sbjct: 475 SKGHRLEEELCSSLIYHLGKIRAQAEAFSVY 505
>AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16091120-16092454 FORWARD
Length = 444
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 176/380 (46%), Gaps = 27/380 (7%)
Query: 123 QSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKL 182
Q+Y +++ L ++ L + L+ ++ + + F +I +YG +G +E++++
Sbjct: 64 QAYRFVIKTLAKSSQLENISSVLYHLE--VSEKFDTPESIFRDVIAAYGFSGRIEEAIEV 121
Query: 183 FTSMKSVGVSPSVVTFNSLLLILL-KRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGF 241
F + + PS T N+LLL+L+ KR + + + GV + TF ILI
Sbjct: 122 FFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRM-GVRLEESTFGILIDAL 180
Query: 242 CKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDL-- 299
C+ VD + MS + D Y+ L+ VC+ K + +V+ + EDL
Sbjct: 181 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDVIGYL----EDLRK 235
Query: 300 ---NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
+P + YT ++R E + V +M ++P+ V Y +++G+ + K
Sbjct: 236 TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK 295
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
++ + L +G +PD T N +NG C ++ ALK+ M + +P+ TY++L+
Sbjct: 296 ADKLFDELLLLGL-APDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILI 354
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNG----------- 465
+ L GD RA+ L+ E+ G+ +++AY + + +C +G
Sbjct: 355 KALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVF 414
Query: 466 -KTSKAERGFRQLMKRGTQD 484
K+S+ E +L ++G D
Sbjct: 415 VKSSRIEEVISRLCEKGLMD 434
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 153/354 (43%), Gaps = 22/354 (6%)
Query: 257 MSSF---NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
+SSF NC+P Y ++ + ++ +++ +V+ + + SE + + ++ Y
Sbjct: 51 LSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHL-EVSEKFDTPESIFRDVIAAY 109
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLC-EVQKIDKIKEVLEGALEVGGFSP 372
I+EA+ VF ++ + P+A T N L+ L + Q ++ + E+L A +G
Sbjct: 110 GFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMG-VRL 168
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD---FERAE 429
+ T L++ C G ++ A ++ M + V D YS L+ ++C D F+
Sbjct: 169 EESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIG 228
Query: 430 KLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQL-MKRGTQDPTSY 488
L D LR +P + Y + +FL + G+ + Q+ R D Y
Sbjct: 229 YLED--------LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCY 280
Query: 489 KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
I++ G + + +L +L PD Y I+GL ++ + A + + M K
Sbjct: 281 TIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNK 340
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFS 602
P T++ ++ L+K G + +L + + +N +HT ++ S
Sbjct: 341 LGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRN----SHTFDIMIS 390
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 170/372 (45%), Gaps = 45/372 (12%)
Query: 106 ALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
ALK FN L Q + ++Y + ++LG + + A + LF + S G +K +
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQA-SLLFEVML-SEG-LKPTIDVYT 183
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVG-VSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
SLI YG++ L ++ MKSV P V TF L+ K GR ++ KS+ EM S
Sbjct: 184 SLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEM-S 242
Query: 224 TYGVAPDTYTFNILIRGFCKN-----------SMVDDG------------------FRFF 254
GV T T+N +I G+ K M++DG R
Sbjct: 243 YLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNM 302
Query: 255 QKMSSF-------NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
+KM S+ PDI T+N L+ +AG K +V+ M K+ L V+Y
Sbjct: 303 RKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLT--TVTYN 360
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
++ + I++ VF +M +G+KPN++TY +L+ + + KI VL +
Sbjct: 361 IVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVN- 419
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
DT N ++N + AG+L +++ +M E K +PD T++ +++ G F+
Sbjct: 420 SDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDA 479
Query: 428 AEKLYDELLKKG 439
++L +++ G
Sbjct: 480 VQELEKQMISSG 491
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 153/346 (44%), Gaps = 10/346 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ L + G ++ LF M S G+ P++ + SL+ + K + A S + M
Sbjct: 147 YTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMK 206
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S PD +TF +LI CK D +MS VTYNT++DG +AG
Sbjct: 207 SVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMF 266
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ +V+ M++ + L PDV + +++ Y +N+ + + G++P+ T+N
Sbjct: 267 EEMESVLADMIEDGDSL-PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
LI + K+ V++ +E FS T T N ++ AG + + VF KM
Sbjct: 326 ILILSFGKAGMYKKMCSVMD-FMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKY 384
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V+P+S TY LV G + + + +++ ++L ++ AY
Sbjct: 385 QGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYG------- 437
Query: 463 KNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYEL 507
+ G + + + Q+ +R + D ++ +I + G F+A EL
Sbjct: 438 QAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQEL 483
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 155/380 (40%), Gaps = 43/380 (11%)
Query: 206 LKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIR--GFCKNSMVDDGFRFFQKMSSFNCD 263
+K R A +F+ + + P T+ L + G CK D F+ M S
Sbjct: 119 IKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQP--DQASLLFEVMLSEGLK 176
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEAL 323
P I Y +L+ ++ + A + ++ M K D PDV ++T L+ C D
Sbjct: 177 PTIDVYTSLISVYGKSELLDKAFSTLEYM-KSVSDCKPDVFTFTVLISCCCKLGRFDLVK 235
Query: 324 VVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG 383
+ EM G+ + VTYNT+I G + ++++ VL +E G PD CTLN+++
Sbjct: 236 SIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGS 295
Query: 384 HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV---------RNLCHIGDF--------- 425
+ N N+ + + + VQPD T+++L+ + +C + DF
Sbjct: 296 YGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLT 355
Query: 426 --------------ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
R EK+ D++ +K ++ G P Y S+ K G K +
Sbjct: 356 TVTYNIVIETFGKAGRIEKM-DDVFRK---MKYQGVKPNSITYCSLVNAYSKAGLVVKID 411
Query: 472 RGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
RQ++ D + +I + + G EL + M R PD + ++I
Sbjct: 412 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
Query: 531 LQKGEPLLAYQTLQKMLKSS 550
G A Q L+K + SS
Sbjct: 472 TAHG-IFDAVQELEKQMISS 490
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 158 LEDRFF-------NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGR 210
+E RFF N +I ++G+AG ++ +F MK GV P+ +T+ SL+ K G
Sbjct: 347 MEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGL 406
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
SV +++++ V DT FN +I + + + + +M C PD +T+
Sbjct: 407 VVKIDSVLRQIVNS-DVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFA 465
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLN 300
T++ G + K M+ E+L+
Sbjct: 466 TMIKTYTAHGIFDAVQELEKQMISSGENLD 495
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 159/366 (43%), Gaps = 11/366 (3%)
Query: 211 TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
+N + F+ S P + + L + + + ++ ++M + D T
Sbjct: 91 SNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLC 150
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
+++ + G V A + G V K+ V Y +LL C + A + M+
Sbjct: 151 FIIEQYGKNGHVDQAVELFNG-VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMI 209
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
KGLKP+ TY L+ G C K+ + +E L+ + GF+P + L+ G NAG L
Sbjct: 210 RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLD-EMSRRGFNPPARGRDLLIEGLLNAGYL 268
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
A ++ KM + PD T+++L+ + G+ E ++Y K G+ + D
Sbjct: 269 ESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID----- 323
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQD-PTSYKILIIGHCKEGTFEAGYELLV 509
YK++ + K GK +A R ++ G + P+ Y +I G C+ G F+ +
Sbjct: 324 --TYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFS 381
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
M + P+ +Y LI + G+ + A L +M + +VP + F + G LK G
Sbjct: 382 DMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG-LKNG 440
Query: 570 YAHESA 575
H+ A
Sbjct: 441 GKHDLA 446
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 135/315 (42%), Gaps = 14/315 (4%)
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMS-SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKG 291
T +I + KN VD F + + C + YN+L+ +C A+ +++
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 292 MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV 351
M++K L PD +Y L+ G+C + EA +EM +G P A + LI+GL
Sbjct: 208 MIRKG--LKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNA 265
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
++ KE++ + GGF PD T N L+ +G + ++++ + + D T
Sbjct: 266 GYLESAKEMVS-KMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDT 324
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
Y L+ + IG + A +L + + +DG P + Y + + +C+NG A
Sbjct: 325 YKTLIPAVSKIGKIDEAFRLLNNCV-------EDGHKPFPSLYAPIIKGMCRNGMFDDAF 377
Query: 472 RGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDG 529
F MK P Y +LI + G F LV M P S + + DG
Sbjct: 378 SFFSD-MKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG 436
Query: 530 LLQKGEPLLAYQTLQ 544
L G+ LA + Q
Sbjct: 437 LKNGGKHDLAMRIEQ 451
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 40/298 (13%)
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAY 454
K+ ++M + + T ++ G ++A +L++ + K G V Y
Sbjct: 132 KILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKT------LGCQQTVDVY 185
Query: 455 KSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLR 513
S+ LC A R+++++G + D +Y IL+ G C G + E L M R
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 514 RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHE 573
R F+P + LI+GLL G A + + KM K VP TF+ ++ + K
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISK------ 299
Query: 574 SASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLS 633
G++ + + +L GL D + K LI +S
Sbjct: 300 ---------SGEVEFCIEMYYTACKL--------------GLCVD---IDTYKTLIPAVS 333
Query: 634 QSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQP 691
+ K+ EA +LL C+E H + +I+G+C+ +AF + ++ K H P
Sbjct: 334 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA-HPP 390
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 116/286 (40%), Gaps = 8/286 (2%)
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
+ + P + Y L + + + + ++M D L + T +I+ +
Sbjct: 101 ARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNG 160
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+D+ E+ G + G N+L++ C+ + A + +M+ ++PD TY
Sbjct: 161 HVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTY 220
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
++LV C G + A++ DE+ ++G P + + L G A+
Sbjct: 221 AILVNGWCSAGKMKEAQEFLDEMSRRGF-------NPPARGRDLLIEGLLNAGYLESAKE 273
Query: 473 GFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
++ K G D ++ ILI K G E E+ + D + Y++LI +
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333
Query: 532 QKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
+ G+ A++ L ++ P S + I+ G+ + G ++ S
Sbjct: 334 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSF 379
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 124/281 (44%), Gaps = 18/281 (6%)
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEG----ALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
P ++ Y L K L +K + + ++L+ +L++ G TL ++ + G+++
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGE-----TLCFIIEQYGKNGHVD 163
Query: 392 EALKVFEKMME-WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+A+++F + + Q Y+ L+ LC + F A L +++KG L+ D T
Sbjct: 164 QAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKG--LKPDKRT-- 219
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILII-GHCKEGTFEAGYELLV 509
Y + C GK +A+ ++ +RG P + L+I G G E+ E++
Sbjct: 220 ---YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVS 276
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
M + F PD + + LI+ + + GE + K + T+ +++ + K G
Sbjct: 277 KMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIG 336
Query: 570 YAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
E+ L+ +E + +L ++ + NG+ D F
Sbjct: 337 KIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAF 377
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
+A +F + + + GF + L++E L A L A+ + + + G + + FN
Sbjct: 235 EAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM---VSKMTKGGFVPDIQTFN 291
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
LI + ++G + ++++ + +G+ + T+ +L+ + K G+ + A + + +
Sbjct: 292 ILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED 351
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G P + +I+G C+N M DD F FF M P+ Y L+ R GK
Sbjct: 352 -GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVD 410
Query: 285 AHNVVKGMVK 294
A N + M +
Sbjct: 411 AANYLVEMTE 420
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 128/272 (47%), Gaps = 3/272 (1%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F +I YGR G+F+ + K+F M + ++FN+LL + + ++ + +F E+
Sbjct: 108 FVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKEL 167
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ PD ++N LI+G C + ++ + PD +T+N L+ GK
Sbjct: 168 PGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK 227
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ + MV+K ++ D+ SY L G M+ +E + +F+++ LKP+ T+
Sbjct: 228 FEEGEQIWARMVEK--NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTF 285
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
+IKG K+D+ + +E G P N+L+ C AG+L A ++ +++
Sbjct: 286 TAMIKGFVSEGKLDEAITWYK-EIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIF 344
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
++ D A +V L + AE++ +
Sbjct: 345 AKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 320 DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV---LEGALEVGGFSPDTCT 376
+ A VF+EM ++ K A+++N L+ +K D ++ + L G L + PD +
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSI---EPDVAS 179
Query: 377 LNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELL 436
NTL+ G C G+ EA+ + +++ ++PD T+++L+ G FE E+++ ++
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 437 KKGI----------------------------LLRDDGSTPLVAAYKSMFQFLCKNGKTS 468
+K + L+ + P V + +M + GK
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 469 KAERGFRQLMKRGTQDPTSYKI--LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSL 526
+A ++++ K G + P + L+ CK G E+ YEL + + D + Q +
Sbjct: 300 EAITWYKEIEKNGCR-PLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEV 358
Query: 527 IDGLLQ 532
+D L++
Sbjct: 359 VDALVK 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 111/249 (44%), Gaps = 9/249 (3%)
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMM-EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
+ N L+N N+ + +F+++ + ++PD A+Y+ L++ LC G F A L DE
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 435 LLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILII 493
+ KG L+ D T + ++S + GK + E+ + +++++ + D SY ++
Sbjct: 203 IENKG--LKPDHITFNILLHESYTK-----GKFEEGEQIWARMVEKNVKRDIRSYNARLL 255
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
G E E L + PD + ++I G + +G+ A +++ K+ P
Sbjct: 256 GLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRP 315
Query: 554 TTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIV 613
F+S+L + K G + L + ++ + + V L +D+ IV
Sbjct: 316 LKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
Query: 614 GLLYDNGYM 622
L N Y+
Sbjct: 376 ELAKTNDYL 384
>AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26838850-26841489 REVERSE
Length = 879
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 173/437 (39%), Gaps = 43/437 (9%)
Query: 127 LMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSM 186
++++ L R A L IK GTV + DR +N IR+ +AG +
Sbjct: 291 ILVDALCSKRKFQEATKLLDEIKLV--GTVNM-DRAYNIWIRALIKAGFLNNPADFLQKI 347
Query: 187 KSV-GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNS 245
+ G V +NS++ LLK + + EM+ GV+P+ T N + FCK
Sbjct: 348 SPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMM-VRGVSPNKKTMNAALCFFCKAG 406
Query: 246 MVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVS 305
VD+ ++ S P ++YN L+ +C V+ A++V+KG + + L +
Sbjct: 407 FVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGK--T 464
Query: 306 YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
++TL C K D A + ++ L P + +I LC+V K++ + E
Sbjct: 465 FSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINE-LF 523
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
G +L+ G + A K+ +M E P + Y +++ +C +
Sbjct: 524 NKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVC---EM 580
Query: 426 ERAEK-LYDELLKKGILLRD-------------------------------DGSTPLVAA 453
E EK + LLK + L + DG TP VA+
Sbjct: 581 ESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVAS 640
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLR 513
M Q KN K + A F L ++G Y+++I+G CK + L M
Sbjct: 641 NILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKG 700
Query: 514 RNFDPDSEIYQSLIDGL 530
P E Y+ I L
Sbjct: 701 EGLQPSIECYEVNIQKL 717
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 136/615 (22%), Positives = 265/615 (43%), Gaps = 56/615 (9%)
Query: 106 ALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNG--TVKLEDRF 162
LKFF+W Q GF H ++ + +IL A+ + + +FL +S G + + R
Sbjct: 129 CLKFFDWAARQPGFHHTRATFHAIFKILRGAKLVTLMIDFL----DRSVGFESCRHSLRL 184
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++L+ Y AG +++ F +M+ G+ ++ LL L++ + +FD+ +
Sbjct: 185 CDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQ-I 243
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S G T +IL++ FCK +D+ + + + + LVD +C K
Sbjct: 244 SVRGFVC-AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKF 302
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD-KGLKPNAVTY 341
+ A ++ +K +N D +Y +R ++ +++ +G + Y
Sbjct: 303 QEATKLLDE-IKLVGTVNMDR-AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRY 360
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
N+++ L + +D + ++L + V G SP+ T+N + C AG ++EAL+++
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMM-VRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
E P + +Y+ L+ LC E E+ YD +LK I D G + ++ L
Sbjct: 420 EIGFAPTAMSYNYLIHTLCAN---ESVEQAYD-VLKGAI---DRGHFLGGKTFSTLTNAL 472
Query: 462 CKNGKTSKAERGFRQL-MKRGTQDPTSYKI----LIIGHCKEGTFEAGYELLVLMLRRNF 516
C GK A R+L + +D +I +I C G E + L +
Sbjct: 473 CWKGKPDMA----RELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGV 528
Query: 517 DPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESAS 576
D +++ SLI G + +A + + +M + PT S + +++ + + ++
Sbjct: 529 DTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFF 588
Query: 577 LVVLLLEGKIRQNVTLSTHTVRL--LFSNGLRDKGF----RIVGLLYDNGYMVDMKELII 630
+L + ++L H V+ LF G GF ++ L+YD M+D +
Sbjct: 589 TTLLKFQ------LSLWEHKVQAYNLFIEG---AGFAGKPKLARLVYD---MMDRDGITP 636
Query: 631 FLSQSRKLLEA---NKLLLFCLEKHHNIDID------MCNTVIEGLCKMKKLSEAFGLYY 681
++ + +L++ N+ + L H++ + +I GLCK KL +A
Sbjct: 637 TVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLE 696
Query: 682 ELVEKGNHQPLSCLE 696
E+ +G + C E
Sbjct: 697 EMKGEGLQPSIECYE 711
>AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G27800.1); Has 13348 Blast hits to 4225
proteins in 143 species: Archae - 3; Bacteria - 6;
Metazoa - 114; Fungi - 126; Plants - 12736; Viruses - 0;
Other Eukaryotes - 363 (source: NCBI BLink). |
chr3:9180348-9181487 FORWARD
Length = 379
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 142/281 (50%), Gaps = 23/281 (8%)
Query: 96 VLRLIKVPSKALKFFNWLPQM-GFTHNDQSYFLMLE--ILGRARNLNVARNFLFS-IKRK 151
LR P AL F W Q G+ HN ++Y M++ I G+ RN NF+ + I+
Sbjct: 81 ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGK-RN-----NFVETLIEEV 134
Query: 152 SNGTVKLEDRFFNSLIR-SYGRAGLFQESVKLFTSM-KSVGVSPSVVTFNSLLLILLKR- 208
G ++ +N +IR GR LF + ++ M +S P + T+ LL LLKR
Sbjct: 135 IAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRF 194
Query: 209 GRTNMA-------KSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFN 261
+ N+ +S+ +M S GV PDT+ N++I+ + K VD+ R F++M+ +
Sbjct: 195 NKLNVCYVYLHAVRSLTKQMKSN-GVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYG 253
Query: 262 CDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDE 321
+P+ TY+ LV GVC G+V K M K + P+ Y L+ M++ +DE
Sbjct: 254 SEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKG--MVPNGSCYMVLICSLSMERRLDE 311
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
A+ V +M+ L P+ +TYNT++ LC + + E++E
Sbjct: 312 AVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVE 352
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 134 RARNLNVARNFLFSIKR-----KSNGTVKLEDRF-FNSLIRSYGRAGLFQESVKLFTSMK 187
R LNV +L +++ KSNG + D F N +I++Y + E++++F M
Sbjct: 193 RFNKLNVCYVYLHAVRSLTKQMKSNGVIP--DTFVLNMIIKAYAKCLEVDEAIRVFKEMA 250
Query: 188 SVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV 247
G P+ T++ L+ + ++GR + EM G+ P+ + +LI +
Sbjct: 251 LYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEM-QVKGMVPNGSCYMVLICSLSMERRL 309
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
D+ M + + PD++TYNT++ +CR G+ A +V+ K+
Sbjct: 310 DEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
L ++ G PDT LN ++ + ++EA++VF++M + +P++ TYS LV+ +C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA-ERGFRQLMK 479
G + Y E+ KG++ P + Y + L + +A E + L
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMV-------PNGSCYMVLICSLSMERRLDEAVEVVYDMLAN 322
Query: 480 RGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL--LQKG 534
+ D +Y ++ C+ G E++ +R+ Y++L+D + L KG
Sbjct: 323 SLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVYFLNKG 379
>AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) |
chr3:1956658-1958240 REVERSE
Length = 486
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 162/379 (42%), Gaps = 47/379 (12%)
Query: 193 PSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFR 252
P T+ LL++L K G+ N A+ +FDEML G+ P + L+ + +++++DD F
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEE-GLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 253 FFQKMSSF-NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR 311
KM SF C PD+ TY+TL+ A + ++ K M
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEM------------------- 221
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFS 371
DE L+ PN VT N ++ G V + D++++VL L
Sbjct: 222 --------DERLIT----------PNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACK 263
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKL 431
PD T+N +++ N G ++ +EK + ++P++ T+++L IG + + +++
Sbjct: 264 PDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNIL------IGSYGK-KRM 316
Query: 432 YDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKI 490
YD++ +R + Y ++ + G E F Q+ G + D ++
Sbjct: 317 YDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCC 376
Query: 491 LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSS 550
LI G+ G F + L + ++ Y ++I + + + + +M +
Sbjct: 377 LINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQ 436
Query: 551 IVPTTSTFHSILAGLLKKG 569
V + TF ++ K+G
Sbjct: 437 CVCDSRTFEIMVEAYEKEG 455
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 146/339 (43%), Gaps = 12/339 (3%)
Query: 171 GRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPD 230
G++G + KLF M G+ P+V + +LL + + A S+ D+M S PD
Sbjct: 135 GKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPD 194
Query: 231 TYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVK 290
+T++ L++ S D +++M P+ VT N ++ G R G+ V+
Sbjct: 195 VFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLS 254
Query: 291 GMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE 350
M+ S PDV + +L + ID +E+ + G++P T+N LI +
Sbjct: 255 DML-VSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGK 313
Query: 351 VQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSA 410
+ DK+ V+E ++ F T T N ++ + G+ F++M ++ D+
Sbjct: 314 KRMYDKMSSVMEYMRKL-EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTK 372
Query: 411 TYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL-VAAYKSMFQFLCKNGKTSK 469
T+ L+ + G F + + + L P A Y ++ K +
Sbjct: 373 TFCCLINGYANAGLFHK--------VISSVQLAAKFEIPENTAFYNAVISACAKADDLIE 424
Query: 470 AERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYEL 507
ER + ++ +R D +++I++ + KEG + Y L
Sbjct: 425 MERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYL 463
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 162/371 (43%), Gaps = 44/371 (11%)
Query: 106 ALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
A FF W Q G+ + + Y M+ ILG+ R + A + +++ S V +
Sbjct: 104 AFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLI- 162
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKR---------------- 208
+IR Y +++ F + K + + F SLL L +
Sbjct: 163 -MIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK 221
Query: 209 -------------------GRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
G A+ V+ EM GV D +++ +I + K ++
Sbjct: 222 YPFDAKSFNIVLNGWCNVIGSPREAERVWMEM-GNVGVKHDVVSYSSMISCYSKGGSLNK 280
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
+ F +M +PD YN +V + +A V A N++K M ++ + + P+VV+Y +L
Sbjct: 281 VLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTM-EEEKGIEPNVVTYNSL 339
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGG 369
++ C + +EA VF+EM++KGL P TY+ ++ L + +++ E+L + G
Sbjct: 340 IKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELL-AKMRKMG 395
Query: 370 FSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAE 429
P T L+ C + + L ++++M E V PD ++Y V++ L G E A
Sbjct: 396 CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAY 455
Query: 430 KLYDELLKKGI 440
Y E+ KG+
Sbjct: 456 GYYKEMKDKGM 466
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 166/393 (42%), Gaps = 50/393 (12%)
Query: 127 LMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSM 186
L++EIL R RN F K G V+ R ++S+I G+ F + L M
Sbjct: 89 LVVEILSRVRNDWETAFTFFVWAGKQQGYVR-SVREYHSMISILGKMRKFDTAWTLIDEM 147
Query: 187 KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD--EMLSTYGVAPDTYTFNILIRGFCKN 244
+ SPS+V +LL+++ K + + + + F L+ C+
Sbjct: 148 RKF--SPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRY 205
Query: 245 SMVDD-GFRFFQKMSSFNCDPDIVTYNTLVDGVCRA-GKVKTAHNVVKGMVKKSEDLNPD 302
V D G F + D ++N +++G C G + A V M + + D
Sbjct: 206 KNVSDAGHLIFCNKDKYPFDAK--SFNIVLNGWCNVIGSPREAERVWMEM--GNVGVKHD 261
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
VVSY++++ Y ++++ L +F+ M + ++P+ YN ++ L + + + + +++
Sbjct: 262 VVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMK 321
Query: 363 GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME-------------------- 402
E G P+ T N+L+ C A EA +VF++M+E
Sbjct: 322 TMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG 381
Query: 403 ------------WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+P TY +L+R LC DF+ L+DE+ +K + P
Sbjct: 382 EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV-------GPD 434
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ 483
+++Y M L NGK +A ++++ +G +
Sbjct: 435 LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 467
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 166/424 (39%), Gaps = 87/424 (20%)
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLL---RGYCMKQNIDEALVV 325
Y++++ + + K TA ++ M K +P +V+ TLL R YC ++ +A+
Sbjct: 124 YHSMISILGKMRKFDTAWTLIDEMRK----FSPSLVNSQTLLIMIRKYCAVHDVGKAINT 179
Query: 326 FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
F L+ + +L+ LC + + ++ + F D + N ++NG C
Sbjct: 180 FHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF--DAKSFNIVLNGWC 237
Query: 386 NA-GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
N G+ EA +V+ +M V+ D +YS ++ G + KL+D + K+ I
Sbjct: 238 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI---- 293
Query: 445 DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAG 504
P Y ++ L K S+A R LMK ++
Sbjct: 294 ---EPDRKVYNAVVHALAKASFVSEA----RNLMKTMEEE-------------------- 326
Query: 505 YELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
+ +P+ Y SLI L + + A Q +ML+ + PT T+H+ +
Sbjct: 327 ---------KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR- 376
Query: 565 LLKKGYAHESASLVVLLLEGKIRQ-NVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMV 623
+L+ G V L K+R+ + T +L R + F V LL+D
Sbjct: 377 ILRTGEE-------VFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWD----- 424
Query: 624 DMKELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYEL 683
+MKE + D+ +I GL K+ EA+G Y E+
Sbjct: 425 EMKEKTV-----------------------GPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 461
Query: 684 VEKG 687
+KG
Sbjct: 462 KDKG 465
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 143/300 (47%), Gaps = 19/300 (6%)
Query: 125 YFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGR-AGLFQESVKLF 183
Y LM+ G+A+ + + +IK + + + FF +L+R YG AG ++++
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKR--CRFSEEFFYNLMRIYGNLAGRINRAIEIL 155
Query: 184 TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP------DTYTFNIL 237
M G PS +FN +L +L+ + +FDE+ + AP D NIL
Sbjct: 156 FGMPDFGCWPSSKSFNFILNLLV-------SAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 238 IRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSE 297
I+G C++ ++ + + P+++T++ L+ G C GK + A +++ M K E
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK--E 266
Query: 298 DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKI 357
+ PD +++ L+ G K ++E + + E M KG +PN TY ++ GL + ++ +
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 358 KEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
KE++ + G P + ++ G C ++ E V +M+ P + + +V+
Sbjct: 327 KEMMSQMIS-WGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 43/261 (16%)
Query: 306 YTTLLRGYC-MKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGA 364
+ L+R Y + I+ A+ + M D G P++ ++N ++ L + D+I ++ A
Sbjct: 134 FYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSA 193
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
++G D C LN L+ G C +GNL AL++ ++ + K +P+ T+S L+R C+ G
Sbjct: 194 PKLG-VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGK 252
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQD 484
FE A KL + + K+ I D
Sbjct: 253 FEEAFKLLERMEKERI-----------------------------------------EPD 271
Query: 485 PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
++ ILI G K+G E G +LL M + +P+ YQ ++ GLL K L A + +
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMS 331
Query: 545 KMLKSSIVPTTSTFHSILAGL 565
+M+ + P+ ++ ++ GL
Sbjct: 332 QMISWGMRPSFLSYKKMVLGL 352
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 8/250 (3%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
++A++ +P G + +S+ +L +L A+ + S + V+++
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLG---VEIDACCL 205
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N LI+ +G + +++L P+V+TF+ L+ +G+ A + + M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM-E 264
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ PDT TFNILI G K V++G ++M C+P+ TY ++ G+ +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A ++ M+ S + P +SY ++ G C +++ E V +MV+ G P + +
Sbjct: 325 EAKEMMSQMI--SWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWK 382
Query: 344 LIKGLCEVQK 353
+++ C V K
Sbjct: 383 VVQ--CVVSK 390
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 17/259 (6%)
Query: 279 AGKVKTAHNVVKGMVKKSEDLN--PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP 336
AG++ A ++ GM D P S+ +L + DE +F G++
Sbjct: 145 AGRINRAIEILFGM----PDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI 200
Query: 337 NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
+A N LIKGLCE ++ ++L+ + P+ T + L+ G CN G EA K+
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKS-RPNVMTFSPLIRGFCNKGKFEEAFKL 259
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
E+M + +++PD+ T+++L+ L G E L + + K G P Y+
Sbjct: 260 LERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVK-------GCEPNPGTYQE 312
Query: 457 MFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRR 514
+ L + +A+ Q++ G + P+ SYK +++G C+ + +L M+
Sbjct: 313 VLYGLLDKKRNLEAKEMMSQMISWGMR-PSFLSYKKMVLGLCETKSVVEMDWVLRQMVNH 371
Query: 515 NFDPDSEIYQSLIDGLLQK 533
F P + ++ ++ ++ K
Sbjct: 372 GFVPKTLMWWKVVQCVVSK 390
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 42/235 (17%)
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+I++ E+L G + G + P + + N ++N +A +E K+F + V+ D+
Sbjct: 147 RINRAIEILFGMPDFGCW-PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
++L++ LC G+ E A +L DE ++ S P V +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQK-------SRPNVMTFSP---------------- 242
Query: 473 GFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ 532
LI G C +G FE ++LL M + +PD+ + LI GL +
Sbjct: 243 ------------------LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 533 KGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIR 587
KG L++M P T+ +L GLL K E+ ++ ++ +R
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMR 339
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5949006-5949644 REVERSE
Length = 212
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 16/187 (8%)
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
F+ M N D D YN ++ G+C+AGK A N+ ++ L PDV +Y ++R
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISG--LQPDVQTYNMMIR-- 57
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
++ A ++ EM+ +GL P+ +TYN++I GLC+ K+ + ++V S
Sbjct: 58 --FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV----------SKS 105
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
T NTL+NG+C A + + + +F +M + + TY+ L+ +GDF A ++
Sbjct: 106 CSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Query: 434 ELLKKGI 440
E++ G+
Sbjct: 166 EMVSNGV 172
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 120/217 (55%), Gaps = 18/217 (8%)
Query: 145 LFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLI 204
+F + R+SN + ++ +N +I +AG F E+ +FT++ G+ P V T+N +++
Sbjct: 1 MFKVMRESN--MDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN-MMIR 57
Query: 205 LLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
GR A+ ++ EM+ G+ PDT T+N +I G CK + + + + S+FN
Sbjct: 58 FSSLGR---AEKLYAEMIRR-GLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFN--- 110
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
TL++G C+A +VK N+ M ++ + +V++YTTL+ G+ + + AL
Sbjct: 111 ------TLINGYCKATRVKDGMNLFCEMYRRG--IVANVITYTTLIHGFRQVGDFNTALD 162
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
+F+EMV G+ +++T+ ++ LC +++ K +L
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
DT N +++G C AG +EA +F ++ +QPD TY++++R RAEKLY
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLY 68
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILI 492
E++++G++ P Y SM LCK K ++A ++ ++ +++ LI
Sbjct: 69 AEMIRRGLV-------PDTITYNSMIHGLCKQNKLAQA--------RKVSKSCSTFNTLI 113
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
G+CK + G L M RR + Y +LI G Q G+ A Q+M+ + +
Sbjct: 114 NGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVY 173
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLE--GKIRQNVTL 592
++ TF IL L + E V +LL+ + NVTL
Sbjct: 174 SSSITFRDILPQLCSR---KELRKAVAMLLQKSSMVSNNVTL 212
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 55/264 (20%)
Query: 182 LFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGF 241
+F M+ + +N ++ L K G+ + A ++F +L + G+ PD T+N++IR
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLIS-GLQPDVQTYNMMIRF- 58
Query: 242 CKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNP 301
S + + + +M PD +TYN+++ G+C+ K+ A V K
Sbjct: 59 ---SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK----------- 104
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
++ TL+ GYC + + + +F EM +G+ N +TY TLI G +V
Sbjct: 105 SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQV---------- 154
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
G+ N AL +F++M+ V S T+ ++ LC
Sbjct: 155 --------------------------GDFNTALDIFQEMVSNGVYSSSITFRDILPQLCS 188
Query: 422 IGDFERAEKLYDELLKKGILLRDD 445
+ +A + LL+K ++ ++
Sbjct: 189 RKELRKAVAM---LLQKSSMVSNN 209
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 156/337 (46%), Gaps = 19/337 (5%)
Query: 149 KRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKR 208
+++S G + LE N LI +G+ G + + +F+ + G +P+ T+ L L KR
Sbjct: 723 EKESCGVLNLE--ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKR 780
Query: 209 GRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQ--KMSSFNCDPDI 266
+ A SV ++ML + GV + +I FCK ++ + ++ K + P
Sbjct: 781 SFMDWACSVCEKMLKS-GVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF 839
Query: 267 VTYNTLVDGVCR-AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVV 325
V TL+ +C+ G + A ++ + E + ++ ++ C +N+ +A +
Sbjct: 840 VA--TLITALCKNDGTITFAQEMLGDL--SGEARRRGIKPFSDVIHSLCRMRNVKDAKAL 895
Query: 326 FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
+M+ KG P +N ++ + +D+ KEVL+ +E G PD T +++G+
Sbjct: 896 LLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK-LMESRGLKPDVYTYTVIISGYA 954
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
G ++EA ++ + + + TY L+R C I +++ A KL +E+ + G+
Sbjct: 955 KGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGV----- 1009
Query: 446 GSTPLVAAYKSMFQFLC-KNGKTSKAERGFRQLMKRG 481
P Y + Q C K KAE F ++ ++G
Sbjct: 1010 --QPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG 1044
