Jatropha Genome Database
- JcCA0074811.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0074811.10 - phase: 0
(432 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box protein 5); ubiq... 676 0.0
AT4G24390.1 | Symbols: | F-box family protein (FBX14) | chr4:12... 646 0.0
AT4G24390.2 | Symbols: | F-box family protein (FBX14) | chr4:12... 646 0.0
AT1G12820.1 | Symbols: AFB3 | AFB3 (AUXIN SIGNALING F-BOX 3); au... 442 e-124
AT3G26810.1 | Symbols: AFB2 | AFB2 (AUXIN SIGNALING F-BOX 2); au... 418 e-117
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 (GRR1-LIKE PROT... 404 e-113
AT3G62980.1 | Symbols: TIR1 | TIR1 (TRANSPORT INHIBITOR RESPONSE... 383 e-106
AT2G39940.1 | Symbols: COI1 | COI1 (CORONATINE INSENSITIVE 1); p... 172 4e-43
AT4G15475.1 | Symbols: | F-box family protein (FBL4) | chr4:884... 61 1e-09
AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BINDING F BOX PRO... 60 3e-09
>AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box protein 5);
ubiquitin-protein ligase | chr5:20334420-20336531
REVERSE
Length = 619
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/420 (76%), Positives = 373/420 (88%), Gaps = 1/420 (0%)
Query: 13 RQLRVLDLIESEVSDDEVDWISCFPESEMCLESLIFDCVECPINFSALERLVARSPSLKK 72
R+L+VLDLIESEV+DDEVDWISCFPE CLESL FDCVE PINF ALE LVARSP LKK
Sbjct: 201 RKLKVLDLIESEVTDDEVDWISCFPEDVTCLESLAFDCVEAPINFKALEGLVARSPFLKK 260
Query: 73 IRLNRHVSIGQLYRLMVRAPQLTHLGTGSFRPSEDVAQGEQEPDFVSAFAACKSLVCLSG 132
+RLNR VS+ +L+RL++ APQLT LGTGSF E+ Q EQEPD+ +AF ACKS+VCLSG
Sbjct: 261 LRLNRFVSLVELHRLLLGAPQLTSLGTGSFSHDEE-PQSEQEPDYAAAFRACKSVVCLSG 319
Query: 133 FRDILPDYLPAIYPVCAILTSLNLSYANVTAEQIKPIISNCYKLQIFWVLDSICDEGLQA 192
FR+++P+YLPAI+PVCA LTSLN SYAN++ + KPII NC+KLQ+FW LDSICDEGLQA
Sbjct: 320 FRELMPEYLPAIFPVCANLTSLNFSYANISPDMFKPIILNCHKLQVFWALDSICDEGLQA 379
Query: 193 VAATCKELRELRVFPIDAREDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAAVIAMS 252
VAATCKELRELR+FP D REDSEGPVSE+GLQAISEGCRKL+SILYFCQRMTNAAVIAMS
Sbjct: 380 VAATCKELRELRIFPFDPREDSEGPVSELGLQAISEGCRKLESILYFCQRMTNAAVIAMS 439
Query: 253 KNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFNYIGK 312
+NCP+L VFRLCIMGRHRPDHVTG+PMDEGFGAIV NCKKLTRLAVSGLLTD+AF Y+G+
Sbjct: 440 ENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGE 499
Query: 313 YGKTVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRFLWM 372
YGK VRTLSVAFAGDSDM L++VLEGCPRLQKLEIRDSPFGD AL SG+H YYNMRF+WM
Sbjct: 500 YGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSGMHRYYNMRFVWM 559
Query: 373 SSCKLTQGGCQQVARALPHLVLEVINQEIDEDMDSNVDTLYMYRSLEGPRDDAPKFVSIL 432
S+C L++G C+ +ARA+P+LV+EVI + D+D V+TLYMYRSL+GPR+DAPKFV+IL
Sbjct: 560 SACSLSKGCCKDIARAMPNLVVEVIGSDDDDDNRDYVETLYMYRSLDGPRNDAPKFVTIL 619
>AT4G24390.1 | Symbols: | F-box family protein (FBX14) |
