Jatropha Genome Database
- JcCA0075511.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0075511.30 - phase: 0
(179 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 288 1e-78
AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 288 1e-78
AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 281 1e-76
AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana I... 261 1e-70
AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana Ind... 211 3e-55
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 210 3e-55
AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 209 5e-55
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 209 6e-55
AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 208 1e-54
AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana I... 208 2e-54
AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana Ind... 206 5e-54
AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Ind... 206 7e-54
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 205 2e-53
AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid bind... 202 1e-52
AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 200 3e-52
AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana I... 199 1e-51
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 198 2e-51
AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 194 4e-50
AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 193 4e-50
AT5G60470.1 | Symbols: | nucleic acid binding / transcription f... 184 2e-47
AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 173 5e-44
AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 72 3e-13
AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 71 3e-13
AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 71 3e-13
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 71 5e-13
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 61 4e-10
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 60 5e-10
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 60 9e-10
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 60 1e-09
AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED TRIBUT... 57 5e-09
AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1); transcri... 54 4e-08
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 445
Score = 288 bits (737), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 127/148 (85%), Positives = 142/148 (95%), Gaps = 1/148 (0%)
Query: 18 GSNNNKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP 77
++ K+KRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICNQGFQRDQNLQMHRRRHKVP
Sbjct: 39 NTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVP 98
Query: 78 WKLLKRESPV-VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSK 136
WKLLKR++ + V+KRV+VCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHKQWVC++CSK
Sbjct: 99 WKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSK 158
Query: 137 AYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
YAVQSD+KAHLKTCGTRGHSCDCGRVF
Sbjct: 159 GYAVQSDYKAHLKTCGTRGHSCDCGRVF 186
>AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532484-25534317 FORWARD
Length = 419
Score = 288 bits (736), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 129/150 (86%), Positives = 142/150 (94%), Gaps = 1/150 (0%)
Query: 16 DGGSNNNKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK 75
+G + K+KRRPAGTPDP+AEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHK
Sbjct: 34 NGTAVTQKRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHK 93
Query: 76 VPWKLLKRES-PVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKC 134
VPWKLLKRE+ VRKRV+VCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHKQW+C++C
Sbjct: 94 VPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERC 153
Query: 135 SKAYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
SK YAVQSD+KAHLKTCGTRGHSCDCGRVF
Sbjct: 154 SKGYAVQSDYKAHLKTCGTRGHSCDCGRVF 183
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 446
Score = 281 bits (720), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 124/145 (85%), Positives = 139/145 (95%), Gaps = 1/145 (0%)
Query: 18 GSNNNKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP 77
++ K+KRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICNQGFQRDQNLQMHRRRHKVP
Sbjct: 39 NTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVP 98
Query: 78 WKLLKRESPV-VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSK 136
WKLLKR++ + V+KRV+VCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHKQWVC++CSK
Sbjct: 99 WKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSK 158
Query: 137 AYAVQSDFKAHLKTCGTRGHSCDCG 161
YAVQSD+KAHLKTCGTRGHSCDCG
Sbjct: 159 GYAVQSDYKAHLKTCGTRGHSCDCG 183
>AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana
Indeterminate(ID)-Domain 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849549-8851520 FORWARD
Length = 362
