Jatropha Genome Database

JcCA0075381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075381.10 + phase: 0 
         (359 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | HPT1 (HOMOGENTI...   327   8e-90
AT3G11945.1 | Symbols: ATHST | homogentisate farnesyltransferase...   123   1e-28
AT3G11945.2 | Symbols: ATHST | homogentisate farnesyltransferase...   123   2e-28
AT3G51820.1 | Symbols: ATG4, G4, CHLG | G4; chlorophyll syntheta...    62   8e-10

>AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | HPT1
           (HOMOGENTISATE PHYTYLTRANSFERASE 1); homogentisate
           phytyltransferase/ prenyltransferase |
           chr2:8207491-8210047 FORWARD
          Length = 393

 Score =  327 bits (838), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 163/321 (50%), Positives = 215/321 (66%), Gaps = 2/321 (0%)

Query: 39  NDYPSNPKDGDIWSSFKWSSIHHHFNPLYQFSRPHXXXXXXXXXXXXXLLPVETITELSP 98
           N     P+  D  S+ K  S     +  Y+FSRPH              L VE ++++SP
Sbjct: 75  NATAGQPEAFD--SNSKQKSFRDSLDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISP 132

Query: 99  TFFMGLLKALVPSVLMNIYVVGLNQLFDIEIDKVNKPYLPLASGNFSKEIGITIVSISLF 158
             F G+L+A+V +++MNIY+VGLNQL D+EIDKVNKPYLPLASG +S   GI IV+    
Sbjct: 133 LLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSI 192

Query: 159 MSLGMGIMFESPPVVAALLISFVLGSVYSVELPFMRWKKQAFLAATCILIVRAIVVQLAF 218
           MS  +G +  S P+  AL +SF+LG+ YS+ LP +RWK+ A +AA CIL VRAI+VQ+AF
Sbjct: 193 MSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAF 252

Query: 219 FAHMQKFVLGKPIVITKSLVFAVAFMCFFSAVIALFKDIPDVDGDRDFGIRSFSVSLGQE 278
           + H+Q  V G+PI+ T+ L+FA AFM FFS VIALFKDIPD++GD+ FGIRSFSV+LGQ+
Sbjct: 253 YLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQK 312

Query: 279 RVFWLCVNMXXXXXXXXXXXXXSCSLGPSKLITMLGHCTLALVLWMQAQSVDLSSNNSIT 338
           RVFW CV +             +     SK+I+++GH  LA  LW +A+SVDLSS   IT
Sbjct: 313 RVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEIT 372

Query: 339 CFYMFIWKLFYAEYFLIPFVR 359
             YMFIWKLFYAEY L+PF++
Sbjct: 373 SCYMFIWKLFYAEYLLLPFLK 393


>AT3G11945.1 | Symbols: ATHST | homogentisate farnesyltransferase/
           homogentisate geranylgeranyltransferase/ homogentisate
           solanesyltransferase | chr3:3780041-3782880 REVERSE
          Length = 386

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 14/302 (4%)

Query: 64  NPLYQFSRPHXXXXXXXXXXXXXLLP-VETITELSPTFFMGLLKALVPSVLMNIYVVGLN 122
           N  ++F RPH                 +E    +  +  +  L  L+  +  N Y+VG+N
Sbjct: 92  NACWRFLRPHTIRGTALGSTALVTRALIENTHLIKWSLVLKALSGLLALICGNGYIVGIN 151

Query: 123 QLFDIEIDKVNKPYLPLASGNFSKEIGITIV---SISLFMSLGMGIMFESPPVVAALL-I 178
           Q++DI IDKVNKPYLP+A+G+ S +    +V   +I+  + +G    F   P + +L  +
Sbjct: 152 QIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLLVVG----FNFGPFITSLYSL 207

Query: 179 SFVLGSVYSVELPFMRWKKQAFLAATCILIVRAIVVQLAFFAHMQKFVLGKPIVITKSLV 238
              LG++YSV  P +R K+    A   I  VR  ++    + H  +  LG P   +  + 
Sbjct: 208 GLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY-HATRAALGLPFQWSAPVA 264