chr4:12613909-12615966 REVERSE
Length = 623
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/424 (72%), Positives = 361/424 (85%), Gaps = 5/424 (1%)
Query: 13 RQLRVLDLIESEVSDDEVDWISCFPESEMCLESLIFDCVECPINFSALERLVARSPSLKK 72
RQL+VLDL+ESEV+DDE+DWISCFPE E LESL FDCVE PINF ALE LV RSP LKK
Sbjct: 201 RQLKVLDLMESEVTDDELDWISCFPEGETHLESLSFDCVESPINFKALEELVVRSPFLKK 260
Query: 73 IRLNRHVSIGQLYRLMVRAPQLTHLGTGSFRPSEDVAQGEQEPDFVSAFAACKSLVCLSG 132
+R NR VS+ +L+RLMVRAPQLT LGTGSF P ++V QGEQ+PD+ +AF ACKS+VCLSG
Sbjct: 261 LRTNRFVSLEELHRLMVRAPQLTSLGTGSFSP-DNVPQGEQQPDYAAAFRACKSIVCLSG 319
Query: 133 FRDILPDYLPAIYPVCAILTSLNLSYANVTAEQIKPIISNCYKLQIFWVLDSICDEGLQA 192
FR+ P+YL AI VCA LTSLN SYAN++ +KPIISNC+ +++FW LDSI DEGLQA
Sbjct: 320 FREFRPEYLLAISSVCANLTSLNFSYANISPHMLKPIISNCHNIRVFWALDSIRDEGLQA 379
Query: 193 VAATCKELRELRVFPIDAREDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAAVIAMS 252
VAATCKELRELR+FP D REDSEGPVS VGLQAISEGCRKL+SILYFCQ MTN AV AMS
Sbjct: 380 VAATCKELRELRIFPFDPREDSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMS 439
Query: 253 KNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFNYIGK 312
+NCP L VFRLCIMGRHRPDHVTG+PMD+GFGAIV NCKKLTRLAVSGLLTD AF+YIG+
Sbjct: 440 ENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGE 499
Query: 313 YGKTVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRFLWM 372
YGK +RTLSVAFAG+SD L+YVLEGCP+LQKLEIRDSPFGD L SG+H Y NMRF+W+
Sbjct: 500 YGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNMRFVWL 559
Query: 373 SSCKLTQGGCQQVARALPHLVLEVINQEIDEDMDS----NVDTLYMYRSLEGPRDDAPKF 428
SSC +++GGC+ V+ ALP++V+EV + D+D D+ V+TLY+YRSL+GPR DAPKF
Sbjct: 560 SSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKF 619
Query: 429 VSIL 432
V+IL
Sbjct: 620 VTIL 623
>AT4G24390.2 | Symbols: | F-box family protein (FBX14) |
chr4:12613909-12615966 REVERSE
Length = 623
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/424 (72%), Positives = 361/424 (85%), Gaps = 5/424 (1%)
Query: 13 RQLRVLDLIESEVSDDEVDWISCFPESEMCLESLIFDCVECPINFSALERLVARSPSLKK 72
RQL+VLDL+ESEV+DDE+DWISCFPE E LESL FDCVE PINF ALE LV RSP LKK
Sbjct: 201 RQLKVLDLMESEVTDDELDWISCFPEGETHLESLSFDCVESPINFKALEELVVRSPFLKK 260
Query: 73 IRLNRHVSIGQLYRLMVRAPQLTHLGTGSFRPSEDVAQGEQEPDFVSAFAACKSLVCLSG 132
+R NR VS+ +L+RLMVRAPQLT LGTGSF P ++V QGEQ+PD+ +AF ACKS+VCLSG
Sbjct: 261 LRTNRFVSLEELHRLMVRAPQLTSLGTGSFSP-DNVPQGEQQPDYAAAFRACKSIVCLSG 319
Query: 133 FRDILPDYLPAIYPVCAILTSLNLSYANVTAEQIKPIISNCYKLQIFWVLDSICDEGLQA 192
FR+ P+YL AI VCA LTSLN SYAN++ +KPIISNC+ +++FW LDSI DEGLQA
Sbjct: 320 FREFRPEYLLAISSVCANLTSLNFSYANISPHMLKPIISNCHNIRVFWALDSIRDEGLQA 379
Query: 193 VAATCKELRELRVFPIDAREDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAAVIAMS 252
VAATCKELRELR+FP D REDSEGPVS VGLQAISEGCRKL+SILYFCQ MTN AV AMS