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 55/359 (15%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A F+ + GFT N ++Y+L LE L + ++ A + ++ V E +
Sbjct: 751 AFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSV---CEKMLKSGVLSEGEQMGN 807
Query: 166 LIRSYGRAGLFQESVKLF--TSMKSVGVSPSVVTFNSLLLILLKR-GRTNMAKSVFDEML 222
+I + + G +E+ ++ K + P V +L+ L K G A+ + ++
Sbjct: 808 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLS 865
Query: 223 STY---GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
G+ P F+ +I C+ V D M S P +N +V +
Sbjct: 866 GEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKT 921
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
G + A V+K M +S L PDV +YT ++ GY +DEA + E K K + V
Sbjct: 922 GDLDEAKEVLKLM--ESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV 979
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
TY+ LI+G C++++ D EALK+ +
Sbjct: 980 TYHALIRGYCKIEEYD------------------------------------EALKLLNE 1003
Query: 400 MMEWKVQPDSATYSVLVRNLCHIG-DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
M + VQP++ Y+ L+++ C D+E+AE L++E+ +KG+ L + S L+ A K M
Sbjct: 1004 MDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHL-NAISQGLIRAVKEM 1061
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
F+ +I S R +++ L M S G +P FN ++ K G + AK V +++
Sbjct: 876 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVL-KLM 934
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ G+ PD YT+ ++I G+ K M+D+ + + VTY+ L+ G C+ +
Sbjct: 935 ESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEY 994
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQ-NIDEALVVFEEMVDKGLKPNAVTY 341
A ++ M + + P+ Y L++ +C+K + ++A V+FEEM KGL NA++
Sbjct: 995 DEALKLLNEMDRFG--VQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS- 1051
Query: 342 NTLIKGLCEVQKIDKIKE 359
LI+ + E++ K+ E
Sbjct: 1052 QGLIRAVKEMESEAKVTE 1069
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 130/601 (21%), Positives = 245/601 (40%), Gaps = 75/601 (12%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN---------- 212
+ ++R YG+ G + + + F M VG P V ++L + GR +
Sbjct: 191 YTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQ 250
Query: 213 -----MAKSVFDEMLSTY-------------------GVAPDTYTFNILIRGFCKNSMVD 248
++ SV++ MLS+ GV P+ +T+ +++ + K +
Sbjct: 251 ERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKE 310
Query: 249 DGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTT 308
+ + F +M S P+ VTY++++ +AG + A + + M +S+ + P + T
Sbjct: 311 EALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM--RSQGIVPSNYTCAT 368
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
+L Y +N +AL +F +M + + V +I+ ++ + + E E
Sbjct: 369 MLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFE-ETERL 427
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
D T + H N+GN+ +AL V E M + Y V+++ I + + A
Sbjct: 428 NLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCA 487
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTS 487
E+ + L K G+ P ++ M + KA+ +Q+M D
Sbjct: 488 EEAFRALSKTGL--------PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIEL 539
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML 547
YK + +CKEG +L+V M R D+ Q+L + + + K
Sbjct: 540 YKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESM----------HIVNKHD 589
Query: 548 KSSIVPTTSTFHSILAGL-----LKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFS 602
K V S + GL LK+G +E+ +++ L+ + L + V + S
Sbjct: 590 KHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFK------TDLGSSAVNRVIS 643
Query: 603 NGLRD----KGFRIVGLLYDNGYMVD---MKELIIFLSQSRKLLEANKLLLFCLEKHHNI 655
+ +R+ K I ++ G ++ + LI + KL EA +L L E
Sbjct: 644 SFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGES-KTP 702
Query: 656 DIDMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVEFLS 715
+ ++I+ + L +A+GL+ E EKG + L AL G+ +E E +S
Sbjct: 703 GKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHIS 762
Query: 716 K 716
+
Sbjct: 763 R 763
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 192/429 (44%), Gaps = 24/429 (5%)
Query: 127 LMLEILGRARNLNVAR---NFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLF 183
LML + + NLN + N +F S+ N +I S+ R G ++ +
Sbjct: 607 LMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--------NRVISSFVREGDVSKAEMIA 658
Query: 184 TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK 243
+ +G+ T +L+ + ++ + AK ++ + + P +I + +
Sbjct: 659 DIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY--LAAGESKTPGKSVIRSMIDAYVR 716
Query: 244 NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDV 303
++D + F + + CDP VT + LV+ + GK + A ++ + ++K+ +L D
Sbjct: 717 CGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIEL--DT 774
Query: 304 VSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEG 363
V Y TL++ + A ++E M G+ + TYNT+I ++DK E+
Sbjct: 775 VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN 834
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
A G + + N +M+ + G ++EAL +F +M + ++P + +Y+++V+ +C
Sbjct: 835 ARRSGLYLDEKIYTNMIMH-YGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATS 892
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-T 482
R DELL+ + +G ++ Y ++ Q ++ + ++AE+ + ++G
Sbjct: 893 ---RLHHEVDELLQA---MERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIP 946
Query: 483 QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQT 542
+ + L+ K G E M PDS ++++ G + G+
Sbjct: 947 LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILF 1006
Query: 543 LQKMLKSSI 551
+KM++SS+
Sbjct: 1007 YEKMIRSSV 1015
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 153/373 (41%), Gaps = 45/373 (12%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVA-RNFLFSIKRKSNGTVKLEDRF 162
SKA + + ++G +++ ++ + GR L A R +L + + K+ G
Sbjct: 652 SKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGK-----SV 706
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
S+I +Y R G +++ LF G P VT + L+ L RG+ A+ + L
Sbjct: 707 IRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCL 766
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ DT +N LI+ + + +++M + I TYNT++ R ++
Sbjct: 767 EK-NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQL 825
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + + L+ + YT ++ Y + EAL +F EM KG+KP +YN
Sbjct: 826 DKAIEIFSNARRSGLYLDEKI--YTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYN 883
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCN---------------- 386
++K +C ++ + L A+E G D T TL+ +
Sbjct: 884 MMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE 942
Query: 387 -------------------AGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
AG + EA + + KM E + PDSA +++ GD E+
Sbjct: 943 KGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEK 1002
Query: 428 AEKLYDELLKKGI 440
Y+++++ +
Sbjct: 1003 GILFYEKMIRSSV 1015
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 222/534 (41%), Gaps = 34/534 (6%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ ++ SY + G +E++K F MKS+G P VT++S++ + +K G A ++++M
Sbjct: 296 YTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMR 355
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S G+ P YT ++ + K F M D V ++ GK+
Sbjct: 356 SQ-GIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIY---GKL 411
Query: 283 KTAHNVVKGMVKKSEDLN--PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
H+ + M +++E LN D +Y + + + N+ +AL V E M + + +
Sbjct: 412 GLFHD-AQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 470
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF-EK 399
Y +++ ++Q +D +E AL G PD + N ++N + NL E K F ++
Sbjct: 471 YIVMLQCYAKIQNVDCAEEAFR-ALSKTGL-PDASSCNDMLNLYTRL-NLGEKAKGFIKQ 527
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
+M +V D Y +R C G A+ L ++K G R + + +SM
Sbjct: 528 IMVDQVHFDIELYKTAMRVYCKEGMVAEAQDL---IVKMGREARVKDNRFVQTLAESM-H 583
Query: 460 FLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
+ K+ K +A QL D + +++ KEG +L LM + D
Sbjct: 584 IVNKHDK-HEAVLNVSQL------DVMALGLMLNLRLKEGNLNETKAILNLMFKT--DLG 634
Query: 520 SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVV 579
S +I +++G+ A +++ + T +++A ++ E+ L +
Sbjct: 635 SSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYL 694
Query: 580 LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGY------MVDMKELIIFLS 633
E K + + + L D GL ++ V + L+ L+
Sbjct: 695 AAGESKTPGKSVIRSMIDAYVRCGWLEDA----YGLFMESAEKGCDPGAVTISILVNALT 750
Query: 634 QSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
K EA + CLEK+ +D NT+I+ + + KL A +Y + G
Sbjct: 751 NRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSG 804
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 121/590 (20%), Positives = 240/590 (40%), Gaps = 41/590 (6%)
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
E+ ++S+I +AG +++++ L+ M+S G+ PS T ++L + K A S+F
Sbjct: 327 EEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLF 386
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
+M + D ++IR + K + D F++ N D TY +
Sbjct: 387 ADM-ERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLN 445
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
+G V A +V++ M K+ D+ +Y +L+ Y QN+D A F + GL P+A
Sbjct: 446 SGNVVKALDVIEMM--KTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDA 502
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
+ N ++ + +K K ++ + V D T M +C G + EA +
Sbjct: 503 SSCNDMLNLYTRLNLGEKAKGFIKQIM-VDQVHFDIELYKTAMRVYCKEGMVAEAQDLIV 561
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD----ELLKKGILLR----------- 443
KM D+ L ++ + ++ E + + +++ G++L
Sbjct: 562 KMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNET 621
Query: 444 ----------DDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILI 492
D GS+ A + + G SKAE +++ G + + + LI
Sbjct: 622 KAILNLMFKTDLGSS----AVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLI 677
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
+ ++ + + L L + P + +S+ID ++ G AY + +
Sbjct: 678 AVYGRQHKLKEA-KRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCD 736
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
P T ++ L +G E+ + LE I + ++ + G I
Sbjct: 737 PGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEI 796
Query: 613 VGLLYDNGYMVDMKELIIFLSQSRKLLEANKLL-LFCLEKHHNIDID--MCNTVIEGLCK 669
++ +G ++ +S + L+ +K + +F + + +D + +I K
Sbjct: 797 YERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGK 856
Query: 670 MKKLSEAFGLYYELVEKGNHQPLSCLENLRVALEAGGR-SKEVEFLSKRM 718
K+SEA L+ E+ +KG +P + N+ V + A R EV+ L + M
Sbjct: 857 GGKMSEALSLFSEMQKKGI-KPGTPSYNMMVKICATSRLHHEVDELLQAM 905
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 122/262 (46%), Gaps = 8/262 (3%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
++L+ +N+LI++ AG Q + +++ M + GV S+ T+N+++ + + + + A
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
+F + G+ D + +I + K + + F +M P +YN +V
Sbjct: 830 EIFSNARRS-GLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK- 887
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLN--PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
+C ++ H+ V +++ E D+ +Y TL++ Y EA + +KG
Sbjct: 888 ICATSRL---HHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG 944
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+ + +++L+ L + +++ + + G SPD+ T++ G+ G+ +
Sbjct: 945 IPLSHSHFSSLLSALVKAGMMEEAERTY-CKMSEAGISPDSACKRTILKGYMTCGDAEKG 1003
Query: 394 LKVFEKMMEWKVQPDSATYSVL 415
+ +EKM+ V+ D SV+
Sbjct: 1004 ILFYEKMIRSSVEDDRFVSSVV 1025
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 162/417 (38%), Gaps = 15/417 (3%)
Query: 195 VVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFF 254
V+ +L + LK G N K++ + M T + N +I F + V
Sbjct: 602 VMALGLMLNLRLKEGNLNETKAILNLMFKT---DLGSSAVNRVISSFVREGDVSKAEMIA 658
Query: 255 QKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYC 314
+ + T TL+ R K+K A + + E P +++ Y
Sbjct: 659 DIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---LAAGESKTPGKSVIRSMIDAYV 715
Query: 315 MKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDT 374
+++A +F E +KG P AVT + L+ L K + + + LE DT
Sbjct: 716 RCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLE-KNIELDT 774
Query: 375 CTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
NTL+ AG L A +++E+M V TY+ ++ ++A +++
Sbjct: 775 VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN 834
Query: 435 LLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIG 494
+ G+ L + Y +M K GK S+A F ++ K+G + T +++
Sbjct: 835 ARRSGLYLDEK-------IYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Query: 495 HCKEGTFEAGY-ELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
C ELL M R D Y +LI + + A +T+ + + I
Sbjct: 888 ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPL 947
Query: 554 TTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
+ S F S+L+ L+K G E+ + E I + ++ + G +KG
Sbjct: 948 SHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGI 1004
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 145/364 (39%), Gaps = 36/364 (9%)
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
V D F + + S+ P +V Y ++ + GK+K A M++ PD V+
Sbjct: 171 VRDFFSWMKLQLSYR--PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVG--CEPDAVAC 226
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
T+L Y L ++ + ++ + + YN ++ L QK +V++ LE
Sbjct: 227 GTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSL---QKKSFHGKVIDLWLE 283
Query: 367 V--GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
+ G P+ T +++ + G EALK F +M P+ TYS ++ GD
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQD 484
+E+A LY+++ +GI+ P +M K KA F + +
Sbjct: 344 WEKAIGLYEDMRSQGIV-------PSNYTCATMLSLYYKTENYPKALSLFADMERNKIPA 396
Query: 485 PTSYKILIIG-HCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
+ LII + K G F + R N D + Y ++ L G + A +
Sbjct: 397 DEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVI 456
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSN 603
+ M+K+ +P S F A +V+L KI QNV + R L
Sbjct: 457 E-MMKTRDIP-LSRF----------------AYIVMLQCYAKI-QNVDCAEEAFRALSKT 497
Query: 604 GLRD 607
GL D
Sbjct: 498 GLPD 501
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S+AL F+ + + G SY +M++I +R + L +++R T + +
Sbjct: 861 SEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCT---DLSTY 917
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+LI+ Y + F E+ K T +K G+ S F+SLL L+K G A+ + +M S
Sbjct: 918 LTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKM-S 976
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPD 265
G++PD+ +++G+ + G F++KM + + D
Sbjct: 977 EAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 3/279 (1%)
Query: 160 DRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
+RF I Y +A + S+++F ++ +S +V + N+LL L AK V+
Sbjct: 116 ERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYI 175
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
EM YG+ PD T+N +I+ FC++ + +M P+ ++ ++ G
Sbjct: 176 EMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAE 235
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
K V+ M K +N V +Y ++ C ++ EA + + M+ G+KPN V
Sbjct: 236 DKSDEVGKVLAMM--KDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTV 293
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
TY+ LI G C ++ K++ + + G PD+ TL+ C G+ AL + ++
Sbjct: 294 TYSHLIHGFCNEDDFEEAKKLFKIMVN-RGCKPDSECYFTLIYYLCKGGDFETALSLCKE 352
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK 438
ME P + LV L E A++L ++ +K
Sbjct: 353 SMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 150/333 (45%), Gaps = 10/333 (3%)
Query: 261 NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNID 320
+C D + ++ V+ + N++ G ++ DL + + ++ Y +D
Sbjct: 75 DCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVL-YAQANMLD 133
Query: 321 EALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTL 380
+L VF ++ + + N L+ + + K V ++ G PD T N +
Sbjct: 134 HSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRM 193
Query: 381 MNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
+ C +G+ + + + +M ++P+S+++ +++ AE DE+ K
Sbjct: 194 IKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGF-------YAEDKSDEVGKVLA 246
Query: 441 LLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT-SYKILIIGHCKEG 499
+++D G V+ Y Q LCK K+ +A+ ++ G + T +Y LI G C E
Sbjct: 247 MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNED 306
Query: 500 TFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFH 559
FE +L +M+ R PDSE Y +LI L + G+ A ++ ++ + VP+ S
Sbjct: 307 DFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMK 366
Query: 560 SILAGLLKKGYAHESASLVVLLLEGKIRQNVTL 592
S++ GL K E+ L+ + E K +NV L
Sbjct: 367 SLVNGLAKDSKVEEAKELIGQVKE-KFTRNVEL 398
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 105 KALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
+A + + +P+M G + ++Y M+++ + + + + + + ++RK +K F
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKG---IKPNSSSF 225
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+I + E K+ MK GV+ V T+N + L KR ++ AK++ D MLS
Sbjct: 226 GLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLS 285
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G+ P+T T++ LI GFC ++ + F+ M + C PD Y TL+ +C+ G +
Sbjct: 286 A-GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFE 344
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEA 322
TA ++ K ++K + P +L+ G ++EA
Sbjct: 345 TALSLCKESMEK--NWVPSFSIMKSLVNGLAKDSKVEEA 381
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ + P T T+N +I GFCK VDD R M+S C PD+VT++TL++G C+A +V
Sbjct: 4 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 63
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ M ++ + + V+YTTL+ G+C ++D A + EM+ G+ P+ +T++ +
Sbjct: 64 GMEIFCEMHRRG--IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM 121
Query: 345 IKGLCEVQKIDKIKEVLE 362
+ GLC +++ K +LE
Sbjct: 122 LAGLCSKKELRKAFAILE 139
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEAL 323
P +TYN+++DG C+ +V A ++ M K +PDVV+++TL+ GYC + +D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG--CSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 324 VVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG 383
+F EM +G+ N VTY TLI G C+V +D +++L + G +PD T + ++ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC-GVAPDYITFHCMLAG 124
Query: 384 HCNAGNLNEALKVFEKM 400
C+ L +A + E +
Sbjct: 125 LCSKKELRKAFAILEDL 141
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Query: 191 VSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDG 250
+ P+ +T+NS++ K+ R + AK + D M S G +PD TF+ LI G+CK VD+G
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 251 FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLL 310
F +M + VTY TL+ G C+ G + A +++ M+ S + PD +++ +L
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI--SCGVAPDYITFHCML 122
Query: 311 RGYCMKQNIDEALVVFEEM 329
G C K+ + +A + E++
Sbjct: 123 AGLCSKKELRKAFAILEDL 141
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
P +TYN++I G C+ ++D K +L+ ++ G SPD T +TL+NG+C A ++ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLD-SMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
+F +M + ++ TY+ L+ C +GD + A+ L +E++ G+ P +
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV-------APDYITFH 119
Query: 456 SMFQFLCKNGKTSKA 470
M LC + KA
Sbjct: 120 CMLAGLCSKKELRKA 134
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NS+I + + ++ ++ SM S G SP VVTF++L+ K R + +F EM
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM- 71
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G+ +T T+ LI GFC+ +D +M S PD +T++ ++ G+C ++
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 283 KTAHNVVKGMVKKSED 298
+ A +++ + +KSED
Sbjct: 132 RKAFAILEDL-QKSED 146
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYEL 507
P Y SM CK + A+R + +G + D ++ LI G+CK + G E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
M RR ++ Y +LI G Q G+ A L +M+ + P TFH +LAGL
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 568 K 568
K
Sbjct: 128 K 128
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQ 459
M+ W + P + TY+ ++ C + A+++ D + KG +P V + ++
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-------CSPDVVTFSTLIN 53
Query: 460 FLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
CK + F ++ +RG + +Y LI G C+ G +A +LL M+ P
Sbjct: 54 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 113
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS 549
D + ++ GL K E A+ L+ + KS
Sbjct: 114 DYITFHCMLAGLCSKKELRKAFAILEDLQKS 144
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 207/449 (46%), Gaps = 65/449 (14%)
Query: 132 LGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGV 191
L R +N AR F S++ K+ G+ +NS++ Y GL +E+ +LF M
Sbjct: 27 LSRIGKINEARKFFDSLQFKAIGS-------WNSIVSGYFSNGLPKEARQLFDEMSE--- 76
Query: 192 SPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGF 251
+VV++N L+ +K A++VF+ M + ++ +++G+ + MV +
Sbjct: 77 -RNVVSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAMVKGYMQEGMVGEAE 130
Query: 252 RFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNP--DVVSYTTL 309
F +M N V++ + G+ G++ A +K D+ P DVV+ T +
Sbjct: 131 SLFWRMPERN----EVSWTVMFGGLIDDGRIDKA--------RKLYDMMPVKDVVASTNM 178
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID---KIKEVLEGALE 366
+ G C + +DEA ++F+EM ++ N VT+ T+I G + ++D K+ EV+ E
Sbjct: 179 IGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE 234
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
V + +++ G+ +G + +A + FE M ++P A +++V +G+
Sbjct: 235 V--------SWTSMLLGYTLSGRIEDAEEFFEVM---PMKPVIACNAMIV-GFGEVGEIS 282
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT 486
+A +++D L+ D + A ++ M + + G +A F Q+ K+G +
Sbjct: 283 KARRVFD-------LMEDRDN----ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 487 SYKILIIGHCKE-GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
I I+ C + + G ++ ++R FD D + L+ ++ GE + A +
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHES 574
I+ ++SI++G G E+
Sbjct: 392 FSSKDII----MWNSIISGYASHGLGEEA 416
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 125/309 (40%), Gaps = 36/309 (11%)
Query: 160 DRF-------FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
DRF +NS+I Y GL +E++K+F M S G P+ VT ++L G+
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLE 449
Query: 213 MAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTL 272
+F+ M S + V P ++ + + VD + M+ PD + L
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT---IKPDATVWGAL 506
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY-CMKQNIDEALVVFEEM-- 329
+ G C K + ++ + KK + PD LL + + VV + M
Sbjct: 507 L-GAC---KTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRT 562
Query: 330 -----------VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
++ G K + T IK E I + E +G L G+SPD +
Sbjct: 563 NNVSKFPGCSWIEVGKKVHMFTRGG-IKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVL 621
Query: 379 TLMNGHCNAGNL---NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
++ +L +E L V +++ P+ V+ +NL GD A KL ++
Sbjct: 622 HDVDEEEKVDSLSRHSERLAVAYGLLK---LPEGVPIRVM-KNLRVCGDCHAAIKLISKV 677
Query: 436 LKKGILLRD 444
++ I+LRD
Sbjct: 678 TEREIILRD 686
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 109/274 (39%), Gaps = 72/274 (26%)
Query: 158 LEDR---FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL-----LILLKRG 209
+EDR + +I++Y R G E++ LF M+ GV PS + S+L L L+ G
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 210 R---TNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDI 266
R ++ + FD+ D Y ++L+ + K + F + SS
Sbjct: 351 RQVHAHLVRCQFDD---------DVYVASVLMTMYVKCGELVKAKLVFDRFSS------- 394
Query: 267 VTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVF 326
D++ + +++ GY +EAL +F
Sbjct: 395 ----------------------------------KDIIMWNSIISGYASHGLGEEALKIF 420
Query: 327 EEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD----TCTLNTLMN 382
EM G PN VT ++ K+++ E+ E +P +CT++ L
Sbjct: 421 HEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML-- 478
Query: 383 GHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
AG +++A+++ E M ++PD+ + L+
Sbjct: 479 --GRAGQVDKAMELIESM---TIKPDATVWGALL 507
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 38/270 (14%)
Query: 170 YGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP 229
YGRA + S++ F +++ + +V + N+LL L A V+ EM YG+
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGI-- 178
Query: 230 DTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVV 289
+PD+ TYN ++ +C +G +++++V
Sbjct: 179 ---------------------------------EPDLETYNRMIRVLCESGSTSSSYSIV 205
Query: 290 KGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLC 349
M +K + P S+ ++ G+ ++ DE V M + G+ TYN +I+ LC
Sbjct: 206 AEMERKW--IKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 350 EVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDS 409
+ +K + K +++G + P++ T + L++G C+ NL+EA+ +FE M+ +PDS
Sbjct: 264 KRKKSAEAKALIDGVMSCR-MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDS 322
Query: 410 ATYSVLVRNLCHIGDFERAEKLYDELLKKG 439
Y L+ LC GDFE A L E ++K
Sbjct: 323 ECYFTLIHCLCKGGDFETALILCRESMEKN 352
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 145/332 (43%), Gaps = 16/332 (4%)
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRG---YCMKQNIDE 321
D + ++ V + R ++ G ++ PD S + +R Y +D
Sbjct: 74 DRIIFSVAVVTLAREKHFVAVSQLLDGFIQN----QPDPKSESFAVRAIILYGRANMLDR 129
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLM 381
++ F + + + N L+ + + V ++ G PD T N ++
Sbjct: 130 SIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMI 189
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
C +G+ + + + +M ++P +A++ ++ I F + EK +DE+ K +
Sbjct: 190 RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM------IDGFYKEEK-FDEVRKVMRM 242
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK-RGTQDPTSYKILIIGHCKEGT 500
+ + G VA Y M Q LCK K+++A+ +M R + +Y +LI G C E
Sbjct: 243 MDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEEN 302
Query: 501 FEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHS 560
+ L +M+ + PDSE Y +LI L + G+ A ++ ++ + VP+ S
Sbjct: 303 LDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKW 362
Query: 561 ILAGLLKKGYAHESASLVVLLLEGKIRQNVTL 592
++ GL + E+ L+ ++ E K +NV L
Sbjct: 363 LVNGLASRSKVDEAKELIAVVKE-KFTRNVDL 393
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 113 LPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYG 171
+P+M G + ++Y M+ +L + + + + + + ++RK +K F +I +
Sbjct: 172 MPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERK---WIKPTAASFGLMIDGFY 228
Query: 172 RAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDT 231
+ F E K+ M GV V T+N ++ L KR ++ AK++ D ++S + P++
Sbjct: 229 KEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSC-RMRPNS 287
Query: 232 YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKG 291
T+++LI GFC +D+ F+ M PD Y TL+ +C+ G +TA + +
Sbjct: 288 VTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRE 347
Query: 292 MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEA 322
++K + P L+ G + +DEA
Sbjct: 348 SMEK--NWVPSFSVMKWLVNGLASRSKVDEA 376
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 126/249 (50%), Gaps = 9/249 (3%)
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMK---SVGVSPSVVTFNSLLLILLKRGRTNMAK 215
+ R + +L++ Y + G ++ ++ +M+ P VT+ +++ + G + A+
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS-SFNCDPDIVTYNTLVD 274
V EM + GV + T+N+L++G+CK +D ++M+ +PD+V+YN ++D
Sbjct: 473 QVLAEM-ARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 275 GVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV-DKG 333
G A M ++ + P +SYTTL++ + M A VF+EM+ D
Sbjct: 532 GCILIDDSAGALAFFNEM--RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+K + + +N L++G C + I+ + V+ E GF P+ T +L NG A +A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKE-NGFYPNVATYGSLANGVSQARKPGDA 648
Query: 394 LKVFEKMME 402
L +++++ E
Sbjct: 649 LLLWKEIKE 657
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 48/301 (15%)
Query: 264 PDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLN--PDVVSYTTLLRGYCMKQNIDE 321
PD Y TL+ G + G+V +++ M ++ +D N PD V+YTT++ + +D
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAM-RRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLM 381
A V EM G+ N +TYN L+KG C+ +ID+ +++L E G PD + N ++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
+G + AL F +M + P +Y+ L++ G + A +++DE++
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND--- 587
Query: 442 LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTF 501
R D ++ +L+ G+C+ G
Sbjct: 588 -------------------------------------PRVKVDLIAWNMLVEGYCRLGLI 610
Query: 502 EAGYELLVLMLRRNFDPDSEIYQSLIDGLLQ---KGEPLLAYQTLQK--MLKSSIVPTTS 556
E ++ M F P+ Y SL +G+ Q G+ LL ++ +++ +K P+ S
Sbjct: 611 EDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDS 670
Query: 557 T 557
+
Sbjct: 671 S 671
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 147/322 (45%), Gaps = 28/322 (8%)
Query: 113 LPQMGFTHNDQSYF-LMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYG 171
LP++ F + + Y LM + R + AR L +++R+ + ++ + +++ ++
Sbjct: 406 LPKV-FAPDSRIYTTLMKGYMKNGRVADTAR-MLEAMRRQDDRNSHPDEVTYTTVVSAFV 463
Query: 172 RAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDT 231
AGL + ++ M +GV + +T+N LL K+ + + A+ + EM G+ PD
Sbjct: 464 NAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDV 523
Query: 232 YTFNILIRGFCKNSMVDD---GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
++NI+I G ++DD FF +M + P ++Y TL+ +G+ K A+ V
Sbjct: 524 VSYNIIIDGCI---LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRV 580
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
M+ + D++++ L+ GYC I++A V M + G PN TY +L G+
Sbjct: 581 FDEMMNDPR-VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGV 639
Query: 349 CEVQK-------IDKIKEVL-----EGALEVGG------FSPDTCTLNTLMNGHCNAGNL 390
+ +K +IKE E + PD L+TL + A
Sbjct: 640 SQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFF 699
Query: 391 NEALKVFEKMMEWKVQPDSATY 412
+AL++ M E + P+ Y
Sbjct: 700 KKALEIIACMEENGIPPNKTKY 721
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 179 SVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILI 238
++ F M++ G++P+ +++ +L+ G+ +A VFDEM++ V D +N+L+
Sbjct: 542 ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLV 601
Query: 239 RGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM-----V 293
G+C+ +++D R +M P++ TY +L +GV +A K A + K + V
Sbjct: 602 EGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAV 661
Query: 294 KKSED------------LNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
KK E L PD TL +AL + M + G+ PN Y
Sbjct: 662 KKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKY 721
Query: 342 NTL 344
+
Sbjct: 722 KKI 724
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 322 ALVVFEEMVDKGLKPNAVTYNTLIKGLCE-------------VQKIDKIKEVLEGALEVG 368
A+ V + M+ G P+ + + L + ++K + +L VG
Sbjct: 172 AVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSL-VG 230
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
PDT N ++N N G+ ++ K+FE+M EW +PD TY+V+++ +G E
Sbjct: 231 QSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELI 290
Query: 429 EKLYDELLKKGILLRDDGSTPLVAAY 454
+ + ++ KGI + LVAAY
Sbjct: 291 VFVLERIIDKGIKVCMTTMHSLVAAY 316
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 161/417 (38%), Gaps = 56/417 (13%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
PD ++ +L + D+ +FEEM + +P+ +TYN +IK V + + I V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
LE ++ G T+++L+ + G+L A ++ + M E + R+LC
Sbjct: 294 LERIID-KGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKR------------RDLC 340
Query: 421 HI--------------GDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
+ + E E +++ G RD+ S V +F+ L N
Sbjct: 341 KVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVV---DVFKKLLPNSV 397
Query: 467 TSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLR---RNFDPDSEIY 523
E L K D Y L+ G+ K G +L M R RN PD Y
Sbjct: 398 DPSGEPPL--LPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTY 455
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLE 583
+++ + G A Q L +M + + T++ +L G K+ + L+ + E
Sbjct: 456 TTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE 515
Query: 584 GK------------IRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIF 631
I + + L F N +R +G + Y MK
Sbjct: 516 DAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKI----SYTTLMKAFA-- 569
Query: 632 LSQSRKLLEANKLLLFCL-EKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+S KL AN++ + + +D+ N ++EG C++ + +A + + E G
Sbjct: 570 MSGQPKL--ANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 624
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 163/369 (44%), Gaps = 37/369 (10%)
Query: 158 LEDRFF--NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
LED F N+++ Y G E+ ++F M + VV +NS+++ K G + A+
Sbjct: 157 LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
++FDEM GV ++N +I GF +N D F++M + PD T +L++
Sbjct: 213 NLFDEMPQRNGV-----SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
G + + + +V+ +LN VV T L+ YC I+E L VFE K L
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVV--TALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 336 PNAVTYNTLIKGLC----EVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
+N++I GL E + +D E LE G PD+ + ++ ++G ++
Sbjct: 326 ----CWNSMILGLANNGFEERAMDLFSE-----LERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 392 EALKVFEKMME-WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
A + F M E + ++P Y+++V L G E AE L K + + +D
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI-----KNMPVEED----- 426
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVL 510
+ S+ K G A+R + L K + Y +L + G FE E +L
Sbjct: 427 TVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLL 486
Query: 511 MLRRNFDPD 519
M R + +
Sbjct: 487 MKERQMEKE 495
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 150/352 (42%), Gaps = 24/352 (6%)
Query: 230 DTYTFNILIRGFCKNSMVDDGFRFFQKM--SSFNCDPDIVTYNTLVDGVCRAGKVKTAHN 287
+ + +N +IRGF ++S + F M SS + P +TY ++ R G+ +
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 288 VVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKG 347
+ GMV K E L D T+L Y + EA +F M+ + V +N++I G
Sbjct: 148 L-HGMVIK-EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAWNSMIMG 201
Query: 348 LCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQP 407
+ ID+ + + + + G S N++++G G +AL +F +M E V+P
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVS-----WNSMISGFVRNGRFKDALDMFREMQEKDVKP 256
Query: 408 DSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKT 467
D T L+ ++G E+ +++ +++ L T L+ Y CK G
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMY-------CKCGCI 309
Query: 468 SKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
E G + + + +I+G G E +L + R +PDS + ++
Sbjct: 310 ---EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366
Query: 528 DGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLL-KKGYAHESASLV 578
GE A + + M + ++ + ++++ +L G E+ +L+
Sbjct: 367 TACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI 418
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 161/381 (42%), Gaps = 63/381 (16%)
Query: 197 TFNSLLLILLKRGRTNMAKSVFDEML-STYGVAPDTYTFNILIRG--------------- 240
+N+++ + MA S+F +ML S+ V P T+ + +
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 241 -----------FCKNSMVD---------DGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
F +N+M+ + +R F M F D+V +N+++ G + G
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAWNSMIMGFAKCG 206
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ A N+ M ++ + VS+ +++ G+ +AL +F EM +K +KP+ T
Sbjct: 207 LIDQAQNLFDEMPQR------NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFT 260
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+L+ + ++ + + E + F ++ + L++ +C G + E L VFE
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVR-NRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
+ ++ + ++ ++ L + G ERA L+ EL + G+ P ++ +
Sbjct: 320 PKKQL----SCWNSMILGLANNGFEERAMDLFSELERSGL-------EPDSVSFIGVLTA 368
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
+G+ +A+ FR + ++ +P+ Y +++ G E E L+ +
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLE---EAEALIKNMPVEE 425
Query: 519 DSEIYQSLIDGLLQKGEPLLA 539
D+ I+ SL+ + G +A
Sbjct: 426 DTVIWSSLLSACRKIGNVEMA 446
>AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30148738-30149931 FORWARD
Length = 397
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 132/272 (48%), Gaps = 3/272 (1%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F +I YG+AG+ ++++ F +M G SV +FN+ L +L + +
Sbjct: 108 FIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDA 167
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
S YG+ D +FNI I+ FC+ ++D + ++M PD+VTY TL+ + + +
Sbjct: 168 PSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHER 227
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ + MV K P++ ++ ++ ++ +A + M ++P+++TY
Sbjct: 228 CVIGNGLWNLMVLKG--CKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITY 285
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
N +IKG + + + E + A+ G+ P+ T+++ C AGN + A + + M
Sbjct: 286 NMVIKGFF-LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCM 344
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
K P+ T +L++ L G ++A+ + +
Sbjct: 345 RKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
D S+ I I C+ G + Y + M + PD Y +LI L + ++
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSN 603
M+ P +TF+ + L+ + A ++ L++L+ + ++ + ++ F
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 604 GLRDKGFRIVGLLYDNGYMVDMK---ELIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMC 660
D R+ ++ GY ++K +I +L ++ A + C+ K ++D
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 661 NTVIEGLCKMKKLSEA 676
+++GL K +L +A
Sbjct: 356 EMLLKGLVKKGQLDQA 371
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 115/537 (21%), Positives = 202/537 (37%), Gaps = 142/537 (26%)
