Jatropha Genome Database

JcCA0078491.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078491.20 - phase: 0 
         (221 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1 (LO...   290   4e-79
AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1 (LO...   290   4e-79
AT5G23670.2 | Symbols: LCB2 | LCB2; protein binding / serine C-p...    84   6e-17
AT5G23670.1 | Symbols: LCB2 | LCB2; protein binding / serine C-p...    84   6e-17
AT3G48780.1 | Symbols: ATSPT1, SPT1 | SPT1 (SERINE PALMITOYLTRAN...    84   7e-17
AT3G48790.1 | Symbols:  | serine C-palmitoyltransferase, putativ...    77   7e-15
AT5G04620.2 | Symbols: ATBIOF | ATBIOF (BIOTIN F); 8-amino-7-oxo...    57   8e-09
AT5G04620.1 | Symbols: ATBIOF | ATBIOF (BIOTIN F); 8-amino-7-oxo...    57   1e-08

>AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1
           (LONG-CHAIN BASE1); protein binding / serine
           C-palmitoyltransferase | chr4:17218598-17221124 FORWARD
          Length = 482

 Score =  290 bits (743), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 134/185 (72%), Positives = 156/185 (84%)

Query: 35  DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           DEGVHWGIQNGL LSRSTIVYFKHNDMESL+  LEK+  + KR+K LRRYI+ EAVYQNS
Sbjct: 199 DEGVHWGIQNGLQLSRSTIVYFKHNDMESLRITLEKIMTKYKRSKNLRRYIVAEAVYQNS 258

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHAL 154
           GQIAPLDEI++LKEKY FRV+L+ESNS GVLGRSG+GL E++ VP+EKID++TAAMGHAL
Sbjct: 259 GQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLAEHHSVPIEKIDVVTAAMGHAL 318

Query: 155 ATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVIEDNPALVTKLKENIA 214
           ATEGGFCTG ARIID+QRLSSSGY F            ITAIDVI+ NP ++ KLK+N+A
Sbjct: 319 ATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAIDVIDQNPDMLVKLKQNVA 378

Query: 215 VLWKG 219
           +LWKG
Sbjct: 379 LLWKG 383


>AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1
           (LONG-CHAIN BASE1); protein binding / serine
           C-palmitoyltransferase | chr4:17218598-17221124 FORWARD
          Length = 482

 Score =  290 bits (743), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 134/185 (72%), Positives = 156/185 (84%)

Query: 35  DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           DEGVHWGIQNGL LSRSTIVYFKHNDMESL+  LEK+  + KR+K LRRYI+ EAVYQNS
Sbjct: 199 DEGVHWGIQNGLQLSRSTIVYFKHNDMESLRITLEKIMTKYKRSKNLRRYIVAEAVYQNS 258

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHAL 154
           GQIAPLDEI++LKEKY FRV+L+ESNS GVLGRSG+GL E++ VP+EKID++TAAMGHAL
Sbjct: 259 GQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLAEHHSVPIEKIDVVTAAMGHAL 318

Query: 155 ATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVIEDNPALVTKLKENIA 214
           ATEGGFCTG ARIID+QRLSSSGY F            ITAIDVI+ NP ++ KLK+N+A
Sbjct: 319 ATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAIDVIDQNPDMLVKLKQNVA 378

Query: 215 VLWKG 219
           +LWKG
Sbjct: 379 LLWKG 383


>AT5G23670.2 | Symbols: LCB2 | LCB2; protein binding / serine
           C-palmitoyltransferase | chr5:7981889-7985037 FORWARD
          Length = 489

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 3/164 (1%)

Query: 39  HWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENK-RAKKLRRYIIV--EAVYQNSG 95
           H  I NG   S +TI  F+HN    L+ VL +  AE + R  +  + IIV  E +Y   G
Sbjct: 195 HSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWKKIIVVVEGIYSMEG 254

Query: 96  QIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHALA 155
           +I  L E++ + +KY   V L+E++SIG +G++GKG+ E  GV    +D++      +  
Sbjct: 255 EICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDTADVDVMMGTFTKSFG 314

Query: 156 TEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVI 199
           + GG+  G+  +I + +     + +            I+AI VI
Sbjct: 315 SCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVI 358


>AT5G23670.1 | Symbols: LCB2 | LCB2; protein binding / serine
           C-palmitoyltransferase | chr5:7981889-7985037 FORWARD
          Length = 489

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 3/164 (1%)