Score = 261 bits (668), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 119/134 (88%), Positives = 127/134 (94%), Gaps = 2/134 (1%)
Query: 33 DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRE--SPVVRK 90
DPDAEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR+ VRK
Sbjct: 20 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79
Query: 91 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAHLKT 150
RV+VCPEP+CLHHDPCHALGDLVGIKKHFRRKHS HKQWVC++CSK YAVQSD+KAHLKT
Sbjct: 80 RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139
Query: 151 CGTRGHSCDCGRVF 164
CG+RGHSCDCGRVF
Sbjct: 140 CGSRGHSCDCGRVF 153
>AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana
Indeterminate(ID)-Domain 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18840945-18842829 FORWARD
Length = 452
Score = 211 bits (536), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 94/145 (64%), Positives = 117/145 (80%), Gaps = 1/145 (0%)
Query: 20 NNNKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK 79
+ KKKR G PDP++EV++LSPKTLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWK
Sbjct: 31 STGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 90
Query: 80 LLKRESPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYA 139
L ++ + V+K+V+VCPE SC+HHDP ALGDL GIKKHF RKH K+W CDKCSK YA
Sbjct: 91 LRQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCDKCSKKYA 149
Query: 140 VQSDFKAHLKTCGTRGHSCDCGRVF 164
VQSD+KAH K CGT+ + CDCG +F
Sbjct: 150 VQSDWKAHSKICGTKEYKCDCGTLF 174
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26641914-26643883 REVERSE
Length = 500
Score = 210 bits (535), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 124/169 (73%), Gaps = 7/169 (4%)
Query: 2 LANNSSSSDPFSCLDGGSNN------NKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 55
L N+S+ S S G+ N KKKR G PDPDAEV++LSPKTL+ ++R+VCE
Sbjct: 5 LDNSSTVSGDASVSSTGNQNLTPKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCE 64
Query: 56 ICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVRKRVFVCPEPSCLHHDPCHALGDLVGI 115
ICN+GFQRDQNLQ+HRR H +PWKL +R + VRK+V+VCP C+HHDP ALGDL GI
Sbjct: 65 ICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGI 124
Query: 116 KKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
KKHF RKH K+W C+KCSK YAVQSD+KAH K CGT+ + CDCG +F
Sbjct: 125 KKHFCRKH-GEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLF 172
>AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 506
Score = 209 bits (533), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 115/142 (80%), Gaps = 1/142 (0%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
KKKR G PDP+AEV++LSPKTL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 41 KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 100
Query: 83 RESPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQS 142
R S VRKRV+VCPE SC+HH P ALGDL GIKKHF RKH K+W C+KC+K YAVQS
Sbjct: 101 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHG-EKKWKCEKCAKRYAVQS 159
Query: 143 DFKAHLKTCGTRGHSCDCGRVF 164
D+KAH KTCGTR + CDCG +F
Sbjct: 160 DWKAHSKTCGTREYRCDCGTIF 181
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990070-4992442 FORWARD
Length = 467
Score = 209 bits (533), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 118/142 (83%), Gaps = 1/142 (0%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
KK+R G P+PDAEV++LSPKT++ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct: 53 KKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 112
Query: 83 RESPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQS 142
+ + VR++V++CPEPSC+HHDP ALGDL GIKKH+ RKH K+W CDKCSK YAVQS
Sbjct: 113 KSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHG-EKKWKCDKCSKRYAVQS 171
Query: 143 DFKAHLKTCGTRGHSCDCGRVF 164
D+KAH KTCGT+ + CDCG +F
Sbjct: 172 DWKAHSKTCGTKEYRCDCGTIF 193
>AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-521170 REVERSE
Length = 516
Score = 208 bits (529), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 118/142 (83%), Gaps = 1/142 (0%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
KK+R G P+PDAEVV+LSPKTL+ ++R++C++CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct: 54 KKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQ 113
Query: 83 RESPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQS 142
+ + V+++V++CPEP+C+HHDP ALGDL GIKKH+ RKH K+W C+KCSK YAVQS
Sbjct: 114 KSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHG-EKKWKCEKCSKRYAVQS 172
Query: 143 DFKAHLKTCGTRGHSCDCGRVF 164
D+KAH KTCGT+ + CDCG +F
Sbjct: 173 DWKAHSKTCGTKEYRCDCGTIF 194
>AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana
Indeterminate(ID)-Domain 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544941-4547300 FORWARD
Length = 513
Score = 208 bits (529), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 118/147 (80%), Gaps = 2/147 (1%)
Query: 19 SNNNKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPW 78
S KK+R G PDP++EV++LSPKTL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PW