Query: 156 VKLEDR-FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTF---------------- 198
VK+E F+N L+ ++G F S+ LF M S GV TF
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 199 -------------------NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIR 239
NSL+ LK R + A+ VFDEM D ++N +I
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM-----TERDVISWNSIIN 269
Query: 240 GFCKNSMVDDGFRFFQKMSSFNCDPDIVTY------------------------------ 269
G+ N + + G F +M + D+ T
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 270 -----NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
NTL+D + G + +A V + M +S VVSYT+++ GY + EA+
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS------VVSYTSMIAGYAREGLAGEAVK 383
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG-GFS------------ 371
+FEEM ++G+ P+ T ++ + +D+ K V E E GF
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
Query: 372 -----------------PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK-VQPDSATYS 413
D + NT++ G+ NEAL +F ++E K PD T +
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGI------------------------LLRDDGSTP 449
++ + F++ +++ +++ G +L DD ++
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELL 508
+ ++ M +G +A F Q+ + G + D S+ L+ G + G+
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623
Query: 509 VLMLRR-NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAG 564
+M +P E Y ++D L + G+ + AY+ ++ M I P + + ++L G
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM---PIPPDATIWGALLCG 677
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 183/463 (39%), Gaps = 76/463 (16%)
Query: 170 YGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP 229
Y G +E+ ++F +K + +N L+ L K G + + +F +M+S+ GV
Sbjct: 139 YTNCGDLKEASRVFDEVKI----EKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEM 193
Query: 230 DTYTFNILIRGFCKNSMVDDGFRF--FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHN 287
D+YTF+ + + F V G + F S F + N+LV + +V +A
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV--GNSLVAFYLKNQRVDSARK 251
Query: 288 VVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKG 347
V M ++ DV+S+ +++ GY ++ L VF +M+ G++ + T ++ G
Sbjct: 252 VFDEMTER------DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 348 LCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQP 407
C ++ + + FS + NTL++ + G+L+ A VF +M
Sbjct: 306 -CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM------- 357
Query: 408 DSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKT 467
S V +Y SM + G
Sbjct: 358 ---------------------------------------SDRSVVSYTSMIAGYAREGLA 378
Query: 468 SKAERGFRQLMKRGTQDPTSYKILIIGHC--KEGTFEAGYELLVLMLRRNFDPDSEIYQS 525
+A + F ++ + G P Y + + +C + + G + + + D + +
Sbjct: 379 GEAVKLFEEMEEEGIS-PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 526 LIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGK 585
L+D + G A +M I+ ++++I+ G K YA+E+ SL LLLE K
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDII----SWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 586 IRQNVTLSTHTVRLLF----SNGLRDKGFRIVGLLYDNGYMVD 624
+ TV + S DKG I G + NGY D
Sbjct: 494 ---RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 191/432 (44%), Gaps = 66/432 (15%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
++ SL+ Y + G E+ LF M ++VT N++L +K R N A ++F EM
Sbjct: 79 YWTSLLSKYAKTGYLDEARVLFEVMPE----RNIVTCNAMLTGYVKCRRMNEAWTLFREM 134
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ ++ +++ C + +D F +M N +V++NTLV G+ R G
Sbjct: 135 ------PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN----VVSWNTLVTGLIRNGD 184
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
++ A V M + DVVS+ +++GY ++EA ++F +M +K N VT+
Sbjct: 185 MEKAKQVFDAMPSR------DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTW 234
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
+++ G C + ++E E+ + + +++G EAL +F +M
Sbjct: 235 TSMVYGYC---RYGDVREAYRLFCEMP--ERNIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 402 E--WKVQPDSATYSVLVRNLCHIG-DFER-AEKLYDELLKKGILLRD-DG---------- 446
+ V P+ T L +G +F R E+L+ +++ G D DG
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 447 -STPLVAAYKSMF--------------QFLCKNGKTSKAERGFRQLMKRGTQDPTSYKIL 491
S+ L+A+ +S+ ++L KNG +AE F ++ + D S+ +
Sbjct: 350 ASSGLIASAQSLLNESFDLQSCNIIINRYL-KNGDLERAETLFERV--KSLHDKVSWTSM 406
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
I G+ + G + L ++ D D + +I GL+Q A L M++ +
Sbjct: 407 IDGYLEAGDVSRAFGL----FQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGL 462
Query: 552 VPTTSTFHSILA 563
P ST+ +L+
Sbjct: 463 KPLNSTYSVLLS 474
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 153/349 (43%), Gaps = 34/349 (9%)
Query: 152 SNG--TVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
SNG TV + R SL+ Y +GL + L S + + N ++ LK G
Sbjct: 329 SNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNG 382
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
A+++F+ + S + D ++ +I G+ + V F FQK+ D D VT+
Sbjct: 383 DLERAETLFERVKSLH----DKVSWTSMIDGYLEAGDVSRAFGLFQKLH----DKDGVTW 434
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEA--LVVFE 327
++ G+ + A +++ MV+ L P +Y+ LL N+D+ +
Sbjct: 435 TVMISGLVQNELFAEAASLLSDMVRCG--LKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
P+ + N+L+ + I+ E+ ++ DT + N+++ G +
Sbjct: 493 AKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ-----KDTVSWNSMIMGLSHH 547
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS 447
G ++AL +F++M++ +P+S T+ ++ H G R +L+ + +K+ ++
Sbjct: 548 GLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELF-KAMKETYSIQ---- 602
Query: 448 TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHC 496
P + Y SM L + GK +AE L T D T Y L +G C
Sbjct: 603 -PGIDHYISMIDLLGRAGKLKEAEEFISAL--PFTPDHTVYGAL-LGLC 647
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE 362
VV +T+LL Y +DEA V+FE M ++ N VT N ++ G + +++++ +
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLTGYVKCRRMNEAWTLFR 132
Query: 363 GALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHI 422
+ + ++ C+ G +A+++F++M E V +++ LV L
Sbjct: 133 ------EMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV----VSWNTLVTGLIRN 182
Query: 423 GDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT 482
GD E+A++++D + RD V ++ +M + +N +A+ F + ++
Sbjct: 183 GDMEKAKQVFDAMPS-----RD------VVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 483 QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNF 516
TS ++ G+C+ G Y L M RN
Sbjct: 232 VTWTS---MVYGYCRYGDVREAYRLFCEMPERNI 262
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 215/514 (41%), Gaps = 86/514 (16%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF- 163
KA + F +P+ N SY M+ RA + A FL++ VK D
Sbjct: 131 KAYELFCDIPE----KNAVSYATMITGFVRAGRFDEAE-FLYA-----ETPVKFRDSVAS 180
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N L+ Y RAG + E+V++F M VV+ +S++ K GR A+S+FD M
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGM----AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE 236
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSS--------------FNCDPDIVTY 269
+ T+ +I G+ K +DGF F +M F D V Y
Sbjct: 237 R-----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRY 291
Query: 270 ----------------------NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
N+L+ + G + A V G++K N D VS+
Sbjct: 292 REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF-GVMK-----NKDSVSWN 345
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
+L+ G ++ I EA +FE+M K + V++ +IKG +I K +E+
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISK-------CVEL 394
Query: 368 GGFSP--DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
G P D T +++ + G EAL F KM++ +V P+S T+S ++ + D
Sbjct: 395 FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 426 ERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP 485
+++ ++K I+ LV+ Y CK G T+ A + F + + +
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMY-------CKCGNTNDAYKIFSCISE---PNI 504
Query: 486 TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQK 545
SY +I G+ G + +L ++ +P+ + +L+ + G L ++ +
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 546 MLKS-SIVPTTSTFHSILAGLLKKGYAHESASLV 578
M S +I P + ++ L + G ++++L+
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLI 598
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 175/429 (40%), Gaps = 63/429 (14%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
NS I + R G QE+ +F M + S+V++ +++ + G+ + A VFDEM
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSN----RSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCD---PDIVTYNTLVDGVCRAG 280
T ++N +I KN D G K CD + V+Y T++ G RAG
Sbjct: 110 RV-----TTSYNAMITAMIKNK-CDLG-----KAYELFCDIPEKNAVSYATMITGFVRAG 158
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ A + K D V+ LL GY +EA+ VF+ M K V+
Sbjct: 159 RFDEAEFLYAETPVKFR----DSVASNVLLSGYLRAGKWNEAVRVFQGMAVK----EVVS 210
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
++++ G C++ +I + + + E + T +++G+ AG + +F +M
Sbjct: 211 CSSMVHGYCKMGRIVDARSLFDRMTE-----RNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 401 -MEWKVQPDSATYSVLVRNLCHIGDFERAEKL----------YDELLKKGIL-----LRD 444
E V+ +S T +V+ + + ++ +D L ++ L
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 445 DGSTPLV---------AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGH 495
G V ++ S+ L + + S+A F ++ + D S+ +I G
Sbjct: 326 MGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK---DMVSWTDMIKGF 382
Query: 496 CKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTT 555
+G EL +M + D+ + ++I + G A KML+ + P +
Sbjct: 383 SGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 556 STFHSILAG 564
TF S+L+
Sbjct: 439 YTFSSVLSA 447
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 27/346 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ +I+ + G + V+LF M +T+ +++ + G A F +ML
Sbjct: 375 WTDMIKGFSGKGEISKCVELFGMMPE----KDNITWTAMISAFVSNGYYEEALCWFHKML 430
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
V P++YTF+ ++ + + +G + ++ N D+ N+LV C+ G
Sbjct: 431 QK-EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNT 489
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A+ + + + P++VSY T++ GY +AL +F + G +PN VT+
Sbjct: 490 NDAYKIFSCISE------PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFL 543
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
L+ V +D + + P +++ +G L++A + M
Sbjct: 544 ALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM-- 601
Query: 403 WKVQPDSATY-SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
+P S + S+L + H+ R + L + KK I L D +TP V + Q
Sbjct: 602 -PCKPHSGVWGSLLSASKTHL----RVD-LAELAAKKLIELEPDSATPYVV----LSQLY 651
Query: 462 CKNGKTSKAERGFR-QLMKRGTQDPTSYKILIIGHCKEGTFEAGYE 506
GK +R + KR +DP S I++ G F AG E
Sbjct: 652 SIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVH--NFLAGDE 695
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 169/422 (40%), Gaps = 72/422 (17%)
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
L T + + N I +N + + F++MS + IV++ ++ GK
Sbjct: 41 LETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMS----NRSIVSWIAMISAYAENGK 96
Query: 282 VKTAHNVVKGM-VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
+ A V M V+ + N + T +++ C ++ +A +F ++ +K NAV+
Sbjct: 97 MSKAWQVFDEMPVRVTTSYNAMI---TAMIKNKC---DLGKAYELFCDIPEK----NAVS 146
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
Y T+I G + D+ E L V D+ N L++G+ AG NEA++VF+ M
Sbjct: 147 YATMITGFVRAGRFDE-AEFLYAETPVK--FRDSVASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL------------------- 441
+V + S +V C +G A L+D + ++ ++
Sbjct: 204 AVKEV----VSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGF 259
Query: 442 -----LRDDG-----STPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKIL 491
+R +G S L +K+ F+ R Q+ ++ P + +
Sbjct: 260 GLFLRMRQEGDVKVNSNTLAVMFKACRDFV--------RYREGSQIHGLVSRMPLEFDLF 311
Query: 492 IIGHCKEGTFEAGY---ELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
+ + GY V + +N DS + SLI GL+Q+ + AY+ +KM
Sbjct: 312 LGNSLMSMYSKLGYMGEAKAVFGVMKN--KDSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 549 SSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDK 608
+V T ++ G KG + L ++ E + N+T T + SNG ++
Sbjct: 370 KDMVSWT----DMIKGFSGKGEISKCVELFGMMPE---KDNITW-TAMISAFVSNGYYEE 421
Query: 609 GF 610
Sbjct: 422 AL 423
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 22/197 (11%)
Query: 129 LEILGRARNLNVA-----RNFLFSIKRKSNGTVKLEDRF----------FNSLIRSYGRA 173
L+I GR +N+ +N L S+ K T F +N++I Y
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517
Query: 174 GLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYT 233
G ++++KLF+ ++S G P+ VTF +LL + G ++ F M S+Y + P
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
+ ++ ++ ++DD +S+ C P + +L+ A K ++ +
Sbjct: 578 YACMVDLLGRSGLLDDASNL---ISTMPCKPHSGVWGSLLS----ASKTHLRVDLAELAA 630
Query: 294 KKSEDLNPDVVSYTTLL 310
KK +L PD + +L
Sbjct: 631 KKLIELEPDSATPYVVL 647
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 171/390 (43%), Gaps = 30/390 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ S+IR + LF +++ F M++ G P F S+L + T M F E +
Sbjct: 73 WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVL-----KSCTMMMDLRFGESV 127
Query: 223 STY----GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
+ G+ D YT N L+ + K +D R F+ M D+V+YNT++ G +
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPR----KDVVSYNTIIAGYAQ 183
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
+G + A +V+ M + DL PD + +++L + ++ + + ++ KG+ +
Sbjct: 184 SGMYEDALRMVREM--GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDV 241
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
++L+ + +I+ + V + D + N+L+ G+ G NEAL++F
Sbjct: 242 YIGSSLVDMYAKSARIEDSERVFSRL-----YCRDGISWNSLVAGYVQNGRYNEALRLFR 296
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+M+ KV+P + +S ++ H+ ++L+ +L+ G GS +A+ ++
Sbjct: 297 QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF-----GSNIFIAS--ALV 349
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
K G A + F ++ D S+ +I+GH G L M R+ P
Sbjct: 350 DMYSKCGNIKAARKIFDRM---NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 406
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLK 548
+ + +++ G A+ M K
Sbjct: 407 NQVAFVAVLTACSHVGLVDEAWGYFNSMTK 436
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 45/274 (16%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NSL+ Y + G + E+++LF M + V P V F+S++ ++ K + +L
Sbjct: 275 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 334
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
RG GF +I + LVD + G +
Sbjct: 335 ----------------RG---------GF-----------GSNIFIASALVDMYSKCGNI 358
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K A + M E VS+T ++ G+ + + EA+ +FEEM +G+KPN V +
Sbjct: 359 KAARKIFDRMNVLDE------VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFV 412
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
++ V +D+ +V G + + + + AG L EA KM
Sbjct: 413 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC- 471
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELL 436
V+P + +S L+ + + E AEK+ +++
Sbjct: 472 --VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 503
>AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:644458-648421 REVERSE
Length = 852
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 157/331 (47%), Gaps = 33/331 (9%)
Query: 107 LKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR-KSNGTVKLEDRFFNS 165
LK + + + T + SY ++L+ A +++A++ KR +S+G +KL+ + +
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT 379
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
+I+ + A +++ ++K+ MKSVGV+P+ T++SL+ G A +F+EML++
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLAS- 438
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
G P++ FNIL+ + D FR FQ + V + D + G+ ++
Sbjct: 439 GCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSS-----VNESLYADDIVSKGRT-SS 492
Query: 286 HNVVK-----GMVKKSED-----------LNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
N++K +V ++ + P +Y LL+ + L+ +EM
Sbjct: 493 PNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELM--DEM 550
Query: 330 VDKGLKPNAVTYNTLIK---GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCN 386
GL PN +T++TLI G +V+ +I + A G PD T +
Sbjct: 551 KSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSA----GTRPDVVAYTTAIKICAE 606
Query: 387 AGNLNEALKVFEKMMEWKVQPDSATYSVLVR 417
L A +FE+M ++++P+ TY+ L++
Sbjct: 607 NKCLKLAFSLFEEMRRYQIKPNWVTYNTLLK 637
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 139/321 (43%), Gaps = 38/321 (11%)
Query: 90 KTTGFQVLRLIKVPSKALKFFNW-------LPQMGFTHNDQSYFLMLEILGRARNLNVAR 142
K F +IKV + A K + W + +G T N ++ ++ A + A
Sbjct: 371 KLDAFTYCTIIKVFADA-KMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQA- 428
Query: 143 NFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL 202
N LF S + + FN L+ + A + + +LF S K V+ S+ +
Sbjct: 429 NHLFEEMLASG--CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD--- 483
Query: 203 LILLKRGRTNM----------------AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSM 246
++ +GRT+ + S + + + P T T+NIL++ C
Sbjct: 484 --IVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDY 540
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
G +M S P+ +T++TL+D +G V+ A +++ M S PDVV+Y
Sbjct: 541 YR-GKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTM--HSAGTRPDVVAY 597
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLE--GA 364
TT ++ + + A +FEEM +KPN VTYNTL+K + + ++++ L
Sbjct: 598 TTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQD 657
Query: 365 LEVGGFSPDTCTLNTLMNGHC 385
+ G+ P+ L L+ C
Sbjct: 658 MRNAGYKPNDHFLKELIEEWC 678
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 27/282 (9%)
Query: 298 DLNPDVVSYTTLLRGYCMKQNIDEALVVFEE---MVDKGL-KPNAVTYNTLIKGLCEVQK 353
D+ D+ SY LL+ C+ +D A +++E M GL K +A TY T+IK + K
Sbjct: 330 DVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADA-K 388
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
+ K ++ ++ G +P+T T ++L++ NAG + +A +FE+M+ +P+S ++
Sbjct: 389 MWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFN 448
Query: 414 VLVRNLCHIGDFERAEKLY---------DELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
+L+ ++RA +L+ + L I+ + S+P L N
Sbjct: 449 ILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSP---------NILKNN 499
Query: 465 GKTSKAERG----FRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
G S R + Q KR PT+ I+ + G EL+ M P+
Sbjct: 500 GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQ 559
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL 562
+ +LID G+ A + L+ M + P + + +
Sbjct: 560 ITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAI 601
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 193 PSVVTFNSLLLILLKRGRTNM--AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDG 250
P+ T+N ILLK T+ K + DEM S G++P+ T++ LI + V+
Sbjct: 524 PTTATYN----ILLKACGTDYYRGKELMDEMKS-LGLSPNQITWSTLIDMCGGSGDVEGA 578
Query: 251 FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK-VKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
R + M S PD+V Y T + +C K +K A ++ + M + + P+ V+Y TL
Sbjct: 579 VRILRTMHSAGTRPDVVAYTTAIK-ICAENKCLKLAFSLFEEM--RRYQIKPNWVTYNTL 635
Query: 310 LRG---YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE 350
L+ Y + + L ++++M + G KPN LI+ CE
Sbjct: 636 LKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 143/323 (44%), Gaps = 18/323 (5%)
Query: 152 SNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRT 211
SN V+ F +LI RAG ++ + ++S V P V FN+L+ + G
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 212 NMAKSVFDEMLS-TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYN 270
+ A V EM + T+ + PD + L++ C V+ +Q + + Y
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYT 648
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
V+ ++G A ++ K M K +D+ PD V ++ L+ + +DEA + ++
Sbjct: 649 IAVNSCSKSGDWDFACSIYKDM--KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
+G++ ++Y++L+ C + K E+ E + P T+N L+ C L
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIK-LRPTISTMNALITALCEGNQL 765
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP- 449
+A++ +++ ++P++ TYS+L+ DFE + KL + + DG +P
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQ-------AKGDGVSPN 818
Query: 450 ------LVAAYKSMFQFLCKNGK 466
+ + K F+ C G+
Sbjct: 819 LIMCRCITSLCKRRFEKACAGGE 841
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 174/409 (42%), Gaps = 51/409 (12%)
Query: 190 GVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDD 249
G++ + +L+ K G+ + VF +M S GV + +TF LI G + V
Sbjct: 497 GMTADCKLYTTLISSCAKSGKVDAMFEVFHQM-SNSGVEANLHTFGALIDGCARAGQVAK 555
Query: 250 GFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
F + + S N PD V +N L+ ++G V A +V+ M ++ ++PD +S L
Sbjct: 556 AFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGAL 615
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL---------CEVQKIDKIKEV 360
++ C ++ A V++ + G++ Y + C + K K K+V
Sbjct: 616 MKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDV 675
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
+PD + L++ +A L+EA + + ++ + +YS L+ C
Sbjct: 676 ----------TPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACC 725
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKR 480
+ D+++A +LY+++ K I LR P ++ ++ LC+ + KA ++
Sbjct: 726 NAKDWKKALELYEKI--KSIKLR-----PTISTMNALITALCEGNQLPKAMEYLDEIKTL 778
Query: 481 GTQDPT-SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD-------SEIYQSLIDGLLQ 532
G + T +Y +L++ ++ FE ++LL P+ + + + +
Sbjct: 779 GLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEKACA 838
Query: 533 KGEPLLAYQT----------------LQKMLKSSIVPTTSTFHSILAGL 565
GEP++++++ ++ + VPTT +L L
Sbjct: 839 GGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPTTEVVSQVLGCL 887
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 7/231 (3%)
Query: 299 LNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
LNP + ++ L+ Q+I+ A V + + G+ + Y TLI + K+D +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
EV + G + T L++G AG + +A + + V+PD ++ L+
Sbjct: 523 EVFH-QMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLM 478
G +RA + E+ + + D + ++ + C G+ +A+ ++ +
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDH-----ISIGALMKACCNAGQVERAKEVYQMIH 636
Query: 479 KRGTQD-PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID 528
K G + P Y I + K G ++ + M ++ PD + +LID
Sbjct: 637 KYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 23/312 (7%)
Query: 129 LEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKS 188
+++ +N ARN + + T +N++I Y R GL E+ KLF MK
Sbjct: 153 MDMYASCGRINYARNVFDEMSHRDVVT-------WNTMIERYCRFGLVDEAFKLFEEMKD 205
Query: 189 VGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVD 248
V P + +++ + G ++++ E L V DT+ L+ + +D
Sbjct: 206 SNVMPDEMILCNIVSACGRTGNMRYNRAIY-EFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 249 DGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTT 308
FF+KMS N + +V G + G++ A + KK D+V +TT
Sbjct: 265 MAREFFRKMSVRN----LFVSTAMVSGYSKCGRLDDAQVIFDQTEKK------DLVCWTT 314
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
++ Y EAL VFEEM G+KP+ V+ ++I + +DK K V + V
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV-HSCIHVN 373
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G + N L+N + G L+ VFEKM V ++S ++ L G+ A
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV----VSWSSMINALSMHGEASDA 429
Query: 429 EKLYDELLKKGI 440
L+ + ++ +
Sbjct: 430 LSLFARMKQENV 441
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 114/276 (41%), Gaps = 42/276 (15%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLF--TSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
V+++ +L+ Y AG + + F S++++ VS ++V+ S K GR +
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS------KCGRLDD 296
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A+ +FD+ D + +I + ++ + R F++M PD+V+ +++
Sbjct: 297 AQVIFDQTEKK-----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 274 DGVCRAG---KVKTAH---------------NVVKGMVKKSEDLNP-----------DVV 304
G K K H N + M K L+ +VV
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGA 364
S+++++ M +AL +F M + ++PN VT+ ++ G +++ K++
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+ +P +++ A L EAL+V E M
Sbjct: 472 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 14/197 (7%)
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
D T NT++ +C G ++EA K+FE+M + V PD +V G+ +Y
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILI 492
+ L++ + + T LV Y G A FR++ R T+ ++
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGA-------GCMDMAREFFRKMSVRNLFVSTA---MV 285
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
G+ K G + ++ + D + ++I ++ P A + ++M S I
Sbjct: 286 SGYSKCGRLDDAQ----VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 553 PTTSTFHSILAGLLKKG 569
P + S+++ G
Sbjct: 342 PDVVSMFSVISACANLG 358
>AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24672008-24673471 REVERSE
Length = 487
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 154/348 (44%), Gaps = 15/348 (4%)
Query: 103 PSKALKFFNW-LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
P + L+FF+W +G + +D+ + +L +L ++ + A L S RK N ++ +
Sbjct: 83 PRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKD-HTAMQILLSDLRKENRA--MDKQ 139
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F+ + + + G ++++ +F + T +++ L RG A V
Sbjct: 140 TFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHH 199
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR--- 278
+ + L+ G+ V + R Q M S PD+ +N+L+ +C
Sbjct: 200 KDVIS-GNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNV 258
Query: 279 ----AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL 334
+G V A N++ M +S + P +SY LL + + E+ + E+M G
Sbjct: 259 NRNPSGLVPEALNIMLEM--RSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGC 316
Query: 335 KPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEAL 394
P+ +Y +++ L + K ++++ +E GF P+ L+ C +N AL
Sbjct: 317 DPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIE-RGFRPERKFYYDLIGVLCGVERVNFAL 375
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL 442
++FEKM V Y +L+ LC G+FE+ +L++E L + L
Sbjct: 376 QLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTL 423
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 148/402 (36%), Gaps = 107/402 (26%)
Query: 185 SMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKN 244
S KS+G S FN +L +L ++ + + A + L A D TF+I+ K
Sbjct: 93 SCKSLGSSLHDKEFNYVLRVLAEK-KDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKV 151
Query: 245 SMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVV 304
+D F+ + F+C D T ++ +C G VK A V+ + DV+
Sbjct: 152 GKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHH--------HKDVI 203
Query: 305 S------YTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
S Y +LL G+ +++N+ EA V ++M
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDM----------------------------- 234
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCN-------AGNLNEALKVFEKMMEWKVQPDSAT 411
+ G +PD N+L+ C +G + EAL + +M +K+QP S +
Sbjct: 235 -------KSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMS 287
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
Y++L+ L G+T +
Sbjct: 288 YNILLSCL---------------------------------------------GRTRRVR 302
Query: 472 RGFRQL--MKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
+ L MKR DP SY ++ G F G +++ M+ R F P+ + Y LI
Sbjct: 303 ESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLI 362
Query: 528 DGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
L A Q +KM +SS+ + ++ L K G
Sbjct: 363 GVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGG 404
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 189/436 (43%), Gaps = 69/436 (15%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N L+ + + E+ + F SM VV++N+++ + G+ + A+ +FDE
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFDE-- 275
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSS----------------------- 259
D +T+ ++ G+ +N MV++ F KM
Sbjct: 276 ---SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 332
Query: 260 --FNCDP--DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCM 315
F+ P ++ T+NT++ G + GK+ A N+ M K+ D VS+ ++ GY
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR------DPVSWAAMIAGYSQ 386
Query: 316 KQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTC 375
+ EAL +F +M +G + N ++++ + +V ++ K+ L G L GG+
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ-LHGRLVKGGYETGCF 445
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
N L+ +C G++ EA +F++M D +++ ++ G E A + ++ +
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEM----AGKDIVSWNTMIAGYSRHGFGEVALRFFESM 501
Query: 436 LKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQD----PTS--YK 489
++G L+ D +T M L T ++G RQ TQD P S Y
Sbjct: 502 KREG--LKPDDAT--------MVAVLSACSHTGLVDKG-RQYFYTMTQDYGVMPNSQHYA 550
Query: 490 ILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS 549
++ + G E + L+ M F+PD+ I+ +L+ G LA K+
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNM---PFEPDAAIWGTLLGASRVHGNTELAETAADKIF-- 605
Query: 550 SIVPTTSTFHSILAGL 565
++ P S + +L+ L
Sbjct: 606 AMEPENSGMYVLLSNL 621
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/558 (20%), Positives = 236/558 (42%), Gaps = 104/558 (18%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A K F+ +P+ S+ +M++ R RNL AR LF I + + +N+
Sbjct: 114 ARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKARE-LFEIMPERDVCS------WNT 162
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
++ Y + G ++ +F M + V++N+LL ++ + A +F +
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
V ++N L+ GF K + + +FF M+ D+V++NT++ G ++GK+ A
Sbjct: 219 LV-----SWNCLLGGFVKKKKIVEARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEA 269
Query: 286 HNVVKGMVKKSEDLNP--DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
+ D +P DV ++T ++ GY + ++EA +F++M ++ N V++N
Sbjct: 270 RQLF--------DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNA 317
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSP--DTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
++ G + ++++ KE+ + P + T NT++ G+ G ++EA +F+KM
Sbjct: 318 MLAGYVQGERMEMAKELFD-------VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM- 369
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL-RDDGSTPL-----VAAYK 455
+ D +++ ++ G A +L+ ++ ++G L R S+ L V A +
Sbjct: 370 ---PKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426
Query: 456 ----------------------SMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILII 493
++ CK G +A F+++ +D S+ +I
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM---AGKDIVSWNTMIA 483
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID-----GLLQKGEPLLAYQTLQKMLK 548
G+ + G E M R PD +++ GL+ KG Y Q
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF-YTMTQDY-- 540
Query: 549 SSIVPTTSTFHSIL-----AGLLKKG--------YAHESASLVVLLLEGKIRQNVTLSTH 595
++P + + ++ AGLL+ + ++A LL ++ N L+
Sbjct: 541 -GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAET 599
Query: 596 TVRLLFSNGLRDKGFRIV 613
+F+ + G ++
Sbjct: 600 AADKIFAMEPENSGMYVL 617
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 184/459 (40%), Gaps = 84/459 (18%)
Query: 263 DPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEA 322
D DI +N + R G+ A V K M + S VSY ++ GY + A
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSS------VSYNGMISGYLRNGEFELA 114
Query: 323 LVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMN 382
+F+EM ++ L V++N +IKG + + K +E+ E E D C+ NT+++
Sbjct: 115 RKLFDEMPERDL----VSWNVMIKGYVRNRNLGKARELFEIMPE-----RDVCSWNTMLS 165
Query: 383 GHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNL---------------------CH 421
G+ G +++A VF++M E +A S V+N C
Sbjct: 166 GYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCL 225
Query: 422 IGDFER------AEKLYDELLKKGIL--------------------LRDDGSTPLVAAYK 455
+G F + A + +D + + ++ L D+ V +
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
+M +N +A F ++ +R + S+ ++ G+ + E EL +M RN
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPER---NEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESA 575
+ ++I G Q G+ A KM K V ++ +++AG + G++ E+
Sbjct: 343 VS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPV----SWAAMIAGYSQSGHSFEAL 394
Query: 576 SLVVLLLEGKIRQNVT-----LSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELII 630
L V + R N + LST + G + G R+V Y+ G V L++
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG-RLVKGGYETGCFVG-NALLL 452
Query: 631 FLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCK 669
+ + EAN L ++ DI NT+I G +
Sbjct: 453 MYCKCGSIEEANDL----FKEMAGKDIVSWNTMIAGYSR 487
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 208/515 (40%), Gaps = 99/515 (19%)
Query: 132 LGRARNLNVARNF--LFSIKRKSNGTVKL-------EDRFFNSLIRSYGRAGLFQESVKL 182
LG A N+ V + ++S K K+ D F+N++IR Y G + ++L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 183 FTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFC 242
F MKS G + TF SLL M S F ++ +A + + N L+ +
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 243 KNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV--------------------------DGV 276
K ++D + F++M CD D VT+NT++ DG
Sbjct: 475 KCGALEDARQIFERM----CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 277 CRAGKVKTAHNV-------------VK--------------------GMVKKSEDL---- 299
C A +K +V VK G++K + +
Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 300 -NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
VVS L+ GY + N++EA+V+F+EM+ +G+ P+ +T+ T+++ C + +
Sbjct: 591 PEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEA-CHKPESLTLG 648
Query: 359 EVLEGALEVGGFSPDTCTLN-TLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT-YSVLV 416
G + GFS + L +L+ + N+ + EA +F ++ P S ++ ++
Sbjct: 649 TQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL----SSPKSIVLWTGMM 704
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
G +E A K Y E+ R DG P A + ++ + +C + + R
Sbjct: 705 SGHSQNGFYEEALKFYKEM-------RHDGVLPDQATFVTVLR-VCSVLSSLREGRAIHS 756
Query: 477 LMKRGTQD--PTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
L+ D + LI + K G + ++ M RR+ + + SLI+G + G
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGYAKNG 813
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
A + M +S I+P TF +L G
Sbjct: 814 YAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 155/369 (42%), Gaps = 27/369 (7%)
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
E R N+++ Y + + K F ++ V +NS+L + G+ F
Sbjct: 94 EGRLGNAIVDLYAKCAQVSYAEKQFDFLE-----KDVTAWNSMLSMYSSIGKPGKVLRSF 148
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
+ + P+ +TF+I++ + + V+ G + M + + LVD +
Sbjct: 149 VSLFENQ-IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAK 207
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
++ A V + +V +P+ V +T L GY +EA++VFE M D+G +P+
Sbjct: 208 CDRISDARRVFEWIV------DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDH 261
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
+ + T+I + K+ K +L G + SPD N +++GH G A++ F
Sbjct: 262 LAFVTVINTYIRLGKL-KDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFF 316
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
M + V+ +T ++ + + + + ++ E +K G+ + LV+ Y
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS--- 373
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
K K A + F L ++ + + +I G+ G EL + M ++
Sbjct: 374 ----KCEKMEAAAKVFEALEEK---NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 519 DSEIYQSLI 527
D + SL+
Sbjct: 427 DDFTFTSLL 435
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 128/290 (44%), Gaps = 13/290 (4%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N+LI Y + L +E+V LF M + GV+PS +TF +++ K + F ++
Sbjct: 599 NALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQIT 656
Query: 224 TYGVAPDTYTFNILIRGFCKNSM-VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G + + I + G NS + + F ++SS IV + ++ G + G
Sbjct: 657 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS---PKSIVLWTGMMSGHSQNGFY 713
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ A K M + + + PD ++ T+LR + ++ E + + + +T N
Sbjct: 714 EEALKFYKEM--RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
TLI + + +V + + + N+L+NG+ G +ALK+F+ M +
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRR----RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKK-GILLRDDGSTPLV 451
+ PD T+ ++ H G K+++ ++ + GI R D +V
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 203/450 (45%), Gaps = 41/450 (9%)
Query: 141 ARNFLFSIKRKS-----NGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSV 195
A +FL +K+ +G + L + +NSL++ Y G F + K+F M P V
Sbjct: 142 ASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP----HPDV 197
Query: 196 VTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIR--GFCKNSMVDDGFRF 253
+FN +++ K+G + A ++ +M+S G+ PD YT L+ G + + G
Sbjct: 198 SSFNVMIVGYAKQGFSLEALKLYFKMVSD-GIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
+ + +++ N L+D + + A M KK D+ S+ T++ G+
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKK------DMRSWNTMVVGF 310
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK--IKEVLEGALEVGGFS 371
+++ A VF++M + L V++N+L+ G + + D+ ++E+ V
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDL----VSWNSLLFGYSK-KGCDQRTVRELFYEMTIVEKVK 365
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKL 431
PD T+ +L++G N G L+ V ++ +++ D+ S L+ C G ERA +
Sbjct: 366 PDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMV 425
Query: 432 YDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKIL 491
+ +K VA + SM L +G +A + F ++ + G +
Sbjct: 426 FKTATEKD-----------VALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLA 474
Query: 492 IIGHCKE-GTFEAGYELLVLMLRR-NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS 549
++ C G E G + M + FDP++E Y SL+D L + G A +QK K
