Jatropha Genome Database

JcCA0071331.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071331.20 - phase: 0 /partial
         (76 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42910.1 | Symbols:  | ribose-phosphate pyrophosphokinase 4 /...   131   8e-32
AT1G10700.1 | Symbols:  | ribose-phosphate pyrophosphokinase 3 /...   114   2e-26

>AT2G42910.1 | Symbols:  | ribose-phosphate pyrophosphokinase 4 /
           phosphoribosyl diphosphate synthetase 4 (PRS4) |
           chr2:17856396-17858394 FORWARD
          Length = 337

 Score =  131 bits (330), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/76 (82%), Positives = 65/76 (85%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGSGSAFAYFWITDSCPLTVKSIANKPP 60
           KVLAAHGA KVSAYVTHGVFP  SWERFT K +G   AFAYFWITDSCP TVK+I NK P
Sbjct: 262 KVLAAHGAVKVSAYVTHGVFPKSSWERFTHKKNGLEEAFAYFWITDSCPQTVKAIGNKAP 321

Query: 61  FEVLSLAGSIADALQI 76
           FEVLSLAGSIADALQI
Sbjct: 322 FEVLSLAGSIADALQI 337


>AT1G10700.1 | Symbols:  | ribose-phosphate pyrophosphokinase 3 /
           phosphoribosyl diphosphate synthetase 3 (PRS3) |
           chr1:3554157-3556274 FORWARD
          Length = 411

 Score =  114 bits (284), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 53/77 (68%), Positives = 61/77 (79%), Gaps = 1/77 (1%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGS-GSAFAYFWITDSCPLTVKSIANKP 59
           KVLAAHGAAK+SAYVTHG+FP  SW+RF   + G      +YFWITDSC +TVK + NKP
Sbjct: 335 KVLAAHGAAKISAYVTHGIFPRSSWKRFKLDTKGDPAEGLSYFWITDSCGMTVKEVMNKP 394

Query: 60  PFEVLSLAGSIADALQI 76
           PFEVLSLAGSIA ALQ+
Sbjct: 395 PFEVLSLAGSIASALQV 411