Jatropha Genome Database

JcCA0077901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0077901.10 + phase: 1 /partial
         (437 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80830.1 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | NRAMP1 (NATURAL...   638   0.0  
AT1G15960.1 | Symbols: NRAMP6, ATNRAMP6 | NRAMP6; inorganic anio...   636   0.0  
AT5G67330.1 | Symbols: ATNRAMP4, NRAMP4 | ATNRAMP4; inorganic an...   239   2e-63
AT1G47240.1 | Symbols: NRAMP2, ATNRAMP2 | NRAMP2; inorganic anio...   238   6e-63
AT4G18790.1 | Symbols: NRAMP5, ATNRAMP5 | NRAMP5; inorganic anio...   236   3e-62
AT2G23150.1 | Symbols: NRAMP3, ATNRAMP3 | NRAMP3 (NATURAL RESIST...   233   2e-61
AT5G03280.1 | Symbols: EIN2, PIR2, CKR1, ERA3, ORE3, ORE2, ATEIN...    78   1e-14

>AT1G80830.1 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | NRAMP1 (NATURAL
           RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1); inorganic
           anion transmembrane transporter/ manganese ion
           transmembrane transporter/ metal ion transmembrane
           transporter | chr1:30373066-30375644 REVERSE
          Length = 532

 Score =  638 bits (1645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/436 (72%), Positives = 354/436 (81%), Gaps = 11/436 (2%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFRIPIWIXXXXXXXX 60
           KHLAE C+AEY +VPNF+LW++AEIA+VACDIPEVIGTAFALNMLF IP+WI        
Sbjct: 107 KHLAEQCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLS 166

Query: 61  XXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGATG 120
                  Q+YGVRKLEFLIAFLVFTIA+CFFVEL Y+KP   EVL+GLFVPQLKG+GATG
Sbjct: 167 TLILLALQKYGVRKLEFLIAFLVFTIAICFFVELHYSKPDPGEVLHGLFVPQLKGNGATG 226

Query: 121 LAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRYYLIESAFALAVAFLINVSVI 180
           LAISLLGAMVMPHNLFLHSALVLSRKIPRS  GIKEACR+YLIES  AL VAFLINVSVI
Sbjct: 227 LAISLLGAMVMPHNLFLHSALVLSRKIPRSASGIKEACRFYLIESGLALMVAFLINVSVI 286

Query: 181 SVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLFAIALLASGQSSTITGT 240
           SVSGAVCN+ NL+ ED++NC+DLDLNKASFLL+NV+G WSSKLFAIALLASGQSSTITGT
Sbjct: 287 SVSGAVCNAPNLSPEDRANCEDLDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTITGT 346

Query: 241 YAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIASMILSFELP 300
           YAGQYVMQGFLDLRL PW+RN LTRCLAI+PSLIVALIGGS+GAGKLIIIASMILSFELP
Sbjct: 347 YAGQYVMQGFLDLRLEPWLRNLLTRCLAIIPSLIVALIGGSAGAGKLIIIASMILSFELP 406

Query: 301 FALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGFIKLLLHGHLKVV 360
           FAL+PLLKFTSCKTKMG + N   I+ALTW++G LIM IN+Y+L + FIKLL+H H+K++
Sbjct: 407 FALVPLLKFTSCKTKMGSHVNPMAITALTWVIGGLIMGINIYYLVSSFIKLLIHSHMKLI 466

Query: 361 AAVFLGIFGFSAMXXXXXXXXXXXFRKNKGATPLLALTTPEAREMAIGCGDTSVHDLPRE 420
             VF GI GF+ +           FRKN+ AT LL           I     +V  LPR+
Sbjct: 467 LVVFCGILGFAGIALYLAAIAYLVFRKNRVATSLL-----------ISRDSQNVETLPRQ 515

Query: 421 DIVNMQLPQTRSTEDV 436
           DIVNMQLP   ST DV
Sbjct: 516 DIVNMQLPCRVSTSDV 531


>AT1G15960.1 | Symbols: NRAMP6, ATNRAMP6 | NRAMP6; inorganic anion
           transmembrane transporter/ metal ion transmembrane
           transporter | chr1:5482202-5485066 REVERSE
          Length = 527

 Score =  636 bits (1641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/431 (72%), Positives = 353/431 (81%), Gaps = 13/431 (3%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFRIPIWIXXXXXXXX 60
           KHLAEHC+AEY +VPNF+LW++AEIA+VACDIPEVIGTAFALNMLF IP+WI        
Sbjct: 99  KHLAEHCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLS 158

Query: 61  XXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGATG 120
                  Q+YG+RKLEFLIAFLVFTIA+CFFVEL Y+KP   EVLYGLFVPQLKG+GATG
Sbjct: 159 TLILLALQQYGIRKLEFLIAFLVFTIALCFFVELHYSKPDPKEVLYGLFVPQLKGNGATG 218