Sbjct: 475 VLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQK--KM 532
Query: 550 SIVPTTSTFHSILAGLLKKGYAHESASLVV 579
+ P+ S + SIL+ + G E+A L +
Sbjct: 533 PMRPSQSMWGSILSA-CRGGEDIETAELAL 561
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 15/291 (5%)
Query: 149 KRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKR 208
KR + K + R +N+++ + R G + + +F M +V++NSLL K+
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK----RDLVSWNSLLFGYSKK 344
Query: 209 G-RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIV 267
G + +F EM V PD T LI G N + G + D
Sbjct: 345 GCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF 404
Query: 268 TYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFE 327
+ L+D C+ G ++ A V K +K DV +T+++ G N +AL +F
Sbjct: 405 LSSALIDMYCKCGIIERAFMVFKTATEK------DVALWTSMITGLAFHGNGQQALQLFG 458
Query: 328 EMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
M ++G+ PN VT ++ +++ V + GF P+T +L++ C A
Sbjct: 459 RMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRA 518
Query: 388 GNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG-DFERAEKLYDELLK 437
G + EA + +K M ++P + + ++ + C G D E AE ELLK
Sbjct: 519 GRVEEAKDIVQKKM--PMRPSQSMWGSIL-SACRGGEDIETAELALTELLK 566
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 145/344 (42%), Gaps = 46/344 (13%)
Query: 300 NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKG---LCEVQKIDK 356
NP+V Y T++ +N E ++ M+ + P+ T+ L+K L EV++I
Sbjct: 97 NPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQI-H 153
Query: 357 IKEVLEGALEVGGF--------------------------SPDTCTLNTLMNGHCNAGNL 390
++ G L +G + PD + N ++ G+ G
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFS 213
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
EALK++ KM+ ++PD T L+ H+ D + ++ + ++G + + L
Sbjct: 214 LEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN--LIL 271
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVL 510
A M+ F CK ++ A+R F + K+ D S+ +++G + G EA +
Sbjct: 272 SNALLDMY-FKCK--ESGLAKRAFDAMKKK---DMRSWNTMVVGFVRLGDMEAAQAVFDQ 325
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL--QKMLKSSIVPTTSTFHSILAGLLKK 568
M +R D + SL+ G +KG + L + + + P T S+++G
Sbjct: 326 MPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 569 GYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
G + L++ +++ + LS+ + + G+ ++ F +
Sbjct: 382 GELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMV 425
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 162/367 (44%), Gaps = 48/367 (13%)
Query: 110 FNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNF---LFSIKRKSNGTVKLEDRFFNSL 166
F W + G + +S LM+ +LG + N+A +F++ + + + L +
Sbjct: 144 FKWGEKRG-CDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFL-------M 195
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
+ Y A ++++ F M +P F LL L + G A+ ML++
Sbjct: 196 MDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF---MLASKK 252
Query: 227 VAP-DTYTFNILIRGFCK-NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
+ P D FN+++ G+C + V + R +++M ++ P+ +Y+ ++ + G +
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
+ + M K+ L P + Y +L+ + DEA+ + +++ ++GLKP++VTYN++
Sbjct: 313 SLRLYDEMKKRG--LAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 345 IKGLCEVQKIDKIKEVLE------------------------------GALEVGGFSPDT 374
I+ LCE K+D + VL G +++ P
Sbjct: 371 IRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTE 430
Query: 375 CTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
T ++ ALK++ +M +++ + A Y ++ L G E+A ++Y E
Sbjct: 431 ETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSE 490
Query: 435 LLKKGIL 441
+ KG +
Sbjct: 491 MKSKGFV 497
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 139/317 (43%), Gaps = 17/317 (5%)
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
++ Y + +A+ F+ M P + L+ LC I+K +E + + ++
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKL- 253
Query: 369 GFSPDTCTLNTLMNGHCNAG-NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
F D N ++NG CN ++ EA +++ +M + + P+ +YS ++ +G+
Sbjct: 254 -FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 428 AEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPT 486
+ +LYDE+ K+G+ P + Y S+ L + +A + ++L + G + D
Sbjct: 313 SLRLYDEMKKRGL-------APGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSV 365
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGL-LQKGEPLLAYQTLQK 545
+Y +I C+ G + +L M+ N P + + + ++ + +K + L +
Sbjct: 366 TYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEK-----TLEVLGQ 420
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGL 605
M S + PT TF IL L K + + + +I N L T++ L S G
Sbjct: 421 MKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGW 480
Query: 606 RDKGFRIVGLLYDNGYM 622
+K I + G++
Sbjct: 481 LEKAREIYSEMKSKGFV 497
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 210/481 (43%), Gaps = 78/481 (16%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N I R G E+ KLF S S +S ++NS++ A+ +FDEM
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSIS----SWNSMVAGYFANLMPRDARKLFDEM-- 74
Query: 224 TYGVAPD--TYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
PD ++N L+ G+ KN +D+ + F M N +V++ LV G GK
Sbjct: 75 -----PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERN----VVSWTALVKGYVHNGK 125
Query: 282 VKTAHNVVKGMVKKSE-----------------------DLNPDV--VSYTTLLRGYCMK 316
V A ++ M +K++ ++ PD ++ T+++ G C +
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKE 185
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID---KIKEVLEGALEVGGFSPD 373
+DEA +F+EM ++ + +T+ T++ G + ++D KI +V+ EV
Sbjct: 186 GRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV------ 235
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
+ +++ G+ G + +A ++FE M V+P A + ++ L G+ +A +++D
Sbjct: 236 --SWTSMLMGYVQNGRIEDAEELFEVM---PVKPVIAC-NAMISGLGQKGEIAKARRVFD 289
Query: 434 ELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILII 493
+ + R+D A+++++ + +NG +A F + K+G + I I+
Sbjct: 290 SMKE-----RND------ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL 338
Query: 494 GHCKE-GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
C + G ++ ++R FD D + L+ ++ GE + + + I+
Sbjct: 339 SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 553 PTTSTFHSILAGLLKKGYAHESASLVV-LLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFR 611
++SI++G G E+ + + L G + N T+ G+ ++G +
Sbjct: 399 ----MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 612 I 612
I
Sbjct: 455 I 455
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 116/291 (39%), Gaps = 55/291 (18%)
Query: 128 MLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMK 187
M+ LG+ + AR S+K +++ + + ++I+ + R G E++ LF M+
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDAS-------WQTVIKIHERNGFELEALDLFILMQ 323
Query: 188 SVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML-STYGVAPDTYTFNILIRGFCKNSM 246
GV P+ T S+L + + K V +++ + V D Y ++L+ + K
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGE 381
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
+ F + S D++ +
Sbjct: 382 LVKSKLIFDRFPS-----------------------------------------KDIIMW 400
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKG-LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGAL 365
+++ GY +EAL VF EM G KPN VT+ + +++ ++ E
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
V G P T +++ AG NEA+++ + M V+PD+A + L+
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLL 508
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 196/434 (45%), Gaps = 99/434 (22%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N++I Y ++G ++++LF M ++V++NS++ L++RGR + A ++F+ M
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPE----RNIVSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
D ++ ++ G KN VD+ R F M N I+++N ++ G + ++
Sbjct: 199 RR-----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERN----IISWNAMITGYAQNNRI 249
Query: 283 KTA---------------HNVVKGMVKKSE--------DLNPD--VVSYTTLLRGYCMKQ 317
A + ++ G ++ E D P+ V+S+TT++ GY +
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 318 NIDEALVVFEEMV-DKGLKPNAVTYNTLIK------GLCEVQKIDKI--------KEVLE 362
+EAL VF +M+ D +KPN TY +++ GL E Q+I ++ E++
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT 369
Query: 363 GALEVGGFSP-------------------DTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
AL + +S D + N+++ + + G+ EA++++ +M +
Sbjct: 370 SAL-LNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKH 428
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLK-KGILLRDDGSTPLV------AAYKS 456
+P + TY L+ H G E+ + + +L++ + + LR++ T LV K
Sbjct: 429 GFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKD 488
Query: 457 MFQFL-CKNGKTSKAERG------------------FRQLMKRGTQDPTSYKILIIGHCK 497
+ F+ C + + S++ G +++++ G+ D +Y ++ +
Sbjct: 489 VTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAA 548
Query: 498 EGTFEAGYELLVLM 511
G E E+ + M
Sbjct: 549 NGKREEAAEMRMKM 562
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 216/491 (43%), Gaps = 102/491 (20%)
Query: 158 LEDRFFNSLIRSYGRAGLF-----QESVKLFTSMKSVGVS---PSVVTFNSLLLILLKRG 209
++ R + L Y R+ +F SV+LF ++S+ S P V L+ L K G
Sbjct: 1 MQSRALSRLRSYYKRSSVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVG 60
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
+ A+ +FD + D T+ +I G+ K + + F ++ S ++VT+
Sbjct: 61 KIAEARKLFDGLPER-----DVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTW 112
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
+V G R+ ++ A + + M ++ +VVS+ T++ GY ID+AL +F+EM
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPER------NVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
++ N V++N+++K L VQ+ G
Sbjct: 167 PER----NIVSWNSMVKAL--VQR----------------------------------GR 186
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
++EA+ +FE+M + D +++ +V L G + A +L+D + ++ I+
Sbjct: 187 IDEAMNLFERM----PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII-------- 234
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLV 509
++ +M +N + +A++ F+ + +R D S+ +I G + L
Sbjct: 235 ---SWNAMITGYAQNNRIDEADQLFQVMPER---DFASWNTMITGFIRNREMNKACGLFD 288
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKS-SIVPTTSTFHSILAGLLKK 568
M +N + ++I G ++ E A KML+ S+ P T+ SIL+
Sbjct: 289 RMPEKNVIS----WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS----- 339
Query: 569 GYAHESASLVVLLLEG-KIRQNVTLSTHTVRLLFSNGLRD---KGFRIVGL--LYDNGYM 622
+ S + L+EG +I Q ++ S H + ++ L + K ++ ++DNG +
Sbjct: 340 -----ACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNG-L 393
Query: 623 VDMKELIIFLS 633
V ++LI + S
Sbjct: 394 VCQRDLISWNS 404
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 123/272 (45%), Gaps = 30/272 (11%)
Query: 415 LVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGF 474
L+ LC +G A KL+D L ++ ++ T ++ Y K G +A F
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVT----WTHVITGY-------IKLGDMREARELF 100
Query: 475 RQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
++ R ++ ++ ++ G+ + L M RN + ++IDG Q G
Sbjct: 101 DRVDSR--KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDGYAQSG 154
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
A + +M + +IV +++S++ L+++G E+ +L E R++V T
Sbjct: 155 RIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNL----FERMPRRDVVSWT 206
Query: 595 HTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELIIFLSQSRKLLEANKLLLFCLEKHHN 654
V L NG D+ R+ + + ++ +I +Q+ ++ EA++L E+
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERN-IISWNAMITGYAQNNRIDEADQLFQVMPER--- 262
Query: 655 IDIDMCNTVIEGLCKMKKLSEAFGLYYELVEK 686
D NT+I G + +++++A GL+ + EK
Sbjct: 263 -DFASWNTMITGFIRNREMNKACGLFDRMPEK 293
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 175/385 (45%), Gaps = 34/385 (8%)
Query: 192 SPSVVTFNSLLLILLKR-GRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDG 250
+ + +T+NSLL+ + K R A +FDE+ PDT+++NI++ + +N +
Sbjct: 3 AKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE-----PDTFSYNIMLSCYVRNVNFEKA 57
Query: 251 FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLL 310
FF +M D ++NT++ G R G+++ A + M++K+E VS+ ++
Sbjct: 58 QSFFDRMPF----KDAASWNTMITGYARRGEMEKARELFYSMMEKNE------VSWNAMI 107
Query: 311 RGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGF 370
GY ++++A F+ +G+ V + +I G + +K+ E+ E +
Sbjct: 108 SGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKV----ELAEAMFKDMTV 159
Query: 371 SPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEK 430
+ + T N +++G+ + LK+F M+E ++P+S+ S + + + +
Sbjct: 160 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ 219
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKI 490
++ +++ K L D V A S+ CK G+ A + F ++MK+ +D ++
Sbjct: 220 IH-QIVSKSTLCND------VTALTSLISMYCKCGELGDAWKLF-EVMKK--KDVVAWNA 269
Query: 491 LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSS 550
+I G+ + G + L M+ PD + +++ G + + M++
Sbjct: 270 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDY 329
Query: 551 IVPTTSTFHSILAGLLKKGYAHESA 575
V ++ + LL + E A
Sbjct: 330 KVEPQPDHYTCMVDLLGRAGKLEEA 354
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 153/371 (41%), Gaps = 69/371 (18%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA FF+ +P + S+ M+ R + AR +S+ K+ + +N
Sbjct: 56 KAQSFFDRMP----FKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVS-------WN 104
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSP--SVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++I Y G +++ F V+P VV + +++ +K + +A+++F +M
Sbjct: 105 AMISGYIECGDLEKASHFFK------VAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 158
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP------------------ 264
V + T+N +I G+ +NS +DG + F+ M P
Sbjct: 159 ----VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 214
Query: 265 -----------------DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
D+ +L+ C+ G++ A + + M KK DVV++
Sbjct: 215 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK------DVVAWN 268
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
++ GY N D+AL +F EM+D ++P+ +T+ ++ ++ E +
Sbjct: 269 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 328
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG-DFE 426
P +++ AG L EALK+ M +P +A + L+ C + + E
Sbjct: 329 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGTLL-GACRVHKNVE 384
Query: 427 RAEKLYDELLK 437
AE ++LL+
Sbjct: 385 LAEFAAEKLLQ 395
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 172/356 (48%), Gaps = 20/356 (5%)
Query: 149 KRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKR 208
K+ + TV+ + +N+L+ +Y +GL E+++LF M+ GV P+V+T+N ++L LL+
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 209 GRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVT 268
G+ + AK +F +M S+ G+ P+ ++ ++ G +N ++ F +KM P+ +
Sbjct: 490 GQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
+ + + G + ++ + V T+L+ Y +I++A VF
Sbjct: 549 ITVALSACAHLASLHIGRT-IHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 329 MVDKGLK-PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNA 387
+ L NA+ + G +++ + LEG G PD T+ +++ +A
Sbjct: 608 KLYSELPLSNAMISAYALYG--NLKEAIALYRSLEGV----GLKPDNITITNVLSACNHA 661
Query: 388 GNLNEALKVFEKMMEWK-VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDG 446
G++N+A+++F ++ + ++P Y ++V L G+ E+A +L +E+ K
Sbjct: 662 GDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK-------- 713
Query: 447 STPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFE 502
P +S+ K KT + R+L++ ++ +Y + + EG+++
Sbjct: 714 --PDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWD 767
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 159/335 (47%), Gaps = 30/335 (8%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL-----LILLKRGRTNMAKSV 217
+N+L+ Y + G +E+++LF+ M+ GV P+ VT ++ L + ++ G+ + A ++
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI 301
Query: 218 FDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVC 277
+ G+ D L+ +CK +++ F +M + D+VT+N ++ G
Sbjct: 302 VN------GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF----EKDVVTWNLIISGYV 351
Query: 278 RAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPN 337
+ G V+ A + + M + E L D V+ TL+ +N+ V + + +
Sbjct: 352 QQGLVEDAIYMCQLM--RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
V +T++ + I K+V + +E D NTL+ + +G EAL++F
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVE-----KDLILWNTLLAAYAESGLSGEALRLF 464
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
M V P+ T+++++ +L G + A+ ++ ++ GI+ P + ++ +M
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII-------PNLISWTTM 517
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILI 492
+ +NG + +A R++ + G + P ++ I +
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLR-PNAFSITV 551
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 172/427 (40%), Gaps = 49/427 (11%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
+V ++ +++ + + G A F EML + PD N ++ CK RF
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENE-IFPD----NFVVPNVCKACGALKWSRF 191
Query: 254 FQKMSSF----NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPD--VVSYT 307
+ + + + + ++L D + G + A V D PD V++
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF--------DEIPDRNAVAWN 243
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
L+ GY +EA+ +F +M +G++P VT +T + + +++ K+ A+ V
Sbjct: 244 ALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI-V 302
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME-----WKVQPDSATYSVLVRNLCHI 422
G D +L+N +C G + A VF++M E W + LV + ++
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 423 GDFERAEKL-YD--------------ELLKKG-----ILLRDDGSTPLVAAYKSMFQFLC 462
R EKL YD E LK G +R + +V A ++
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLA-STVMDMYA 421
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEI 522
K G A++ F +++ D + L+ + + G L M P+
Sbjct: 422 KCGSIVDAKKVFDSTVEK---DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 523 YQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLL 582
+ +I LL+ G+ A +M S I+P ++ +++ G+++ G + E+ + +
Sbjct: 479 WNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Query: 583 EGKIRQN 589
E +R N
Sbjct: 539 ESGLRPN 545
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N++I +Y G +E++ L+ S++ VG+ P +T ++L G N A +F +++S
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ P + +++ + R ++M PD +LV + K +
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPF---KPDARMIQSLVASCNKQRKTE 733
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
+ + +++ SE N +Y T+ Y ++ + DE + + E M KGLK
Sbjct: 734 LVDYLSRKLLE-SEPENSG--NYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 171/393 (43%), Gaps = 36/393 (9%)
Query: 192 SPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGF 251
SP+ T NS++ +A +VF EML V PD Y+F +++ ++G
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLG-PVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 252 RFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR 311
+ D+ NTLV+ R+G + A V+ M + D VS+ +LL
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR------DAVSWNSLLS 214
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFS 371
Y K +DEA +F+EM ++ N ++N +I G + + KEV + ++ V
Sbjct: 215 AYLEKGLVDEARALFDEMEER----NVESWNFMISGYAAAGLVKEAKEVFD-SMPV---- 265
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ-PDSATYSVLVRNLCHIGDFERAEK 430
D + N ++ + + G NE L+VF KM++ + PD T ++ +G + E
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEW 325
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKI 490
++ + K GI + +T LV Y K GK KA FR KR D +++
Sbjct: 326 VHVYIDKHGIEIEGFLATALVDMYS-------KCGKIDKALEVFRATSKR---DVSTWNS 375
Query: 491 LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID-----GLLQKGEPLLAYQTLQK 545
+I G + E+ M+ F P+ + ++ G+L + L ++ +
Sbjct: 376 IISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKL--FEMMSS 433
Query: 546 MLKSSIVPTTSTFHSILAGLLKKGYAHESASLV 578
+ + + PT + ++ L + G E+ LV
Sbjct: 434 VYR--VEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 155/370 (41%), Gaps = 55/370 (14%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N+L+ YGR+G F+ + K+ M V++NSLL L++G + A+++FDEM
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMP----VRDAVSWNSLLSAYLEKGLVDEARALFDEMEE 234
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ ++N +I G+ +V + F M D+V++N +V G
Sbjct: 235 R-----NVESWNFMISGYAAAGLVKEAKEVFDSMPV----RDVVSWNAMVTAYAHVGCYN 285
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
V M+ S + PD + ++L ++ + V + G++
Sbjct: 286 EVLEVFNKMLDDSTE-KPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATA 344
Query: 344 LIKGLCEVQKIDKIKEVLEG------------------------ALEV------GGFSPD 373
L+ + KIDK EV ALE+ GF P+
Sbjct: 345 LVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPN 404
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMME-WKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
T +++ + G L++A K+FE M ++V+P Y +V L +G E AE+L
Sbjct: 405 GITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILI 492
+E+ D+ S L +S+ + G+ +AER +L++ +D + Y +
Sbjct: 465 NEIPA------DEASILL----ESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMS 514
Query: 493 IGHCKEGTFE 502
+ +G +E
Sbjct: 515 NLYASDGRWE 524
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 175/384 (45%), Gaps = 30/384 (7%)
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
P+T N LI + K D + F +M N + ++N +V G ++G + A V
Sbjct: 80 PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRN----LYSWNNMVSGYVKSGMLVRARVV 135
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
M ++ DVVS+ T++ GY N+ EAL ++E G+K N ++ L+
Sbjct: 136 FDSMPER------DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
Query: 349 CEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
+ +++ ++ G + V GF + ++++ + G + A + F++M D
Sbjct: 190 VKSRQL-QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM----TVKD 244
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTS 468
++ L+ +GD E AEKL+ E+ +K + T L+A Y + G +
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPV----SWTALIAGY-------VRQGSGN 293
Query: 469 KAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
+A FR+++ G + + ++ + + G E+ M+R N P++ + SLI
Sbjct: 294 RALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLI 353
Query: 528 DGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIR 587
D + K L A + + ++ ++++++ L + G H++ ++ +++ +++
Sbjct: 354 D-MYSKSGSLEASERVFRICDDK--HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 588 QNVTLSTHTVRLLFSNGLRDKGFR 611
N T + +GL ++G R
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLR 434
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 179/405 (44%), Gaps = 29/405 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+++ Y + G E++ + + G+ + +F LL +K + + + ++L
Sbjct: 147 WNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVL 206
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G + +I + K ++ R F +M+ DI + TL+ G + G +
Sbjct: 207 -VAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV----KDIHIWTTLISGYAKLGDM 261
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ A + M +K NP VS+T L+ GY + + + AL +F +M+ G+KP T++
Sbjct: 262 EAAEKLFCEMPEK----NP--VSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
+ + + + KE+ G + P+ +++L++ + +G+L + +VF +
Sbjct: 316 SCLCASASIASLRHGKEI-HGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ D ++ ++ L G +A ++ D+++K + T LV +
Sbjct: 375 ---KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV---QPNRTTLVV----ILNACS 424
Query: 463 KNGKTSKAERGFRQL-MKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
+G + R F + ++ G D Y LI + G F+ EL+ + F+PD
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK---ELMRKIEEMPFEPDK 481
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
I+ +++ G L + +++K + P +S + +L+ +
Sbjct: 482 HIWNAILGVCRIHGNEELGKKAADELIK--LDPESSAPYILLSSI 524
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 163/372 (43%), Gaps = 27/372 (7%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK-RGRTNMAKSVFDE 220
+NSLIR Y +GL E++ LF M + G+SP TF L K R + N +
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ--IHG 158
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
++ G A D + N L+ + + +D + F +MS N +V++ +++ G R
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN----VVSWTSMICGYARRD 214
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
K A ++ MV + E++ P+ V+ ++ ++++ V+ + + G++ N +
Sbjct: 215 FAKDAVDLFFRMV-RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+ L+ + ID K + + E G + D C N + + + G EAL VF M
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFD---EYGASNLDLC--NAMASNYVRQGLTREALGVFNLM 328
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
M+ V+PD + + + + + + + +L+ G D+ L+ Y
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM----- 383
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
K + + FR + + ++ ++ G+ + G +A +E M +N
Sbjct: 384 -----KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS-- 436
Query: 521 EIYQSLIDGLLQ 532
+ ++I GL+Q
Sbjct: 437 --WNTIISGLVQ 446
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 17/279 (6%)
Query: 150 RKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRG 209
R SN TV +NS++ Y G + + F +M ++V++N+++ L++
Sbjct: 397 RMSNKTVVT----WNSIVAGYVENGEVDAAWETFETMPE----KNIVSWNTIISGLVQGS 448
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
A VF M S GV D T + +D + + D+
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
TLVD R G ++A ++ + N DV ++T + M N + A+ +F++M
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLT------NRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
+++GLKP+ V + + + + KE+ L++ G SP+ +++ AG
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
L EA+++ E M ++P+ ++ L+ G+ E A
Sbjct: 623 LEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMA 658
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 158/394 (40%), Gaps = 55/394 (13%)
Query: 108 KFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLI 167
K + ++ G ND ++++ + ++VA+ G L+ N++
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF-----DEYGASNLD--LCNAMA 309
Query: 168 RSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGV 227
+Y R GL +E++ +F M GV P ++ S + + KS +L G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GF 368
Query: 228 APDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHN 287
N LI + K D FR F +MS + +VT+N++V G G+V A
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMS----NKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 288 VVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM-VDKGLKPNAVTYNTLIK 346
+ M +K ++VS+ T++ G +EA+ VF M +G+ + VT ++
Sbjct: 425 TFETMPEK------NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 347 GLCEVQKIDKIK-------------EVLEGALEVGGFS----PDTC--TLNTLMNGHCNA 387
+ +D K +V G V FS P++ N+L N +A
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 388 G-----------NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELL 436
N A+++F+ M+E ++PD + + H G ++ ++++ +L
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 437 KKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKA 470
K G +P Y M L + G +A
Sbjct: 599 KL------HGVSPEDVHYGCMVDLLGRAGLLEEA 626
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 174/411 (42%), Gaps = 30/411 (7%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+N++ R + + ++KL+ M S+G+ P+ TF +L K + + +
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
L G D Y LI + +N ++D + F K + D+V+Y L+ G G
Sbjct: 161 LKL-GCDLDLYVHTSLISMYVQNGRLEDAHKVFDK----SPHRDVVSYTALIKGYASRGY 215
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
++ A + + K DVVS+ ++ GY N EAL +F++M+ ++P+ T
Sbjct: 216 IENAQKLFDEIPVK------DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
T++ + I+ ++V ++ GF + +N L++ + G L A +FE++
Sbjct: 270 VTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL- 327
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
D +++ L+ H+ ++ A L+ E+L+ G TP S+
Sbjct: 328 ---PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-------GETPNDVTMLSILPAC 377
Query: 462 CKNGKTSKAERGFRQLMKR--GTQDPTSYKI-LIIGHCKEGTFEAGYELLVLMLRRNFDP 518
G + KR G + +S + LI + K G EA +++ +L ++
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437
Query: 519 DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
+ ++I G G ++ +M K I P TF +L+ G
Sbjct: 438 ----WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 168/442 (38%), Gaps = 93/442 (21%)
Query: 92 TGFQVLRLIKVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRK 151
T F+ L P ALK + + +G N ++ +L+ + A++ F ++
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK--------SCAKSKAFKEGQQ 155
Query: 152 SNGTV-----KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSP--SVVTFNSLLLI 204
+G V L+ SLI Y + G +++ K+F SP VV++ +L+
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK------SPHRDVVSYTALIKG 209
Query: 205 LLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
RG A+ +FDE+ D ++N +I G+ + + F+ M N P
Sbjct: 210 YASRGYIENAQKLFDEI-----PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 265 DIVTYNTLVDGVCRAGKVKTAH------------------NVVKGMVKKSEDLNP----- 301
D T T+V ++G ++ N + + K +L
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 302 ------DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
DV+S+ TL+ GY EAL++F+EM+ G PN VT +++ + ID
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 356 -----------KIKEV-------------------LEGALEVGG--FSPDTCTLNTLMNG 383
++K V +E A +V + N ++ G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 384 HCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR 443
G + + +F +M + +QPD T+ L+ H G + ++ + +
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ------ 498
Query: 444 DDGSTPLVAAYKSMFQFLCKNG 465
D TP + Y M L +G
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSG 520
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 127/306 (41%), Gaps = 21/306 (6%)
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
P+ +N + RG +S + + M S P+ T+ ++ ++ K +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGL 348
++K DL D+ +T+L+ Y +++A VF DK + V+Y LIKG
Sbjct: 157 HGHVLKLGCDL--DLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGY 210
Query: 349 CEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
I+ +++ + E+ D + N +++G+ GN EAL++F+ MM+ V+PD
Sbjct: 211 ASRGYIENAQKLFD---EIP--VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTS 468
+T +V G E +++ + + D G + ++ K G+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVH-------LWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 469 KAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID 528
A F +L + D S+ LI G+ ++ L MLR P+ S++
Sbjct: 319 TACGLFERLPYK---DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 529 GLLQKG 534
G
Sbjct: 376 ACAHLG 381
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 132/331 (39%), Gaps = 31/331 (9%)
Query: 128 MLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMK 187
++++ + ++ A SI KS + +N++I + G S LF+ M+
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSS-------WNAMIFGFAMHGRADASFDLFSRMR 462
Query: 188 SVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV 247
+G+ P +TF LL G ++ + +F M Y + P + +I + +
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
+ M PD V + +L+ G V+ + + ++K E NP SY
Sbjct: 523 KEAEEMINMMEME---PDGVIWCSLLKACKMHGNVELGESFAENLIK-IEPENPG--SYV 576
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKP---------NAVTYNTLI--KGLCEVQKIDK 356
L Y +E + DKG+K ++V + +I K ++I
Sbjct: 577 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 636
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL---NEALKVFEKMMEWKVQPDSATYS 413
+ E +E LE GF PDT + M G L +E L + ++ K T
Sbjct: 637 MLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTK----PGTKL 692
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
+V+NL + A KL ++ K+ I+ RD
Sbjct: 693 TIVKNLRVCRNCHEATKLISKIYKREIIARD 723
>AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:172256-174137 FORWARD
Length = 577
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 190/467 (40%), Gaps = 69/467 (14%)
Query: 95 QVLRLIKVPSKALKFFNWLPQM-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN 153
+VL+ KA FFNW Q+ GF H+ +Y ML+I G A + + +K K
Sbjct: 94 RVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKG- 152
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
V ++ + SLI +G +++L+ M+ G P+VV++ + + +L GR
Sbjct: 153 --VLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEE 210
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A V+ EML + V+P+ +T+ +L+ ++ F KM PD N L+
Sbjct: 211 ATEVYKEMLRS-RVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Query: 274 DGVCRAGKVKTAHNVVKGM---------------------VKKSEDLNPDVVSYTTLLRG 312
+ G+ V+ M +S+DL +V S+ + +
Sbjct: 270 AKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHIS-VES 328
Query: 313 YC-----------------------------MKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
C MKQN+ ++ +M D+ +K ++ +
Sbjct: 329 LCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSA 388
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
+I+ C+ + + + +LE+G + L L+ + L + ++V ++M+
Sbjct: 389 IIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYL-ALIGNFLRSNELPKVIEVVKEMV-- 445
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
K Q Y + L H F R +L ++ LL DD VAAY ++
Sbjct: 446 KAQHSLGCYQGAM--LIHRLGFGRRPRLAADVFD---LLPDDQKG--VAAYTALMDVYIS 498
Query: 464 NGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELL 508
G KA + R++ +R P+ +Y +L+ G K F+ LL
Sbjct: 499 AGSPEKAMKILREMREREIM-PSLGTYDVLLSGLEKTSDFQKEVALL 544
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 5/224 (2%)
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
E L GV D++ N +++ F + ++ F D TY T++D A
Sbjct: 78 EQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDH--FTYTTMLDIFGEA 135
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
G++++ ++V M K + + D V+YT+L+ ++D A+ ++EEM D G +P V
Sbjct: 136 GRIQSMYSVFHLM--KEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVV 193
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
+Y +K L ++++ EV + L SP+ T LM G EAL +F K
Sbjct: 194 SYTAYMKMLFADGRVEEATEVYKEMLR-SRVSPNCHTYTVLMEYLVATGKCEEALDIFFK 252
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR 443
M E VQPD A ++L+ G+ ++ + + G++LR
Sbjct: 253 MQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLR 296
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 11/244 (4%)
Query: 327 EEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCN 386
E++ G++ ++ N ++K +QK A ++ GF D T T+++
Sbjct: 78 EQLPHLGVRWDSHIINRVLKAHPPMQKA---WLFFNWAAQIKGFKHDHFTYTTMLDIFGE 134
Query: 387 AGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDG 446
AG + VF M E V D+ TY+ L+ + GD + A +L++E +RD+G
Sbjct: 135 AGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEE-------MRDNG 187
Query: 447 STPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK-RGTQDPTSYKILIIGHCKEGTFEAGY 505
P V +Y + + L +G+ +A ++++++ R + + +Y +L+ G E
Sbjct: 188 CEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEAL 247
Query: 506 ELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
++ M PD LI L+ GE + L M ++ +V F L L
Sbjct: 248 DIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETL 307
Query: 566 LKKG 569
G
Sbjct: 308 KAAG 311
>AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22704630-22706126 REVERSE
Length = 498
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 7/260 (2%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN L+R++ +E+ +F + S +P V T N LLL + G + + EM+
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHS-RFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G P++ T+ I I GFCK + R F+ M + D + TL+ G A
Sbjct: 238 KR-GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A + + K+ L PD +Y L+ ++ A+ V +EM +KG++P++VT++
Sbjct: 297 IKARQLFDEISKRG--LTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFH 354
Query: 343 TLIKGLCEVQKI--DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
++ G+ + ++ + + E + E P T T+ LM C+ G +N L +++ M
Sbjct: 355 SMFIGMMKSKEFGFNGVCEYYQKMKE-RSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 401 MEWKVQPDSATYSVLVRNLC 420
+E P +L LC
Sbjct: 414 LEKGYCPHGHALELLTTALC 433
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 145/346 (41%), Gaps = 26/346 (7%)
Query: 198 FNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM 257
F L IL + + A ++ E+ Y + +IL+ K ++ F KM
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM 165
Query: 258 SS--FNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCM 315
F + +N L+ C ++K A ++ + + + NPDV + LL G+
Sbjct: 166 EKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR---FNPDVKTMNILLLGFKE 222
Query: 316 KQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTC 375
++ + + EMV +G KPN+VTY I G C+ + + + E ++ F
Sbjct: 223 AGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFED-MDRLDFDITVQ 281
Query: 376 TLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
L TL++G A N +A ++F+++ + + PD Y+ L+ +L GD A K+ E+
Sbjct: 282 ILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEM 341
Query: 436 LKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR------QLMKRGTQDPTSYK 489
+KGI P + SMF G E GF Q MK + P +
Sbjct: 342 EEKGI-------EPDSVTFHSMFI-----GMMKSKEFGFNGVCEYYQKMKERSLVPKTPT 389
Query: 490 ILIIGH--CKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQK 533
I+++ C G G +L ML + + P + L L +
Sbjct: 390 IVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCAR 435
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 143/378 (37%), Gaps = 85/378 (22%)
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV------GGFSPDTCTLNTLMNGHCNAGN 389
PN +++ ++ LC++ K +E LE +++ F D N L+ C
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE--FNILLRAFCTERE 191
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
+ EA +FEK+ + PD T ++L+ GD E Y E++K
Sbjct: 192 MKEARSIFEKLHS-RFNPDVKTMNILLLGFKEAGDVTATELFYHEMVK------------ 238
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLV 509
