Jatropha Genome Database

JcCA0079261.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079261.20 + phase: 0 
         (204 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20600.1 | Symbols: NDR1 | NDR1 (non race-specific disease re...   134   3e-32
AT3G20590.1 | Symbols:  | non-race specific disease resistance p...   123   7e-29
AT3G20610.1 | Symbols:  | non-race specific disease resistance p...   100   8e-22
AT3G11660.1 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSE      51   5e-07

>AT3G20600.1 | Symbols: NDR1 | NDR1 (non race-specific disease
           resistance 1); signal transducer | chr3:7194877-7195536
           FORWARD
          Length = 219

 Score =  134 bits (338), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 112/187 (59%), Gaps = 17/187 (9%)

Query: 2   GNSRCKCCN---FTVGLVIAALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQ 58
           G + C CC    FT GL   +LF+W      KPKC +Q  ++PAL +  NS  NTTL F 
Sbjct: 11  GRNCCTCCLSFIFTAGL--TSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFM 68

Query: 59  LKLENTNIVKGVYYDPVNVTFFDSPNRTH-------SIGNFTIPKFYQGRNKKAIKSGEI 111
           ++ +N N  KG+YYD V++  F + N T         +GN+T+PKFYQG  KKA K G++
Sbjct: 69  VRCDNPNKDKGIYYDDVHLN-FSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 112 NDTGLDIEAVLRAV-SNGSVVFRVDMATSVRNKFVVFKTKRRRINVGAYVNVSNQGTQVN 170
               L+ + VLRAV  NGS VFR+D+ T VR K V +KTKR  + VGA V V+  G +  
Sbjct: 128 KP--LNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQ 185

Query: 171 PRKGVRL 177
            +KG+++
Sbjct: 186 -KKGIKM 191


>AT3G20590.1 | Symbols:  | non-race specific disease resistance
           protein, putative | chr3:7191686-7192453 FORWARD
          Length = 255

 Score =  123 bits (309), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 14/179 (7%)

Query: 7   KCC----NFTVGLVIAALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQLKLE 62
           KCC     F     + AL +W      KPKC +Q  Y+PAL+++ +S  NTTL F ++ +
Sbjct: 13  KCCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCD 72

Query: 63  NTNIVKGVYYDPVNVTFFDSPNRTHS------IGNFTIPKFYQGRNKKAIKSGEINDTGL 116
           N N  KG+YYD V++TF      T +      + N+T+PKFYQG  KKA K G++    L
Sbjct: 73  NPNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQV--WPL 130

Query: 117 DIEAVLRAV-SNGSVVFRVDMATSVRNKFVVFKTKR-RRINVGAYVNVSNQGTQVNPRK 173
           + + VLRAV  NGS VFR+D+ T VR K V +KTK  RRI VGA V V+  G + N ++
Sbjct: 131 NNQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVKANEKE 189


>AT3G20610.1 | Symbols:  | non-race specific disease resistance
           protein, putative | chr3:7196723-7197391 FORWARD
          Length = 222

 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 99/166 (59%), Gaps = 7/166 (4%)

Query: 17  IAALFMW-QRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQLKLENTNIVKGVYYDPV 75
           + AL +W        P+C +   Y+PALN+S  S  NTTL F ++L+N N  +G+YY+ +
Sbjct: 26  LLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQGIYYEDL 85

Query: 76  NVTFFDSPNRTH-SIGNFTIPKFYQGRNKKAIKSGEINDTGLDIEAVLRAV-SNGSVVFR 133
           +++F    N +   + N+T+P+FYQG  KKA K G+      + + V++AV  NGS +FR
Sbjct: 86  HLSFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQ--ALPFNNQTVIQAVLPNGSAIFR 143

Query: 134 VDMATSVRNKFVVFKTKRRRINVGAYVNVSNQG-TQVNPRK-GVRL 177
           VD+   V+ K + +KTKR ++     + V+  G T+V  ++ G+++
Sbjct: 144 VDLKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKM 189


>AT3G11660.1 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSE
          Length = 209

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 15/166 (9%)

Query: 15  LVIAALFMWQRFTTAKPKCFLQEIYVPALNQSSNSPSNTTLFFQLKLE--NTNIVKGVYY 72
           + +  L +W     +KP+  LQ+  V A N S N P+  T  FQ+ L   N N   G+YY
Sbjct: 29  IFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYY 88

Query: 73  DPVNVTFFDSPNRTHSIGNFT-IPKFYQGRNKKAIKSGEINDTGLDIEAVLRAVS----- 126
           D ++V    +  R+  I   T IP  YQG     I S  +  T + I A    VS     
Sbjct: 89  DRLDVY---ATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPI-APFNGVSLDTDK 144

Query: 127 -NGSVVFRVDMATSVRNKFVVFKTKRRRINV--GAYVNVSNQGTQV 169
            NG V+  +     VR K   F T +  ++V   AY+N  N+   V
Sbjct: 145 DNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFGNKANGV 190