Query: 239 FAVAFMCFFSAVIALFKDIPDVDGDRDFGIRSFSVSLGQERVFWLCVNMXXXXXXXXXXX 298
           F  +F+  F+ VIA+ KD+PDV+GDR F I + +  LG   + +L   +           
Sbjct: 265 FITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSAISL 324

Query: 299 XXSCSLGPSKLITMLGHCTLALVLWMQAQSVDLS--SNNSITCFYMFIWKLFYAEYFLIP 356
                      + +  H  LA  L  Q   ++ +  +  +I+ +Y FIW LFYAEY L P
Sbjct: 325 AFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKEAISGYYRFIWNLFYAEYLLFP 384

Query: 357 FV 358
           F+
Sbjct: 385 FL 386


>AT3G11945.2 | Symbols: ATHST | homogentisate farnesyltransferase/
           homogentisate geranylgeranyltransferase/ homogentisate
           solanesyltransferase | chr3:3780041-3782880 REVERSE
          Length = 393

 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 14/302 (4%)

Query: 64  NPLYQFSRPHXXXXXXXXXXXXXLLP-VETITELSPTFFMGLLKALVPSVLMNIYVVGLN 122
           N  ++F RPH                 +E    +  +  +  L  L+  +  N Y+VG+N
Sbjct: 99  NACWRFLRPHTIRGTALGSTALVTRALIENTHLIKWSLVLKALSGLLALICGNGYIVGIN 158

Query: 123 QLFDIEIDKVNKPYLPLASGNFSKEIGITIV---SISLFMSLGMGIMFESPPVVAALL-I 178
           Q++DI IDKVNKPYLP+A+G+ S +    +V   +I+  + +G    F   P + +L  +
Sbjct: 159 QIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLLVVG----FNFGPFITSLYSL 214

Query: 179 SFVLGSVYSVELPFMRWKKQAFLAATCILIVRAIVVQLAFFAHMQKFVLGKPIVITKSLV 238
              LG++YSV  P +R K+    A   I  VR  ++    + H  +  LG P   +  + 
Sbjct: 215 GLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY-HATRAALGLPFQWSAPVA 271

Query: 239 FAVAFMCFFSAVIALFKDIPDVDGDRDFGIRSFSVSLGQERVFWLCVNMXXXXXXXXXXX 298
           F  +F+  F+ VIA+ KD+PDV+GDR F I + +  LG   + +L   +           
Sbjct: 272 FITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSAISL 331

Query: 299 XXSCSLGPSKLITMLGHCTLALVLWMQAQSVDLS--SNNSITCFYMFIWKLFYAEYFLIP 356
                      + +  H  LA  L  Q   ++ +  +  +I+ +Y FIW LFYAEY L P
Sbjct: 332 AFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKEAISGYYRFIWNLFYAEYLLFP 391

Query: 357 FV 358
           F+
Sbjct: 392 FL 393


>AT3G51820.1 | Symbols: ATG4, G4, CHLG | G4; chlorophyll synthetase
           | chr3:19216301-19218934 REVERSE
          Length = 387

 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 16/176 (9%)

Query: 117 YVVGLNQLFDIEIDKVNKPYLPLASGNFSKEIGITIVSISLFMSLGMGIMFE------SP 170
           Y   +N  +D +ID +N+PY P+ SG  S+   IT V + L   LG+  + +      +P
Sbjct: 150 YTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTP 209

Query: 171 PVVAALLISFVLGSVYSVELPFMRWKKQAFLAATCILIVRAIVVQLAFFAHMQKFVLGKP 230
            V    L   +L  +YS   P ++ K+  ++       + A  + L ++A    F    P
Sbjct: 210 TVFYLALGGSLLSYIYSA--PPLKLKQNGWVGN---FALGASYISLPWWAGQALFGTLTP 264

Query: 231 IVITKSLVFAVAFMCFFSAVIALFKDIPDVDGDRDFGIRSFSVSLGQERVFWLCVN 286
            V+  +L++++A +      IA+  D   V+GDR  G++S  V+ G E   W+CV 
Sbjct: 265 DVVVLTLLYSIAGLG-----IAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVG 315