RGF+ + +Y I I G CK+ F L
Sbjct: 239 ----------------------RGFKP-------NSVTYGIRIDGFCKKRNFGEALRLFE 269
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
M R +FD +I +LI G + A Q ++ K + P ++++++ L+K G
Sbjct: 270 DMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCG 329
Query: 570 YAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKELI 629
S + +++ + + + T +F ++ K F G+ Y MKE
Sbjct: 330 ----DVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVC---EYYQKMKE-- 380
Query: 630 IFLSQSRKLLEANKLL-----LFCLEKHHNIDIDMCNTVIE---------------GLCK 669
R L+ + LFC N+ +D+ ++E LC
Sbjct: 381 ------RSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCA 434
Query: 670 MKKLSEAFGLYYELVEKG 687
++ ++AF ++ VE+G
Sbjct: 435 RRRANDAFECSWQTVERG 452
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 109 FFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKS-NGTVKLEDRFFNSLI 167
F++ + + GF N +Y + ++ + RN A + R + TV++ +LI
Sbjct: 232 FYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQI----LTTLI 287
Query: 168 RSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGV 227
G A ++ +LF + G++P +N+L+ L+K G + A V EM G+
Sbjct: 288 HGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEM-EEKGI 346
Query: 228 APDTYTFNILIRGFCKNSMVDDGF----RFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
PD+ TF+ + G K+ + GF ++QKM + P T L+ C G+V
Sbjct: 347 EPDSVTFHSMFIGMMKSK--EFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVN 404
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
++ K M++K P + L C ++ ++A + V++G
Sbjct: 405 LGLDLWKYMLEKG--YCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 152/346 (43%), Gaps = 30/346 (8%)
Query: 174 GLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYT 233
G + + KLF + P V N +L + + S++ EM GV+PD YT
Sbjct: 60 GALKYAHKLFDEIPK----PDVSICNHVLRGSAQSMKPEKTVSLYTEM-EKRGVSPDRYT 114
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
F +++ K +GF F K+ + N L+ G + A +
Sbjct: 115 FTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA 174
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
K + V+++++ GY + IDEA+ +F+EM K + V +N +I G + ++
Sbjct: 175 KAHK------VAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKE 224
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
+D +E+ + E D T N +++G+ N G EAL +F++M + PD T
Sbjct: 225 MDSARELFDRFTE-----KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTIL 279
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRDDG-STPLVAAYKSMFQFLCKNGKTSKAER 472
L+ +GD E ++L+ +L+ + TP+ + ++ K G +A
Sbjct: 280 SLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI---WNALIDMYAKCGSIDRAIE 336
Query: 473 GFRQLMKRGTQDPTSYKILIIG---HCKEGTFEAGYELLVLMLRRN 515
FR + R D +++ LI+G H EG+ E E+ L + N
Sbjct: 337 VFRGVKDR---DLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPN 379
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 157/428 (36%), Gaps = 121/428 (28%)
Query: 133 GRARNLNVARNFLFSIKRKSNGTVKLEDRFF-----------NSLIRSYGRAGLFQESVK 181
G NL+V ++S G +K + F N ++R ++ +++V
Sbjct: 39 GLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVS 98
Query: 182 LFTSMKSVGVSPSVVTF-----------------------------------NSLLLILL 206
L+T M+ GVSP TF N+L+L
Sbjct: 99 LYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHA 158
Query: 207 KRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDI 266
G +A +FD+ + VA ++ + G+ K +D+ R F +M D
Sbjct: 159 NCGDLGIASELFDDSAKAHKVA-----WSSMTSGYAKRGKIDEAMRLFDEMPY----KDQ 209
Query: 267 VTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVF 326
V +N ++ G + ++ +A + +K DVV++ ++ GY EAL +F
Sbjct: 210 VAWNVMITGCLKCKEMDSARELFDRFTEK------DVVTWNAMISGYVNCGYPKEALGIF 263
Query: 327 EEMVDKGLKPNAVT----------------------------------------YNTLIK 346
+EM D G P+ VT +N LI
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 347 GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNG---HCNAGNLNEALKVFEKMMEW 403
+ ID+ EV G + D T NTL+ G H G ++++FE+M
Sbjct: 324 MYAKCGSIDRAIEVFRGVKD-----RDLSTWNTLIVGLALHHAEG----SIEMFEEMQRL 374
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST-PLVAAYKSMFQFLC 462
KV P+ T+ ++ H G + K + L+RD + P + Y M L
Sbjct: 375 KVWPNEVTFIGVILACSHSGRVDEGRKYFS-------LMRDMYNIEPNIKHYGCMVDMLG 427
Query: 463 KNGKTSKA 470
+ G+ +A
Sbjct: 428 RAGQLEEA 435
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 136/334 (40%), Gaps = 56/334 (16%)
Query: 105 KALKFFNWLPQMGFTHNDQ-SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
+A++ F+ +P + DQ ++ +M+ + + ++ AR K T +
Sbjct: 196 EAMRLFDEMP-----YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT-------W 243
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N++I Y G +E++ +F M+ G P VVT SLL G K + +L
Sbjct: 244 NAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILE 303
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
T V+ Y + +N L+D + G +
Sbjct: 304 TASVSSSIYVGTPI-------------------------------WNALIDMYAKCGSID 332
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A V +G+ + D+ ++ TL+ G + + + ++ +FEEM + PN VT+
Sbjct: 333 RAIEVFRGVKDR------DLSTWNTLIVGLAL-HHAEGSIEMFEEMQRLKVWPNEVTFIG 385
Query: 344 LIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
+I ++D+ ++ ++ P+ +++ AG L EA E M
Sbjct: 386 VILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM--- 442
Query: 404 KVQPDSATYSVLVRNLCHI-GDFERAEKLYDELL 436
K++P++ + L+ C I G+ E + ++LL
Sbjct: 443 KIEPNAIVWRTLL-GACKIYGNVELGKYANEKLL 475
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 186/462 (40%), Gaps = 51/462 (11%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N++IR Y R FQ+++ ++++M+ VSP TF LL M + V ++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPD--IVTYNTLVDGVCRAG 280
G D + N LI + K + F+ + P+ IV++ +V + G
Sbjct: 147 RL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL----PERTIVSWTAIVSAYAQNG 201
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK--PNA 338
+ A + M K D+ PD V+ ++L + Q++ + + +V GL+ P+
Sbjct: 202 EPMEALEIFSQMRKM--DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 339 -VTYNTLIK--GLCEVQKI--DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
++ NT+ G KI DK+K SP+ N +++G+ G EA
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMK------------SPNLILWNAMISGYAKNGYAREA 307
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+ +F +M+ V+PD+ + + + +G E+A +Y+ + + RDD V
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD--YRDD-----VFI 360
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLR 513
++ K G A F + + R D + +I+G+ G L M R
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDR---DVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 514 RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHE 573
P+ + L+ G + +M I P + ++ L + G+ +
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 574 SASLV-------------VLLLEGKIRQNVTLSTHTVRLLFS 602
+ ++ LL K ++V L + + LFS
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFS 519
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 124/599 (20%), Positives = 251/599 (41%), Gaps = 80/599 (13%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL--LILLKRGRTNMAKSVF 218
R +NS+I S+ R GL +++ + M GVSP V TF L+ + LK +
Sbjct: 104 RPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK---GIDFL 160
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
+ +S+ G+ + + + LI+ + + +D + F ++ +C V +N +++G +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDC----VIWNVMLNGYAK 216
Query: 279 AGKVKTAHNVVKGM-VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPN 337
G + + V+KG V + + ++P+ V++ +L K ID + + +V G+
Sbjct: 217 CGALDS---VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
N+L+ + + D ++ DT T N +++G+ +G + E+L F
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRA-----DTVTWNCMISGYVQSGLMEESLTFF 328
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
+M+ V PD+ T+S L+ ++ + E ++++ +++ I L ++ L+ AY
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAY--- 385
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTF---------------- 501
F C+ S A+ F Q + D + +I G+ G +
Sbjct: 386 --FKCRG--VSMAQNIFSQC---NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 502 -------------------EAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQT 542
+ G EL ++++ FD I ++ID + G LAY+
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 543 LQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFS 602
+++ K IV +++S++ + + SA++ + G + + L
Sbjct: 499 FERLSKRDIV----SWNSMITRCAQSD--NPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 603 NGLRDKGF--RIVGLLYDNGYMVDM---KELIIFLSQSRKLLEANKLLLFCLEKHHNIDI 657
L + F I G + + D+ LI ++ L A + EK +I
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK----NI 608
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYELVEKGNHQP--LSCLENLRVALEAGGRSKEVEFL 714
N++I KL ++ L++E+VEK +P ++ LE + G + V F
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFF 667
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
++LI Y + G + ++ +F +MK ++V++NS++ G+ + +F EM+
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKE----KNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS-SFNCDPDIVTYNTLVDGVCRAGKV 282
G+ PD TF +I C VD+G RFF+ M+ + P Y +VD RAG++
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
A+ VK M PD + TLL + +N++ A V +++D L P+ Y
Sbjct: 697 TEAYETVKSM-----PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD--LDPSNSGYY 749
Query: 343 TLI 345
LI
Sbjct: 750 VLI 752
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 139/319 (43%), Gaps = 32/319 (10%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFL-FSIKRKSNGTVKLEDRFFN 164
+L+ F WL ++ + N+ + +L ++G L + R F IK+ + +
Sbjct: 425 SLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIG----C 480
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++I Y + G + ++F + +V++NS++ + + A +F +M
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLS----KRDIVSWNSMITRCAQSDNPSAAIDIFRQM-GV 535
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDD------GFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
G+ D + + + C N + GF ++S D+ + +TL+D +
Sbjct: 536 SGICYDCVSISAALSA-CANLPSESFGKAIHGFMIKHSLAS-----DVYSESTLIDMYAK 589
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK-GLKPN 337
G +K A NV K M +K ++VS+ +++ + ++L +F EMV+K G++P+
Sbjct: 590 CGNLKAAMNVFKTMKEK------NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
+T+ +I C V +D+ E G P +++ AG L EA +
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETV 703
Query: 398 EKMMEWKVQPDSATYSVLV 416
+ M PD+ + L+
Sbjct: 704 KSM---PFPPDAGVWGTLL 719
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/501 (18%), Positives = 189/501 (37%), Gaps = 101/501 (20%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK--------------- 207
+N +I Y ++GL +ES+ F M S GV P +TF+SLL + K
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 208 ---------------------RGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSM 246
RG +MA+++F + S D F +I G+ N +
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRG-VSMAQNIFSQCNSV-----DVVVFTAMISGYLHNGL 421
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTL---------------------------------- 272
D F+ + P+ +T ++
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 273 -VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
+D + G++ A+ + + + K+ D+VS+ +++ N A+ +F +M
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKR------DIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
G+ + V+ + + C + + + G + + D + +TL++ + GNL
Sbjct: 536 SGICYDCVSISAALSA-CANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLK 594
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
A+ VF+ M E + +++ ++ + G + + L+ E+++K G P
Sbjct: 595 AAMNVFKTMKEKNI----VSWNSIIAACGNHGKLKDSLCLFHEMVEKS------GIRPDQ 644
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLV 509
+ + C G + R FR + + P Y ++ + G YE +
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 510 LMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
M F PD+ ++ +L+ LA K++ + P+ S ++ +++
Sbjct: 705 SM---PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD--LDPSNSGYYVLISNAHANA 759
Query: 570 YAHESASLVVLLLEGKIRQNV 590
ES + V L++ + Q +
Sbjct: 760 REWESVTKVRSLMKEREVQKI 780
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 173/422 (40%), Gaps = 33/422 (7%)
Query: 156 VKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAK 215
V E NSL+ Y + G F ++ KLF M VT+N ++ ++ G +
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA----DTVTWNCMISGYVQSGLMEESL 325
Query: 216 SVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDG 275
+ F EM+S+ GV PD TF+ L+ K ++ + + + DI + L+D
Sbjct: 326 TFFYEMISS-GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
+ V A N+ S+ + DVV +T ++ GY ++L +F +V +
Sbjct: 385 YFKCRGVSMAQNIF------SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN-TLMNGHCNAGNLNEAL 394
PN +T +++ + + + K+ L G + GF + C + +++ + G +N A
Sbjct: 439 PNEITLVSILPVIGILLAL-KLGRELHGFIIKKGFD-NRCNIGCAVIDMYAKCGRMNLAY 496
Query: 395 KVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAY 454
++FE++ + D +++ ++ + A ++ ++ GI + ++A
Sbjct: 497 EIFERLS----KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA- 551
Query: 455 KSMFQFLCKNGKTSKAERGFRQLMKRGT--QDPTSYKILIIGHCKEGTFEAGYELLVLML 512
C N + + M + + D S LI + K G +A + M
Sbjct: 552 -------CANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 513 RRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKML-KSSIVPTTSTFHSILAGLLKKGYA 571
+N + S+I G+ + +M+ KS I P TF I++ G
Sbjct: 605 EKNIVS----WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 572 HE 573
E
Sbjct: 661 DE 662
>AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9158380-9159897 FORWARD
Length = 505
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 161/369 (43%), Gaps = 33/369 (8%)
Query: 118 FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQ 177
FTH + ML I+G +RN+++ I ++ G V D+ F ++++ A +
Sbjct: 108 FTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKR--GLVN--DKTFRIVLKTLASARELK 163
Query: 178 ESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNIL 237
+ V F M G +V T N + L K AK VF ++ + PD T+ +
Sbjct: 164 KCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEF--IKPDEITYRTM 221
Query: 238 IRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV-KKS 296
I+GFC + + + + M D DI +++ + + + A V MV K+
Sbjct: 222 IQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRG 281
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
DL+ Y ++ C ID A VF+EM ++G+ + +T+ +LI GL +++ +
Sbjct: 282 GDLDGGF--YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVE 339
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
++EG +PD + L+ G +EA +VF KM++ +P TY +L+
Sbjct: 340 AYGLVEGVE-----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLL 394
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
+ H+G R K G PLV + K GK + + +
Sbjct: 395 QG--HLG--RRGRK---------------GPDPLVNFDTIFVGGMIKAGKRLETTKYIER 435
Query: 477 LMKRGTQDP 485
+KRG + P
Sbjct: 436 TLKRGLEVP 444
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 149/328 (45%), Gaps = 38/328 (11%)
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
TF I+++ + +F M+ F ++ T N V+ +C+ V+ A V
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFV---F 204
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQ 352
+K E + PD ++Y T+++G+C ++ EA ++ M+D+G + +++ L +
Sbjct: 205 IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKN 264
Query: 353 KIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATY 412
+ D+ +V + G D +++ C G ++ A KVF++M E V D+ T+
Sbjct: 265 QFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTW 324
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGIL----LRDDGSTPLVAAYKSMFQFLCKNGKTS 468
+ L+ Y L+K+ ++ L + P ++ Y + + L K + S
Sbjct: 325 ASLI---------------YGLLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRAS 369
Query: 469 KAERGFRQLMKRGTQDPT-SYKILIIGHC-KEGTFEAGYELLVLMLRRNFDPDSEIYQSL 526
+A FR++++RG + +Y +L+ GH + G R+ DP
Sbjct: 370 EATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRG-------------RKGPDPLVNFDTIF 416
Query: 527 IDGLLQKGEPLLAYQTLQKMLKSSI-VP 553
+ G+++ G+ L + +++ LK + VP
Sbjct: 417 VGGMIKAGKRLETTKYIERTLKRGLEVP 444
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 119/243 (48%), Gaps = 10/243 (4%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
K + +F+ + G+ +N ++ +E L + + + A+ F+F IK K +K ++ +
Sbjct: 164 KCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAK-FVF-IKLKE--FIKPDEITYR 219
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
++I+ + G E+ KL+ M G + ++ LLK+ + + A VF M+S
Sbjct: 220 TMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSK 279
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
G D + ++I CKN +D + F +M D +T+ +L+ G+ +V
Sbjct: 280 RGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVE 339
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A+ +V+G+ NPD+ Y L++G + EA VF +M+ +G +P TY L
Sbjct: 340 AYGLVEGVE------NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLML 393
Query: 345 IKG 347
++G
Sbjct: 394 LQG 396
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 13/265 (4%)
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGA 364
++ +L+ + + + + F M G N T N ++ LC+ + +++ K V
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL 207
Query: 365 LEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
E PD T T++ G C+ G+L EA K++ MM+ D ++ L
Sbjct: 208 KEF--IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQ 265
Query: 425 FERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ- 483
F+ A K++ ++ K D G Y+ M +LCKNG+ A + F ++ +RG
Sbjct: 266 FDEASKVFYVMVSKRGGDLDGG------FYRVMIDWLCKNGRIDMARKVFDEMRERGVYV 319
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
D ++ LI G + Y L+ + +PD IY LI GL++ A +
Sbjct: 320 DNLTWASLIYGLLVKRRVVEAYGLVEGVE----NPDISIYHGLIKGLVKIKRASEATEVF 375
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKK 568
+KM++ P T+ +L G L +
Sbjct: 376 RKMIQRGCEPIMHTYLMLLQGHLGR 400
>AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19763152-19765136 FORWARD
Length = 495
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 150/337 (44%), Gaps = 35/337 (10%)
Query: 101 KVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLED 160
K P KA + F + G N + Y ++ R+ + A F + KS+ + +
Sbjct: 164 KQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAA--FTLLERMKSSHNCQPDV 221
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTF---------------------- 198
++ LI+S+ + F + L + M+ G+ P+ +TF
Sbjct: 222 HTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITFVEMESTLIQMLGEDDCKPDSWT 281
Query: 199 -NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM 257
NS L G+ M ++ +++ S+ G+ P+ TFNIL+ + K+ + M
Sbjct: 282 MNSTLRAFGGNGQIEMMENCYEKFQSS-GIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM 340
Query: 258 SSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQ 317
++ IVTYN ++D RAG +K + + M +SE + P V+ +L+R Y
Sbjct: 341 QKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLM--QSERIFPSCVTLCSLVRAYGRAS 398
Query: 318 NIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTL 377
D+ V + + ++ + V +N L+ ++K ++K VLE +E GF PD T
Sbjct: 399 KADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLE-LMEKKGFKPDKITY 457
Query: 378 NTLMNGHCNAG---NLNEALKVFEKMMEWKV---QPD 408
T++ + +G ++ E V E + E +V +PD
Sbjct: 458 RTMVKAYRISGMTTHVKELHGVVESVGEAQVVVKKPD 494
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 168/387 (43%), Gaps = 32/387 (8%)
Query: 147 SIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMK-SVGVSPSVVTFNSLLLIL 205
SI K G+ KL R + A ++ ++++F ++ + P+V + L+++L
Sbjct: 101 SIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVML 160
Query: 206 LKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM-SSFNCDP 264
K + A +F EM++ G + + L+ + ++ D F ++M SS NC P
Sbjct: 161 GKCKQPEKAHELFQEMINE-GCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQP 219
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
D+ TY+ L+ + +++ M + + + P+ +++ ++
Sbjct: 220 DVHTYSILIKSFLQVFAFDKVQDLLSDM--RRQGIRPNTITF------------VEMEST 265
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+ + + + KP++ T N+ ++ +I+ ++ E + G P+ T N L++ +
Sbjct: 266 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYE-KFQSSGIEPNIRTFNILLDSY 324
Query: 385 CNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD 444
+GN + V E M ++ TY+V++ GD ++ E L+ + + I
Sbjct: 325 GKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSC 384
Query: 445 DGSTPLVAAYKSMFQFLCKNGKTSKAER--GFRQLMKRGT--QDPTSYKILIIGHCKEGT 500
LV AY G+ SKA++ G + ++ D + L+ + +
Sbjct: 385 VTLCSLVRAY----------GRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEK 434
Query: 501 FEAGYELLVLMLRRNFDPDSEIYQSLI 527
F +L LM ++ F PD Y++++
Sbjct: 435 FAEMKGVLELMEKKGFKPDKITYRTMV 461
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 126/293 (43%), Gaps = 32/293 (10%)
Query: 320 DEALVVFEEMVDK-GLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
+ A+ VFE + ++ KPN Y LI L + ++ +K E+ + + G C +N
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEG------CVVN 184
Query: 379 -----TLMNGHCNAGNLNEALKVFEKM-MEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
L++ + +G + A + E+M QPD TYS+L+++ + F++ + L
Sbjct: 185 HEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 244
Query: 433 DELLKKGI----------------LLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
++ ++GI +L +D P S + NG+ E + +
Sbjct: 245 SDMRRQGIRPNTITFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 304
Query: 477 LMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
G + + ++ IL+ + K G ++ ++ M + ++ Y +ID + G+
Sbjct: 305 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD 364
Query: 536 PLLAYQTLQKMLKSS-IVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIR 587
L + L ++++S I P+ T S++ + A + ++ + IR
Sbjct: 365 -LKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 416
>AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G27300.1); Has 11283 Blast hits to 3897
proteins in 129 species: Archae - 1; Bacteria - 2;
Metazoa - 118; Fungi - 74; Plants - 10832; Viruses - 0;
Other Eukaryotes - 256 (source: NCBI BLink). |
chr2:11849789-11851351 REVERSE
Length = 442
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 50/247 (20%)
Query: 163 FNSLIRSYGRAGLFQE-----------------------------------SVKLFTSM- 186
++ IR G A ++QE +V +F M
Sbjct: 175 YHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMV 234
Query: 187 --KSVGVSPSVVTFNSLLLILLKRGRTN--------MAKSVFDEMLSTYGVAPDTYTFNI 236
K++ P++ T++ L LL RG + +S+F +M+ + G+ PD + N
Sbjct: 235 TSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDS-GIEPDVFALNC 293
Query: 237 LIRGFCKNSMVDDGFRFFQKMS-SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKK 295
L++G+ + V+D R F +MS ++C+P+ TY+ L+ G+C G+ A ++ M K
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEM--K 351
Query: 296 SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
+ P+ SY +L+ + + ID+A+ EM++ G + ++Y TL+ C K D
Sbjct: 352 GKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYD 411
Query: 356 KIKEVLE 362
+ +LE
Sbjct: 412 EATRLLE 418
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 112/282 (39%), Gaps = 58/282 (20%)
Query: 103 PSKALKFFNWLPQMG-FTHNDQSYFLMLEILGRAR---NLNVARNFLFSIKRKSNGTVKL 158
P FNW Q FTH + SY + + LG A+ ++ N + S++ N
Sbjct: 152 PFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGN----- 206
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSM---KSVGVSPSVVTFNSLLLILLKRG------ 209
+ +NS+I + +AG +V +F M K++ P++ T++ L LL RG
Sbjct: 207 -ENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 210 -------------------------------------RTNMAKSVFDEMLSTYGVAPDTY 232
N A +F +M Y P+++
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSF 325
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGM 292
T++ LI G C + +M P+ +YN+LV+ +G++ A + M
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL 334
++ + D +SY TL+ C K DEA + E + +K L
Sbjct: 386 IENGRVV--DFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
+Y+ I+ L + ++ +++ L V + N+++ AG L A+ +F
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENL-YNSIIFYFTKAGKLIRAVNIFRH 232
Query: 400 MMEWK---VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLR---DDGSTPLVAA 453
M+ K +P TY +L + L G+ +Y E ++ L R D G P V A
Sbjct: 233 MVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRS--LFRQMVDSGIEPDVFA 290
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLM 511
+ + + + A R F Q+ +P S Y LI G C +G ELL M
Sbjct: 291 LNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEM 350
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
+ F P+ + Y SL++ GE A + L +M+++ V ++ +++ +KG
Sbjct: 351 KGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKY 410
Query: 572 HESASLVVLLLEGKI 586
E+ L+ +L E ++
Sbjct: 411 DEATRLLEMLREKQL 425
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 160/386 (41%), Gaps = 27/386 (6%)
Query: 96 VLRLIKV----PSKALKFFNWL----PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFS 147
V+R++K P KAL FF+W+ G+ H+ +Y L +L R N F
Sbjct: 229 VIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARP---NSVAEFWSV 285
Query: 148 IKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLK 207
+ ++ + + R + ++ + E+VKL+ M PS+ SLLL L
Sbjct: 286 VDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQD-CSLLLRYLS 344
Query: 208 RGRTNMAKSVF--DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPD 265
VF + G + ++ + R D+ + M + +PD
Sbjct: 345 GSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPD 404
Query: 266 IVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVV 325
+TY+ LV G+C+A +++ A V+ M +++ PD+ ++T L++G+C +D+AL
Sbjct: 405 NITYSQLVFGLCKAKRLEEARGVLDQM--EAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 326 FEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHC 385
F M++KG ++ + LI G K + L ++ P T L++
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Query: 386 NAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDD 445
EAL + + M K Q A L G E A+K D L K
Sbjct: 523 KIKKSEEALDLLQMM---KKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSK------- 572
Query: 446 GSTPLVAAYKSMFQFLCKNGKTSKAE 471
+P AAY + + + G+ + A+
Sbjct: 573 -DSPSFAAYFHVIEAFYREGRLTDAK 597
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 153/344 (44%), Gaps = 17/344 (4%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
S VT+N+ L +L + SV DEM T G D T+ + R F K+ M+ + +
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEM-KTAGYDMDLDTYIKVSRQFQKSRMMAETVKL 320
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDV--VSYTTLLR 311
++ M P I + L+ + +G ++V + +K E + Y + R
Sbjct: 321 YEYMMDGPFKPSIQDCSLLLRYL--SGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFS 371
DEA + + M + G +P+ +TY+ L+ GLC+ +++++ + VL+ +E G
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLD-QMEAQGCF 437
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKL 431
PD T L+ GHC L++AL F M+E DS VL+ FE A
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 432 YDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKIL 491
E++K P + YK + L K K+ +A Q+MK+ Q+ +Y
Sbjct: 498 LMEMVKNA------NVKPWQSTYKLLIDKLLKIKKSEEA-LDLLQMMKK--QNYPAYAEA 548
Query: 492 IIGH-CKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
G+ K GT E + L ++ ++ P Y +I+ ++G
Sbjct: 549 FDGYLAKFGTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREG 591
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 215/536 (40%), Gaps = 71/536 (13%)
Query: 92 TGFQVLR-LIKVPSKALKFFNW-LPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIK 149
T VLR L K P KA F +W L G + + Y +ML IL + R++ + F +++
Sbjct: 91 TAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSM---KRFWMTLR 147
Query: 150 RKSNGTVKLEDRFFNSLIRSYGR-------------AGLFQESVKLFTSMKSVGVSPSVV 196
G L++ + ++ YG A ++ +K G +VV
Sbjct: 148 EMKQGGFYLDEDTYKTI---YGELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVV 204
Query: 197 T-------------------FNSLLLILLKRGRTNMAKSV-----FDEMLSTYGVAPDTY 232
T ++ ++ +LK R + K++ S+ G T
Sbjct: 205 TKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTV 264
Query: 233 TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY----NTLVDGVCRAGKVKTAHNV 288
T+N +R + + V + + +M + D D+ TY A VK +
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 289 VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV--VFEEMVDKGLKPNAVTYNTLIK 346
+ G K P + + LLR N D LV V + G + Y+ + +
Sbjct: 325 MDGPFK------PSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 347 GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQ 406
L V + D+ +E+ + A+ G+ PD T + L+ G C A L EA V ++M
Sbjct: 379 SLTSVGRFDEAEEITK-AMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 407 PDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGK 466
PD T+++L++ C + ++A + +L+KG + + L+ F+ N K
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDG------FVIHN-K 490
Query: 467 TSKAERGFRQLMKRGTQDP--TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQ 524
A +++K P ++YK+LI K E +LL +M ++N+ Y
Sbjct: 491 FEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNY----PAYA 546
Query: 525 SLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
DG L K L + +L S P+ + + ++ ++G ++ +L+ +
Sbjct: 547 EAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFI 602
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 190/428 (44%), Gaps = 37/428 (8%)
Query: 199 NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS 258
N L + L+R +A++V ++ T+G P + N LI +CK+S ++ + F ++S
Sbjct: 18 NLRLCLPLRRTSLQLARAVHGNII-TFGFQPRAHILNRLIDVYCKSSELNYARQLFDEIS 76
Query: 259 SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQN 318
+PD + T+V G C +G + A +G+ +K+ D V Y ++ G+ +
Sbjct: 77 ----EPDKIARTTMVSGYCASGDITLA----RGVFEKAPVCMRDTVMYNAMITGFSHNND 128
Query: 319 IDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLN 378
A+ +F +M +G KP+ T+ +++ GL V +K A G T N
Sbjct: 129 GYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSN 188
Query: 379 TLMNGHCNAGN----LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE 434
L++ + + L+ A KVF++++E D +++ ++ G F+ E+L +
Sbjct: 189 ALVSVYSKCASSPSLLHSARKVFDEILE----KDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 435 LLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILII 493
+ D + LV AY +M G +A R+++ G + D +Y +I
Sbjct: 245 M---------DDNMKLV-AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
G + G ++ +LRR D SL+ + G+ A +KM +V
Sbjct: 295 ACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV- 352
Query: 554 TTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIV 613
+++++L+G + G+ E+ L+ + +N+ + L NG ++G ++
Sbjct: 353 ---SWNALLSGYVSSGHIGEAK----LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 614 GLLYDNGY 621
+ G+
Sbjct: 406 SCMKREGF 413
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 151/376 (40%), Gaps = 58/376 (15%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N++I Y G +QE++++ M S G+ T+ S++ G + K V
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV----- 308
Query: 223 STYGVAPDTYTF---NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
Y + + ++F N L+ + K D+ F+KM + D+V++N L+ G +
Sbjct: 309 HAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA----KDLVSWNALLSGYVSS 364
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
G + A + K M +K +++S+ ++ G +E L +F M +G +P
Sbjct: 365 GHIGEAKLIFKEMKEK------NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
++ IK C V + L GF N L+ + G + EA +VF
Sbjct: 419 AFSGAIKS-CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRT 477
Query: 400 MMEWKVQP--DSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL---------------- 441
M P DS +++ L+ L G A +Y+E+LKKGI
Sbjct: 478 M------PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHA 531
Query: 442 -LRDDGS------------TPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSY 488
L D G P Y + LC++GK S AE L + T + +
Sbjct: 532 GLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE--IW 589
Query: 489 KILIIGHCKEGTFEAG 504
+ L+ G G E G
Sbjct: 590 EALLSGCRVHGNMELG 605
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 167/439 (38%), Gaps = 49/439 (11%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N++I + ++ LF MK G P TF S+L L F
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAA 175
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
G T N L+ + K + +K+ + D ++ T++ G + G
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF 235
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+++GM D N +V+Y ++ GY + EAL + MV G++ + TY
Sbjct: 236 DLGEELLEGM-----DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
++I+ + K+V L FS N+L++ + G +EA +FEKM
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFH--FDNSLVSLYYKCGKFDEARAIFEKM-- 346
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL--------------------- 441
D +++ L+ G A+ ++ E+ +K IL
Sbjct: 347 --PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 442 ---LRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSY-KILIIGHCK 497
++ +G P A+ + G ++ QL+K G S LI + K
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 498 EGTFEAGYELLVLMLRRNFDP--DSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTT 555
G E ++ M P DS + +LI L Q G A ++MLK I P
Sbjct: 465 CGVVEEARQVFRTM------PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDR 518
Query: 556 STFHSIL-----AGLLKKG 569
T ++L AGL+ +G
Sbjct: 519 ITLLTVLTACSHAGLVDQG 537
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/451 (19%), Positives = 173/451 (38%), Gaps = 85/451 (18%)
Query: 188 SVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV 247
+ G P N L+ + K N A+ +FDE+ PD ++ G+C + +
Sbjct: 42 TFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISE-----PDKIARTTMVSGYCASGDI 96
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
F+K C D V YN ++ G +A N+ M K E PD ++
Sbjct: 97 TLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKM--KHEGFKPDNFTFA 152
Query: 308 TLLRGYCMKQNIDEALVVFE------------------------------------EMVD 331
++L G + + ++ V F ++ D
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
+ L+ + ++ T++ G + D +E+LEG + + N +++G+ N G
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD----NMKLVAYNAMISGYVNRGFYQ 268
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS---- 447
EAL++ +M+ ++ D TY ++R G + ++++ +L+ R+D S
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-----REDFSFHFD 323
Query: 448 TPLVAAY---------KSMFQFL---------------CKNGKTSKAERGFRQLMKRGTQ 483
LV+ Y +++F+ + +G +A+ F+++ ++
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI- 382
Query: 484 DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTL 543
S+ I+I G + G E G +L M R F+P + I G Q
Sbjct: 383 --LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 544 QKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
++LK + S ++++ K G E+
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEA 471
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 129/329 (39%), Gaps = 59/329 (17%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
F NSL+ Y + G F E+ +F M + +V++N+LL + G AK +F E
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPA----KDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP---------------- 264
M + ++ I+I G +N ++G + F M +P
Sbjct: 377 MKEK-----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 265 -------------------DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNP--DV 303
+ N L+ + G V+ A V + M P D
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM--------PCLDS 483
Query: 304 VSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEG 363
VS+ L+ + EA+ V+EEM+ KG++P+ +T T++ +D+ ++ +
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
V P L++ C +G ++A V E + +P + + L+ G
Sbjct: 544 METVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL---PFKPTAEIWEALLSGCRVHG 600
Query: 424 DFERAEKLYDELLKKGILLRDDGSTPLVA 452
+ E D+L G++ DG+ L++
Sbjct: 601 NMELGIIAADKLF--GLIPEHDGTYMLLS 627
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/527 (21%), Positives = 203/527 (38%), Gaps = 101/527 (19%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVS--PSVVTF---------------------- 198
+N +IR Y R GL+ +++ +F M S GV P T+
Sbjct: 83 YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGR 142
Query: 199 -------------NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNS 245
N+LL + + G+ MA+ VFD M + D ++N +I G+ +N
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR-----DVISWNTMISGYYRNG 197
Query: 246 MVDDGFRFFQKMSSFNCDPDIVTY-----------------------------------N 270
++D F M + + D D T N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 271 TLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMV 330
LV+ + G++ A V M ++ DV+++T ++ GY +++ AL + M
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERR------DVITWTCMINGYTEDGDVENALELCRLMQ 311
Query: 331 DKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
+G++PNAVT +L+ + K++ K + A+ +S D +L++ + +
Sbjct: 312 FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS-DIIIETSLISMYAKCKRV 370
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+ +VF ++ P SA + V+N +L + L +R + P
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGCVQN-----------ELVSDALGLFKRMRREDVEPN 419
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRG---TQDPTSYKILIIGHCKEGTFEAGYEL 507
+A S+ +A L K G + D + + + C GT E+ +++
Sbjct: 420 IATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC--GTLESAHKI 477
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
+ ++ D ++ +LI G G+ A Q +M++S + P TF S L
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
Query: 568 KGYAHESASLVVLLLEG-KIRQNVTLSTHTVRLLFSNGLRDKGFRIV 613
G E +L +LE K T V LL G D+ + ++
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLI 584
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 145/364 (39%), Gaps = 44/364 (12%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRK--------SNGTVK 157
AL F+W+ + + ML + G ++L + RN ++ K N V
Sbjct: 202 ALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 158 L--------EDRF------------FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVT 197
