Jatropha Genome Database

JcCA0077581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0077581.10 + phase: 0 
         (175 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48820.1 | Symbols: KRP3, ICK6 | ICK6 (INHIBITOR/INTERACTOR W...    79   1e-15
AT3G24810.1 | Symbols: ICK3, KRP5 | ICK3; cyclin-dependent prote...    53   1e-07

>AT5G48820.1 | Symbols: KRP3, ICK6 | ICK6 (INHIBITOR/INTERACTOR WITH
           CYCLIN-DEPENDENT KINASE); cyclin binding /
           cyclin-dependent protein kinase inhibitor |
           chr5:19792608-19794346 REVERSE
          Length = 222

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 80/149 (53%), Gaps = 17/149 (11%)

Query: 1   MGKYMKKSKITADVAVMELSLSHSQSTTLGVRTR-AKTLALQRLHXXXXXXXXXXXXXXX 59
           MGKYMKKSKIT D++VME+S + + S   GVRTR AKTLAL+RL+               
Sbjct: 1   MGKYMKKSKITGDISVMEVSKATAPSP--GVRTRAAKTLALKRLN---SSAADSALPNDS 55

Query: 60  XXYLQLRSRRLEKHPPPLLNGTKKPEIPQQLASNKKLPKGSSRLSKVKAVAGDFEKVEEG 119
             YLQLRSRRLEK  P  L   K+P  P+   S  K     SR+  V +V     +    
Sbjct: 56  SCYLQLRSRRLEK--PSSLIEPKQP--PRVHRSGIKESGSRSRVDSVNSVP--VAQSSNE 109

Query: 120 EGCFDKKCEAEDLGIEASFGENYLEFESR 148
           + CFD       + ++ S GEN L FESR
Sbjct: 110 DECFDNF-----VSVQVSCGENSLGFESR 133


>AT3G24810.1 | Symbols: ICK3, KRP5 | ICK3; cyclin-dependent protein
           kinase inhibitor | chr3:9060990-9061742 FORWARD
          Length = 189

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 62/140 (44%), Gaps = 27/140 (19%)

Query: 1   MGKYMKKSKITADVAVMELSLSHSQSTTLGVRTR---AKTLALQRLHXXXXXXXXXXXXX 57
           MGKY+KKSK+   V+V +     S    LG RTR   AK LAL RL              
Sbjct: 1   MGKYIKKSKVAGAVSVKD----KSHPPALGFRTRAAAAKNLALHRLR-------SHSDEA 49

Query: 58  XXXXYLQLRSRRLEKHPPPLLNGTKKPE----IPQQLASNKKLPKGSSRLSK-------V 106
               YLQLRSRRL K   PLL  T+K +    IP       K P+ SS  +K        
Sbjct: 50  DSFNYLQLRSRRLVKL--PLLTNTRKQQKQQLIPSVNQCQTKNPRASSGPAKKLEPDTTT 107

Query: 107 KAVAGDFEKVEEGEGCFDKK 126
           +   GD E++   +  F  K
Sbjct: 108 EEACGDNERISRSDCNFGDK 127