Sbjct: 66 SQTQKKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 125
Query: 79 KLLKRES-PVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKA 137
KL +R + V+RK+V+VCPE SC+HHDP ALGDL GIKKHF RKH K+W CDKCSK
Sbjct: 126 KLKQRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGE-KKWKCDKCSKK 184
Query: 138 YAVQSDFKAHLKTCGTRGHSCDCGRVF 164
YAVQSD KAH KTCGT+ + CDCG +F
Sbjct: 185 YAVQSDCKAHSKTCGTKEYRCDCGTLF 211
>AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana
Indeterminate(ID)-Domain 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505523-509154 FORWARD
Length = 602
Score = 206 bits (525), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 117/142 (82%), Gaps = 1/142 (0%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
KKKR TP+ DAEV++LSPKTL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct: 52 KKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 111
Query: 83 RESPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQS 142
+ + V+++V++CPEPSC+HHDP ALGDL GIKKH+ RKH K+W CDKCSK YAVQS
Sbjct: 112 KSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHG-EKKWKCDKCSKRYAVQS 170
Query: 143 DFKAHLKTCGTRGHSCDCGRVF 164
D+KAH KTCGT+ + CDCG +F
Sbjct: 171 DWKAHSKTCGTKEYRCDCGTLF 192
>AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana
Indeterminate(ID)-Domain 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20560406-20562625 REVERSE
Length = 455
Score = 206 bits (524), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 92/143 (64%), Positives = 117/143 (81%), Gaps = 2/143 (1%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
K+KR G PDP+AEV++LSPKTL+ ++R++CE+CN+GFQRDQNLQ+H+R H +PWKL +
Sbjct: 63 KRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQ 122
Query: 83 RESP-VVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQ 141
R + VVRK+V+VCPEP C+HH P ALGDL GIKKHF RKH K+W C+KCSK YAVQ
Sbjct: 123 RSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHG-EKKWKCEKCSKKYAVQ 181
Query: 142 SDFKAHLKTCGTRGHSCDCGRVF 164
SD+KAH KTCGT+ + CDCG +F
Sbjct: 182 SDWKAHAKTCGTKEYKCDCGTLF 204
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745849-748678 FORWARD
Length = 503
Score = 205 bits (521), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 119/147 (80%), Gaps = 2/147 (1%)
Query: 19 SNNNKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPW 78
S++ KKKR GTPDPDA+V++LSP TL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PW
Sbjct: 49 SSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 108
Query: 79 KLLKR-ESPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKA 137
KL +R + V++K+V++CP +C+HHD ALGDL GIKKH+ RKH K+W C+KCSK
Sbjct: 109 KLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHG-EKKWKCEKCSKK 167
Query: 138 YAVQSDFKAHLKTCGTRGHSCDCGRVF 164
YAVQSD+KAH KTCGTR + CDCG +F
Sbjct: 168 YAVQSDWKAHAKTCGTREYKCDCGTLF 194
>AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17773091-17775513 FORWARD
Length = 466
Score = 202 bits (513), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 113/142 (79%), Gaps = 1/142 (0%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
KKKR G PDP+AEV++LSP TL+ ++R++CE+C +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 37 KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQ 96
Query: 83 RESPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQS 142
R S VRKRV+VCPE +C+HH ALGDL GIKKHF RKH K+W C+KC+K YAVQS
Sbjct: 97 RTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHG-EKKWTCEKCAKRYAVQS 155
Query: 143 DFKAHLKTCGTRGHSCDCGRVF 164
D+KAH KTCGTR + CDCG +F
Sbjct: 156 DWKAHSKTCGTREYRCDCGTIF 177
>AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 504
Score = 200 bits (509), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 114/142 (80%), Gaps = 3/142 (2%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
KKKR G +P+AEV++LSPKTL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 41 KKKRNLPG--NPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 98
Query: 83 RESPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQS 142
R S VRKRV+VCPE SC+HH P ALGDL GIKKHF RKH K+W C+KC+K YAVQS
Sbjct: 99 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHG-EKKWKCEKCAKRYAVQS 157
Query: 143 DFKAHLKTCGTRGHSCDCGRVF 164
D+KAH KTCGTR + CDCG +F
Sbjct: 158 DWKAHSKTCGTREYRCDCGTIF 179
>AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana
Indeterminate(ID)-Domain 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 199 bits (505), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 113/143 (79%), Gaps = 2/143 (1%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
KKKR G PDPDAEV++LSPKTLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL +
Sbjct: 53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 83 RES-PVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQ 141
+ + +K+V+VCPE +C HH P ALGDL GIKKHF RKH K+W C+KCSK YAVQ
Sbjct: 113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKFYAVQ 171
