Jatropha Genome Database

JcCA0079611.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079611.10 + phase: 0 /partial
         (136 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13820.1 | Symbols:  | hydrolase, alpha/beta fold family prot...   165   7e-42
AT5G39220.1 | Symbols:  | hydrolase, alpha/beta fold family prot...   160   3e-40

>AT1G13820.1 | Symbols:  | hydrolase, alpha/beta fold family protein
           | chr1:4735622-4737617 FORWARD
          Length = 339

 Score =  165 bits (418), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 96/121 (79%)

Query: 1   VSLLKSLPLRLYANTLAFNNISFFTILDWTNIGRLHCLLPWWEDATVNFMFSGGYNIISQ 60
           V LLKS+PLRLY N + FN IS  T  DWT IGRLHCL PWWEDATV+FM SGGYN+ S 
Sbjct: 205 VYLLKSIPLRLYVNFICFNGISLETSWDWTKIGRLHCLYPWWEDATVSFMTSGGYNVTSL 264

Query: 61  IKQVKKRTLIIYGENDKIVNYKLVVKLHSELGNAIMRQVADSGHLPHVDKPNCVAKLISD 120
           IK+V ++TLI++GE+D+I++ KL  +LH EL NA ++Q+++ GHLPHV+KP  V KLI++
Sbjct: 265 IKKVSQKTLILWGEDDQIISNKLAWRLHGELSNARVKQISNCGHLPHVEKPAAVTKLIAE 324

Query: 121 F 121
           F
Sbjct: 325 F 325


>AT5G39220.1 | Symbols:  | hydrolase, alpha/beta fold family protein
           | chr5:15705913-15708039 FORWARD
          Length = 330

 Score =  160 bits (404), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 91/122 (74%)

Query: 1   VSLLKSLPLRLYANTLAFNNISFFTILDWTNIGRLHCLLPWWEDATVNFMFSGGYNIISQ 60
           V LLKS PLRL AN LAF +      +DWTNIGRLHC +PWWEDA V+FM SGGYN+ S 
Sbjct: 204 VKLLKSFPLRLLANVLAFCSSPLSENIDWTNIGRLHCQMPWWEDAMVDFMISGGYNVASH 263

Query: 61  IKQVKKRTLIIYGENDKIVNYKLVVKLHSELGNAIMRQVADSGHLPHVDKPNCVAKLISD 120
           IK +  +TL++  END+IV+ +L VKL  EL NA++R+V DSGHLPHV+ P  + KLISD
Sbjct: 264 IKHIDHKTLVVCSENDQIVSNQLSVKLLCELANAVLREVPDSGHLPHVENPKHIVKLISD 323

Query: 121 FA 122
           FA
Sbjct: 324 FA 325