Jatropha Genome Database

JcCA0072081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0072081.10 - phase: 0 
         (180 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22080.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   206   6e-54

>AT5G22080.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr5:7310600-7313540 REVERSE
          Length = 246

 Score =  206 bits (525), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/153 (78%), Positives = 131/153 (85%)

Query: 28  ERDYLLSQVTAAKEELLSKRRKQLKKDTASKIKSLVDEGKYEKQYEKSEEFQRELKLKVR 87
           ERDY+L+QV AAKEEL  KR+KQLKKDTASKIKSLVDEGK+E  YE+SEEFQ+ELKLKVR
Sbjct: 94  ERDYILTQVHAAKEELKMKRKKQLKKDTASKIKSLVDEGKHEHIYEQSEEFQKELKLKVR 153

Query: 88  EILTEQEWRRRKMQMRISXXXXXXXXXXXXQKEMWKRKREHEEQWEGTREQRVSSWRDFM 147
           EILT+QEWRRRKM MRIS            QKE+WK+KREHEEQWEGTRE+RVSSWRDF 
Sbjct: 154 EILTDQEWRRRKMAMRISEEEGRLKKDEAEQKEIWKKKREHEEQWEGTREKRVSSWRDFQ 213

Query: 148 KTGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG 180
           K GKK KKGE RPPKLKTEDPNKSYVQRPVK+G
Sbjct: 214 KAGKKAKKGETRPPKLKTEDPNKSYVQRPVKKG 246