Query: 121 LAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRYYLIESAFALAVAFLINVSVI 180
           LAISLLGAMVMPHNLFLHSALVLSRKIPRSV GIKEACRYYLIES  AL VAFLINVSVI
Sbjct: 219 LAISLLGAMVMPHNLFLHSALVLSRKIPRSVTGIKEACRYYLIESGLALMVAFLINVSVI 278

Query: 181 SVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLFAIALLASGQSSTITGT 240
           SVSGAVCN+S+L+ ED+++C+DLDLNKASFLL+NV+G WSSKLFAIALLASGQSSTITGT
Sbjct: 279 SVSGAVCNASDLSPEDRASCQDLDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTITGT 338

Query: 241 YAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIASMILSFELP 300
           YAGQYVMQGFLDLRL PW+RNFLTRCLAI+PSLIVALIGGS+GAGKLIIIASMILSFELP
Sbjct: 339 YAGQYVMQGFLDLRLEPWLRNFLTRCLAIIPSLIVALIGGSAGAGKLIIIASMILSFELP 398

Query: 301 FALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGFIKLLLHGHLKVV 360
           FAL+PLLKFTS KTKMG +ANS  IS++TW++G LIM IN+Y+L + FIKLLLH H+ +V
Sbjct: 399 FALVPLLKFTSSKTKMGSHANSLVISSVTWIIGGLIMGINIYYLVSSFIKLLLHSHMNLV 458

Query: 361 AAVFLGIFGFSAMXXXXXXXXXXXFRKNK--GATPLLALTTPEAREMAIGCGDTSVHDLP 418
           A VFLG+ GFS +            RKN+   +T  L  +  +  E            LP
Sbjct: 459 AIVFLGVLGFSGIATYLAAISYLVLRKNRESSSTHFLDFSNSQTEE-----------TLP 507

Query: 419 REDIVNMQLPQ 429
           REDI NMQLP 
Sbjct: 508 REDIANMQLPN 518


>AT5G67330.1 | Symbols: ATNRAMP4, NRAMP4 | ATNRAMP4; inorganic anion
           transmembrane transporter/ manganese ion transmembrane
           transporter/ metal ion transmembrane transporter |
           chr5:26861822-26863580 FORWARD
          Length = 512

 Score =  239 bits (610), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/355 (39%), Positives = 213/355 (60%), Gaps = 14/355 (3%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFR--IPIWIXXXXXX 58
           +HLAE C+ EYP     +LWI+AEIA++  DI EVIG+A A+ +L    +P+W       
Sbjct: 113 RHLAELCREEYPTWARMVLWIMAEIALIGADIQEVIGSAIAIKILSNGLVPLWAGVVITA 172

Query: 59  XXXXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGA 118
                    + YG+RKLE + A L+ T+A+ F    G  KP+  E+L G  VP+L     
Sbjct: 173 LDCFIFLFLENYGIRKLEAVFAILIATMALAFAWMFGQTKPSGTELLVGALVPKLSSR-T 231

Query: 119 TGLAISLLGAMVMPHNLFLHSALVLSRKI-PRSVRGIKEACRYYLIESAFALAVAFLINV 177
              A+ ++G ++MPHN+FLHSALV SR++ P+    +KEA +YY IES  ALAV+F+INV
Sbjct: 232 IKQAVGIVGCIIMPHNVFLHSALVQSREVDPKKRFRVKEALKYYSIESTGALAVSFIINV 291

Query: 178 SVISVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLF--AIALLASGQSS 235
            V +V      + +    + ++   L  N   +L     G +   L+  AI +LA+GQSS
Sbjct: 292 FVTTVF-----AKSFYGTEIADTIGLA-NAGQYLQDKYGGGFFPILYIWAIGVLAAGQSS 345

Query: 236 TITGTYAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGA--GKLIIIASM 293
           TITGTYAGQ++M GFL+L++  W+R  +TR  AI+P++IVAL+  SS +   +L    ++
Sbjct: 346 TITGTYAGQFIMGGFLNLKMKKWVRALITRSCAIIPTMIVALVFDSSDSMLDELNEWLNV 405

Query: 294 ILSFELPFALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGF 348
           + S ++PFA+IPLL   S +  MG +     +  ++W+V +L+++IN Y +   F
Sbjct: 406 LQSVQIPFAVIPLLCLVSNEQIMGSFKIQPLVQTISWIVAALVIAINGYLMVDFF 460


>AT1G47240.1 | Symbols: NRAMP2, ATNRAMP2 | NRAMP2; inorganic anion
           transmembrane transporter/ metal ion transmembrane
           transporter | chr1:17309043-17311308 REVERSE
          Length = 530