Sbjct: 380 VAATCKELRELRIFPFDPREDSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMS 439
Query: 253 KNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFNYIGK 312
+NCP L VFRLCIMGRHRPDHVTG+PMD+GFGAIV NCKKLTRLAVSGLLTD AF+YIG+
Sbjct: 440 ENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGE 499
Query: 313 YGKTVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRFLWM 372
YGK +RTLSVAFAG+SD L+YVLEGCP+LQKLEIRDSPFGD L SG+H Y NMRF+W+
Sbjct: 500 YGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNMRFVWL 559
Query: 373 SSCKLTQGGCQQVARALPHLVLEVINQEIDEDMDS----NVDTLYMYRSLEGPRDDAPKF 428
SSC +++GGC+ V+ ALP++V+EV + D+D D+ V+TLY+YRSL+GPR DAPKF
Sbjct: 560 SSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKF 619
Query: 429 VSIL 432
V+IL
Sbjct: 620 VTIL 623
>AT1G12820.1 | Symbols: AFB3 | AFB3 (AUXIN SIGNALING F-BOX 3); auxin
binding / ubiquitin-protein ligase |
chr1:4368879-4370780 REVERSE
Length = 577
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/430 (53%), Positives = 296/430 (68%), Gaps = 13/430 (3%)
Query: 13 RQLRVLDLIESEVSDDEVDWISCFPESEMCLESLIFDCVECPINFSALERLVARSPSLKK 72
R LR LDL E+E+ D W++CFP+S L SL F C++ N +ALERLVARSP+LK
Sbjct: 151 RHLRELDLQENEIDDHRGQWLNCFPDSCTTLMSLNFACLKGETNVAALERLVARSPNLKS 210
Query: 73 IRLNRHVSIGQLYRLMVRAPQLTHLGTGSFRPSEDVAQGEQEPDFVSAFAACKSLVCLSG 132
++LNR V + L RLM APQL LG GS+ E+ E ++A SL LSG
Sbjct: 211 LKLNRAVPLDALARLMSCAPQLVDLGVGSY---ENEPDPESFAKLMTAIKKYTSLRSLSG 267
Query: 133 FRDILPDYLPAIYPVCAILTSLNLSYA-NVTAEQIKPIISNCYKLQIFWVLDSICDEGLQ 191
F ++ P LPA YP+C L SLNLSYA + + +I C +LQ W+LDSI D+GL
Sbjct: 268 FLEVAPLCLPAFYPICQNLISLNLSYAAEIQGNHLIKLIQLCKRLQRLWILDSIGDKGLA 327
Query: 192 AVAATCKELRELRVFPID--AREDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAAVI 249
VAATCKEL+ELRVFP D ED+ V+EVGL AIS GC KL SILYFC++MTNAA+I
Sbjct: 328 VVAATCKELQELRVFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSILYFCKQMTNAALI 387
Query: 250 AMSKNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFNY 309
A++KNCP+ + FRLCI+ H+PDH+T + +DEGFGAIV CK L RL+VSGLLTD+ F Y
Sbjct: 388 AVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSVSGLLTDQVFLY 447
Query: 310 IGKYGKTVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRF 369
IG Y + + LS+AFAGD+D G+ YVL GC +++KLEIRDSPFG+AALL+ + Y MR
Sbjct: 448 IGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAALLADVGRYETMRS 507
Query: 370 LWMSSCKLTQGGCQQVARALPHLVLEVINQEIDEDMDSN-------VDTLYMYRSLEGPR 422
LWMSSC++T GGC+++A+ P L +E+IN+ + M+ N VD LY+YR++ G R
Sbjct: 508 LWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGMEQNEEDEREKVDKLYLYRTVVGTR 567
Query: 423 DDAPKFVSIL 432
DAP +V IL
Sbjct: 568 KDAPPYVRIL 577
>AT3G26810.1 | Symbols: AFB2 | AFB2 (AUXIN SIGNALING F-BOX 2); auxin
binding / ubiquitin-protein ligase |
