Jatropha Genome Database

JcCA0071061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071061.10 - phase: 2 /TE
         (1395 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   459   e-129
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   175   2e-43
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...   110   1e-23
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    80   8e-15

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  459 bits (1182), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/525 (45%), Positives = 335/525 (63%), Gaps = 10/525 (1%)

Query: 858  YPISSFVSYDHLSPSSRCFVSNLDSVSIPKTVVQALSHPGWCAAMKEEMVALDTNGTWDL 917
            + IS F+SY+ +SP    F+  +     P T  +A     WC AM +E+ A++T  TW++
Sbjct: 58   HDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEI 117

Query: 918  VPLLAGKKAIGCKWVFTVKMNPDGSVARLKARLVAKGYSQIYGLDYSDTFSPVAKLSSVR 977
              L   KK IGCKWV+ +K N DG++ R KARLVAKGY+Q  G+D+ +TFSPV KL+SV+
Sbjct: 118  CTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVK 177

Query: 978  LFISLAATFDWPLHQLDVKNAFLYGDLQEEVYMEQPPGFVA-QGEL---GKVCKLRKSLY 1033
            L ++++A +++ LHQLD+ NAFL GDL EE+YM+ PPG+ A QG+      VC L+KS+Y
Sbjct: 178  LILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIY 237

Query: 1034 GLKQSPRAWFGRFCNVVHQFGMQKSTSDHSVFFRSTNTGXXXXXXXXXXXXXTGSDSAGI 1093
            GLKQ+ R WF +F   +  FG  +S SDH+ F + T T                ++ A +
Sbjct: 238  GLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAV 297

Query: 1094 TSLKSFLQTQFQTKDLGLLKYFLGIEVSRCKRGIFLSQRKYVLDLLKETGKLGAKPCSAP 1153
              LKS L++ F+ +DLG LKYFLG+E++R   GI + QRKY LDLL ETG LG KP S P
Sbjct: 298  DELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVP 357

Query: 1154 MTPNLQLSI--GGELFDDPEMYRRLVGKLNYLTVTRPDIAYSVSVLSQFMSSPTVIHWEA 1211
            M P++  S   GG+ F D + YRRL+G+L YL +TR DI+++V+ LSQF  +P + H +A
Sbjct: 358  MDPSVTFSAHSGGD-FVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQA 416

Query: 1212 LGQILCYLKGNPGRGLLYSNHRHLNIECFSDADWAGSKVDRRSISGYCVFVGGNLISWRS 1271
            + +IL Y+KG  G+GL YS+   + ++ FSDA +   K  RRS +GYC+F+G +LISW+S
Sbjct: 417  VMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 476

Query: 1272 KKQNXXXXXXXXXXYRAMAQSACELIWIRQLLEEIGFKSSLPAKLWCDNQAALHIASNPV 1331
            KKQ           YRA++ +  E++W+ Q   E+    S P  L+CDN AA+HIA+N V
Sbjct: 477  KKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAV 536

Query: 1332 FHERTKHIEIDCRFIREK-IQQGVISTGHVKTSEQLGDIFTKALN 1375
            FHERTKHIE DC  +RE+ + Q  +S       EQ G  FT+ L+
Sbjct: 537  FHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQDG--FTEYLS 579


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  175 bits (443), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 124/213 (58%)

Query: 1086 TGSDSAGITSLKSFLQTQFQTKDLGLLKYFLGIEVSRCKRGIFLSQRKYVLDLLKETGKL 1145
            TGS +  +  L   L + F  KDLG + YFLGI++     G+FLSQ KY   +L   G L
Sbjct: 13   TGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGML 72

Query: 1146 GAKPCSAPMTPNLQLSIGGELFDDPEMYRRLVGKLNYLTVTRPDIAYSVSVLSQFMSSPT 1205
              KP S P+   L  S+    + DP  +R +VG L YLT+TRPDI+Y+V+++ Q M  PT
Sbjct: 73   DCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPT 132

Query: 1206 VIHWEALGQILCYLKGNPGRGLLYSNHRHLNIECFSDADWAGSKVDRRSISGYCVFVGGN 1265
            +  ++ L ++L Y+KG    GL    +  LN++ F D+DWAG    RRS +G+C F+G N
Sbjct: 133  LADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCN 192

Query: 1266 LISWRSKKQNXXXXXXXXXXYRAMAQSACELIW 1298
            +ISW +K+Q           YRA+A +A EL W
Sbjct: 193  IISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 71/102 (69%)

Query: 886 PKTVVQALSHPGWCAAMKEEMVALDTNGTWDLVPLLAGKKAIGCKWVFTVKMNPDGSVAR 945
           PK+V+ AL  PGWC AM+EE+ AL  N TW LVP    +  +GCKWVF  K++ DG++ R
Sbjct: 28  PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87

Query: 946 LKARLVAKGYSQIYGLDYSDTFSPVAKLSSVRLFISLAATFD 987
           LKARLVAKG+ Q  G+ + +T+SPV + +++R  +++A   +
Sbjct: 88  LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
            chrM:68918-69253 REVERSE
          Length = 111

 Score = 80.5 bits (197), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 54/81 (66%)

Query: 1182 YLTVTRPDIAYSVSVLSQFMSSPTVIHWEALGQILCYLKGNPGRGLLYSNHRHLNIECFS 1241
            YLT+TRPD+ ++V+ LSQF S+      +A+ ++L Y+KG  G+GL YS    L ++ F+
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 1242 DADWAGSKVDRRSISGYCVFV 1262
            D+DWA     RRS++G+C  V
Sbjct: 62   DSDWASCPDTRRSVTGFCSLV 82