 Score =  238 bits (607), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 139/356 (39%), Positives = 212/356 (59%), Gaps = 14/356 (3%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFR--IPIWIXXXXXX 58
           +HLAE C+ EYP    ++LW +AE+A++  DI EVIG+A A+ +L R  +P+W       
Sbjct: 129 RHLAELCRDEYPTWARYVLWSMAELALIGADIQEVIGSAIAIQILSRGFLPLWAGVVITA 188

Query: 59  XXXXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGA 118
                    + YGVRKLE + A L+ T+ + F    G  KP+  E++ G+ +P+L     
Sbjct: 189 SDCFLFLFLENYGVRKLEAVFAVLIATMGLSFAWMFGETKPSGKELMIGILLPRLSSK-T 247

Query: 119 TGLAISLLGAMVMPHNLFLHSALVLSRKI-PRSVRGIKEACRYYLIESAFALAVAFLINV 177
              A+ ++G ++MPHN+FLHSALV SRKI P+    ++EA  YYLIES+ AL ++F+IN+
Sbjct: 248 IRQAVGVVGCVIMPHNVFLHSALVQSRKIDPKRKSRVQEALNYYLIESSVALFISFMINL 307

Query: 178 SVISVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLF--AIALLASGQSS 235
            V +V      +      +++N   L +N   +L +   G     L+   I LLA+GQSS
Sbjct: 308 FVTTVF-----AKGFYGTEKANNIGL-VNAGQYLQEKFGGGLLPILYIWGIGLLAAGQSS 361

Query: 236 TITGTYAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIA--SM 293
           TITGTYAGQ++M GFL+LRL  W+R  +TR  AIVP++IVA++  +S A   ++    ++
Sbjct: 362 TITGTYAGQFIMGGFLNLRLKKWMRAVITRSCAIVPTMIVAIVFNTSEASLDVLNEWLNV 421

Query: 294 ILSFELPFALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGFI 349
           + S ++PFAL+PLL   S +  MG +     +  + W V +L+M IN Y L   F+
Sbjct: 422 LQSVQIPFALLPLLTLVSKEEIMGDFKIGPILQRIAWTVAALVMIINGYLLLDFFV 477


>AT4G18790.1 | Symbols: NRAMP5, ATNRAMP5 | NRAMP5; inorganic anion
           transmembrane transporter/ metal ion transmembrane
           transporter | chr4:10317785-10319660 REVERSE
          Length = 530

 Score =  236 bits (601), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/381 (38%), Positives = 221/381 (58%), Gaps = 24/381 (6%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFR--IPIWIXXXXXX 58
           +HLAE C++EYP     +LW +AE+A++  DI EVIG+A AL +L R  +PIW+      
Sbjct: 131 RHLAEICRSEYPSWARILLWFMAEVALIGADIQEVIGSAIALQILTRGFLPIWVGVIITS 190

Query: 59  XXXXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGA 118
                    ++ G+RKLE L A L+ T+A+ F       KP+  E+  G+ +P+L G   
Sbjct: 191 FDCFLISYLEKCGMRKLEGLFAVLIATMALSFAWMFNETKPSVEELFIGIIIPKL-GSKT 249

Query: 119 TGLAISLLGAMVMPHNLFLHSALVLSRKI-PRSVRGIKEACRYYLIESAFALAVAFLINV 177
              A+ ++G ++ PHN+FLHSALV SRK  P+ +  ++EA  YY IES+ AL V+F+IN+
Sbjct: 250 IREAVGVVGCVITPHNVFLHSALVQSRKTDPKEINRVQEALNYYTIESSAALFVSFMINL 309

Query: 178 SVISVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLF--AIALLASGQSS 235
            V +V      +       Q++   L +N   +L +   G     L+   I LLA+GQSS
Sbjct: 310 FVTAVF-----AKGFYGTKQADSIGL-VNAGYYLQEKYGGGVFPILYIWGIGLLAAGQSS 363

Query: 236 TITGTYAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIA---S 292
           TITGTYAGQ++M+GFLDL++  W+  F+TR  AIVP++ VA++  +S  G L ++    +
Sbjct: 364 TITGTYAGQFIMEGFLDLQMEQWLSAFITRSFAIVPTMFVAIMFNTS-EGSLDVLNEWLN 422

Query: 293 MILSFELPFALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGF---I 349
           ++ S ++PFA+IPLL   S +  MG++    ++  L W V   +M IN Y L   F   +
Sbjct: 423 ILQSMQIPFAVIPLLTMVSNEHIMGVFKIGPSLEKLAWTVAVFVMMINGYLLLDFFMAEV 482