+ E RF + +I Y G + +++L M+ GV P+ VT
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 198 FNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNI----LIRGFCKNSMVDDGFRF 253
SL+ + + N K L + V Y+ I LI + K VD FR
Sbjct: 322 IASLVSVCGDALKVNDGKC-----LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
F S ++ P ++ ++ G + V A + K M + ED+ P++ + +LL Y
Sbjct: 377 FSGASKYHTGP----WSAIIAGCVQNELVSDALGLFKRM--RREDVEPNIATLNSLLPAY 430
Query: 314 CMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPD 373
++ +A+ + + G + L+ + ++ ++ G E S D
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK-SKD 489
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYD 433
L++G+ G+ + AL+VF +M+ V P+ T++ + H G E L+
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 434 ELLK 437
+L+
Sbjct: 550 FMLE 553
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 179/454 (39%), Gaps = 82/454 (18%)
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK--PNAVTYNTLIKGLCEVQKIDKIKEV 360
++SY ++R Y + +A+ VF MV +G+K P+ TY + K E++ + K+ V
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSM-KLGLV 138
Query: 361 LEGALEVGGF-------------------------------SPDTCTLNTLMNGHCNAGN 389
+ G + F + D + NT+++G+ G
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
+N+AL +F+ M+ V D AT ++ H+ D E ++ + +K + + +
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLV 509
LV Y K G+ +A F ++ +R D ++ +I G+ ++G E EL
Sbjct: 259 LVNMY-------LKCGRMDEARFVFDRMERR---DVITWTCMINGYTEDGDVENALELCR 308
Query: 510 LMLRRNFDPDSEIYQSLI----DGL-LQKGEPLLAYQTLQKMLKSSIVPTT--------- 555
LM P++ SL+ D L + G+ L + Q++ I+ T+
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 556 ------------STFH-----SILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVR 598
S +H +I+AG ++ ++ L + + N+ +T
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI--ATLNSL 426
Query: 599 LLFSNGLRD--KGFRIVGLLYDNGYMVDMKE---LIIFLSQSRKLLEANKLLLFCLEKHH 653
L L D + I L G+M + L+ S+ L A+K+ EKH
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 654 NIDIDMCNTVIEGLCKMKKLSEAFGLYYELVEKG 687
+ D+ + +I G A ++ E+V G
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 13/186 (6%)
Query: 180 VKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIR 239
++LF M G+ + VT+ +L+ L + G +MA+ +F EM+S GV PD T+NIL+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD-GVPPDIMTYNILLD 59
Query: 240 GFCKN---------SMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVK 290
G CKN V+DG+ F +S P++VTY T++ G C+ G + A+ + +
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 291 GMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCE 350
M K + PD +Y TL+R + + + + +EM +A TY L+ +
Sbjct: 120 KM--KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLH 176
Query: 351 VQKIDK 356
++DK
Sbjct: 177 DGRLDK 182
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 8/142 (5%)
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK---IK 358
+ V+YTTL++G + D A +F+EMV G+ P+ +TYN L+ GLC+ K++K
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 359 EVLEG-----ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
+V +G +L + G P+ T T+++G C G EA +F KM E PDS TY+
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 414 VLVRNLCHIGDFERAEKLYDEL 435
L+R GD + +L E+
Sbjct: 135 TLIRAHLRDGDKAASAELIKEM 156
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERA 428
G +T T TL+ G AG+ + A ++F++M+ V PD TY++L+ LC G E+A
Sbjct: 11 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKA 70
Query: 429 ------EKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGT 482
E +D L G P V Y +M CK G +A FR++ + G
Sbjct: 71 LVAGKVEDGWDLFCS----LSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 483 -QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY----QSLIDGLLQKG 534
D +Y LI H ++G A EL+ M F D+ Y L DG L KG
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKG 183
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+F EM +GL N VTY TLI+GL + D +E+ + + G PD T N L++G
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK-EMVSDGVPPDIMTYNILLDGL 61
Query: 385 CNAGNLNEALKVFEKMMEWK---------VQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
C G L +AL + W V+P+ TY+ ++ C G E A L+ +
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK- 120
Query: 436 LKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMK-RGTQDPTSYKILIIG 494
+++DG P Y ++ + ++G + + +++ R D ++Y L+
Sbjct: 121 ------MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTD 173
Query: 495 HCKEGTFEAGY 505
+G + G+
Sbjct: 174 MLHDGRLDKGF 184
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN---MAKSVFD 219
+ +LI+ +AG + ++F M S GV P ++T+N LL L K G+ +A V D
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVED 78
Query: 220 EM-----LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVD 274
LS GV P+ T+ +I GFCK ++ + F+KM PD TYNTL+
Sbjct: 79 GWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
Query: 275 GVCRAGKVKTAHNVVKGM 292
R G + ++K M
Sbjct: 139 AHLRDGDKAASAELIKEM 156
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 33/217 (15%)
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+++F +M + + ++ TY+ L++ L GD + A++++ E++ DG P +
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS-------DGVPPDIMT 53
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLR 513
Y + LCKNGK KA L+ G E G++L +
Sbjct: 54 YNILLDGLCKNGKLEKA--------------------LVAGK-----VEDGWDLFCSLSL 88
Query: 514 RNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHE 573
+ P+ Y ++I G +KG AY +KM + +P + T+++++ L+ G
Sbjct: 89 KGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 148
Query: 574 SASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGF 610
SA L+ + + + + + V + +G DKGF
Sbjct: 149 SAELIKEMRSCRFAGDAS-TYGLVTDMLHDGRLDKGF 184
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 187/435 (42%), Gaps = 29/435 (6%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN++I+ Y G ES+ F+SMKS G+ T+ LL K V E++
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
T G ++ + + D + F +MS N +V +N ++ G C +G V
Sbjct: 130 RT-GFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERN----VVVWNLMIRGFCDSGDV 184
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ ++ K M ++S +VS+ +++ EAL +F EM+D+G P+ T
Sbjct: 185 ERGLHLFKQMSERS------IVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
T++ + +D K + A G F N L++ +C +G+L A +F KM
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQR 298
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
V +++ L+ G E L+D ++++G + P A + +
Sbjct: 299 RNV----VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKV------APNEATFLGVLACCS 348
Query: 463 KNGKTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
G+ + E F +M+R + + Y ++ + G ++ L M + ++
Sbjct: 349 YTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM---PVNANA 405
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLL-KKGYAHESASLVV 579
++ SL+ G+ LA +++K I P S + +L+ L ++G + +
Sbjct: 406 AMWGSLLSACRSHGDVKLAEVAAMELVK--IEPGNSGNYVLLSNLYAEEGRWQDVEKVRT 463
Query: 580 LLLEGKIRQNVTLST 594
L+ + ++R++ ST
Sbjct: 464 LMKKNRLRKSTGQST 478
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/513 (21%), Positives = 200/513 (38%), Gaps = 88/513 (17%)
Query: 141 ARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNS 200
+RN + +KR G + + L+R + F+E+V ++ M + G+ PS S
Sbjct: 319 SRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTS 378
Query: 201 LL---------------------------------LILL--KRGRTNMAKSVFDEMLSTY 225
+L L+ L + G +AK FD++
Sbjct: 379 VLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDI---- 434
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
+T ++N L+ G+ ++ +D+ R F K+ + D V++N ++ + G + A
Sbjct: 435 -AEKNTVSWNSLLHGYLESGELDEARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNA 489
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++ M KS S+ L+ GY + + A F+ M K N V++ T+I
Sbjct: 490 CSLFSAMPLKSP------ASWNILIGGYVNCREMKLARTYFDAMPQK----NGVSWITMI 539
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK- 404
G ++ + +E+ + D + ++ + G +ALK+F +M+E
Sbjct: 540 SGYTKLGDVQSAEELFRLMSK-----KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNS 594
Query: 405 -VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCK 463
+QPD T S +V +G+ + + + GI + D ST L+ Y K
Sbjct: 595 YIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLY-------MK 647
Query: 464 NGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
G +KA + F L K+ D SY +I+G G L M+ + P+ +
Sbjct: 648 GGDFAKAFKMFSNLNKK---DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 704
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLV----- 578
L+ G Y+ M ++ P+ + ++ L + G E+ L+
Sbjct: 705 TGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPM 764
Query: 579 --------VLLLEGKIRQNVTLS----THTVRL 599
LLL + NV +H V+L
Sbjct: 765 QPNAGVWGALLLASGLHNNVEFGEIACSHCVKL 797
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 119/259 (45%), Gaps = 20/259 (7%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A +F+ +PQ N S+ M+ + ++ A LF + K + V +++
Sbjct: 520 ARTYFDAMPQ----KNGVSWITMISGYTKLGDVQSAEE-LFRLMSKKDKLV------YDA 568
Query: 166 LIRSYGRAGLFQESVKLFTSM--KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+I Y + G ++++KLF M ++ + P +T +S++ + G T+ V + ++
Sbjct: 569 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESYIT 627
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+G+ D LI + K F+ F ++ D V+Y+ ++ G G
Sbjct: 628 EHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN----KKDTVSYSAMIMGCGINGMAT 683
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A+++ M++K + P+VV++T LL Y + E F M D L+P+A Y
Sbjct: 684 EANSLFTAMIEK--KIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGI 741
Query: 344 LIKGLCEVQKIDKIKEVLE 362
++ L ++++ E+++
Sbjct: 742 MVDMLGRAGRLEEAYELIK 760
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 161/383 (42%), Gaps = 57/383 (14%)
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVL 361
D S+ L+R + E + V+ +M + G+ P++ ++++ +++ + K +
Sbjct: 337 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 396
Query: 362 EGALE-------------VGGFS-----------------PDTCTLNTLMNGHCNAGNLN 391
AL+ VG +S +T + N+L++G+ +G L+
Sbjct: 397 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 456
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGS-TPL 450
EA +VF+K+ E D+ ++++++ + GD A L+ + L+ S L
Sbjct: 457 EARRVFDKIPE----KDAVSWNLIISSYAKKGDMGNACSLFS-----AMPLKSPASWNIL 507
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVL 510
+ Y N + K R + M + ++ S+ +I G+ K G ++ EL L
Sbjct: 508 IGGY--------VNCREMKLARTYFDAMPQ--KNGVSWITMISGYTKLGDVQSAEELFRL 557
Query: 511 MLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLK--SSIVPTTSTFHSILAGLLKK 568
M ++ D +Y ++I Q G+P A + +ML+ S I P T S+++ +
Sbjct: 558 MSKK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQL 613
Query: 569 GYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKEL 628
G + + E I+ + LST + L G K F++ L + V +
Sbjct: 614 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL-NKKDTVSYSAM 672
Query: 629 IIFLSQSRKLLEANKLLLFCLEK 651
I+ + EAN L +EK
Sbjct: 673 IMGCGINGMATEANSLFTAMIEK 695
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 197/475 (41%), Gaps = 49/475 (10%)
Query: 95 QVLRLIKVPSKALKFFNWLP-QMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSN 153
Q L+++K AL F W Q + +D+ Y ++ + LN R+F+
Sbjct: 177 QSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFD------GLNQGRDFV-------- 222
Query: 154 GTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNM 213
G LF+E V+ +S + S +N ++ L K + +
Sbjct: 223 -----------------GIQSLFEEMVQDSSSHGDL----SFNAYNQVIQYLAKAEKLEV 261
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A F + + G DT T+N L+ F + F ++ M + D TY ++
Sbjct: 262 AFCCFKKAQES-GCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELII 320
Query: 274 DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG 333
+ ++G++ A + + M K L P +++L+ +D ++ V+ EM G
Sbjct: 321 PSLAKSGRLDAAFKLFQQM--KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+P+A + +LI + K+D + + ++ GF P+ ++ H +G L A
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWD-EMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+ VF+ M + P +TYS L+ G + A K+Y+ + G+ P +++
Sbjct: 438 MTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL-------RPGLSS 490
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLML 512
Y S+ L A + ++ G + D + +L+I + K+ + + + L M
Sbjct: 491 YISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMG 549
Query: 513 RRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
++ I + L + ++ G A L+ ++ S+ + SILA L++
Sbjct: 550 SSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 16/339 (4%)
Query: 293 VKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG-----LKPNAVTYNTLIKG 347
KK P Y L G ++ +FEEMV L NA YN +I+
Sbjct: 195 AKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNA--YNQVIQY 252
Query: 348 LCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQP 407
L + +K++ + A E G DT T N LM N G +A +++E M +
Sbjct: 253 LAKAEKLEVAFCCFKKAQE-SGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLL 311
Query: 408 DSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKT 467
D +TY +++ +L G + A KL+ ++ ++ + P + + S+ + K G+
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKL-------RPSFSVFSSLVDSMGKAGRL 364
Query: 468 SKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSL 526
+ + + ++ G + T + LI + K G + L M + F P+ +Y +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 527 IDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKI 586
I+ + G+ +A + M K+ +PT ST+ +L G + + + +
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 587 RQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDM 625
R ++ + LL + L D +I+ + GY VD+
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
>AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076) |
chr3:11238421-11240125 FORWARD
Length = 540
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 187/456 (41%), Gaps = 66/456 (14%)
Query: 158 LEDRFFNSL---IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMA 214
LE+R +L +R R + +++LF SM+ +G+ P+ NS L LL+ G A
Sbjct: 102 LEERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKA 161
Query: 215 KSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP------DIVT 268
+VF+ M V TY+ ++++ + + R F+++ +P D+V
Sbjct: 162 FTVFEFMRKKENVTGHTYS--LMLKAVAEVKGCESALRMFRELER---EPKRRSCFDVVL 216
Query: 269 YNT-----------------------------------LVDGVCRAGKVKTAHNVVKGMV 293
YNT LV R G+ + A +V MV
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMV 276
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
L D + ++ ++ D AL +F+ M+ KG+KPN V NTLI L + K
Sbjct: 277 NNKISLREDAM--YAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGK 334
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM-EWKVQPDSATY 412
+ + +V L+ G PD T N L+ A + L++F+ + E + Y
Sbjct: 335 VGLVFKVY-SVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLY 393
Query: 413 SVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
+ + + +G +E+A KL E+ G+ + +++A C+ + SK
Sbjct: 394 NTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISA--------CEKSRKSKVAL 445
Query: 473 GFRQLMKRGTQDPTSYKIL-IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
+ M + P ++ L ++ C G+ E ++ + +PD +Y + I G+
Sbjct: 446 LVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL----KKVEPDVSLYNAAIHGMC 501
Query: 532 QKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
+ E A + KM + + P T +L L K
Sbjct: 502 LRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 153/341 (44%), Gaps = 17/341 (4%)
Query: 123 QSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKL 182
+Y LML+ + + A ++R+ + +N+ I GR E+ ++
Sbjct: 177 HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERI 236
Query: 183 FTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFC 242
+ MK G + +T++ L+ I ++ GR+ +A V+DEM++ ++ +I
Sbjct: 237 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNN-KISLREDAMYAMISACT 295
Query: 243 KNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPD 302
K D + FQ M P++V NTL++ + +AGKV V V KS PD
Sbjct: 296 KEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYS--VLKSLGHKPD 353
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKP-NAVTYNTLIKGLCEVQKIDKIKEVL 361
++ LL ++ L +F+ + + L N YNT + ++ +K ++L
Sbjct: 354 EYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLL 413
Query: 362 EGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCH 421
+E G + T + N +++ + AL V+E M + +P++ TY LVR+ C
Sbjct: 414 Y-EMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CI 471
Query: 422 IGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
G L+DE+ + IL + + P V+ Y + +C
Sbjct: 472 WGS------LWDEV--EDILKKVE---PDVSLYNAAIHGMC 501
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 42/225 (18%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM-- 221
N+LI S G+AG K+++ +KS+G P T+N+LL L K R +FD +
Sbjct: 323 NTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRS 382
Query: 222 -----LSTY----------------------------GVAPDTYTFNILIRGFCKNSMVD 248
L+ Y G+ T ++N++I K+
Sbjct: 383 ENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSK 442
Query: 249 DGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTT 308
++ M+ +C P+ TY +LV C G + + V+ ++KK E PDV Y
Sbjct: 443 VALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSL---WDEVEDILKKVE---PDVSLYNA 495
Query: 309 LLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQK 353
+ G C+++ A ++ +M + GL+P+ T +++ L + QK
Sbjct: 496 AIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKKHQK 540
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 157/395 (39%), Gaps = 37/395 (9%)
Query: 156 VKLEDR---FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTN 212
+ +EDR ++++I SY +AG E++ LF M + + P+ VT S+L +G
Sbjct: 359 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL-----QGCAG 413
Query: 213 MAKSVFDEMLSTYGVAPDTY----TFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVT 268
+A S + + Y + D T +I + K + F+++ D V
Sbjct: 414 VAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI----KDAVA 469
Query: 269 YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEE 328
+N L G + G A +V K M K + PD + +L+ + V+ +
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNM--KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 329 MVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAG 388
++ G + LI K D + + + GF T + N +MNG+ G
Sbjct: 528 IIKHGFDSECHVAHALINMF---TKCDALAAAIV-LFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 389 NLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGST 448
EA+ F +M K QP++ T+ +VR + ++ L++ G +
Sbjct: 584 QAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGN 643
Query: 449 PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELL 508
LV Y K G +E+ F ++ + S+ ++ + G L
Sbjct: 644 SLVDMYA-------KCGMIESSEKCFIEISNKYI---VSWNTMLSAYAAHGLASCAVSLF 693
Query: 509 VLMLRRNFDPDSEIYQSLID-----GLLQKGEPLL 538
+ M PDS + S++ GL+++G+ +
Sbjct: 694 LSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIF 728
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 177/438 (40%), Gaps = 56/438 (12%)
Query: 164 NSLIRSYGRAGLFQE---SVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
N LI +Y LFQ S +F S++ P VV +NS++ + G A F
Sbjct: 37 NQLINAYS---LFQRQDLSRVIFDSVRD----PGVVLWNSMIRGYTRAGLHREALGFFGY 89
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSM-VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
M G+ PD Y+F ++ C SM G R ++ + D+ LV+ C+A
Sbjct: 90 MSEEKGIDPDKYSFTFALKA-CAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKA 148
Query: 280 GKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
+ +A V M K DVV++ T++ G AL++F +M + + V
Sbjct: 149 RDLVSARQVFDKMHVK------DVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHV 202
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
+ LI + +++K D + L G + GF + L++ +CN +L A VFE+
Sbjct: 203 SLYNLIPAVSKLEKSD-VCRCLHGLVIKKGFIFAFSS--GLIDMYCNCADLYAAESVFEE 259
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL------------------------ 435
+ W+ D +++ ++ H G FE +L+D +
Sbjct: 260 V--WR--KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 436 LKKGILLRD----DGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKIL 491
L KGI + D G V+ S+ K G+ AE+ F + R D S+ +
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR---DVVSWSAM 372
Query: 492 IIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSI 551
I + + G + L M+R + P++ S++ G L +K+ I
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI 432
Query: 552 VPTTSTFHSILAGLLKKG 569
T ++++ K G
Sbjct: 433 ESELETATAVISMYAKCG 450
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/471 (19%), Positives = 183/471 (38%), Gaps = 92/471 (19%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
NS+ + + + + + ++L+ G+ P +F +++ GR + +F ++
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFP---VVIKSAGRFGI---LFQALVE 128
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSS------------------------ 259
G D Y N+++ + K+ V+ + F ++S
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 260 -FNCDP--DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMK 316
F+ P D+V++ ++ G + ++ A M +KS VVS+ +L GY
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS------VVSWNAMLSGYAQN 242
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCT 376
++AL +F +M+ G++PN T+ +I C + + L ++ +
Sbjct: 243 GFTEDALRLFNDMLRLGVRPNETTWVIVISA-CSFRADPSLTRSLVKLIDEKRVRLNCFV 301
Query: 377 LNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELL 436
L++ H ++ A ++F ++ Q + T++ ++ IGD A +L+D +
Sbjct: 302 KTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 437 KKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILII--- 493
K+ ++ L+A Y NG+ + A F ++ G P ++ +
Sbjct: 359 KRNVV----SWNSLIAGY-------AHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSA 407
Query: 494 -GHCKEGTF----------------EAGYELLVLML---------RRNFDP----DSEIY 523
GH + ++GY L+ M +R FD D Y
Sbjct: 408 CGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSY 467
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL-----AGLLKKG 569
+L G+ + L KM I P T+ S+L AGLLK+G
Sbjct: 468 NTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEG 518
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 157/363 (43%), Gaps = 54/363 (14%)
Query: 105 KALKFFNWLPQMGFTHNDQ-SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
+A K F+ +P+ ND S+ +M+ + ++L AR + + KS + +
Sbjct: 185 EACKLFDMMPE-----NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVS-------W 232
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
N+++ Y + G +++++LF M +GV P+ T+ ++ R ++ +S+ +++
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV-KLID 291
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
V + + L+ K + R F ++ + ++VT+N ++ G R G +
Sbjct: 292 EKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT---QRNLVTWNAMISGYTRIGDMS 348
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKG-LKPNAVTYN 342
+A + M K+ +VVS+ +L+ GY A+ FE+M+D G KP+ VT
Sbjct: 349 SARQLFDTMPKR------NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMI 402
Query: 343 TLIK----------GLCEVQKIDKIKEVLEGA--------LEVGG--------FSP---- 372
+++ G C V I K + L + GG F
Sbjct: 403 SVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
D + NTL G+ E L + KM + ++PD TY+ ++ G + ++++
Sbjct: 463 DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
Query: 433 DEL 435
+
Sbjct: 523 KSI 525
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 148/411 (36%), Gaps = 93/411 (22%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N +I Y + G +E+ KLF M VV++ ++ K A+ FD M
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPE----NDVVSWTVMITGFAKVKDLENARKYFDRMP 225
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
V ++N ++ G+ +N +D R F M P+ T+ ++
Sbjct: 226 EKSVV-----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 283 KTAHNVVKGMVKKSEDLN------------------------------PDVVSYTTLLRG 312
++VK + +K LN ++V++ ++ G
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 313 YCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSP 372
Y ++ A +F+ M K N V++N+LI G + E E ++ G P
Sbjct: 341 YTRIGDMSSARQLFDTMP----KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLY 432
D T+ ++++ C H+ D E + +
Sbjct: 397 DEVTMISVLSA-CG----------------------------------HMADLELGDCIV 421
Query: 433 DELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILI 492
D + K I L D G Y+S+ + G +A+R F ++ +R D SY L
Sbjct: 422 DYIRKNQIKLNDSG-------YRSLIFMYARGGNLWEAKRVFDEMKER---DVVSYNTLF 471
Query: 493 IGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID-----GLLQKGEPLL 538
G LL M +PD Y S++ GLL++G+ +
Sbjct: 472 TAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 175/420 (41%), Gaps = 27/420 (6%)
Query: 161 RFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
++FNS I G ++ + F+SM + + P TF SLL R + S+ +
Sbjct: 12 KYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQ 71
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
+L G + D Y + L+ + K ++ + F++M + D+V + ++ RAG
Sbjct: 72 VLVN-GFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR----ERDVVHWTAMIGCYSRAG 126
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
V A ++V M + + + P V+ +L G I + + + V G +
Sbjct: 127 IVGEACSLVNEM--RFQGIKPGPVTLLEMLSGV---LEITQLQCLHDFAVIYGFDCDIAV 181
Query: 341 YNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
N+++ C+ + K++ + + D + NT+++G+ + GN++E LK+ +M
Sbjct: 182 MNSMLNLYCKCDHVGDAKDLFDQMEQ-----RDMVSWNTMISGYASVGNMSEILKLLYRM 236
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
++PD T+ + + D E L+ +++K G + T L+ Y
Sbjct: 237 RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL----- 291
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
K K E +R L +D + ++I G + G E + ML+ D S
Sbjct: 292 -----KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
E S++ Q G L +L+ T +S++ K G H SLV+
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG--HLDKSLVIF 404
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 180/473 (38%), Gaps = 120/473 (25%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTF------------------------ 198
+ ++I Y RAG+ E+ L M+ G+ P VT
Sbjct: 115 WTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYG 174
Query: 199 --------NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNS----- 245
NS+L + K AK +FD+M D ++N +I G+
Sbjct: 175 FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR-----DMVSWNTMISGYASVGNMSEI 229
Query: 246 ------MVDDGFRFFQK-------MSSFNCD-----------------PDIVTYNTLVDG 275
M DG R Q+ +S CD D+ L+
Sbjct: 230 LKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITM 289
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
+ GK + ++ V++ + N DVV +T ++ G ++AL+VF EM+ G
Sbjct: 290 YLKCGKEEASYRVLETIP------NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
++ +++ ++ D + + G + G++ DT LN+L+ + G+L+++L
Sbjct: 344 LSSEAIASVVASCAQLGSFD-LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLV 402
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI----------LLRDD 445
+FE+M E + +A S +N+ D +A L++E+ K + LL+
Sbjct: 403 IFERMNERDLVSWNAIISGYAQNV----DLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458
Query: 446 GST-------------------PLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT 486
S P ++ K G A+R F + +D
Sbjct: 459 SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI---SWKDVV 515
Query: 487 SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI-----DGLLQKG 534
S+ ILI G+ G + E+ L +P+ I+ +++ +G++Q+G
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQG 568
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 116/565 (20%), Positives = 225/565 (39%), Gaps = 85/565 (15%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+SL+ Y + GL + K+F M+ VV + +++ + G A S+ +EM
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRE----RDVVHWTAMIGCYSRAGIVGEACSLVNEM-R 139
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
G+ P T ++ G + + + F + F+CD I N++++ C+ V
Sbjct: 140 FQGIKPGPVTLLEMLSGVLEITQLQ-CLHDFAVIYGFDCD--IAVMNSMLNLYCKCDHVG 196
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
A ++ M ++ D+VS+ T++ GY N+ E L + M GL+P+ T+
Sbjct: 197 DAKDLFDQMEQR------DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 344 LIK---GLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM 400
+ +C+++ + +L + GF D L+ + G + +V E +
Sbjct: 251 SLSVSGTMCDLE----MGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETI 306
Query: 401 MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQF 460
D ++V++ L +G E+A ++ E+L+ G L + +VA+ + F
Sbjct: 307 ----PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 461 LCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD 519
+ G+ +++ G T D + LI + K G + LV+ R N + D
Sbjct: 363 -----DLGASVHGY--VLRHGYTLDTPALNSLITMYAKCGHLDKS---LVIFERMN-ERD 411
Query: 520 SEIYQSLIDGL--------------------LQKGEPLLAYQTLQKMLKSSIVPTTSTFH 559
+ ++I G +Q+ + LQ + +P H
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 560 SILAGLLKKGYAHESASLVVLL-----LEGKIRQNVTLSTHTVR----LLFSNGLRDKGF 610
I+ + + +LV + LE R ++S V L+ G KG
Sbjct: 472 CIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKG- 530
Query: 611 RIVGLLYDNGYMVDMK-ELIIFLS------------QSRKLLEANKLLLFCLEKHHNIDI 657
I +Y M+ +IFL+ Q K+ ++ + F +E +H
Sbjct: 531 DIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIF-SSMVRDFGVEPNH---- 585
Query: 658 DMCNTVIEGLCKMKKLSEAFGLYYE 682
+ V++ LC+ K++ +AF Y E
Sbjct: 586 EHLACVVDLLCRAKRIEDAFKFYKE 610
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI YG G ++++++ G+ P+ V F ++L G +F M+ +
Sbjct: 520 LIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDF 579
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA-GKVKT 284
GV P+ ++ C+ ++D F+F+++ +F P I ++D CRA GK +
Sbjct: 580 GVEPNHEHLACVVDLLCRAKRIEDAFKFYKE--NFT-RPSIDVLGIILDA-CRANGKTEV 635
Query: 285 AHNVVKGMVKKSEDLNP-DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
+ + M+ +L P D Y L + + D+ + +M GLK
Sbjct: 636 EDIICEDMI----ELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLK 683
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 178/417 (42%), Gaps = 26/417 (6%)
Query: 229 PDTYTFNILIRGFCKNSMVDDG---FRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
P +T N +I + + F++F K S N P++V+YN +++ C G V A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQS--NIVPNVVSYNQIINAHCDEGNVDEA 235
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
V + ++ + P V+Y L +G I +A + EM+ KG ++ YN LI
Sbjct: 236 LEVYRHILANAP-FAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLI 294
Query: 346 KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKV 405
+G ++ DK E + L+ D T M GN EA++ + +++ K
Sbjct: 295 RGYLDLGDFDKAVEFFD-ELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKF 353
Query: 406 QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS-----MFQF 460
+ T +VL+ G + A L++E+L D+ + P + + S M
Sbjct: 354 RMHPPTGNVLLEVFLKFGKKDEAWALFNEML-------DNHAPPNILSVNSDTVGIMVNE 406
Query: 461 LCKNGKTSKAERGFRQLMKRGTQDP-----TSYKILIIGHCKEGTFEAGYELLVLMLRRN 515
K G+ S+A F+++ + T P Y ++ C++G + R+
Sbjct: 407 CFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRS 466
Query: 516 FDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESA 575
D+ ++++ID L+ A + L +M+ ++ + L+K G ESA
Sbjct: 467 LPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESA 526
Query: 576 SLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVG--LLYDNGYMVDMKELII 630
++ + E + + + ++ VR L D+ IVG + ++ G ++E II
Sbjct: 527 EVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFII 583
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 190/440 (43%), Gaps = 27/440 (6%)
Query: 167 IRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYG 226
++S RA + KL P+V T N+++ + + R + + S+F
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 227 VAPDTYTFNILIRGFCKNSMVDDGFRFFQK-MSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
+ P+ ++N +I C VD+ ++ +++ P VTY L G+ +AG++ A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI 345
++++ M+ K + D Y L+RGY + D+A+ F+E+ K + + T +
Sbjct: 272 ASLLREMLSKGQAA--DSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFM 329
Query: 346 KGLCEVQKIDKIKEVLEG--ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEW 403
+ E KE +E +L F T N L+ G +EA +F +M++
Sbjct: 330 EYWFEK---GNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDN 386
Query: 404 KVQP-----DSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVA---AYK 455
P +S T ++V +G+F A + ++ K S P V Y
Sbjct: 387 HAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVT------SKPFVMDYLGYC 440
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLMLRR 514
++ C+ G ++AER F + + R D S++ +I + K + ++L M+
Sbjct: 441 NIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDV 500
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES 574
N ++ + L++ G+ + + L KM + P S + ++ GL G A +
Sbjct: 501 NLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLC-DGDALDQ 559
Query: 575 ASLVVLLLEGKIRQNVTLST 594
A +V + IR NV ++T
Sbjct: 560 AKDIVGEM---IRHNVGVTT 576
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 184/436 (42%), Gaps = 65/436 (14%)
Query: 129 LEILGRARNLNVA----RNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFT 184
++ L RA +L+ A R +FS R + T N++I + RA + ES+ LF
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTC-------NAIIAAMYRAKRYSESISLFQ 204
Query: 185 SM-KSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK 243
K + P+VV++N ++ G + A V+ +L+ AP + T+ L +G +
Sbjct: 205 YFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQ 264
Query: 244 NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG----------KVKTAHNVVKGMV 293
+ D ++M S D YN L+ G G ++K+ V G+V
Sbjct: 265 AGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIV 324
Query: 294 ---------KKSEDLNPDVVSYTTLL----RGYCMKQNI-----------DEALVVFEEM 329
+K D + SY +LL R + N+ DEA +F EM
Sbjct: 325 NATFMEYWFEKGNDKE-AMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEM 383
Query: 330 VDKGLKPNAVTYNTLIKGLC--EVQKIDKIKEVLEGALEVGG------FSPDTCTLNTLM 381
+D PN ++ N+ G+ E K+ + E + +VG F D ++
Sbjct: 384 LDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIV 443
Query: 382 NGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGIL 441
C G L EA + F + + + D+ ++ ++ + A K+ D ++ +
Sbjct: 444 TRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVD--VN 501
Query: 442 LRDDGSTPLVAAYKS-MFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEG 499
LR +VA + + +F L KNGK +++ ++ +R + DP+ Y +++ G C
Sbjct: 502 LR------VVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGD 555
Query: 500 TFEAGYELLVLMLRRN 515
+ +++ M+R N
Sbjct: 556 ALDQAKDIVGEMIRHN 571
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 189/459 (41%), Gaps = 43/459 (9%)
Query: 286 HNVVKGMVKKSE--------------DLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
HN V+ +++ S+ + P V + ++ + E++ +F+
Sbjct: 149 HNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFK 208
Query: 332 KG-LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNL 390
+ + PN V+YN +I C+ +D+ EV L F+P + T L G AG +
Sbjct: 209 QSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRI 268
Query: 391 NEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPL 450
+A + +M+ DS Y+ L+R +GDF++A + +DEL K + DG +
Sbjct: 269 GDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVY--DG---I 323
Query: 451 VAAYKSMFQFLCKNGKTSKAERGFRQLM-KRGTQDPTSYKILIIGHCKEGTFEAGYELLV 509
V A + ++ + G +A +R L+ K+ P + +L+ K G + + L
Sbjct: 324 VNA--TFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFN 381
Query: 510 LMLRRNFDP-----DSEIYQSLIDGLLQKGEPLLAYQTLQ----KMLKSSIVPTTSTFHS 560
ML + P +S+ +++ + GE A T + K+ V + +
Sbjct: 382 EMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCN 441
Query: 561 ILAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNG 620
I+ ++G E+ EG + +++ + R + L+ + + D
Sbjct: 442 IVTRFCEQGMLTEAER---FFAEG-VSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRM 497
Query: 621 YMVDMKELIIF-------LSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKL 673
V+++ + F L ++ KL E+ ++L E+ D + + V+ GLC L
Sbjct: 498 VDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDAL 557
Query: 674 SEAFGLYYELVEKGNHQPLSCLENLRVALEAGGRSKEVE 712
+A + E++ E + E GR +E+E
Sbjct: 558 DQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIE 596
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 132/291 (45%), Gaps = 21/291 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+LIR Y G F ++V+ F +KS + + + ++G A + +L
Sbjct: 290 YNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLL 349
Query: 223 S-TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNT-----LVDGV 276
+ + P T N+L+ F K D+ + F +M + P+I++ N+ +V+
Sbjct: 350 DKKFRMHPP--TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNEC 407
Query: 277 CRAGKVKTAHNVVKGMVKK--SEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL 334
+ G+ A N K + K S+ D + Y ++ +C + + EA F E V + L
Sbjct: 408 FKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSL 467
Query: 335 KPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE-----VGGFSPDTCTLNTLMNGHCNAGN 389
+A ++ +I + ++ID ++L+ ++ V F L+ G
Sbjct: 468 PADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFG--ARVFGELIKN----GK 521
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
L E+ +V KM E + +PD + Y V+VR LC ++A+ + E+++ +
Sbjct: 522 LTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNV 572
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 19/265 (7%)
Query: 197 TFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAP------DTYTFNILIRGFCKNSMVDDG 250
T N LL + LK G+ + A ++F+EML + AP ++ T I++ K +
Sbjct: 359 TGNVLLEVFLKFGKKDEAWALFNEMLDNH--APPNILSVNSDTVGIMVNECFKMGEFSEA 416
Query: 251 FRFFQKMSS-FNCDP---DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
F+K+ S P D + Y +V C G + A V +S L D S+
Sbjct: 417 INTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRS--LPADAPSH 474
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