Query: 142 SDFKAHLKTCGTRGHSCDCGRVF 164
SD+KAH K CGTR + CDCG +F
Sbjct: 172 SDWKAHTKICGTRDYRCDCGTLF 194
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16596850-16598550 REVERSE
Length = 446
Score = 198 bits (503), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 114/143 (79%), Gaps = 2/143 (1%)
Query: 23 KKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 82
K+KR G PDPDAEV++LSP +L+ ++R++CE+CN+GF+RDQNLQ+HRR H +PWKL +
Sbjct: 39 KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98
Query: 83 RES-PVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQ 141
R + V+K+V++CPE +C+HHDP ALGDL GIKKHF RKH K+W CDKCSK YAV
Sbjct: 99 RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHG-EKKWKCDKCSKKYAVM 157
Query: 142 SDFKAHLKTCGTRGHSCDCGRVF 164
SD+KAH K CGT+ + CDCG +F
Sbjct: 158 SDWKAHSKICGTKEYRCDCGTLF 180
>AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532843-25534317 FORWARD
Length = 333
Score = 194 bits (492), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 85/97 (87%), Positives = 93/97 (95%), Gaps = 1/97 (1%)
Query: 69 MHRRRHKVPWKLLKRES-PVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK 127
MHRRRHKVPWKLLKRE+ VRKRV+VCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHK
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 128 QWVCDKCSKAYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
QW+C++CSK YAVQSD+KAHLKTCGTRGHSCDCGRVF
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVF 97
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:433232-434917 FORWARD
Length = 356
Score = 193 bits (491), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 94/97 (96%), Gaps = 1/97 (1%)
Query: 69 MHRRRHKVPWKLLKRESPV-VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK 127
MHRRRHKVPWKLLKR++ + V+KRV+VCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHK
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 128 QWVCDKCSKAYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
QWVC++CSK YAVQSD+KAHLKTCGTRGHSCDCGRVF
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVF 97
>AT5G60470.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr5:24320614-24322790
FORWARD
Length = 450
Score = 184 bits (468), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 106/132 (80%), Gaps = 2/132 (1%)
Query: 34 PDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESP-VVRKRV 92
P+AEV+SLSPK+L+ ++R+ CEICN+GFQR+QNLQ+H+R H +PWKL ++ + V+K+V
Sbjct: 46 PNAEVISLSPKSLMATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKV 105
Query: 93 FVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAHLKTCG 152
++CPE SC+HHDP ALGDL GIKKHF RKH K+W CDKCSK YAV SD+KAH K CG
Sbjct: 106 YICPEKSCVHHDPARALGDLTGIKKHFSRKHG-EKKWKCDKCSKKYAVISDWKAHNKICG 164
Query: 153 TRGHSCDCGRVF 164
+R CDCG +F
Sbjct: 165 SREFRCDCGTLF 176
>AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-520619 REVERSE
Length = 439
Score = 173 bits (438), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Query: 47 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVRKRVFVCPEPSCLHHDPC 106
+ ++R++C++CN+GFQR+QNLQ+HRR H +PWKL ++ + V+++V++CPEP+C+HHDP
Sbjct: 1 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 60
Query: 107 HALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
ALGDL GIKKH+ RKH K+W C+KCSK YAVQSD+KAH KTCGT+ + CDCG +F
Sbjct: 61 RALGDLTGIKKHYYRKHG-EKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIF 117
>AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551449-12552501
FORWARD
Length = 350
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 32 PDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL------KRES 85
P E++ L + +L + C IC +GF+RD NL+MH R H +K +ES
Sbjct: 75 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 134
Query: 86 -----PVVRKRVFVCPEPSC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKC-SK 136
P++ KR + CP C H L ++ +K H++R H + K + C +C +K
Sbjct: 135 VPGSEPMLIKR-YSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD-KSFTCSRCHTK 192
Query: 137 AYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
++V +D K H K CG C CG F
Sbjct: 193 KFSVIADLKTHEKHCGKNKWLCSCGTTF 220
>AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 32 PDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL------KRES 85
P E++ L + +L + C IC +GF+RD NL+MH R H +K +ES
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 86 -----PVVRKRVFVCPEPSC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKC-SK 136
P++ KR + CP C H L ++ +K H++R H + K + C +C +K
Sbjct: 284 VPGSEPMLIKR-YSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD-KSFTCSRCHTK 341
Query: 137 AYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
++V +D K H K CG C CG F
Sbjct: 342 KFSVIADLKTHEKHCGKNKWLCSCGTTF 369
>AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 32 PDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL------KRES 85
P E++ L + +L + C IC +GF+RD NL+MH R H +K +ES