chr3:9868342-9870464 FORWARD
Length = 575
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/428 (51%), Positives = 287/428 (67%), Gaps = 11/428 (2%)
Query: 13 RQLRVLDLIESEVSDDEVDWISCFPESEMCLESLIFDCVECPINFSALERLVARSPSLKK 72
R LR LDL E+E+ D W+SCFP++ L +L F C+E N ALERLVARSP+LK
Sbjct: 151 RHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVTLNFACLEGETNLVALERLVARSPNLKS 210
Query: 73 IRLNRHVSIGQLYRLMVRAPQLTHLGTGSFRPSEDVAQGEQEPDFVSAFAACKSLVCLSG 132
++LNR V + L RLM APQ+ LG GS+ D E ++ C SL LSG
Sbjct: 211 LKLNRAVPLDALARLMACAPQIVDLGVGSYENDPD---SESYLKLMAVIKKCTSLRSLSG 267
Query: 133 FRDILPDYLPAIYPVCAILTSLNLSYA-NVTAEQIKPIISNCYKLQIFWVLDSICDEGLQ 191
F + P L A +P+C LTSLNLSYA + + +I +C KLQ W+LDSI D+GL+
Sbjct: 268 FLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGSHLIKLIQHCKKLQRLWILDSIGDKGLE 327
Query: 192 AVAATCKELRELRVFPIDAREDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAAVIAM 251
VA+TCKEL+ELRVFP D V+E GL AIS GC KL SILYFCQ+MTNAA++ +
Sbjct: 328 VVASTCKELQELRVFPSDLLGGGNTAVTEEGLVAISAGCPKLHSILYFCQQMTNAALVTV 387
Query: 252 SKNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFNYIG 311
+KNCP+ + FRLCI+ ++PDHVT +P+DEGFGAIV CK L RL++SGLLTD+ F YIG
Sbjct: 388 AKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIG 447
Query: 312 KYGKTVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRFLW 371
Y + LS+AFAGD+D G+ YVL GC +++KLEIRDSPFGD ALL+ + Y MR LW
Sbjct: 448 MYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLADVSKYETMRSLW 507
Query: 372 MSSCKLTQGGCQQVARALPHLVLEVINQEIDEDMDSN-------VDTLYMYRSLEGPRDD 424
MSSC++T GC+++A P L +E+IN+ + M+ N VD LY+YR++ G R D
Sbjct: 508 MSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRMEENGHEGRQKVDKLYLYRTVVGTRMD 567
Query: 425 APKFVSIL 432
AP FV IL
Sbjct: 568 APPFVWIL 575
>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 (GRR1-LIKE PROTEIN
1); auxin binding / protein binding / ubiquitin-protein
ligase | chr4:1405108-1407057 REVERSE
Length = 585
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/422 (50%), Positives = 283/422 (67%), Gaps = 10/422 (2%)
Query: 13 RQLRVLDLIESEVSDDEVDWISCFPESEMCLESLIFDCVECPINFSALERLVARSPSLKK 72
R LRVL+L E V D DW+S FPES L SL F C++ + S LERLV+RSP+LK
Sbjct: 152 RNLRVLELRECIVEDLGGDWLSYFPESSTSLVSLDFSCLDSEVKISDLERLVSRSPNLKS 211
Query: 73 IRLNRHVSIGQLYRLMVRAPQLTHLGTGSFRPSEDVAQGEQEP--DFVSAFAACKSLVCL 130
++LN V++ L L+ APQLT LGTGSF AQ + E AF+ CK L L
Sbjct: 212 LKLNPAVTLDGLVSLLRCAPQLTELGTGSF-----AAQLKPEAFSKLSEAFSNCKQLQSL 266
Query: 131 SGFRDILPDYLPAIYPVCAILTSLNLSYANVTAEQIKPIISNCYKLQIFWVLDSICDEGL 190
SG D+LP+YLPA+Y VC LTSLNLSYA V + ++ C KLQ WV+D I D+GL
Sbjct: 267 SGLWDVLPEYLPALYSVCPGLTSLNLSYATVRMPDLVELLRRCSKLQKLWVMDLIEDKGL 326
Query: 191 QAVAATCKELRELRVFPIDAREDSEG-PVSEVGLQAISEGCRKLQSILYFCQRMTNAAVI 249
