Jatropha Genome Database

JcCA0075511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075511.10 + phase: 0 /TE
         (1209 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   240   5e-63
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    99   2e-20

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  240 bits (612), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 128/280 (45%), Positives = 175/280 (62%), Gaps = 5/280 (1%)

Query: 935  ISPSYTSFVSNVLKIPEPISFHQANKDLNWVQAMQKELVALEENKTWVLFDLPKGKKPIG 994
            +SP Y SF+  + K  EP ++++A + L W  AM  E+ A+E   TW +  LP  KKPIG
Sbjct: 69   VSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIG 128

Query: 995  SKWVYRVKYKLDGGVDRYKAHLVAKGYTQLLGLDYTETFSPVAKLVTVRIFLAIVASKGW 1054
             KWVY++KY  DG ++RYKA LVAKGYTQ  G+D+ ETFSPV KL +V++ LAI A   +
Sbjct: 129  CKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNF 188

Query: 1055 SLHQLDINNAYLHNFCTEDIYMIPPAGYTKA-----IPRXVCKLYRSLYGLKQADRQWNR 1109
            +LHQLDI+NA+L+    E+IYM  P GY         P  VC L +S+YGLKQA RQW  
Sbjct: 189  TLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFL 248

Query: 1110 ELTKHLGEYGFQQSQNGQCLFTKGTKSDFLALLLYVDDILITGLYEKLIINVKQFLHDKF 1169
            + +  L  +GF QS +    F K T + FL +L+YVDDI+I    +  +  +K  L   F
Sbjct: 249  KFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCF 308

Query: 1170 TNKNIGYAKFFLGLEIAISETAICVTQRKYIMDLVXEASI 1209
              +++G  K+FLGLEIA S   I + QRKY +DL+ E  +
Sbjct: 309  KLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGL 348


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
            chrM:228573-229085 REVERSE
          Length = 170

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 1/114 (0%)

Query: 935  ISPSYTSFVSNVLKIPEPISFHQANKDLNWVQAMQKELVALEENKTWVLFDLPKGKKPIG 994
            ++P Y+  ++  +K  EP S   A KD  W QAMQ+EL AL  NKTW+L   P  +  +G
Sbjct: 12   LNPKYSLTITTTIK-KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILG 70

Query: 995  SKWVYRVKYKLDGGVDRYKAHLVAKGYTQLLGLDYTETFSPVAKLVTVRIFLAI 1048
             KWV++ K   DG +DR KA LVAKG+ Q  G+ + ET+SPV +  T+R  L +
Sbjct: 71   CKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124