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 86 -----PVVRKRVFVCPEPSC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKC-SK 136
P++ KR + CP C H L ++ +K H++R H + K + C +C +K
Sbjct: 284 VPGSEPMLIKR-YSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD-KSFTCSRCHTK 341
Query: 137 AYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
++V +D K H K CG C CG F
Sbjct: 342 KFSVIADLKTHEKHCGKNKWLCSCGTTF 369
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653541-7654662 REVERSE
Length = 373
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 21 NNKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKL 80
N KK + + +++ L LL + C+IC +GF+RD NL+MH R H +K
Sbjct: 186 NPKKDKHRSKPSSGSYDILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYK- 244
Query: 81 LKRESPV------------VRKRVFVCPEPSC---LHHDPCHALGDLVGIKKHFRRKHSN 125
RE+ + ++K + CP+ C H+ L ++ K H++R H
Sbjct: 245 -TREALISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCP 303
Query: 126 HKQWVCDKCS-KAYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
K ++C +CS K ++V SD + H K CG C CG F
Sbjct: 304 -KMYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKF 342
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18989925-18992034 REVERSE
Length = 337
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 44 KTLLESDRYVCEICNQGFQRDQNLQMHRRRH-----KVPWKLLKRESPVVRKRVFVCPEP 98
+ L+ ++ C +C + F R N+QMH H K P L + + + C P
Sbjct: 170 QILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAP 229
Query: 99 SC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAHLKTCGTRG 155
C + H L D ++ H++RKH + K + C C KA+AV+ D++ H K CG
Sbjct: 230 GCKNNIDHPRAKPLKDFRTLQTHYKRKHGS-KPFACRMCGKAFAVKGDWRTHEKNCGKLW 288
Query: 156 HSCDCGRVF 164
+ C CG F
Sbjct: 289 Y-CSCGSDF 296
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21370936-21373121 FORWARD
Length = 383
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 44 KTLLESDRYVCEICNQGFQRDQNLQMHRRRH-----KVPWKLLKRESPVVRKRVFVCPEP 98
+ L+ ++ C +C + F R N+QMH H K P L + + + C P
Sbjct: 209 QILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAP 268
Query: 99 SC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAHLKTCGTRG 155
C + H L D ++ H++RKH K ++C KC KA+AV+ D++ H K CG
Sbjct: 269 GCRNNIDHPRAKPLKDFRTLQTHYKRKHGI-KPFMCRKCGKAFAVRGDWRTHEKNCGKLW 327
Query: 156 HSCDCGRVF 164
+ C CG F
Sbjct: 328 Y-CICGSDF 335
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313759-7315792 REVERSE
Length = 412
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 44 KTLLESDRYVCEICNQGFQRDQNLQMHRRRH-----KVPWKLLKRESPVVRKRVFVCPEP 98
+ L+ ++ C +C + F R N+QMH H K P L + + K C P
Sbjct: 248 QILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAP 307
Query: 99 SC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAHLKTCGTRG 155
C + H L D ++ H++RKH + + C +C KA+AV+ D++ H K CG
Sbjct: 308 GCKNNIDHPRARPLKDFRTLQTHYKRKHGV-RPFACRRCGKAFAVKGDWRTHEKNCGKLW 366
Query: 156 HSCDCGRVF 164
+ C CG F
Sbjct: 367 Y-CSCGSDF 374
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610680-2613180 REVERSE
Length = 337
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 51 RYVCEICNQGFQRDQNLQMHRRRHKVPW-------KLLKRESPVVRKRVFVCPE--PSCL 101
++ C IC++ F R N+QMH H + K + + ++R + C E + +
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNI 238
Query: 102 HHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAHLKTCGTRGHSCDCG 161
+H L D ++ H++RKH + K + C KC KA AV+ D++ H K CG + C CG
Sbjct: 239 NHPRSKPLKDFRTLQTHYKRKHGS-KPFSCGKCGKALAVKGDWRTHEKNCGKLWY-CTCG 296
Query: 162 RVF 164
F
Sbjct: 297 SDF 299
>AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED
TRIBUTARIES 5); transcription factor |
chr1:4550366-4551527 REVERSE
Length = 302
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 15 LDGGSNNNKKKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRH 74
L GG+N R P + + P ++ C +CN+ F R N+QMH H
Sbjct: 70 LSGGNNQEGLTARQGQYWIPSLSQILVGPT------QFSCSVCNKTFNRFNNMQMHMWGH 123
Query: 75 -----KVPWKL--LKRESPVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSN 125
K P L K S ++R + C E + + H L D ++ H++RKH
Sbjct: 124 GSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGA 183
Query: 126 HKQWVCDKCSKAYAVQSDFKAHLKTCGTRGHSCDCGRVF 164
KC K +AV+ D++ H K CG + C CG F
Sbjct: 184 KPFRCRKKCEKTFAVRGDWRTHEKNCG-KLWFCVCGSDF 221
>AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1);
transcription factor | chr1:12763953-12765489 FORWARD
Length = 303
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 36 AEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK----LLKRESPVVRKR 91
A + + L+ + C +C + F R NLQMH H ++ LK P
Sbjct: 129 AYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLG 188
Query: 92 V--FVCPEP--SCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKAYAVQSDFKAH 147
+ + C E + + H L D ++ H++RKH HK + C C K AV+ D++ H
Sbjct: 189 IPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHG-HKPFSCRLCGKLLAVKGDWRTH 247
Query: 148 LKTCGTRGHSCDCGRVF 164
K CG R C CG F
Sbjct: 248 EKNCGKRW-VCVCGSDF 263