+AVA+ CKELRELRVFP + D+ P++E GL +S+GCRKL+S+LYFC + TNAA+
Sbjct: 327 EAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFVSKGCRKLESVLYFCVQFTNAALF 386
Query: 250 AMSKNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFNY 309
+++ P+L FRLC++ PD+ T EP+D+GF AI C+ L RL+VSGLL+D+AF Y
Sbjct: 387 TIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVSGLLSDKAFKY 446
Query: 310 IGKYGKTVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRF 369
IGK+ K VR LS+AFAGDSD+ L ++L GC L+KLEIRD PFGD ALL MR
Sbjct: 447 IGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLEIRDCPFGDTALLEHAAKLETMRS 506
Query: 370 LWMSSCKLTQGGCQQVARALPHLVLEVINQEIDEDM--DSNVDTLYMYRSLEGPRDDAPK 427
LWMSSC ++ G C+ +++ +P L +EVI++ E S V+ +Y+YR++ GPR D P+
Sbjct: 507 LWMSSCFVSFGACKLLSQKMPRLNVEVIDEHPPESRPESSPVERIYIYRTVAGPRMDTPE 566
Query: 428 FV 429
FV
Sbjct: 567 FV 568
>AT3G62980.1 | Symbols: TIR1 | TIR1 (TRANSPORT INHIBITOR RESPONSE
1); auxin binding / protein binding / ubiquitin-protein
ligase | chr3:23273479-23276181 REVERSE
Length = 594
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/425 (49%), Positives = 282/425 (66%), Gaps = 15/425 (3%)
Query: 13 RQLRVLDLIESEVSDDEVDWISCFPESEMCLESLIFDCVECPINFSALERLVARSPSLKK 72
R L+ LDL ES+V D W+S FP++ L SL C+ ++FSALERLV R P+LK
Sbjct: 156 RNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKS 215
Query: 73 IRLNRHVSIGQLYRLMVRAPQLTHLGTGSFRPSEDVAQGEQEPDFVS----AFAACKSLV 128
++LNR V + +L L+ RAPQL LGTG + E PD S A + CK L
Sbjct: 216 LKLNRAVPLEKLATLLQRAPQLEELGTGGY-------TAEVRPDVYSGLSVALSGCKELR 268
Query: 129 CLSGFRDILPDYLPAIYPVCAILTSLNLSYANVTAEQIKPIISNCYKLQIFWVLDSICDE 188
CLSGF D +P YLPA+Y VC+ LT+LNLSYA V + + ++ C KLQ WVLD I D
Sbjct: 269 CLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDA 328
Query: 189 GLQAVAATCKELRELRVFPIDA-REDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAA 247
GL+ +A+TCK+LRELRVFP + + ++E GL ++S GC KL+S+LYFC++MTNAA
Sbjct: 329 GLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAA 388
Query: 248 VIAMSKNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAF 307
+I +++N P++ FRLCI+ PD++T EP+D GFGAIV +CK L RL++SGLLTD+ F
Sbjct: 389 LITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVF 448
Query: 308 NYIGKYGKTVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNM 367
YIG Y K + LSVAFAGDSD+G+ +VL GC L+KLEIRD PFGD ALL+ M
Sbjct: 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETM 508
Query: 368 RFLWMSSCKLTQGGCQQVARALPHLVLEVINQEIDEDMDSN---VDTLYMYRSLEGPRDD 424
R LWMSSC ++ G C+ + + +P L +EVI++ D V+ +++YR++ GPR D
Sbjct: 509 RSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPDSRPESCPVERVFIYRTVAGPRFD 568
Query: 425 APKFV 429
P FV
Sbjct: 569 MPGFV 573
>AT2G39940.1 | Symbols: COI1 | COI1 (CORONATINE INSENSITIVE 1);
protein binding / ubiquitin-protein ligase |
