Jatropha Genome Database

JcCA0075411.20

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075411.20 + phase: 0 
         (92 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G28857.1 | Symbols:  | transcription regulator | chr3:1085578...    77   2e-15
AT5G39860.1 | Symbols: PRE1 | PRE1 (PACLOBUTRAZOL RESISTANCE1); ...    77   3e-15
AT3G47710.1 | Symbols:  | bHLH family protein | chr3:17590729-17...    75   1e-14
AT1G26945.1 | Symbols: KDR | KDR (KIDARI); transcription regulat...    71   1e-13
AT1G74500.1 | Symbols:  | bHLH family protein | chr1:27998298-27...    69   7e-13
AT5G15160.1 | Symbols:  | bHLH family protein | chr5:4921487-492...    64   2e-11

>AT3G28857.1 | Symbols:  | transcription regulator |
          chr3:10855781-10856313 REVERSE
          Length = 92

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 63/79 (79%), Gaps = 1/79 (1%)

Query: 13 KITKNEIIDLILKLQALLPHINQRQDS-RVSASKILKETCSYIGKLQREVDDLSEKLSQM 71
          +I+ +++IDL+ KL+  LP I++R+ S +VSASK+L+ETC+YI KL REVD+LS++LSQ+
Sbjct: 14 RISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLHREVDNLSDRLSQL 73

Query: 72 LDSMDISNVDVESLISILL 90
          LDS+D  + +   + S+L+
Sbjct: 74 LDSVDEDSPEAAVIRSLLM 92


>AT5G39860.1 | Symbols: PRE1 | PRE1 (PACLOBUTRAZOL RESISTANCE1);
          DNA binding / transcription factor |
          chr5:15957689-15958303 FORWARD
          Length = 92

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 61/79 (77%), Gaps = 1/79 (1%)

Query: 13 KITKNEIIDLILKLQALLPHINQRQDS-RVSASKILKETCSYIGKLQREVDDLSEKLSQM 71
          +I+ N++IDL+ KL+ +LP I QR+ S + SASK+L+ETC+YI  L REVD+LSE+LSQ+
Sbjct: 14 RISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLNREVDNLSERLSQL 73

Query: 72 LDSMDISNVDVESLISILL 90
          L+S+D  + +   + S+L+
Sbjct: 74 LESVDEDSPEAAVIRSLLM 92


>AT3G47710.1 | Symbols:  | bHLH family protein |
          chr3:17590729-17591455 FORWARD
          Length = 92

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 57/80 (71%), Gaps = 4/80 (5%)

Query: 14 ITKNEIIDLILKLQALLPHI-NQRQDSRVSASKILKETCSYIGKLQREVDDLSEKLSQML 72
          IT  +I DL+L+L  LLP + N R+  +VSAS++L+ETCSYI  L +EVDDLSE+LSQ+L
Sbjct: 16 ITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLL 75

Query: 73 DSMDISNVDVESLISILLQQ 92
          +S D +     +LI  LL Q
Sbjct: 76 ESTDSAQA---ALIRSLLMQ 92


>AT1G26945.1 | Symbols: KDR | KDR (KIDARI); transcription
          regulator | chr1:9351571-9352474 FORWARD
          Length = 94

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 55/73 (75%)

Query: 17 NEIIDLILKLQALLPHINQRQDSRVSASKILKETCSYIGKLQREVDDLSEKLSQMLDSMD 76
          ++I DL+ KLQ L+P + +R+  +VSASK+L+ETC+YI  L REVDDLS++LS++L S D
Sbjct: 20 DQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNLHREVDDLSDRLSELLASTD 79

Query: 77 ISNVDVESLISIL 89
           ++ +   + S+L
Sbjct: 80 DNSAEAAIIRSLL 92


>AT1G74500.1 | Symbols:  | bHLH family protein |
          chr1:27998298-27998668 REVERSE
          Length = 93

 Score = 68.6 bits (166), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 59/80 (73%), Gaps = 4/80 (5%)

Query: 14 ITKNEIIDLILKLQALLPHI-NQRQDSRVSASKILKETCSYIGKLQREVDDLSEKLSQML 72
          I++++I DLI+KLQ LLP + + R+  +VSA+++L++TC+YI  L REVDDLSE+LS++L
Sbjct: 17 ISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELL 76

Query: 73 DSMDISNVDVESLISILLQQ 92
           + D +     +LI  LL Q
Sbjct: 77 ANSDTAQA---ALIRSLLTQ 93


>AT5G15160.1 | Symbols:  | bHLH family protein |
          chr5:4921487-4922553 REVERSE
          Length = 94

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 48/61 (78%), Gaps = 1/61 (1%)

Query: 17 NEIIDLILKLQALLPHINQ-RQDSRVSASKILKETCSYIGKLQREVDDLSEKLSQMLDSM 75
          ++I DLI KL+  +P I Q R+ + VSASK+L+ETC+YI  L +E DDLS++L+Q+L+S+
Sbjct: 19 DQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLNKEADDLSDRLTQLLESI 78

Query: 76 D 76
          D
Sbjct: 79 D 79