Jatropha Genome Database

JcCA0079871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079871.10 - phase: 0 
         (121 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57220.1 | Symbols:  | UDP-GlcNAc:dolichol phosphate N-acetyl...    95   1e-20
AT2G41490.1 | Symbols: GPT | GPT (UDP-GLCNAC%3ADOLICHOL+PHOSPHAT...    94   1e-20

>AT3G57220.1 | Symbols:  | UDP-GlcNAc:dolichol phosphate
           N-acetylglucosamine-1-phosphate transferase, putative |
           chr3:21174516-21176904 FORWARD
          Length = 426

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/88 (54%), Positives = 58/88 (65%)

Query: 34  DSPIASPKSGFIFKVSIXXXXXXXXXXXXXXEIHPALQRSILINAALSLAGFFLTVKLIP 93
           D  +A PK G IF +S                +   L+R ILINA LSL GFF+T+KLIP
Sbjct: 36  DFQLAPPKLGVIFVISSLLCSLYLYLLCFHYNVDNELKRPILINAGLSLVGFFVTLKLIP 95

Query: 94  VASRYVLRRNLFGFDINKKGTPHGNVKV 121
           VA+RYVLRRN+FGFDINK+GTP G V+V
Sbjct: 96  VAARYVLRRNMFGFDINKRGTPQGEVRV 123


>AT2G41490.1 | Symbols: GPT | GPT
           (UDP-GLCNAC%3ADOLICHOL+PHOSPHATE+GLCNAC-1-
           P+TRANSFERASE);
           UDP-N-acetylglucosamine-dolichyl-phosphate
           N-acetylglucosaminephosphotransferase |
           chr2:17301762-17304030 FORWARD
          Length = 431

 Score = 94.4 bits (233), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 59/85 (69%)

Query: 37  IASPKSGFIFKVSIXXXXXXXXXXXXXXEIHPALQRSILINAALSLAGFFLTVKLIPVAS 96
           +A PK G IF +S               ++   L+RSILINA LSL GFF+T+K+IPV +
Sbjct: 44  LAPPKLGVIFVISTLLCSLYLYLLCFHYKVDNELKRSILINAGLSLVGFFVTLKMIPVTA 103

Query: 97  RYVLRRNLFGFDINKKGTPHGNVKV 121
           RYVLRRN+FGFDINK+GTP G++KV
Sbjct: 104 RYVLRRNMFGFDINKRGTPQGDIKV 128