chr2:16672848-16675486 REVERSE
Length = 592
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 210/435 (48%), Gaps = 25/435 (5%)
Query: 13 RQLRVLDLIESEVSDDEVDWISCFPESEMCLESLIFDCVE-CPINFSALERLVARSPSLK 71
R+++ L + ES S+ + W+ + LE L F E I+ LE + SL
Sbjct: 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223
Query: 72 KIRLNRHVSIGQLYRLMVRAPQLTHLGTGSFRPSEDVAQGEQEPDFVSAFAACKSLVCLS 131
+++ I +L A L GS +ED+ E+ + V C+ +
Sbjct: 224 SVKVG-DFEILELVGFFKAAANLEEFCGGSL--NEDIGMPEKYMNLVFPRKLCRLGLSYM 280
Query: 132 GFRDILPDYLPAIYPVCAILTSLNLSYANVTAEQIKPIISNCYKLQIFWVLDSICDEGLQ 191
G P+ +P ++P A + L+L YA + E +I C L++ + I D GL+
Sbjct: 281 G-----PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLE 335
Query: 192 AVAATCKELRELRV---FPIDAREDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAAV 248
+A CK+L+ LR+ ED EG VS+ GL A+++GC++L+ + + +TN ++
Sbjct: 336 VLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESL 395
Query: 249 IAMSKNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAV---SGLLTDR 305
++ +L FRL ++ R + +T P+D G ++++ CKKL R A G LTD
Sbjct: 396 ESIGTYLKNLCDFRLVLLDRE--ERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDL 453
Query: 306 AFNYIGKYGKTVRTLSVAFAGDSDMGLKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYY 365
+YIG+Y VR + + + G+SD GL GCP LQKLE+R F + A+ + +
Sbjct: 454 GLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLP 513
Query: 366 NMRFLWMSSCKLTQGGCQQVARALPHLVLEVI--------NQEIDEDMDSNVDTLYMYRS 417
++R+LW+ + + G + A P+ +E+I NQ+ + + + Y S
Sbjct: 514 SLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYS 573
Query: 418 LEGPRDDAPKFVSIL 432
L G R D P V +L
Sbjct: 574 LAGQRTDCPTTVRVL 588
>AT4G15475.1 | Symbols: | F-box family protein (FBL4) |
chr4:8845927-8848701 FORWARD
Length = 610
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 60/304 (19%)
Query: 141 LPAIYPVCAILTSLNL-SYANVTAEQIKPIISNCYKLQIFWVLDS--ICDEGLQAVAATC 197
A+ +C L L L S+ + T + ++ I KL+ + D + +GL+A+A C
Sbjct: 286 FAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGC 345
Query: 198 KELRELRVFPIDAREDSEGPVSEVGLQAISEGCRKLQSI-LYFCQRMTNAAVIAMSKNCP 256
KEL + + + + G++AI + C +L+ + L +CQR+ N+A+ + K C
Sbjct: 346 KELERVEI-------NGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCK 398
Query: 257 DLVVFRL-----------CIMGRH----RPDHVTG--EPMDEGFGAIVMNCKKLTRLAVS 299
L + L C + + + H+ E ++G +I +CK LT L++
Sbjct: 399 SLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLR 458
Query: 300 --GLLTDRAFNYIGKYGKTVRTLSVAFAGD-SDMGLKYVLEGCPRLQKLEIR------DS 350
+ ++A IGK G +++ L+V+ SD G+ + GCP+L L+I D
Sbjct: 459 FCDKVGNKALIAIGK-GCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDM 517
Query: 351 PFGDAA---------LLSGLHHYY-NMRFLWMSSCKL------------TQGGCQQVARA 388
P + +LS HH N + CKL T G V +
