Jatropha Genome Database
- JcCA0076441.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0076441.10 + phase: 0
(219 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31810.1 | Symbols: | acetolactate synthase small subunit, p... 175 2e-44
AT2G31810.3 | Symbols: | acetolactate synthase small subunit, p... 174 3e-44
AT5G16290.2 | Symbols: | acetolactate synthase small subunit, p... 174 5e-44
AT5G16290.1 | Symbols: | acetolactate synthase small subunit, p... 174 5e-44
AT2G31810.2 | Symbols: | acetolactate synthase small subunit, p... 132 2e-31
>AT2G31810.1 | Symbols: | acetolactate synthase small subunit,
putative | chr2:13524271-13528246 FORWARD
Length = 491
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 95/122 (77%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXX 138
R+HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLN+DKALFTIVV GT
Sbjct: 85 RKHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIE 144
Query: 139 XXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTI 198
D+SSEPQVERELML+KVNA P RAEI WLV+ FRA++VDI+EH++TI
Sbjct: 145 QLQKLVNVLKVEDISSEPQVERELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTI 204
Query: 199 EV 200
EV
Sbjct: 205 EV 206
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVSGTXXXXXXX 136
R HT+S+ V D G++N + GVFARRGYNI+SLAVG + K + T V+ T
Sbjct: 318 RSHTLSLLVNDIPGVLNIVTGVFARRGYNIQSLAVGHAETKGISRITTVIPATDESVSKL 377
Query: 137 XXXXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSV 196
DL+ P ERELMLIK+ + R ++ + IFRAK VD+S+H++
Sbjct: 378 VQQLYKLVDVHEVHDLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTI 437
Query: 197 TIEV 200
T+++
Sbjct: 438 TLQL 441
>AT2G31810.3 | Symbols: | acetolactate synthase small subunit,
putative | chr2:13524271-13528246 FORWARD
Length = 469
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 95/122 (77%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXX 138
R+HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLN+DKALFTIVV GT
Sbjct: 85 RKHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIE 144
Query: 139 XXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTI 198
D+SSEPQVERELML+KVNA P RAEI WLV+ FRA++VDI+EH++TI
Sbjct: 145 QLQKLVNVLKVEDISSEPQVERELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTI 204
Query: 199 EV 200
EV
Sbjct: 205 EV 206
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVSGTXXXXXXX 136
R HT+S+ V D G++N + GVFARRGYNI+SLAVG + K + T V+ T
Sbjct: 318 RSHTLSLLVNDIPGVLNIVTGVFARRGYNIQSLAVGHAETKGISRITTVIPATDESVSKL 377
Query: 137 XXXXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSV 196
DL+ P ERELMLIK+ + R ++ + IFRAK VD+S+H++
Sbjct: 378 VQQLYKLVDVHEVHDLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTI 437
Query: 197 TIEV 200
T++V
Sbjct: 438 TLQV 441
>AT5G16290.2 | Symbols: | acetolactate synthase small subunit,
putative | chr5:5333874-5337387 FORWARD
Length = 477
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/122 (71%), Positives = 94/122 (77%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXX 138
RRHTISVFVGDESG+INRIAGVFARRGYNIESLAVGLN+DKALFTIVV GT
Sbjct: 75 RRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVLGTDKVLQQVVE 134
Query: 139 XXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTI 198
DLS EP VERELMLIK+NADP+ R+EI WLV+IFRAKIVD SE S+TI
Sbjct: 135 QLNKLVNVIKVEDLSKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTI 194
Query: 199 EV 200
EV
Sbjct: 195 EV 196
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVSGTXXXXXXX 136
R HT+S+ V + G++N I G +RRGYNI+SLAVG + + L T V+ GT
Sbjct: 306 RSHTLSLLVANVPGVLNLITGAISRRGYNIQSLAVGPAEKEGLSRITTVIPGTDENIDKL 365
Query: 137 XXXXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSV 196
+++ P ERELMLIKV AD + R ++ + ++FRAK +D+S+H++
Sbjct: 366 VRQLQKLIDLQEIQNITHMPFAERELMLIKVAADTSARRDVLDIAQVFRAKAIDVSDHTI 425
Query: 197 TIEV 200
T+EV
Sbjct: 426 TLEV 429
>AT5G16290.1 | Symbols: | acetolactate synthase small subunit,
putative | chr5:5333874-5337387 FORWARD
Length = 477
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/122 (71%), Positives = 94/122 (77%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXX 138
RRHTISVFVGDESG+INRIAGVFARRGYNIESLAVGLN+DKALFTIVV GT
Sbjct: 75 RRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVLGTDKVLQQVVE 134
Query: 139 XXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTI 198
DLS EP VERELMLIK+NADP+ R+EI WLV+IFRAKIVD SE S+TI
Sbjct: 135 QLNKLVNVIKVEDLSKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTI 194
Query: 199 EV 200
EV
Sbjct: 195 EV 196
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVSGTXXXXXXX 136
R HT+S+ V + G++N I G +RRGYNI+SLAVG + + L T V+ GT
Sbjct: 306 RSHTLSLLVANVPGVLNLITGAISRRGYNIQSLAVGPAEKEGLSRITTVIPGTDENIDKL 365
Query: 137 XXXXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSV 196
+++ P ERELMLIKV AD + R ++ + ++FRAK +D+S+H++
Sbjct: 366 VRQLQKLIDLQEIQNITHMPFAERELMLIKVAADTSARRDVLDIAQVFRAKAIDVSDHTI 425
Query: 197 TIEV 200
T+EV
Sbjct: 426 TLEV 429
>AT2G31810.2 | Symbols: | acetolactate synthase small subunit,
putative | chr2:13524419-13528246 FORWARD
Length = 421
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 74/101 (73%)
Query: 100 VFARRGYNIESLAVGLNKDKALFTIVVSGTXXXXXXXXXXXXXXXXXXXXXDLSSEPQVE 159
VFARRGYNIESLAVGLN+DKALFTIVV GT D+SSEPQVE
Sbjct: 35 VFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQLQKLVNVLKVEDISSEPQVE 94
Query: 160 RELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHSVTIEV 200
RELML+KVNA P RAEI WLV+ FRA++VDI+EH++TIEV
Sbjct: 95 RELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTIEV 135
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 79 RRHTISVFVGDESGMINRIAGVFARRGYNIES-LAVGLNKDKAL--FTIVVSGTXXXXXX 135
R HT+S+ V D G++N + GVFARRGYNI++ LAVG + K + T V+ T
Sbjct: 247 RSHTLSLLVNDIPGVLNIVTGVFARRGYNIQAYLAVGHAETKGISRITTVIPATDESVSK 306
Query: 136 XXXXXXXXXXXXXXXDLSSEPQVERELMLIKVNADPNYRAEIKWLVEIFRAKIVDISEHS 195
DL+ P ERELMLIK+ + R ++ + IFRAK VD+S+H+
Sbjct: 307 LVQQLYKLVDVHEVHDLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHT 366
Query: 196 VTIEV 200
+T+++
Sbjct: 367 ITLQL 371