Query: 350 KLLLHGHLKVVAAVFLGIFGF 370
           +  L G L     VF G+ G+
Sbjct: 483 EGFLVGFL-----VFGGVVGY 498


>AT2G23150.1 | Symbols: NRAMP3, ATNRAMP3 | NRAMP3 (NATURAL
           RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3); inorganic
           anion transmembrane transporter/ manganese ion
           transmembrane transporter/ metal ion transmembrane
           transporter | chr2:9856422-9858565 REVERSE
          Length = 509

 Score =  233 bits (594), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/351 (39%), Positives = 207/351 (58%), Gaps = 14/351 (3%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFR--IPIWIXXXXXX 58
           +HLAE C+ EYP     +LW++AE+A++  DI EVIG+A A+ +L    +P+W       
Sbjct: 117 RHLAELCRDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWAGVVITA 176

Query: 59  XXXXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGA 118
                    + YG+RKLE + A L+ T+ V F    G AKP+ +E+L G+ VP+L     
Sbjct: 177 LDCFVFLFLENYGIRKLEAVFAVLIATMGVSFAWMFGQAKPSGSELLIGILVPKLSSR-T 235

Query: 119 TGLAISLLGAMVMPHNLFLHSALVLSRKI-PRSVRGIKEACRYYLIESAFALAVAFLINV 177
              A+ ++G ++MPHN+FLHSALV SR++  R    ++EA  YY IES  AL ++FLIN+
Sbjct: 236 IQKAVGVVGCIIMPHNVFLHSALVQSREVDKRQKYRVQEALNYYTIESTIALFISFLINL 295

Query: 178 SVISVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLF--AIALLASGQSS 235
            V +V      +      D +N   L +N   +L +   G     L+  AI LLA+GQSS
Sbjct: 296 FVTTVF-----AKGFYNTDLANSIGL-VNAGQYLQEKYGGGVFPILYIWAIGLLAAGQSS 349

Query: 236 TITGTYAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLII--IASM 293
           TITGTYAGQ++M GFL+ ++  W+R  +TR  AI+P++IVAL+  SS A   ++    ++
Sbjct: 350 TITGTYAGQFIMGGFLNFKMKKWLRALITRSCAIIPTIIVALVFDSSEATLDVLNEWLNV 409

Query: 294 ILSFELPFALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFL 344
           + S ++PFALIPLL   S +  MG +        + WLV +L++ IN Y L
Sbjct: 410 LQSIQIPFALIPLLCLVSKEQIMGSFKIGPLYKTIAWLVAALVIMINGYLL 460


>AT5G03280.1 | Symbols: EIN2, PIR2, CKR1, ERA3, ORE3, ORE2, ATEIN2 |
           EIN2 (ETHYLENE INSENSITIVE 2); transporter |
           chr5:788589-793066 FORWARD
          Length = 1294

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 145/342 (42%), Gaps = 55/342 (16%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFRIPIWIXXXXXXXX 60
           KHLA+ C  EY +     L I AE + +  D+  V+G A ALN+LF + +          
Sbjct: 79  KHLAQICNEEYDKWTCMFLGIQAEFSAILLDLTMVVGVAHALNLLFGVEL---------- 128

Query: 61  XXXXXXXQRYGVRKLEFLIAFLVFTIAV-CFFVELGYAKP----AANEVL----YGLFVP 111
                     GV    FL A   F   V   F+E G A      +A  VL     G+ + 
Sbjct: 129 --------STGV----FLAAMDAFLFPVFASFLENGMANTVSIYSAGLVLLLYVSGVLLS 176

Query: 112 Q-------------LKGDGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEAC 158
           Q             L G+ A  L + LLGA ++PHN ++HS          S       C
Sbjct: 177 QSEIPLSMNGVLTRLNGESAFAL-MGLLGASIVPHNFYIHSYFA-GESTSSSDVDKSSLC 234

Query: 159 RYYLIESAFALAVAFLINVSVISVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNV-LG 217
           + +L       +   L+N  +++ +  V +S+ L          L  + A  L++ V + 
Sbjct: 235 QDHLFAIFGVFSGLSLVNYVLMNAAANVFHSTGLVV--------LTFHDALSLMEQVFMS 286

Query: 218 SWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVAL 277
                +F + L  S Q + +   + G+ V+  FL + +  W+     R LA+ P+L    
Sbjct: 287 PLIPVVFLMLLFFSSQITALAWAFGGEVVLHDFLKIEIPAWLHRATIRILAVAPALYCVW 346

Query: 278 IGGSSGAGKLIIIASMILSFELPFALIPLLKFTSCKTKMGMY 319
             G+ G  +L+I   ++++  LP ++IPL +  S +  MG++
Sbjct: 347 TSGADGIYQLLIFTQVLVAMMLPCSVIPLFRIASSRQIMGVH 388