Jatropha Genome Database

JcCA0075411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075411.10 + phase: 0 
         (679 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47700.1 | Symbols: MAG2 | MAG2 (maigo2) | chr3:17583773-1758...   867   0.0  
AT1G08400.1 | Symbols:  | chromosome structural maintenance prot...   427   e-119

>AT3G47700.1 | Symbols: MAG2 | MAG2 (maigo2) |
           chr3:17583773-17586578 REVERSE
          Length = 795

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/679 (62%), Positives = 535/679 (78%), Gaps = 8/679 (1%)

Query: 1   MSQLLSAFSIPKTALKLDNLVGDIEDAVSSAMSKKLRKPSSTQNSEEMRLLAIETLRKTE 60
           ++Q+ S  +  +TALKLD LVGDIEDAV S+++K LR  S +   EE+RL AI+TL+ TE
Sbjct: 122 VAQVESVRAYAETALKLDTLVGDIEDAVMSSLNKNLRT-SRSSGFEEVRLHAIKTLKTTE 180

Query: 61  SFLTSITKAHPQWTHLVLAVDHRVDRALAILRPQAIADHRALLTSLGWPPPLSTLTSSNL 120
             L+S+ K HP+W  LV AVDHRVDRALA++RPQAIAD+RALL+SL WPP LSTLTS++L
Sbjct: 181 EILSSVAKRHPRWARLVSAVDHRVDRALAMMRPQAIADYRALLSSLRWPPQLSTLTSASL 240

Query: 121 DTGKSTEVPSPLFTMQGDLKNQYCENFLALCHLQELQRRRKSRQLEGHNTE-VALHQPLW 179
           D+ KS  V +PLF M+G LK+QYC +F ALC LQ LQ +RKSRQL  H  E V  HQPLW
Sbjct: 241 DS-KSENVQNPLFNMEGSLKSQYCGSFHALCSLQGLQLQRKSRQLGIHKGENVLFHQPLW 299

Query: 180 AIEELVNPISVACQRHFSKWINKLEFIFALVYKITSDYVDTMDELLQPLVDEARLVGYSC 239
           AIEELVNP++VA QRHF+KW  K EFIFALVYKIT DYVD+MDELLQPLVDEA+L GYSC
Sbjct: 300 AIEELVNPLTVASQRHFTKWSEKPEFIFALVYKITRDYVDSMDELLQPLVDEAKLAGYSC 359

Query: 240 REEWISAMVTSLSTYLAKEVFTIYVGQLDEESVAGVQSQG-ISWLHLIDLMIAFDKRIQS 298
           REEW+SAMV+SLS YL KE+F IYVGQLDE +   ++S+  +SWLHLIDLMI+FDKR+QS
Sbjct: 360 REEWVSAMVSSLSLYLVKEIFPIYVGQLDEANETDLRSEAKVSWLHLIDLMISFDKRVQS 419

Query: 299 LMSHSGIMASLQEDENLQKISSLSIFCDRPDWLDLWAEIELSDIVEKLKPEVDDDRNWTM 358
           L+S SGI+ SLQED NL +ISSLS+FCDRPDWLDLWAEIEL + + K K E+D+DRNWT 
Sbjct: 420 LVSQSGIL-SLQEDGNLLRISSLSVFCDRPDWLDLWAEIELDERLVKFKEEIDNDRNWTA 478

Query: 359 KIEGTALLSGPENYKSPVVSVAFLRRISLLVDRCRSLPTISLRSRFLRLAGAPVIRRFLD 418
           K++   L+S    Y+ P++S  FL+ +S +++R +S+P + LR+RFLRLA +P I +FLD
Sbjct: 479 KVQDE-LISSSNVYRPPIISSIFLQHLSSIIERSKSVPALYLRARFLRLAASPTIHKFLD 537

Query: 419 FALLRCQEAEGLTALTDDDALIKVANSINAARYFESVLKEWCEDIFFLEMGFDHGDQLGI 478
             LLRCQ+A+GLTALT+++ LIKV+NSINA  Y ESVL+EW ED+FFLEMG    D   +
Sbjct: 538 CLLLRCQDADGLTALTENNDLIKVSNSINAGHYIESVLEEWSEDVFFLEMGTGQHDPQEV 597

Query: 479 SITNNEAREEPVSGIFDEEIRKLEEFRKEWVEKISVVILRGFDARCRDYVKNRRQWQEKG 538
               N    EP  GIF EE  KLE+FR EW+ K+SVVILRGFDAR R+Y+KNR+QWQEK 
Sbjct: 598 PGLENFT--EPSEGIFGEEFEKLEKFRLEWINKLSVVILRGFDARIREYIKNRKQWQEKK 655

Query: 539 EEGWTVSKNLVGALDHLQGKMAIMEENLNAMDFVGVWRSLAAGVDRLLFNGVLMSNVKFH 598
           ++ WTVS+ LVGALD+LQGK +I+EENLN  DF  +WR+LA+ +D+L FN +LM+NVKF 
Sbjct: 656 DKEWTVSRALVGALDYLQGKTSIIEENLNKADFTAMWRTLASEIDKLFFNSILMANVKFT 715

Query: 599 DCGIERFNNDMEVLFGVFGAWCLRPEGFFPKVSDGMKLLKMGEEQLRDNLAGGEKWLKEN 658
           + G+ER   DMEVL+GVF  WC+RPEGFFPK+S+G+ LLKM E+Q++D L+ G+KWL+EN
Sbjct: 716 NDGVERLKVDMEVLYGVFRTWCVRPEGFFPKLSEGLTLLKMEEKQVKDGLSRGDKWLREN 775