Sbjct: 518 PLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSS 577
Query: 389 LPHL 392
PH+
Sbjct: 578 CPHI 581
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 159 ANVTAEQIKPIISNCYKLQIFWVLDS--ICDEGLQAVAATCKELRELRVFPIDAREDSEG 216
A +T ++ + S+C L++ + LDS I D+GL AVA C L+ L++ +
Sbjct: 229 AKITDLSLEAVGSHCKLLEVLY-LDSEYIHDKGLIAVAQGCHRLKNLKLQCV-------- 279
Query: 217 PVSEVGLQAISEGCRKLQSI-LYFCQRMTNAAVIAM---SKNCPDLVV----FRLCIMGR 268
V++V A+ E C L+ + LY Q T+ + A+ SK DL + F C
Sbjct: 280 SVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSC---- 335
Query: 269 HRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGL--LTDRAFNYIGKYGKTVRTLSVAFA- 325
+G AI CK+L R+ ++G + R IGK ++ L++ +
Sbjct: 336 ------------KGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQ 383
Query: 326 --GDSDMGLKYVLEGCPRLQKLEIRD-SPFGDAALLSGLHHYYNMRFLWMSSC 375
G+S L+ + +GC L+ L + D S GD A+ S N++ L + C
Sbjct: 384 RIGNS--ALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRC 434
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 39/187 (20%)
Query: 187 DEGLQAVAATCKELRELRVFPIDARED--------------------SEGPVSEVGLQAI 226
D+GL AV CK+L EL + + D + ++++ L+A+
Sbjct: 180 DQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAV 239
Query: 227 SEGCRKLQSILYFCQRMTNAAVIAMSKNCPDLVVFRL-CIMGRHRPDHVTGEPMDEGFGA 285
C+ L+ + + + + +IA+++ C L +L C+ D F A
Sbjct: 240 GSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCV-----------SVTDVAFAA 288
Query: 286 IVMNCKKLTRLAVSGL--LTDRAFNYIGKYGKTVRTLSVA---FAGDSDMGLKYVLEGCP 340
+ C L RLA+ TD+ IGK K ++ L+++ F S GL+ + GC
Sbjct: 289 VGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFV--SCKGLEAIAHGCK 346
Query: 341 RLQKLEI 347
L+++EI
Sbjct: 347 ELERVEI 353
>AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BINDING F BOX
PROTEIN 1); protein binding / ubiquitin-protein ligase |
chr2:10848018-10850275 REVERSE
Length = 628
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 76/257 (29%)
Query: 185 ICDEGLQAVAATCKELRELRVFPIDAREDSEGPVSEVGLQAISEGCRKLQSI-LYFCQRM 243
+ D GL+++ +C L L ++ + D+ GL I+EGC +L+ + L C +
Sbjct: 164 VSDLGLRSIGRSCPSLGSLSLWNVSTITDN-------GLLEIAEGCAQLEKLELNRCSTI 216
Query: 244 TNAAVIAMSKNCPDLVVFRLCIMGRHRPDHVTGEPMDEGFGAIVMNCKKLTRLAVSGL-- 301
T+ ++A++K+CP+L L DEG AI +C KL +++
Sbjct: 217 TDKGLVAIAKSCPNLTELTL---------EACSRIGDEGLLAIARSCSKLKSVSIKNCPL 267
Query: 302 --------------------------LTDRAFNYIGKYGKTVRTLSVAF----------- 324
+TD + +G YG ++ L +A
Sbjct: 268 VRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWV 327
Query: 325 ------------------AGDSDMGLKYVLEGCPRLQKLEIRDSP-FGDAALLSGLHHYY 365
G +DMGL+ V +GCP ++K I SP D L+S
Sbjct: 328 MGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASL 387
Query: 366 NMRFLWMSSC-KLTQGG 381
++ L + C ++TQ G
Sbjct: 388 SLESLQLEECHRVTQFG 404