++ Y + ID+A+ + + MVD L+ V + + E+ K K+ E E +
Sbjct: 475 RAMIDAYLKAERIDDAVKMLDRMVDVNLR---VVADFGARVFGELIKNGKLTESAEVLTK 531
Query: 367 VGGFSP--DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGD 424
+G P D + ++ G C+ L++A + +M+ V + ++ G
Sbjct: 532 MGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGR 591
Query: 425 FERAEKLYDELLKKGILLRDDGSTP 449
E EK+ + + + G+TP
Sbjct: 592 REEIEKILNSVARPVRNAGQSGNTP 616
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 174/403 (43%), Gaps = 40/403 (9%)
Query: 175 LFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTF 234
L +E+V+L K P T+ +L+ + + K V E + T G P +
Sbjct: 69 LLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVH-EHIRTSGFVPGIVIW 123
Query: 235 NILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVK 294
N L+R + K + D + F +M + D+ ++N +V+G G ++ A + M +
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMP----NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 295 KSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD-KGLKPNAVTYNTLIKGLCEVQK 353
K D S+T ++ GY K +EALV++ M +PN T + + V+
Sbjct: 180 K------DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233
Query: 354 IDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYS 413
I + KE+ G + G D ++LM+ + G ++EA +F+K+ V+ D +++
Sbjct: 234 IRRGKEI-HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI----VEKDVVSWT 288
Query: 414 VLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERG 473
++ + L+ EL+ G R P + + C + T + +
Sbjct: 289 SMIDRYFKSSRWREGFSLFSELV--GSCER-----PNEYTFAGVLN-ACADLTTEELGKQ 340
Query: 474 FRQLMKRGTQDPTSY--KILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
M R DP S+ L+ + K G E+ ++ + PD + SLI G
Sbjct: 341 VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK----PDLVSWTSLIGGCA 396
Query: 532 QKGEPLLAYQTLQKMLKSSIVPTTSTFHSIL-----AGLLKKG 569
Q G+P A + +LKS P TF ++L AGL++KG
Sbjct: 397 QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 14/279 (5%)
Query: 159 EDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVF 218
++ ++SL+ YG+ G E+ +F + V VV++ S++ K R S+F
Sbjct: 252 DEVLWSSLMDMYGKCGCIDEARNIFDKI----VEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 219 DEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCR 278
E++ + P+ YTF ++ + + G + M+ DP ++LVD +
Sbjct: 308 SELVGSCE-RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
G +++A +VV G K PD+VS+T+L+ G DEAL F+ ++ G KP+
Sbjct: 367 CGNIESAKHVVDGCPK------PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
VT+ ++ ++K E E S + L++ +G + V
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLK 437
+M ++P ++ ++ G+ + AE+ EL K
Sbjct: 481 EM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK 516
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 183/466 (39%), Gaps = 78/466 (16%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N L+R Y + G ++ K+F M + + ++N ++ + G A+ +FDEM
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMP----NRDLCSWNVMVNGYAEVGLLEEARKLFDEM- 177
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSF-NCDPDIVT------------- 268
D+Y++ ++ G+ K ++ + M N P+I T
Sbjct: 178 ----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233
Query: 269 ----------------------YNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
+++L+D + G + A N+ +V+K DVVS+
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK------DVVSW 287
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
T+++ Y E +F E+V +PN T+ ++ C +++ + + G +
Sbjct: 288 TSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNA-CADLTTEELGKQVHGYMT 346
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
GF P + ++L++ + GN+ A V + +PD +++ L+ G +
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC----PKPDLVSWTSLIGGCAQNGQPD 402
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPT 486
A K +D LLK G+ P + ++ G K F + ++ T
Sbjct: 403 EALKYFDLLLK-------SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 487 S--YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
S Y L+ + G FE +L ++ P ++ S++ G G LA + Q
Sbjct: 456 SDHYTCLVDLLARSGRFE---QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 545 KMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNV 590
++ K I P + +A + E EGK+R+ +
Sbjct: 513 ELFK--IEPENPVTYVTMANIYAAAGKWEE--------EGKMRKRM 548
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 170/436 (38%), Gaps = 84/436 (19%)
Query: 250 GFRFFQKMSSFNC-----------DPDIVTYNTLVDGVCRAGKVKTAHNVVKG--MVKKS 296
GF + +SSF+ +P+ +V+ +CRA + A +V+ G +++++
Sbjct: 14 GFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREA 73
Query: 297 EDL-----NPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV 351
L P +Y L++ + ++E V E + G P V +N L++ +
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME-----W--- 403
+ ++V + + D C+ N ++NG+ G L EA K+F++M E W
Sbjct: 134 GSLVDARKVFDEMP-----NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAM 188
Query: 404 ------KVQPDSA--TYSVLVR------NLCHIG----------DFERAEKLYDELLKKG 439
K QP+ A YS++ R N+ + R ++++ +++ G
Sbjct: 189 VTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG 248
Query: 440 I---------LLRDDGSTPLVAAYKSMFQFLCKN---GKTSKAERGFRQLMKR------- 480
+ L+ G + +++F + + TS +R F+ R
Sbjct: 249 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 308
Query: 481 ----GTQDPTSYKIL-IIGHCKE-GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKG 534
+ P Y ++ C + T E G ++ M R FDP S SL+D + G
Sbjct: 309 ELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCG 368
Query: 535 EPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIRQNVTLST 594
A + K +V T S++ G + G E+ LLL+ + +
Sbjct: 369 NIESAKHVVDGCPKPDLVSWT----SLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFV 424
Query: 595 HTVRLLFSNGLRDKGF 610
+ + GL +KG
Sbjct: 425 NVLSACTHAGLVEKGL 440
>AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11938265-11939653 REVERSE
Length = 462
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 138/304 (45%), Gaps = 7/304 (2%)
Query: 157 KLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKS 216
K+ RFFNS+I Y G F E V++F MK+ V T LL L + + +A+
Sbjct: 136 KVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARD 195
Query: 217 VFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFN-CDPDIVTYNTLVDG 275
F M+ + Y+ +++ C N + ++M +IVT+ +++
Sbjct: 196 FFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGC 255
Query: 276 VCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK 335
+ + V+K M K+S L+ D SY L+ G+ ++EA + M DK L+
Sbjct: 256 CVKRWDFEELDLVLKLMEKESVMLDLD--SYKVLIDGFTSYGKVEEAERLVLMMHDKKLR 313
Query: 336 PNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALK 395
+ YN ++ G ++K+ E L + G +P+ T LMNG C AG + EA+
Sbjct: 314 VESYLYNLIMNGYSRFGLVEKVIE-LYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMS 372
Query: 396 VFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
++ + + D YS L +G +++ ++ E+++ G + G+T
Sbjct: 373 FLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFI---PGATICERLAD 429
Query: 456 SMFQ 459
S+F+
Sbjct: 430 SLFE 433
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 230 DTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVV 289
++Y +N+++ G+ + +V+ + +MSS P+ TY L++G+C+AGKV A + +
Sbjct: 315 ESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFL 374
Query: 290 KGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLC 349
+ + + D Y+TL ID++L V EM+ G P A L L
Sbjct: 375 NEL--RVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLF 432
Query: 350 EVQKIDKIKEVLEGALEVGGFSPDTCT 376
EV + K ++L + G P +C+
Sbjct: 433 EVNR--KEAQMLITIVVKCGIKPKSCS 457
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 20/256 (7%)
Query: 374 TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSA-TYSVLVRNLCHIGDFERAEKLY 432
TCTL+ L C+ L A F M+E + + + +V+V LC G+ RA +L
Sbjct: 176 TCTLHLLNLKRCDQMEL--ARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELV 233
Query: 433 DEL-LKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKI 490
+E+ L KG+ + +KSM K + + + + K D SYK+
Sbjct: 234 EEMGLVKGV-------KANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKV 286
Query: 491 LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSS 550
LI G G E L+++M + +S +Y +++G + G + +M
Sbjct: 287 LIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRG 346
Query: 551 IVPTTSTFHSILAGLLKKGYAHESASLV--VLLLEGKIRQNV--TLSTHTVRLLFSNGLR 606
+ P T+ ++ GL K G E+ S + + + E +I + + TLS R+ G+
Sbjct: 347 VTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRV----GMI 402
Query: 607 DKGFRIVGLLYDNGYM 622
DK +V + +G++
Sbjct: 403 DKSLEVVAEMIRDGFI 418
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 147/359 (40%), Gaps = 53/359 (14%)
Query: 234 FNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMV 293
FN +I + N + F+ M + D T + + R +++ A + MV
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 294 KKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM-VDKGLKPNAVTYNTLIKGLC--- 349
+ D+ V S T ++ C I A + EEM + KG+K N VT+ ++I G C
Sbjct: 202 ESGIDV-VTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKR 259
Query: 350 -EVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPD 408
+ +++D + +++E D + L++G + G + EA ++ M + K++ +
Sbjct: 260 WDFEELDLVLKLMEKE----SVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVE 315
Query: 409 SATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTS 468
S Y++++ G E+ +LY E+ +G+
Sbjct: 316 SYLYNLIMNGYSRFGLVEKVIELYSEMSSRGV---------------------------- 347
Query: 469 KAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID 528
T + +Y +L+ G CK G L + F+ D E+Y +L +
Sbjct: 348 -------------TPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSE 394
Query: 529 GLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEGKIR 587
+ G + + + +M++ +P +T LA L + E+ L+ ++++ I+
Sbjct: 395 ECYRVGMIDKSLEVVAEMIRDGFIP-GATICERLADSLFEVNRKEAQMLITIVVKCGIK 452
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 164/368 (44%), Gaps = 45/368 (12%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLL-----LILLKRGRTNMAKSV 217
+NSLI Y G ++E+++++ +K+ + P T +S+L L+++K+G+
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ------- 227
Query: 218 FDEMLSTYGVA------PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNT 271
+G A N L+ + K D R F +M D V+YNT
Sbjct: 228 -----GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV----RDSVSYNT 278
Query: 272 LVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
++ C K++ V+ ++ + PD+++ +++LR +++ A ++ M+
Sbjct: 279 MI---CGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 332 KGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLN 391
G + N LI + + ++V ++E DT + N++++G+ +G+L
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFN-SMEC----KDTVSWNSIISGYIQSGDLM 390
Query: 392 EALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLV 451
EA+K+F+ MM + Q D TY +L+ + D + + L+ +K GI + S L+
Sbjct: 391 EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLM 511
Y K G+ + + F + GT D ++ +I + G F G ++ M
Sbjct: 451 DMYA-------KCGEVGDSLKIFSSM---GTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 512 LRRNFDPD 519
+ PD
Sbjct: 501 RKSEVVPD 508
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 158/397 (39%), Gaps = 85/397 (21%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+NS+IR++ + GLF E+++ + ++ VSP TF S++ M V++++
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
L D GF + D+ N LVD R G
Sbjct: 133 L-------------------------DMGF-----------ESDLFVGNALVDMYSRMGL 156
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ A V M + D+VS+ +L+ GY +EAL ++ E+ + + P++ T
Sbjct: 157 LTRARQVFDEMPVR------DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTV 210
Query: 342 NTLIKGLCEVQKIDKIKEVLEG------------------ALEVGGFSP----------- 372
++++ + + K + L G A+ + P
Sbjct: 211 SSVLPAFGNLLVV-KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD 269
Query: 373 --DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEK 430
D+ + NT++ G+ + E++++F + ++ + +PD T S ++R H+ D A+
Sbjct: 270 VRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKY 328
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKI 490
+Y+ +LK G +L L+ Y K G A F + +D S+
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYA-------KCGDMITARDVFNSM---ECKDTVSWNS 378
Query: 491 LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLI 527
+I G+ + G +L +M+ D Y LI
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/505 (20%), Positives = 196/505 (38%), Gaps = 109/505 (21%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF 163
S A +N++ + GF +++++ + ++ AR+ S++ K + +
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS-------W 376
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
NS+I Y ++G E++KLF M + +T+ L+ + + K + +
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ G+ D N LI + K V D + F M + D VT+NT++ R G
Sbjct: 437 S-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT----GDTVTWNTVISACVRFGDFA 491
Query: 284 TAHNVVKGMVKKSEDLNPDVVSY--------------------TTLLR-GYCMKQNIDEA 322
T V M +KSE + PD+ ++ LLR GY + I A
Sbjct: 492 TGLQVTTQM-RKSE-VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 323 LV--------------VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
L+ VFE M + + VT+ +I + +K E +E
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRR----DVVTWTGMIYAYGMYGEGEKALETF-ADMEKS 604
Query: 369 GFSPDTCTLNTLMNGHCNAGNLNEALKVFEKM---------------------------- 400
G PD+ ++ ++G ++E L FEKM
Sbjct: 605 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 401 -----MEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK 455
++PD++ ++ ++R GD E AE++ +++ L DD ++A+
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE---LNPDDPGYSILAS-- 719
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIG---HC----------KEGTFE 502
+ + L K K S + + K T++P Y + +G H E ++
Sbjct: 720 NAYAALRKWDKVSLIRKSLKD--KHITKNP-GYSWIEVGKNVHVFSSGDDSAPQSEAIYK 776
Query: 503 AGYELLVLMLRRNFDPDS-EIYQSL 526
+ L LM + + PD E+ Q+L
Sbjct: 777 SLEILYSLMAKEGYIPDPREVSQNL 801
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 198/479 (41%), Gaps = 58/479 (12%)
Query: 124 SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLF 183
SY ++E GR R R + ++G +L R L+ Y G ++ K+F
Sbjct: 18 SYVELIEANGRDRLF--CRGRVLHAHLVTSGIARLT-RIAAKLVTFYVECGKVLDARKVF 74
Query: 184 TSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCK 243
M +S VV + + G + F EM G+ D + L++
Sbjct: 75 DEMPKRDISGCVVMIGACA----RNGYYQESLDFFREMYKD-GLKLDAFIVPSLLKA--S 127
Query: 244 NSMVDDGFRFFQKMSS-----FNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSED 298
+++D R F KM F+ + D ++L+D + G+V A V + ++
Sbjct: 128 RNLLD---REFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ--- 181
Query: 299 LNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIK 358
D+V + ++ GY DEAL + ++M G+KP+ +T+N LI G ++ +K+
Sbjct: 182 ---DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVS 238
Query: 359 EVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRN 418
E+LE + + G+ PD + ++++G + +A F++M+ + P+SAT L+
Sbjct: 239 EILE-LMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Query: 419 LCHIGDFERAEKLYDELLKKGILLRDDG------------------------STP--LVA 452
+ + ++++ + G L D G TP
Sbjct: 298 CTTLAYMKHGKEIHGYSVVTG--LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355
Query: 453 AYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLM 511
+ SM +G KA F Q+ G + D ++ ++ G + G L +LM
Sbjct: 356 TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLM 415
Query: 512 LRR-NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
+ P E Y ++D L + G+ + AY+ ++ M + P + ++LA G
Sbjct: 416 QNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM---RMEPDLFVWGALLAACRNHG 471
>AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24528423-24529988 REVERSE
Length = 521
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 148/362 (40%), Gaps = 50/362 (13%)
Query: 106 ALKFFNWL-PQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
AL F WL F+H D++ ++ GR ++ + K + G +
Sbjct: 126 ALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGG------KTLE 179
Query: 165 SLIRSYGRAGLFQESVKLFTSMKS-VGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
S I RAG ++ F M++ G+ + ++ L ++G ++A+ + +
Sbjct: 180 SAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTAN 239
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVK 283
+ PD ++LI G+C +D+ R +MS + YN ++D VC+ + K
Sbjct: 240 E--IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKK 297
Query: 284 TAHNV------------VKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD 331
+ +G+ + +E N L+ C + +EA+ +F M +
Sbjct: 298 DPFKLQPEVEKVLLEMEFRGVPRNTETFN-------VLINNLCKIRRTEEAMTLFGRMGE 350
Query: 332 KGLKPNAVTYNTLIKGLCEVQKI-------DKIKEVLEGAL----EVGGFSPDTCTLNTL 380
G +P+A TY LI+ L + +I DK+K G L E GF L L
Sbjct: 351 WGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGF------LKIL 404
Query: 381 MNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
C L A+ VF+ M +P TY +L+ +C RA LY E KKGI
Sbjct: 405 ----CGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Query: 441 LL 442
+
Sbjct: 461 AV 462
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 41/276 (14%)
Query: 253 FFQKM-SSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR 311
FF+KM + + D + +V +C G A +VK + ++ PD L+
Sbjct: 197 FFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNT---ANEIFPDENICDLLIS 253
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV-QKID--KIKEVLEGAL--- 365
G+C+ + +DEA + EM G + YN ++ +C++ +K D K++ +E L
Sbjct: 254 GWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEM 313
Query: 366 EVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDF 425
E G +T T N L+N C EA+ +F +M EW QPD+ TY VL+R+L
Sbjct: 314 EFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARI 373
Query: 426 ERAEKL--------YDELLKK----GIL------------------LRDDGSTPLVAAYK 455
+++ Y ELL K G L ++ +G P + Y
Sbjct: 374 GEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYD 433
Query: 456 SMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKI 490
+ +C N + ++A +++ K+G P Y++
Sbjct: 434 LLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 118/288 (40%), Gaps = 13/288 (4%)
Query: 90 KTTGFQVLRLIKV--PSKALKFFNWLPQ-MGFTHNDQSYFLMLEILGRARNLNVARNFLF 146
KT + RL++ P + FF + G + +S L+++ L + ++A +
Sbjct: 176 KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMV- 234
Query: 147 SIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILL 206
+ + + ++ + LI + A E+ +L M G +N +L +
Sbjct: 235 ---KNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVC 291
Query: 207 KRGRTNMAKSVFDEM------LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSF 260
K R + E+ + GV +T TFN+LI CK ++ F +M +
Sbjct: 292 KLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEW 351
Query: 261 NCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNID 320
C PD TY L+ + +A ++ ++ M + Y L+ C + ++
Sbjct: 352 GCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLE 411
Query: 321 EALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
A+ VF+ M G KP TY+ L+ +C ++ + + + A + G
Sbjct: 412 HAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKG 459
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
FN LI + + +E++ LF M G P T+ L+ L + R + D+M
Sbjct: 325 FNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMK 384
Query: 223 ST-YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
S YG + + ++ C ++ F+ M + C P I TY+ L+ +C +
Sbjct: 385 SAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQ 444
Query: 282 VKTAHNVVKGMVKKSEDLNP 301
+ A+ + K KK ++P
Sbjct: 445 LTRANGLYKEAAKKGIAVSP 464
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 204/462 (44%), Gaps = 59/462 (12%)
Query: 101 KVPSKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVAR--NFLFSIKRK---SNGT 155
+VPS +N L + G++ N +F + IL R +AR + F + K +NG
Sbjct: 68 RVPSPGTYLWNHLIK-GYS-NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 156 VK---------LEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSP--SVVTFNSLLLI 204
V+ L F ++ + + LF++ K G P + V++ +L++
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 205 LLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDP 264
+K G AKS+FD M + ++N L+ G K+ + + + F +M
Sbjct: 186 YVKSGELEEAKSMFDLMPER-----NLGSWNALVDGLVKSGDLVNAKKLFDEMPK----R 236
Query: 265 DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALV 324
DI++Y +++DG + G + +A ++ + E DV +++ L+ GY +EA
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFE------EARGVDVRAWSALILGYAQNGQPNEAFK 290
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE--VGGFSPDTCTLNTLMN 382
VF EM K +KP+ L+ C ++ E ++ L + FS + L++
Sbjct: 291 VFSEMCAKNVKPDEFIMVGLMSA-CSQMGCFELCEKVDSYLHQRMNKFSSHY-VVPALID 348
Query: 383 GHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILL 442
+ G+++ A K+FE+M Q D +Y ++ + G A +L+++++
Sbjct: 349 MNAKCGHMDRAAKLFEEM----PQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMV------ 398
Query: 443 RDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFR--QLMKRGTQ---DPTSYKILIIGHCK 497
D+G P A+ + + +C G++ E G R +LM++ P Y ++ +
Sbjct: 399 -DEGIVPDEVAFTVILK-VC--GQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSR 454
Query: 498 EGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLA 539
G + YEL+ M F+ + + SL+ G G +A
Sbjct: 455 TGKLKEAYELIKSM---PFEAHASAWGSLLGGCSLHGNTEIA 493
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 174/423 (41%), Gaps = 39/423 (9%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVS-PSVVTFNSLLLILLKRGRTNMAKSVFDE 220
+N LI+ Y LF E+V + M G++ P TF ++ + G+ + SV
Sbjct: 76 LWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGL 135
Query: 221 MLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
+L G D + + K + + F +M N V++ LV ++G
Sbjct: 136 VLRI-GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNA----VSWTALVVAYVKSG 190
Query: 281 KVKTAHNVVKGMVKKSEDLNPD--VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
+++ A ++ DL P+ + S+ L+ G ++ A +F+EM K +
Sbjct: 191 ELEEAKSMF--------DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMP----KRDI 238
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
++Y ++I G + + +++ E A V D + L+ G+ G NEA KVF
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGV-----DVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+M V+PD L+ +G FE EK+ L ++ + S +V A +
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR---MNKFSSHYVVPA---LI 347
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDP 518
K G +A + F ++ +R D SY ++ G G L M+ P
Sbjct: 348 DMNAKCGHMDRAAKLFEEMPQR---DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVP 404
Query: 519 DSEIYQSLIDGLLQK---GEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESA 575
D + ++ Q E L ++ ++K K SI+ + + I+ L + G E+
Sbjct: 405 DEVAFTVILKVCGQSRLVEEGLRYFELMRK--KYSILASPDHYSCIVNLLSRTGKLKEAY 462
Query: 576 SLV 578
L+
Sbjct: 463 ELI 465
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 142/337 (42%), Gaps = 25/337 (7%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNS 165
A K F+ +P+ SY M++ + ++ AR+ LF R ++ R +++
Sbjct: 226 AKKLFDEMPKRDII----SYTSMIDGYAKGGDMVSARD-LFEEARG------VDVRAWSA 274
Query: 166 LIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTY 225
LI Y + G E+ K+F+ M + V P L+ + G + + V +
Sbjct: 275 LILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRM 334
Query: 226 GVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTA 285
Y LI K +D + F++M D+V+Y ++++G+ G A
Sbjct: 335 NKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQ----RDLVSYCSMMEGMAIHGCGSEA 390
Query: 286 HNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK-GLKPNAVTYNTL 344
+ + MV E + PD V++T +L+ + ++E L FE M K + + Y+ +
Sbjct: 391 IRLFEKMV--DEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCI 448
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+ L K+ + E+++ F +L+ G GN A V + E
Sbjct: 449 VNLLSRTGKLKEAYELIKSM----PFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE-- 502
Query: 405 VQPDSATYSVLVRNLCHIGD-FERAEKLYDELLKKGI 440
++P SA VL+ N+ D + L D++ + GI
Sbjct: 503 LEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGI 539
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 223/520 (42%), Gaps = 56/520 (10%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+ +L+ Y + L +E+++LFTSM G+ P + +S+L V +
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAG-- 280
+ D+Y N LI + K + D + F ++ D+V +N +++G R G
Sbjct: 378 KA-NLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA----ADVVLFNAMIEGYSRLGTQ 432
Query: 281 -KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAV 339
++ A N+ + M + + P ++++ +LLR ++ + + M GL +
Sbjct: 433 WELHEALNIFRDM--RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 340 TYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEK 399
+ LI + + V + ++V D N++ G+ EAL +F +
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFD-EMKV----KDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 400 MMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI---------LLR------- 443
+ + +PD T++ +V ++ + ++ + +LLK+G+ LL
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 444 --------DDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGH 495
D ++ V + S+ +G+ KA + ++M G + + ++
Sbjct: 606 PEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSA 665
Query: 496 CKE-GTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPT 554
C G E G + LMLR +P++E Y ++ L + G A + ++KM P
Sbjct: 666 CSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK---PA 722
Query: 555 TSTFHSILAGLLKKGYAH--ESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG--- 609
+ S+L+G K G E A+ + +L + K + T+ ++ + S G+ +
Sbjct: 723 AIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN---IYASKGMWTEAKKV 779
Query: 610 ---FRIVGLLYDNG--YMVDMKELIIFLSQSRKLLEANKL 644
++ G++ + G ++ KE+ IFLS+ + +AN++
Sbjct: 780 RERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQI 819
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 167/427 (39%), Gaps = 69/427 (16%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRF 253
S VT+ +++ +K GR+ ++ +F +++ V PD Y + ++ ++ G +
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMED-NVVPDGYILSTVLSACSILPFLEGGKQI 271
Query: 254 FQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY 313
+ + + D N L+D + G+V AH + GM N +++S+TTLL GY
Sbjct: 272 HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP------NKNIISWTTLLSGY 325
Query: 314 CMKQNI--DEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID--------KIK----- 358
KQN EA+ +F M GLKP+ ++++ + + IK
Sbjct: 326 --KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 359 ---------------EVLEGALEVGGF--SPDTCTLNTLMNGHCNAGN---LNEALKVFE 398
+ L A +V + D N ++ G+ G L+EAL +F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYK--- 455
M ++P T+ L+R + +++++ + K G+ L + L+ Y
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 456 ---------------------SMFQFLCKNGKTSKAERGFRQL-MKRGTQDPTSYKILII 493
SMF + + +A F +L + R D ++ ++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 494 GHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVP 553
+ + G E +L+R + + I +L+D + G P A++ +V
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 554 TTSTFHS 560
S S
Sbjct: 624 WNSVISS 630
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 178/411 (43%), Gaps = 33/411 (8%)
Query: 159 EDRF-FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSV 217
ED F +N +I Y R ++ES++L M+ VSP+ VT +L K ++ K V
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 218 FDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVC 277
E +S P N L+ + +D R F+ M + D++++ ++V G
Sbjct: 259 -HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA----RDVISWTSIVKGYV 313
Query: 278 RAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPN 337
G +K A M + D +S+T ++ GY +E+L +F EM G+ P+
Sbjct: 314 ERGNLKLARTYFDQMPVR------DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 338 AVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVF 397
T +++ + ++ I E ++ ++ D N L++ + G +A KVF
Sbjct: 368 EFTMVSVLTACAHLGSLE-IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 398 EKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSM 457
M Q D T++ +V L + G + A K++ + ++D P Y +
Sbjct: 427 HDM----DQRDKFTWTAMVVGLANNGQGQEAIKVFFQ-------MQDMSIQPDDITYLGV 475
Query: 458 FQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRRN 515
+G +A + F ++ +P+ Y ++ + G + YE+L M
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM---P 532
Query: 516 FDPDSEIYQSLIDG-LLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
+P+S ++ +L+ L EP +A +K+L+ + P +++L +
Sbjct: 533 MNPNSIVWGALLGASRLHNDEP-MAELAAKKILE--LEPDNGAVYALLCNI 580
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 152/370 (41%), Gaps = 32/370 (8%)
Query: 190 GVSPSVVTFNSLLLILLKR--GRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV 247
GV+P+ L + R G + A +F ++ PD +N +I+G+ K
Sbjct: 61 GVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPE-----PDVVVWNNMIKGWSKVDCD 115
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
+G R + M PD T+ L++G+ R G + V K L ++
Sbjct: 116 GEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF-GLGSNLYVQN 174
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEV 367
L++ Y + +D A VF D+ K + ++N +I G +++ ++ E+L +E
Sbjct: 175 ALVKMYSLCGLMDMARGVF----DRRCKEDVFSWNLMISGYNRMKEYEESIELLV-EMER 229
Query: 368 GGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFER 427
SP + TL +++ + + +V E + E K +P + LV G+ +
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 428 AEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTS 487
A +++ + + RD V ++ S+ + + G A F Q+ R D S
Sbjct: 290 AVRIF-----RSMKARD------VISWTSIVKGYVERGNLKLARTYFDQMPVR---DRIS 335
Query: 488 YKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLID-----GLLQKGEPLLAYQT 542
+ I+I G+ + G F E+ M PD S++ G L+ GE + Y
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 543 LQKMLKSSIV 552
K+ +V
Sbjct: 396 KNKIKNDVVV 405
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 119/308 (38%), Gaps = 88/308 (28%)
Query: 137 NLNVARNFLFSIKRKSNGTVKLEDRF-FNSLIRSYGRAGLFQESVKLFTSMKSVGVSP-- 193
NL +AR + + + DR + +I Y RAG F ES+++F M+S G+ P
Sbjct: 317 NLKLARTYF--------DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
Query: 194 ---------------------------------SVVTFNSLLLILLKRGRTNMAKSVFDE 220
VV N+L+ + K G + A+ VF +
Sbjct: 369 FTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD 428
Query: 221 M------------------------------LSTYGVAPDTYTFNILIRGFCKNSMVDDG 250
M + + PD T+ ++ + MVD
Sbjct: 429 MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA 488
Query: 251 FRFFQKM-SSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTL 309
+FF KM S +P +V Y +VD + RAG VK A+ +++ M +NP+ + + L
Sbjct: 489 RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM-----PMNPNSIVWGAL 543
Query: 310 LRGYCMKQNIDEALVVFEEMVDKGLKP-NAVTYNTLIKGLCEVQKIDKIKEVLEGALEVG 368
L + + A + +++++ L+P N Y L ++ ++EV ++V
Sbjct: 544 LGASRLHNDEPMAELAAKKILE--LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVA 601
Query: 369 -----GFS 371
GFS
Sbjct: 602 IKKTPGFS 609
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 165/401 (41%), Gaps = 46/401 (11%)
Query: 224 TYGVAPDTYTFNILIRGFCK--NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGV----C 277
T GVAP+ L +C V ++ F K+ +PD+V +N ++ G C
Sbjct: 59 TRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP----EPDVVVWNNMIKGWSKVDC 114
Query: 278 RAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM----VDKG 333
V+ N++K E + PD ++ LL G +K++ AL +++ V G
Sbjct: 115 DGEGVRLYLNMLK------EGVTPDSHTFPFLLNG--LKRD-GGALACGKKLHCHVVKFG 165
Query: 334 LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
L N N L+K +D + V + + D + N +++G+ E+
Sbjct: 166 LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK-----EDVFSWNLMISGYNRMKEYEES 220
Query: 394 LKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL--LKKGILLRDDGSTPLV 451
+++ +M V P S T +++ + D + +++++ + K LR + + LV
Sbjct: 221 IELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENA--LV 278
Query: 452 AAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLM 511
AY + G+ A R FR + R D S+ ++ G+ + G + M
Sbjct: 279 NAYAAC-------GEMDIAVRIFRSMKAR---DVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
R D + +IDG L+ G + + ++M + ++P T S+L G
Sbjct: 329 PVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 572 HESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRI 612
+ + + KI+ +V + + + F G +K ++
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 152/354 (42%), Gaps = 25/354 (7%)
Query: 226 GVAPDTYTFNILIRGFCKNSMVD-DGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKT 284
GV P +TF L++ K + D + F+F + F D D N+L+ G +G
Sbjct: 99 GVIPSRHTFPPLLKAVFK--LRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDF 156
Query: 285 AHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTL 344
A + G +ED DVV++T ++ G+ + EA+V F EM G+ N +T ++
Sbjct: 157 ASRLFDG----AED--KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 345 IKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWK 404
+K +V+ + + V LE G D ++L++ + ++A KVF++M
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 405 VQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKN 464
V +A + V++ C F++ +++E+LK + P S+
Sbjct: 271 VVTWTALIAGYVQSRC----FDKGMLVFEEMLKSDV-------APNEKTLSSVLSACAHV 319
Query: 465 GKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIY 523
G + R ++K + + T+ LI + K G E +L+ R + + +
Sbjct: 320 GALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA----ILVFERLHEKNVYTW 375
Query: 524 QSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASL 577
++I+G G A+ ML S + P TF ++L+ G E L
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 176/411 (42%), Gaps = 43/411 (10%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
NSLI Y +GLF + +LF + VVT+ +++ ++ G + A F EM
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAE----DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKK 197
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVDDG---FRFFQKMSSFNCDPDIVTYNTLVDGVCRAG 280
T GVA + T +++ K V G + + C D+ ++LVD +
Sbjct: 198 T-GVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC--DVFIGSSLVDMYGKCS 254
Query: 281 KVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVT 340
A V M + +VV++T L+ GY + D+ ++VFEEM+ + PN T
Sbjct: 255 CYDDAQKVFDEMPSR------NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 341 YNTLIKGLCEVQKIDKIKEV----LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKV 396
++++ V + + + V ++ ++E+ +T TL++ + G L EA+ V
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEI-----NTTAGTTLIDLYVKCGCLEEAILV 363
Query: 397 FEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
FE++ E V T++ ++ G A L+ +L + +P + +
Sbjct: 364 FERLHEKNVY----TWTAMINGFAAHGYARDAFDLFYTMLSSHV-------SPNEVTFMA 412
Query: 457 MFQFLCKNGKTSKAERGFRQLMKRGTQDPTS--YKILIIGHCKEGTFEAGYELLVLMLRR 514
+ G + R F + R +P + Y ++ ++G E E L+ R
Sbjct: 413 VLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLE---EAKALIERM 469
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
+P + ++ +L L + L +++K + P+ S +++LA L
Sbjct: 470 PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIK--LQPSHSGRYTLLANL 518
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 139/325 (42%), Gaps = 20/325 (6%)
Query: 104 SKALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNF--LFSIKRKSNGTVKLEDR 161
S+A+ +F + + G N+ + +L+ G+ ++ R+ L+ G VK +
Sbjct: 186 SEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY----LETGRVKCDVF 241
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
+SL+ YG+ + ++ K+F M S +VVT+ +L+ ++ + VF+EM
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMP----SRNVVTWTALIAGYVQSRCFDKGMLVFEEM 297
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
L + VAP+ T + ++ + G R M + + + TL+D + G
Sbjct: 298 LKS-DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
++ A V + + +K +V ++T ++ G+ +A +F M+ + PN VT+
Sbjct: 357 LEEAILVFERLHEK------NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTF 410
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
++ +++ + + P +++ G L EA + E+M
Sbjct: 411 MAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM- 469
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFE 426
++P + + L + D+E
Sbjct: 470 --PMEPTNVVWGALFGSCLLHKDYE 492
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 214/487 (43%), Gaps = 65/487 (13%)
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
+TN+A VF+++ P+ + N LIR +NS F F +M F D TY
Sbjct: 66 QTNLAVRVFNQVQE-----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTY 120
Query: 270 NTLV---DGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY--CMKQNIDEALV 324
L+ G VK HN ++ + L+ D+ L+ Y C + +A+
Sbjct: 121 PFLLKACSGQSWLPVVKMMHNHIEKL-----GLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 325 VFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGH 384
+FE+M ++ + V++N+++ GL + ++ + + + + D + NT+++G+
Sbjct: 176 LFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR-----DLISWNTMLDGY 226
Query: 385 CNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDE--LLKKGILL 442
+++A ++FEKM E ++ ++S +V GD E A ++D+ L K ++
Sbjct: 227 ARCREMSKAFELFEKMPE----RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT 282
Query: 443 RDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKE-GTF 501
T ++A Y + G +A+R Q++ G + + I I+ C E G
Sbjct: 283 W----TIIIAGY-------AEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLL 331
Query: 502 EAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSI 561
G + ++ R N ++ + +L+D + G A+ + K +V +++++
Sbjct: 332 SLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SWNTM 387
Query: 562 LAGLLKKGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKG----------FR 611
L GL G+ E+ L + IR + + GL D+G +
Sbjct: 388 LHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD 447
Query: 612 IVGLLYDNGYMVDMKELIIFLSQSRKL-----LEANKLLLFCLE---KHHNIDIDMCNTV 663
+V + G +VD+ + L ++ K+ +E N ++ L + HN ++D+ V
Sbjct: 448 LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHN-EVDIAKEV 506
Query: 664 IEGLCKM 670
++ L K+