Query: 659 GIRNLGAAEAEKIINSRVF 677
            IR L  AEA+K+  SRVF
Sbjct: 776 RIRYLSEAEAKKVAKSRVF 794


>AT1G08400.1 | Symbols:  | chromosome structural maintenance
           protein-related | chr1:2643348-2646005 REVERSE
          Length = 804

 Score =  427 bits (1097), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/688 (37%), Positives = 377/688 (54%), Gaps = 40/688 (5%)

Query: 13  TALKLDNLVGDIEDAVSSAMSKKLRKPSSTQN---SEEMRLLAIETLRKTESFLTSITKA 69
           TALKL++LVGD+ED+V   +SK  RK S+ Q+    +E    AI+T+ + E  L  +T+ 
Sbjct: 130 TALKLESLVGDLEDSVFHPISK--RKGSTLQDLALKQERFSHAIKTMNEIEEILGDVTRH 187

Query: 70  HPQWTHLVLAVDHRVDRALAILRPQAIADHRALLTSLGWPPPLSTLTSSNLDTGKSTEVP 129
           H +W  LV +VD RVD++L++LRPQ IADHRA L+SLGWPP L+T   S ++ G+   +P
Sbjct: 188 HSRWRRLVDSVDSRVDKSLSVLRPQIIADHRAFLSSLGWPPKLAT---SKVEHGEVDSIP 244

Query: 130 SPLFTMQGDLKNQYCENFLALCHLQELQRRRKSRQLEGHNTEVALHQPLWAIEELVNPIS 189
           +PL  MQGD K  Y ++FL LC LQ+   +++ R+      E   +  LWA +ELV P++
Sbjct: 245 NPLLLMQGDKKESYSQSFLLLCGLQQHNTQKEKRKKLNMTKETD-NDGLWATDELVKPVA 303

Query: 190 VACQRHFSKWINKLEFIFALVYKITSDYVDTMDELLQPLVDEARLVGYSCREEWISAMVT 249
              + HF KW  + EFIF LVYK+T D+ D +D+ LQPL+D A LV  S +E W+SAMV 
Sbjct: 304 SRMEYHFLKWAEQPEFIFELVYKVTRDFADGVDDFLQPLIDRAMLVSCSAKEAWVSAMVQ 363

Query: 250 SLSTYLAKEVFTIYVGQLDEESVAGVQSQGI-SWLHLIDLMIAFDKRIQSLMSHSGIMAS 308
            LS +L K+VF    G +D      ++S+GI SW HL+D M+ FDKR+QS ++    ++ 
Sbjct: 364 MLSGFLEKKVFP---GLIDMYKEKHMKSEGISSWFHLVDQMVTFDKRMQSFVNTDTCLSY 420

Query: 309 LQEDENL-QKISSLSIFCDRPDWLDLWAEIELSDIVEKLKPEVDDDRNWTMKIEGTAL-- 365
                   Q IS + +FC +P+WL  W +IEL D   K K ++ +++ W +  E T L  
Sbjct: 421 EGSSTAFSQGISVMGLFCKKPEWLKTWGKIELKDAYRKSKEDIKNEKAWVIDSERTRLGN 480

Query: 366 ----------LSGPENYKSPVVSVAFLRRISLLVDRCRSLPTISLRSRFLRLAGAPVIRR 415
                     LS  E+YK+P+V+ +FL R   L+D   SLP I  R +F+R      +  
Sbjct: 481 ESNSQSAKYVLSTREDYKAPLVADSFLNRTWRLIDHGLSLPAILPRIQFIRATATRFLWC 540

Query: 416 FLDFALLRCQEAEGLTALTDDDALIKVANSINAARYFESVLKEWCEDIFFLEMGFDHGDQ 475
                LL  ++ +       +D LI+    +NAARY ES L+EW +D+ F+EM       
Sbjct: 541 IFKILLLEFKKTDLSHYGLSEDTLIQACGPVNAARYLESKLREWSDDLVFVEMW-----A 595

Query: 476 LGISITNNEAREEPVSG-IFDEEIRKLEEFRKEWVEKISVVILRGFDARCRDYVKNRR-Q 533
              S+  +   E    G  F EE++ L E    W+ +I  V L  FD  C D+  N    
Sbjct: 596 AETSVKVDRKPEVSCQGCFFGEELKSLVELETNWLMEIITVFLHQFDNLCSDHFHNNAVS 655

Query: 534 WQE---KGEEGWTVSKNLVGALDHLQGKMAIMEENLNAMDFVGVWRSLAAGVDRLLFNGV 590
           W E         TVS+ +  ALD+L+  + ++  N+N  DF+ +WR+LA G+D  +    
Sbjct: 656 WDEDVITSSSNLTVSQGVAEALDNLRRHLCVLHLNMNPKDFLDLWRNLAEGLDHYVSRKF 715

Query: 591 LMSNVKFHDCGIERFNNDMEVLFGVFGAWCLRPEGFFPKVSDGMKLLKMGEEQ---LRDN 647
                       +RF  D E L  V   +C+RP  FFP+V + ++LL+M EE+   LR  
Sbjct: 716 FSGEPVLRRQKFDRFEVDAEALLTVLKPYCVRPGAFFPRVREILRLLRMHEEEKARLRGA 775

Query: 648 LA-GGEKWLKENGIRNLGAAEAEKIINS 674
           L+  G   LK  GI NL     E+   S
Sbjct: 776 LSRSGNTCLKLFGISNLSPQLVEQFCRS 803