Query: 39  HWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENK-RAKKLRRYIIV--EAVYQNSG 95
           H  I NG   S +TI  F+HN    L+ VL +  AE + R  +  + IIV  E +Y   G
Sbjct: 195 HSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWKKIIVVVEGIYSMEG 254

Query: 96  QIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHALA 155
           +I  L E++ + +KY   V L+E++SIG +G++GKG+ E  GV    +D++      +  
Sbjct: 255 EICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDTADVDVMMGTFTKSFG 314

Query: 156 TEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVI 199
           + GG+  G+  +I + +     + +            I+AI VI
Sbjct: 315 SCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVI 358


>AT3G48780.1 | Symbols: ATSPT1, SPT1 | SPT1 (SERINE
           PALMITOYLTRANSFERASE 1); serine C-palmitoyltransferase |
           chr3:18089346-18092276 FORWARD
          Length = 489

 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 3/164 (1%)

Query: 39  HWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENK-RAKKLRRYIIV--EAVYQNSG 95
           H  I NG   S +TI  F+HN    L+ VL++  AE + R  +  + IIV  E +Y   G
Sbjct: 195 HTSIVNGARGSGATIRVFQHNTPGHLEKVLKEQIAEGQPRTHRPWKKIIVVVEGIYSMEG 254

Query: 96  QIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHALA 155
           +I  L EI+ + +KY   V L+E++SIG +G++G+G+ E  GV    +DI+      +  
Sbjct: 255 EICHLPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTSDVDIMMGTFTKSFG 314

Query: 156 TEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVI 199
           + GG+  G+  +I + +     + +            I+AI VI
Sbjct: 315 SCGGYIAGSKDLIQYLKHQCPAHLYATSISTPSATQIISAIKVI 358


>AT3G48790.1 | Symbols:  | serine C-palmitoyltransferase, putative |
           chr3:18093404-18095181 FORWARD
          Length = 350

 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 4/161 (2%)

Query: 39  HWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNSGQIA 98
           H  I NG   S +TI  F+HN ++  ++++E     ++  KK+   ++VE +Y   G+I 
Sbjct: 59  HTSIINGARGSGATIRVFQHNILK--EHIIEGQPRTHRPWKKI--IVVVEGIYSMEGEIC 114

Query: 99  PLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHALATEG 158
            L EI+ +  +Y   V L+E++SIG +G++G+G+ E  GV   ++DI+      +L + G
Sbjct: 115 DLPEIVSVCSEYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTTEVDIMMGTFTKSLGSCG 174

Query: 159 GFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVI 199
           G+  G+  ++ + +     + +            I+AI VI
Sbjct: 175 GYIAGSKDLVQYLKQHYPAHLYATSISTPAAQQVISAIKVI 215


>AT5G04620.2 | Symbols: ATBIOF | ATBIOF (BIOTIN F);
           8-amino-7-oxononanoate synthase/ transaminase |
           chr5:1327292-1329934 FORWARD
          Length = 476

 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 14/146 (9%)

Query: 39  HWGIQNGLYLSRST----IVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           H  I +G+ L+       +  ++H DM  L ++L          K  R+ ++ ++++   
Sbjct: 210 HASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSN-------CKMKRKVVVTDSLFSMD 262

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHAL 154
           G  AP++E+ +L++KY F +++++++   V G +G G+ E +    + +D+    +  A 
Sbjct: 263 GDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEAD-VDLCVGTLSKAA 321

Query: 155 ATEGGFCTGTARIIDHQRLSSSGYTF 180
              GGF   + +    Q + S G +F
Sbjct: 322 GCHGGFIACSKKW--KQLIQSRGRSF 345


>AT5G04620.1 | Symbols: ATBIOF | ATBIOF (BIOTIN F);
           8-amino-7-oxononanoate synthase/ transaminase |
           chr5:1328004-1329934 FORWARD
          Length = 343

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 14/146 (9%)

Query: 39  HWGIQNGLYLSRST----IVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           H  I +G+ L+       +  ++H DM  L ++L          K  R+ ++ ++++   
Sbjct: 77  HASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSN-------CKMKRKVVVTDSLFSMD 129

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHAL 154
           G  AP++E+ +L++KY F +++++++   V G +G G+ E +    + +D+    +  A 
Sbjct: 130 GDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEAD-VDLCVGTLSKAA 188

Query: 155 ATEGGFCTGTARIIDHQRLSSSGYTF 180
              GGF   + +    Q + S G +F
Sbjct: 189 GCHGGFIACSKKW--KQLIQSRGRSF 212