Sbjct: 507 LDNLVKL 513
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 84/368 (22%)
Query: 105 KALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN 164
KA +WLP + HN +E LG + ++ V N
Sbjct: 125 KACSGQSWLPVVKMMHNH------IEKLGLSSDIYVP----------------------N 156
Query: 165 SLIRSYGRAGLF--QESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+LI Y R G ++++KLF M V++NS+L L+K G A+ +FDEM
Sbjct: 157 ALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMP 212
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
D ++N ++ G+ + + F F+KM N V+++T+V G +AG +
Sbjct: 213 QR-----DLISWNTMLDGYARCREMSKAFELFEKMPERN----TVSWSTMVMGYSKAGDM 263
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ A + M +++ VV++T ++ GY K + EA + ++MV GLK +A
Sbjct: 264 EMARVMFDKMPLPAKN----VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 343 TLIKGLCE---------VQKIDKIKEV-------------------LEGALEVGGFSP-- 372
+++ E + I K + L+ A +V P
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 373 DTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG-------DF 425
D + NT+++G G+ EA+++F +M ++PD T+ ++ + H G F
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 426 ERAEKLYD 433
EK+YD
Sbjct: 440 YSMEKVYD 447
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+N+++ G G +E+++LF+ M+ G+ P VTF ++L G + F M
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME 443
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA-GK 281
Y + P + L+ + + + + Q M +P++V + L+ G CR +
Sbjct: 444 KVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP---MEPNVVIWGALL-GACRMHNE 499
Query: 282 VKTAHNVVKGMVKKSEDLNP-DVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGL-KPNAV 339
V A V+ +VK L+P D +Y+ L Y ++ + + +M G+ KP+
Sbjct: 500 VDIAKEVLDNLVK----LDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGA 555
Query: 340 TYNTLIKGLCEVQKIDK 356
+ L G+ E DK
Sbjct: 556 SSVELEDGIHEFTVFDK 572
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 190/428 (44%), Gaps = 40/428 (9%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
++SL+++ A F ES++ G + T +L+ GR A+ VFDEM
Sbjct: 129 YSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT--TLIDFYSATGRIREARKVFDEMP 186
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
D + ++ + + +D +MS + + T N L++G G +
Sbjct: 187 ER-----DDIAWTTMVSAYRRVLDMDSANSLANQMS----EKNEATSNCLINGYMGLGNL 237
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
+ A ++ M K D++S+TT+++GY + EA+ VF +M+++G+ P+ VT +
Sbjct: 238 EQAESLFNQMPVK------DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMS 291
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME 402
T+I + ++ KEV L+ GF D + L++ + G+L AL VF +
Sbjct: 292 TVISACAHLGVLEIGKEVHMYTLQ-NGFVLDVYIGSALVDMYSKCGSLERALLVFFNL-- 348
Query: 403 WKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLC 462
+ + ++ ++ L G + A K++ ++ + + P + S+F
Sbjct: 349 --PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESV-------KPNAVTFVSVFTACT 399
Query: 463 KNGKTSKAERGFRQLMKRGT--QDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDS 520
G + R +R ++ + + Y ++ K G YE L L+ F+P++
Sbjct: 400 HAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLI---YEALELIGNMEFEPNA 456
Query: 521 EIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVL 580
I+ +L+DG ++A K++ + P S ++ +L + YA ++ V
Sbjct: 457 VIWGALLDGCRIHKNLVIAEIAFNKLM--VLEPMNSGYYFLLVSM----YAEQNRWRDVA 510
Query: 581 LLEGKIRQ 588
+ G++R+
Sbjct: 511 EIRGRMRE 518
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 157/382 (41%), Gaps = 60/382 (15%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P+V Y L +G+ + +L ++ M+ + P++ TY++L+K + E
Sbjct: 89 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA---SSFASRFGES 145
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMME-----WKV---------- 405
L+ + GF TL++ + G + EA KVF++M E W
Sbjct: 146 LQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLD 205
Query: 406 ------------QPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAA 453
+ + AT + L+ +G+ E+AE L++++ K I+ +
Sbjct: 206 MDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDII-----------S 254
Query: 454 YKSMFQFLCKNGKTSKAERGFRQLMKRG-TQDPTSYKILIIGHCKEGTFEAGYELLVLML 512
+ +M + +N + +A F ++M+ G D + +I G E G E+ + L
Sbjct: 255 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 314
Query: 513 RRNFDPDSEIYQSLID-----GLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLK 567
+ F D I +L+D G L++ LL + L K ++SI+ GL
Sbjct: 315 QNGFVLDVYIGSALVDMYSKCGSLERA--LLVFFNLPK-------KNLFCWNSIIEGLAA 365
Query: 568 KGYAHESASLVVLLLEGKIRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE 627
G+A E+ + + ++ N GL D+G RI + D+ +V E
Sbjct: 366 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 425
Query: 628 ----LIIFLSQSRKLLEANKLL 645
++ S++ + EA +L+
Sbjct: 426 HYGGMVHLFSKAGLIYEALELI 447
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 155/439 (35%), Gaps = 99/439 (22%)
Query: 210 RTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTY 269
R ++A S +M P+ + +N L +GF S + +M + P TY
Sbjct: 75 RLDLAVSTMTQMQE-----PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTY 129
Query: 270 N---------------------------------TLVDGVCRAGKVKTAHNVVKGMVKKS 296
+ TL+D G+++ A V M ++
Sbjct: 130 SSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER- 188
Query: 297 EDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDK 356
D +++TT++ Y ++D A + +M +K N T N LI G + +++
Sbjct: 189 -----DDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQ 239
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
E L + V D + T++ G+ EA+ VF KMME + PD T S ++
Sbjct: 240 -AESLFNQMPV----KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 294
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
H+G E ++++ L+ G +L + LV Y K G +A F
Sbjct: 295 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYS-------KCGSLERALLVFFN 347
Query: 477 LMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEP 536
L K+ C + S+I+GL G
Sbjct: 348 LPKKNL------------FC--------------------------WNSIIEGLAAHGFA 369
Query: 537 LLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHESASLVVLLLEG-KIRQNVTLSTH 595
A + KM S+ P TF S+ G E + +++ I NV
Sbjct: 370 QEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG 429
Query: 596 TVRLLFSNGLRDKGFRIVG 614
V L GL + ++G
Sbjct: 430 MVHLFSKAGLIYEALELIG 448
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 5/279 (1%)
Query: 162 FFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM 221
F ++R Y + L + L+ ++ G+ + +N ++ + + F+EM
Sbjct: 631 LFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEM 690
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
+ YG P+T TFN+L+ + K + F ++ + D+++YNT++ +
Sbjct: 691 IR-YGFTPNTVTFNVLLDVYGKAKLFKKVNELFL-LAKRHGVVDVISYNTIIAAYGKNKD 748
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
+ +K M + + + + +Y TLL Y + +++ + + M P+ TY
Sbjct: 749 YTNMSSAIKNM--QFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
N +I E ID++ +VL+ L+ G PD C+ NTL+ + G + EA+ + ++M
Sbjct: 807 NIMINIYGEQGWIDEVADVLK-ELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 402 EWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
+ PD TY+ LV L +F A K + + GI
Sbjct: 866 GRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 145/335 (43%), Gaps = 43/335 (12%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+++I Y G F E+ KL+ ++KS GV + F+ ++ + +K G A SV + M
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Query: 224 TYGVAPDTYTFNILIRGFCKNSMVD-----------DGFRFFQKMSSFNC---------- 262
+ PD Y F ++R + K + D G + Q+M +NC
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEM--YNCVINCCARALP 679
Query: 263 ----------------DPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
P+ VT+N L+D +A K + + ++ K + DV+SY
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGV-VDVISY 736
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
T++ Y ++ + M G + YNTL+ + ++++K + +L+ ++
Sbjct: 737 NTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK-RMK 795
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
PD T N ++N + G ++E V +++ E + PD +Y+ L++ G E
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFL 461
A L E+ + I+ T LV A + +FL
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFL 890
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/497 (19%), Positives = 199/497 (40%), Gaps = 88/497 (17%)
Query: 104 SKALKFFNWLPQMG-FTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRF 162
+ A+KFF+W+ G N +Y L+L +LGR + A + + ++ G + + +
Sbjct: 155 TNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLI----KELCGFHEFQKSY 210
Query: 163 --FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDE 220
FN++I + + G + + K F M GV P+V T L+ + K A+ F
Sbjct: 211 QVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSH 270
Query: 221 ML-------STYGVAPDTYT--------------------------FNILIRGFCKNSMV 247
M S Y YT + +++ + + +
Sbjct: 271 MRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM 330
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYT 307
+ M + P+I+ YNTL+ G + K++ A + + L PD SY
Sbjct: 331 ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG--LEPDETSYR 388
Query: 308 TLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLI---------------------- 345
+++ G+ N +EA ++E+ G KPN+ TLI
Sbjct: 389 SMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGI 448
Query: 346 ------------KGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEA 393
+ +V KID + VL+G+ + + ++L+ + G +++
Sbjct: 449 GCQYSSILGIILQAYEKVGKIDVVPCVLKGSFH-NHIRLNQTSFSSLVMAYVKHGMVDDC 507
Query: 394 LKVFEKMMEWKVQP-DSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVA 452
L + + +W+ +S Y +L+ + G A K+Y+ ++ + ++ ++
Sbjct: 508 LGLLRE-KKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMID 566
Query: 453 AYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLM 511
Y M +F S+AE+ + L G D + I++ + K G+ E +L +M
Sbjct: 567 IYTVMGEF-------SEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Query: 512 -LRRNFDPDSEIYQSLI 527
+++ PD +++ ++
Sbjct: 620 DEQKDIVPDVYLFRDML 636
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 110 FNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRS 169
F + + GFT N ++ ++L++ G+A+ KR +G V + +N++I +
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKR--HGVVDVIS--YNTIIAA 742
Query: 170 YGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEM-LSTYGVA 228
YG+ + +M+ G S S+ +N+LL K + +S+ M ST G
Sbjct: 743 YGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG-- 800
Query: 229 PDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNV 288
PD YT+NI+I + + +D+ +++ PD+ +YNTL+ G V+ A +
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL 860
Query: 289 VKGMVKKSEDLNPDVVSYTTLL 310
VK M + ++ PD V+YT L+
Sbjct: 861 VKEM--RGRNIIPDKVTYTNLV 880
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 102/531 (19%), Positives = 214/531 (40%), Gaps = 86/531 (16%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFN- 164
A F+ L +G ++ SY M+E GRA N A+++ +KR + FN
Sbjct: 368 AQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKR-----CGYKPNSFNL 422
Query: 165 -SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILL----KRGRTNMAKSVFD 219
+LI + G ++K M +G ++S+L I+L K G+ ++ V
Sbjct: 423 FTLINLQAKYGDRDGAIKTIEDMTGIGCQ-----YSSILGIILQAYEKVGKIDVVPCVLK 477
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRA 279
+ + + +F+ L+ + K+ MVDD ++ + + Y+ L+ +
Sbjct: 478 GSFHNH-IRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKES 536
Query: 280 GKVKTAHNVVKGMVKKSEDLNP---------------------------------DVVSY 306
G++ A + ++ E++N D + +
Sbjct: 537 GQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGF 596
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVD-KGLKPNAVTYNTLIKGL--CEVQKIDKIKEVLEG 363
+ ++R Y +++EA V E M + K + P+ + +++ C++Q DK++ L
Sbjct: 597 SIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQ--DKLQH-LYY 653
Query: 364 ALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIG 423
+ G + N ++N A L+E FE+M+ + P++ T++VL+
Sbjct: 654 RIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAK 713
Query: 424 DFERAEKLYDELLKKGIL---------------------------LRDDGSTPLVAAYKS 456
F++ +L+ + G++ ++ DG + + AY +
Sbjct: 714 LFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNT 773
Query: 457 MFQFLCKNGKTSKAERGFRQLMKRGTQDPT--SYKILIIGHCKEGTFEAGYELLVLMLRR 514
+ K+ + K R + MK+ T P +Y I+I + ++G + ++L +
Sbjct: 774 LLDAYGKDKQMEKF-RSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKES 832
Query: 515 NFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGL 565
PD Y +LI G A +++M +I+P T+ +++ L
Sbjct: 833 GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 18/249 (7%)
Query: 322 ALVVFEEMVDKG-LKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTL 380
A+ F+ M G L N V Y+ +++ L ++ D+ +++++ F NT+
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 381 MNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGI 440
+ GN+ A K F M+E+ V+P+ AT +L+ + E AE + + K GI
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 441 LLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYK-----ILIIGH 495
+ +AY SM + KAE LMK QD K +++ +
Sbjct: 277 VCE--------SAYSSMITIYTRLRLYDKAEEVI-DLMK---QDRVRLKLENWLVMLNAY 324
Query: 496 CKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTT 555
++G E +LV M F P+ Y +LI G + + A ++ + P
Sbjct: 325 SQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
Query: 556 STFHSILAG 564
+++ S++ G
Sbjct: 385 TSYRSMIEG 393
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 174/426 (40%), Gaps = 50/426 (11%)
Query: 302 DVVSYTTLLRGYCMKQNIDEALVVFEEMVD-KGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
+ V+Y+ +LR ++ D A + +E+ + + +NT+I + + +
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
LE G P+ T+ LM + N+ EA F M ++ + +SA YS ++
Sbjct: 233 FHMMLEFG-VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMITIYT 290
Query: 421 HIGDFERAEKLYDEL--------------------------LKKGIL--LRDDGSTPLVA 452
+ +++AE++ D + L + IL + G +P +
Sbjct: 291 RLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNII 350
Query: 453 AYKSMFQFLCKNGKTSKAERGFRQLMKRGTQ-DPTSYKILIIGHCKEGTFEAGYELLVLM 511
AY ++ K K A+ F +L G + D TSY+ +I G + +E +
Sbjct: 351 AYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL 410
Query: 512 LRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYA 571
R + P+S +LI+ + G+ A +T++ M + SIL +L+
Sbjct: 411 KRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM-----TGIGCQYSSILGIILQAYEK 465
Query: 572 HESASLVVLLLEGK----IRQNVTLSTHTVRLLFSNGLRDKGFRIVGLLYDNGYMVDMKE 627
+V +L+G IR N T + V +G+ D +GLL + + E
Sbjct: 466 VGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDD---CLGLLREKKWRDSAFE 522
Query: 628 ------LIIFLSQSRKLLEANKLLLFCLEKHHNIDIDMCNTVIEGLCKMKKLSEAFGLYY 681
LI +S +L +A K+ +E I++ + +T+I+ M + SEA LY
Sbjct: 523 SHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYL 582
Query: 682 ELVEKG 687
L G
Sbjct: 583 NLKSSG 588
>AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17160224-17162221 REVERSE
Length = 665
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 14/270 (5%)
Query: 194 SVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYT-------FNILIRGFCKNSM 246
S+ N L+ ++ K + A +++++L G P+ + FNIL+ K +
Sbjct: 380 SLSVCNHLIWLMGKAKKWWAALEIYEDLLDE-GPEPNNLSYELVVSHFNILLSAASKRGI 438
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
G R KM P +N ++ +A + A + K MV E P V+SY
Sbjct: 439 WRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGE--KPTVISY 496
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
LL + DEA V+ M+ G++PN Y T+ L QK + + +L+ +
Sbjct: 497 GALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLK-EMA 555
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
G P T N +++G G A + F +M V+P+ TY +L+ L +
Sbjct: 556 SKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPR 615
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKS 456
A +L+ + +G+ L S P A KS
Sbjct: 616 LAYELHVKAQNEGLKL---SSKPYDAVVKS 642
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/507 (19%), Positives = 197/507 (38%), Gaps = 80/507 (15%)
Query: 123 QSYFLMLEILGRARNLNVARNFLFSIKRK---SNGTVKLEDRFFNSLIRSYGRAGLFQES 179
Q + M++ G+ + L A + +KRK S G + +NSL+ G F E+
Sbjct: 147 QVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLL---GAMRGFGEA 203
Query: 180 VKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPD--TYTFNIL 237
K+ M+ G+ P++VT+N+L++I ++ G A + D + G P+ TY+ +L
Sbjct: 204 EKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILD-LTKEKGFEPNPITYSTALL 262
Query: 238 ---------------------------------------------IRGFCKNSM-----V 247
I C M
Sbjct: 263 VYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVK 322
Query: 248 DDGF-----RFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPD 302
DD + + M S P + L+ R + K + ++ +++
Sbjct: 323 DDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLS 382
Query: 303 VVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIK------GLCEVQKIDK 356
V ++ L G K AL ++E+++D+G +PN ++Y ++ + I +
Sbjct: 383 VCNHLIWLMGKAKKWWA--ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWR 440
Query: 357 IKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLV 416
L +E G P N ++ A A+++F+ M++ +P +Y L+
Sbjct: 441 WGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALL 500
Query: 417 RNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQ 476
L ++ A ++++ ++K GI P + AY +M L K + + ++
Sbjct: 501 SALEKGKLYDEAFRVWNHMIKVGI-------EPNLYAYTTMASVLTGQQKFNLLDTLLKE 553
Query: 477 LMKRGTQDPT-SYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGE 535
+ +G + ++ +I G + G YE M N +P+ Y+ LI+ L +
Sbjct: 554 MASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAK 613
Query: 536 PLLAYQTLQKMLKSSIVPTTSTFHSIL 562
P LAY+ K + ++ + +++
Sbjct: 614 PRLAYELHVKAQNEGLKLSSKPYDAVV 640
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 164/430 (38%), Gaps = 120/430 (27%)
Query: 137 NLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVV 196
NL+ AR+ SI S +NS+IR Y + +++ + M G SP
Sbjct: 56 NLSYARSVFESIDCPSV-------YIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYF 108
Query: 197 TF-----------------------------------NSLLLILLKRGRTNMAKSVFDEM 221
TF LL + + G N VF+++
Sbjct: 109 TFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 222 LSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSS--------------FNC----D 263
VA + LI GF N+ D F++M S C D
Sbjct: 169 PQWNVVA-----WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFD 223
Query: 264 P--------DIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCM 315
P +++ +L+D + G ++TA + GM +++ +VS+ +++ GY
Sbjct: 224 PYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERT------LVSWNSIITGYSQ 277
Query: 316 KQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTC 375
+ +EAL +F +M+D G+ P+ VT+ ++I+ +Q ++ + + + GF D
Sbjct: 278 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA-SMIQGCSQLGQSIHAYVSKTGFVKDAA 336
Query: 376 TLNTLMN-------------------------------GHCNAGNLNEALKVFEKMME-W 403
+ L+N G + G+ NEAL +F++M E
Sbjct: 337 IVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 396
Query: 404 KVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRD-DGSTPLVAAYKSMFQFLC 462
PD TY ++ HIG E ++ + E +RD G P V Y M L
Sbjct: 397 NATPDGITYLGVLYACSHIGLVEEGQRYFAE-------MRDLHGLEPTVEHYGCMVDILS 449
Query: 463 KNGKTSKAER 472
+ G+ +AER
Sbjct: 450 RAGRFEEAER 459
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 112/276 (40%), Gaps = 32/276 (11%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEV 360
P V + +++RGY N D+AL+ ++EM+ KG P+ T+ ++K ++ I +
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDI-QFGSC 128
Query: 361 LEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLC 420
+ G + GF + L++ + G +N L+VFE + +W V + S V N
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN-- 186
Query: 421 HIGDFERAEKLYDELLKKGILLRDDGSTPLVAA-------------------YKSMFQFL 461
F A + + E+ G+ + L+ A S+
Sbjct: 187 --NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGFNVILATSLIDMY 244
Query: 462 CKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPD-- 519
K G A F + +R S+ +I G+ + G E + + ML PD
Sbjct: 245 AKCGDLRTARYLFDGMPERTL---VSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKV 301
Query: 520 ---SEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIV 552
S I S+I G Q G+ + AY + +K + +
Sbjct: 302 TFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 337
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 168/429 (39%), Gaps = 91/429 (21%)
Query: 214 AKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLV 273
A+SVF+ + P Y +N +IRG+ + D F+Q+M PD T+ ++
Sbjct: 60 ARSVFESI-----DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVL 114
Query: 274 D----------GVCRAG-KVKTAHNV-----------------VKGMVKKSEDL-NPDVV 304
G C G VKT V V ++ ED+ +VV
Sbjct: 115 KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVV 174
Query: 305 SYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA---------------------VTYN- 342
++ +L+ G+ +A+ F EM G+K N V +N
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGFNV 234
Query: 343 ----TLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
+LI + + + + +G E + N+++ G+ G+ EAL +F
Sbjct: 235 ILATSLIDMYAKCGDLRTARYLFDGMPE-----RTLVSWNSIITGYSQNGDAEEALCMFL 289
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
M++ + PD T+ ++R G + + ++ + K G ++D +V A +M+
Sbjct: 290 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTG-FVKD---AAIVCALVNMY 345
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRR---- 514
K G A++ F L K+ D ++ ++IIG G G E L + R
Sbjct: 346 A---KTGDAESAKKAFEDLEKK---DTIAWTVVIIGLASHGH---GNEALSIFQRMQEKG 396
Query: 515 NFDPDSEIYQSLID-----GLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKG 569
N PD Y ++ GL+++G+ A L+ PT + ++ L + G
Sbjct: 397 NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE----PTVEHYGCMVDILSRAG 452
Query: 570 YAHESASLV 578
E+ LV
Sbjct: 453 RFEEAERLV 461
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 121/261 (46%), Gaps = 19/261 (7%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
+NS+I Y + G +E++ +F M +G++P VTF S++ + +G + + +S+ +
Sbjct: 268 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI-HAYV 326
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
S G D L+ + K + + F+ + D + + ++ G+ G
Sbjct: 327 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK----KDTIAWTVVIIGLASHGHG 382
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVD-KGLKPNAVTY 341
A ++ + M +K + PD ++Y +L ++E F EM D GL+P Y
Sbjct: 383 NEALSIFQRMQEKG-NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHY 441
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMM 401
++ L + ++ + +++ + V P+ L+NG C +++E L++ +++
Sbjct: 442 GCMVDILSRAGRFEEAERLVK-TMPV---KPNVNIWGALLNG-C---DIHENLELTDRIR 493
Query: 402 EWKVQPD---SATYSVLVRNL 419
+P+ S Y VL+ N+
Sbjct: 494 SMVAEPEELGSGIY-VLLSNI 513
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 185/447 (41%), Gaps = 40/447 (8%)
Query: 163 FNSLIRSYGRAGLFQE--SVKLFTSMKSVG-VSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
+N++IR + + + ++ LF M S V P+ TF S+L K G+ K +
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 220 EMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQK----------MSSFNCDPDIVTY 269
L YG D + + L+R + + D F K D +IV +
Sbjct: 153 LALK-YGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 270 NTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEM 329
N ++DG R G K A + M ++S VVS+ T++ GY + +A+ VF EM
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRS------VVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 330 VDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGN 389
++PN VT +++ + + ++ + E L E G D + L++ + G
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLE-LGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 390 LNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTP 449
+ +A+ VFE++ V T+S ++ G +A D K +R G P
Sbjct: 325 IEKAIHVFERLPRENV----ITWSAMINGFAIHG---QAGDAIDCFCK----MRQAGVRP 373
Query: 450 LVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP--TSYKILIIGHCKEGTFEAGYEL 507
AY ++ G + R F Q++ +P Y ++ + G + E
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 508 LVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLL- 566
++ M PD I+++L+ +G + + ++ +VP S + L+ +
Sbjct: 434 ILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANILM--DMVPHDSGAYVALSNMYA 488
Query: 567 KKGYAHESASLVVLLLEGKIRQNVTLS 593
+G E + + + + E IR++ S
Sbjct: 489 SQGNWSEVSEMRLRMKEKDIRKDPGCS 515
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 181/453 (39%), Gaps = 91/453 (20%)
Query: 164 NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLS 223
+SLI Y + G E++++F ++ P +VT++S++ K G A F M+
Sbjct: 81 SSLIYMYIKCGRMIEALRMFDELEK----PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVM 136
Query: 224 TYGVAPDTYTFNILIRGFCK--NSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGK 281
V PD T L+ K NS + F F+ D +V N+L++ ++
Sbjct: 137 ASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV--NSLLNCYAKSRA 194
Query: 282 VKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTY 341
K A N+ K + +K DV+S++T++ Y EAL+VF +M+D G +PN T
Sbjct: 195 FKEAVNLFKMIAEK------DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATV 248
Query: 342 NTLIKGLCEVQKIDKIKEVLEGALEVG-----------------GFSP------------ 372
+++ +++ ++ E A+ G FSP
Sbjct: 249 LCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR 308
Query: 373 -DTCTLNTLMNGHCNAGNLNEALKVFEKM-MEWKVQPDSATYSVLVRNLCHIGDFERAEK 430
D + L++G G + +++ F M +E +PD+ ++ + +G E+A+
Sbjct: 309 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKC 368
Query: 431 LYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKI 490
+ ++K G S P + A S+ + + G A + F + +
Sbjct: 369 FHSYVIKYGF-----DSNPFIGA--SLVELYSRCGSLGNASKVFNGIALK---------- 411
Query: 491 LIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQKMLKSS 550
D+ ++ SLI G G+ A +T M+KSS
Sbjct: 412 ----------------------------DTVVWTSLITGYGIHGKGTKALETFNHMVKSS 443
Query: 551 IV-PTTSTFHSILAGLLKKGYAHESASLVVLLL 582
V P TF SIL+ G HE + L++
Sbjct: 444 EVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 148/363 (40%), Gaps = 22/363 (6%)
Query: 232 YTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKG 291
Y +N L++ + ++ F M PD T + +V ++ G
Sbjct: 7 YQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG-EMIHG 65
Query: 292 MVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEV 351
VKK L D+ ++L+ Y + EAL +F+E+ KP+ VT+++++ G +
Sbjct: 66 FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE----KPDIVTWSSMVSGFEKN 121
Query: 352 QKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
+ E + +PD TL TL++ N V ++ D +
Sbjct: 122 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 181
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
+ L+ F+ A L+ + +K ++ ++ ++ +NG ++A
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVI-----------SWSTVIACYVQNGAAAEAL 230
Query: 472 RGFRQLMKRGTQDPTSYKILIIGHCKEG-TFEAGYELLVLMLRRNFDPDSEIYQSLIDGL 530
F +M GT+ + + ++ C E G + L +R+ + + ++ +L+D
Sbjct: 231 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 290
Query: 531 LQKGEPLLAYQTLQKMLKSSIVPTTSTFHSILAGLLKKGYAHES-ASLVVLLLEGKIRQN 589
++ P AY ++ + +V ++ ++++G G AH S ++LLE R +
Sbjct: 291 MKCFSPEEAYAVFSRIPRKDVV----SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 346
Query: 590 VTL 592
L
Sbjct: 347 AIL 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 123/298 (41%), Gaps = 38/298 (12%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLIL-----LKRGR------- 210
++++I Y + G E++ +F M G P+V T +L L++GR
Sbjct: 213 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 272
Query: 211 --------------TNMAKSVF--DEMLSTYGVAP--DTYTFNILIRGFCKNSMVDDGFR 252
+M F +E + + P D ++ LI GF N M
Sbjct: 273 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIE 332
Query: 253 FFQKMS-SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLR 311
F M N PD + ++ G ++ A ++K D NP + + +L+
Sbjct: 333 EFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGA--SLVE 390
Query: 312 GYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFS 371
Y ++ A VF + K + V + +LI G K K E ++
Sbjct: 391 LYSRCGSLGNASKVFNGIALK----DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVK 446
Query: 372 PDTCTLNTLMNGHCNAGNLNEALKVFEKMM-EWKVQPDSATYSVLVRNLCHIGDFERA 428
P+ T ++++ +AG ++E L++F+ M+ ++++ P+ Y+VLV L +GD + A
Sbjct: 447 PNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 504
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 12/189 (6%)
Query: 165 SLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLST 224
SL+ Y R G + K+F + V + SL+ G+ A F+ M+ +
Sbjct: 387 SLVELYSRCGSLGNASKVFNGI----ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 442
Query: 225 YGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKM-SSFNCDPDIVTYNTLVDGVCRAGKVK 283
V P+ TF ++ ++ +G R F+ M + + P++ Y LVD + R G +
Sbjct: 443 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 502
Query: 284 TAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNT 343
TA + K M +P TLL + QN + A V +++ + L+ N Y
Sbjct: 503 TAIEITKRM-----PFSPTPQILGTLLGACRIHQNGEMAETVAKKLFE--LESNHAGYYM 555
Query: 344 LIKGLCEVQ 352
L+ + V+
Sbjct: 556 LMSNVYGVK 564
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 138/325 (42%), Gaps = 31/325 (9%)
Query: 199 NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMS 258
N ++ LL+RG+ + A+ V+DEM +T + N +I G K V F M
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHK-----NTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 259 SFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGY--CMK 316
D +VT+ L+ R A + + M + S PD V++TTLL G +
Sbjct: 107 ----DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVP 162
Query: 317 QNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCT 376
QN + F + P N L+K CEV+++D + E E D+ T
Sbjct: 163 QNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE-----KDSVT 217
Query: 377 LNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELL 436
NTL+ G+ G E++ +F KM + QP T+S +++ + + DF ++L+ +
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 437 KKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGHC 496
G RD + + F K+ + + F ++ + D SY ++I +
Sbjct: 278 TTG-FSRD------ASVGNQILDFYSKHDRVLETRMLFDEMPE---LDFVSYNVVISSYS 327
Query: 497 KEGTFEAGYELLVLML-----RRNF 516
+ +EA M RRNF
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNF 352
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 146/410 (35%), Gaps = 117/410 (28%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTF------------------------ 198
FN+LI Y + GL+ ES+ LF M+ G PS TF
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 199 -----------NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV 247
N +L K R + +FDEM D ++N++I + +
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-----DFVSYNVVISSYSQADQY 332
Query: 248 DDGFRFFQKMS----------------------------SFNCDPDIVTY-------NTL 272
+ FF++M +C + T N+L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 273 VDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDK 332
VD + + A + K + +++ VS+T L+ GY K L +F +M
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRT------TVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 333 GLKPNAVTYNTLIKGLCEVQKI-------------DKIKEVLEG---------------A 364
L+ + T+ T++K + ++ V G A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 365 LEVGGFSPD--TCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHI 422
++V PD + N L++ H + G+ A+ F KM+E +QPDS + ++ H
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 423 GDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAER 472
G E+ + + + G TP Y M L +NG+ ++AE+
Sbjct: 567 GFVEQGTEYFQAMSPIY------GITPKKKHYACMLDLLGRNGRFAEAEK 610
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 161/397 (40%), Gaps = 38/397 (9%)
Query: 106 ALKFFNWLPQMGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFF-- 163
+L FF + MGF + + ML I +L + R + D
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL------HCQALLATADSILHV 388
Query: 164 -NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEML 222
NSL+ Y + +F+E+ +F S+ + V++ +L+ +++G +F +M
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLP----QRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 223 STYGVAPDTYTFNILIRGFCKNSMVDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKV 282
+ + D TF +++ + + G + + ++ + + LVD + G +
Sbjct: 445 GS-NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 283 KTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYN 342
K A V + M + + VS+ L+ + + + A+ F +M++ GL+P++V+
Sbjct: 504 KDAVQVFEEMPDR------NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 343 TLIKGLCEVQKIDKIKEVLEGALEVGGFSPD----TCTLNTLMNGHCNAGNLNEALKVFE 398
++ +++ E + + G +P C L+ L G EA K+ +
Sbjct: 558 GVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN----GRFAEAEKLMD 613
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMF 458
+M +PD +S ++ N C I + + E L LRD AAY SM
Sbjct: 614 EM---PFEPDEIMWSSVL-NACRIHKNQSLAERAAEKLFSMEKLRD------AAAYVSMS 663
Query: 459 QFLCKNGKTSKAERGFRQLMKRGTQDPTSYKILIIGH 495
G+ K + + +RG + +Y + + H
Sbjct: 664 NIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNH 700
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 169/422 (40%), Gaps = 67/422 (15%)
Query: 163 FNSLIRSYGRAGLFQESVKLFTSMKSVG-VSPSVVTF----------------------- 198
FN+L+R Y + SV +F M G V P +F
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 199 ------------NSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSM 246
+L+ + G A+ VFDEM P+ +N +I + +
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ-----PNLVAWNAVITACFRGND 187
Query: 247 VDDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVVSY 306
V F KM N ++N ++ G +AG++++A + M + D VS+
Sbjct: 188 VAGAREIFDKMLVRN----HTSWNVMLAGYIKAGELESAKRIFSEMPHR------DDVSW 237
Query: 307 TTLLRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKIDKIKEVLEGALE 366
+T++ G + +E+ + F E+ G+ PN V+ ++ C + ++L G +E
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA-CSQSGSFEFGKILHGFVE 296
Query: 367 VGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSATYSVLVRNLCHIGDFE 426
G+S N L++ + GN+ A VFE M E + +++ ++ L G E
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC---IVSWTSMIAGLAMHGQGE 353
Query: 427 RAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAERGFRQLMKRGTQDP- 485
A +L++E+ G+ TP ++ S+ G + E F ++ + +P
Sbjct: 354 EAVRLFNEMTAYGV-------TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPE 406
Query: 486 -TSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLLQKGEPLLAYQTLQ 544
Y ++ + + G + Y+ + M P + ++++L+ G LA Q Q
Sbjct: 407 IEHYGCMVDLYGRSGKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQVKQ 463
Query: 545 KM 546
++
Sbjct: 464 RL 465
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/397 (19%), Positives = 154/397 (38%), Gaps = 81/397 (20%)
Query: 103 PSKALKFFNWLPQMGFTHNDQ-SYFLMLEILGRARNLNVARNFLFSIKRKSNGTVKLEDR 161
P ++ F + + GF D S+ +++ + R+L F + +G LE
Sbjct: 86 PHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG--FQMHCQALKHG---LESH 140
Query: 162 FF--NSLIRSYGRAGLFQESVKLFTSMKSVGVSPSVVTFNSLLLILLKRGRTNMAKSVFD 219
F +LI YG G + + K+F M P++V +N+++ + A+ +FD
Sbjct: 141 LFVGTTLIGMYGGCGCVEFARKVFDEMHQ----PNLVAWNAVITACFRGNDVAGAREIFD 196
Query: 220 EML----STYGVA----------------------PDTYTFNILIRGFCKNSMVDDGFRF 253
+ML +++ V D +++ +I G N ++ F +
Sbjct: 197 KMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLY 256
Query: 254 FQKMSSFNCDPDIVTY-----------------------------------NTLVDGVCR 278
F+++ P+ V+ N L+D R
Sbjct: 257 FRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR 316
Query: 279 AGKVKTAHNVVKGMVKKSEDLNPDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLKPNA 338
G V A V +GM +K +VS+T+++ G M +EA+ +F EM G+ P+
Sbjct: 317 CGNVPMARLVFEGMQEKR-----CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDG 371
Query: 339 VTYNTLIKGLCEVQKIDKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFE 398
+++ +L+ I++ ++ V P+ +++ + +G L +A
Sbjct: 372 ISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFIC 431
Query: 399 KMMEWKVQPDSATYSVLVRNLCHIGDFERAEKLYDEL 435
+M + P + + L+ G+ E AE++ L
Sbjct: 432 QM---PIPPTAIVWRTLLGACSSHGNIELAEQVKQRL 465
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 301 PDVVSYTTLLRGYCMKQNIDEALVVFEEMVDKGLK-PNAVTYNTLIKGLCEVQKI----- 354
PD + TL+RGY ++ VF EM+ KG P++ ++ +IK + + +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 355 ---DKIKEVLEGALEVGGFSPDTCTLNTLMNGHCNAGNLNEALKVFEKMMEWKVQPDSAT 411
+K LE L VG TL+ + G + A KVF++M QP+
Sbjct: 128 MHCQALKHGLESHLFVG---------TTLIGMYGGCGCVEFARKVFDEMH----QPNLVA 174
Query: 412 YSVLVRNLCHIGDFERAEKLYDELLKKGILLRDDGSTPLVAAYKSMFQFLCKNGKTSKAE 471
++ ++ D A +++D++ L+R+ S + M K G+ A+
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKM-----LVRNHTS------WNVMLAGYIKAGELESAK 223
Query: 472 RGFRQLMKRGTQDPTSYKILIIGHCKEGTFEAGYELLVLMLRRNFDPDSEIYQSLIDGLL 531
R F ++ R D S+ +I+G G+F + + R P+ ++
Sbjct: 224 RIFSEMPHR---DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACS 280
Query: 532 QKG 534
Q G
Sbjct: 281 QSG 283
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 112/261 (42%), Gaps = 24/261 (9%)
Query: 128 MLEILGRARNLNVARNFLFSIKRKSNGTVKLEDRFFNSLIRSYGRAGLFQESVKLFTSMK 187
++++ R N+ +AR +F ++ V + S+I G +E+V+LF M
Sbjct: 310 LIDMYSRCGNVPMAR-LVFEGMQEKRCIVS-----WTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 188 SVGVSPSVVTFNSLLLILLKRGRTNMAKSVFDEMLSTYGVAPDTYTFNILIRGFCKNSMV 247
+ GV+P ++F SLL G + F EM Y + P+ + ++ + ++ +
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 248 DDGFRFFQKMSSFNCDPDIVTYNTLVDGVCRAGKVKTAHNVVKGMVKKSEDLNPDVV--- 304
+ F +M P + + TL+ G ++ A V + + + + + D+V
Sbjct: 424 QKAYDFICQMP---IPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLS 480
Query: 305 -SYTTL--------LRGYCMKQNIDEALVVFEEMVDKGLKPNAVTYNTLIKGLCEVQKID 355
+Y T +R + Q I + +V+ G T KG+ +++ +
Sbjct: 481 NAYATAGKWKDVASIRKSMIVQRIKKTTAW--SLVEVGKTMYKFTAGEKKKGI-DIEAHE 537
Query: 356 KIKEVLEGALEVGGFSPDTCT 376
K+KE++ + G++P+ +
Sbjct: 538 KLKEIILRLKDEAGYTPEVAS 558