Jatropha Genome Database
- JcCA0070561.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0070561.10 + phase: 0 /partial
(549 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26810.1 | Symbols: AFB2 | AFB2 (AUXIN SIGNALING F-BOX 2); au... 848 0.0
AT1G12820.1 | Symbols: AFB3 | AFB3 (AUXIN SIGNALING F-BOX 3); au... 831 0.0
AT3G62980.1 | Symbols: TIR1 | TIR1 (TRANSPORT INHIBITOR RESPONSE... 657 0.0
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 (GRR1-LIKE PROT... 588 e-168
AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box protein 5); ubiq... 511 e-145
AT4G24390.1 | Symbols: | F-box family protein (FBX14) | chr4:12... 492 e-139
AT4G24390.2 | Symbols: | F-box family protein (FBX14) | chr4:12... 492 e-139
AT2G39940.1 | Symbols: COI1 | COI1 (CORONATINE INSENSITIVE 1); p... 253 2e-67
AT4G15475.1 | Symbols: | F-box family protein (FBL4) | chr4:884... 90 5e-18
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/ASK1 INTERACTIN... 72 1e-12
AT1G21410.1 | Symbols: SKP2A | SKP2A | chr1:7497479-7499386 FORWARD 59 8e-09
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | SKP2B; ubiquitin-protei... 57 4e-08
AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PROTEINE 2); ubiq... 56 5e-08
AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BINDING F BOX PRO... 55 1e-07
AT5G01720.1 | Symbols: | F-box family protein (FBL3) | chr5:267... 55 2e-07
>AT3G26810.1 | Symbols: AFB2 | AFB2 (AUXIN SIGNALING F-BOX 2); auxin
binding / ubiquitin-protein ligase |
chr3:9868342-9870464 FORWARD
Length = 575
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/553 (74%), Positives = 461/553 (83%), Gaps = 4/553 (0%)
Query: 1 MNYFPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIGRF 60
MNYFPDEV+EHVFDFVTSH+DRN++S VCKSWY+IE YSR+KVFIGNCYAI+PER++ RF
Sbjct: 1 MNYFPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRF 60
Query: 61 PGLKSITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXX 120
P LKS+TLKGKPHFADFNLVP++WGGFV PWIEA R+RVGLEELRLKRMVV
Sbjct: 61 PCLKSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELL 120
Query: 121 XRSFVNFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTS 180
RSFVNFKSLVLVSCEGFTTDGLA++AANCR+LR+LDLQE+E++DHRG WLSCFPD+CT+
Sbjct: 121 SRSFVNFKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTT 180
Query: 181 LVSLNFACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGSY 240
LV+LNFACL+G+ NL LERLVA AVPLD L +++ +PQ+VDLGVGSY
Sbjct: 181 LVTLNFACLEGETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSY 240
Query: 241 VHDPDSETYNKLVTAIQKCKSVRSLSGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGS 300
+DPDSE+Y KL+ I+KC S+RSLSGFLE APHCL AFH IC LTSLNLSYA I GS
Sbjct: 241 ENDPDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGS 300
Query: 301 ELTKLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDPY-VGNAAVTEEGLV 359
L KLI+HC+KLQRLWILD IGDKGLEVVASTCK+LQELRVFPSD GN AVTEEGLV
Sbjct: 301 HLIKLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNTAVTEEGLV 360
Query: 360 AISSGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDEGFG 419
AIS+GCPKLHSILYFCQQMTNAAL+TVAKNCPNF RFRLCIL+P KPD VT QPLDEGFG
Sbjct: 361 AISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFG 420
Query: 420 AIVHSCKXXXXXXXXXXXXDQVFLYIGMYAEQLEMLSIAFAGDSDKGMQYVLNGCKRLRK 479
AIV +CK DQVFLYIGMYA QLEMLSIAFAGD+DKGM YVLNGCK+++K
Sbjct: 421 AIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKK 480
Query: 480 LEIRDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPRLNVEIMNENEQ-- 537
LEIRDSPFG+ ALL DV KYETMRSLWMSSCEVTL GCK LA+K P LNVEI+NEN+
Sbjct: 481 LEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNR 540
Query: 538 -AEFGVDDSQKVD 549
E G + QKVD
Sbjct: 541 MEENGHEGRQKVD 553
>AT1G12820.1 | Symbols: AFB3 | AFB3 (AUXIN SIGNALING F-BOX 3); auxin
binding / ubiquitin-protein ligase |
chr1:4368879-4370780 REVERSE
Length = 577
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/555 (72%), Positives = 461/555 (83%), Gaps = 6/555 (1%)
Query: 1 MNYFPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIGRF 60
MNYFPDEV+EHVFDFV SH+DRNS+S VCKSW++IE +SR++VFIGNCYAI+PER+I RF
Sbjct: 1 MNYFPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRF 60
Query: 61 PGLKSITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXX 120
P LKS+TLKGKPHFADFNLVP++WGGFV+PWIEA R+RVGLEELRLKRMVV
Sbjct: 61 PCLKSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLL 120
Query: 121 XRSFVNFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTS 180
RSF NFKSLVLVSCEGFTTDGLA++AANCR+LRELDLQE+E++DHRG WL+CFPDSCT+
Sbjct: 121 SRSFANFKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTT 180
Query: 181 LVSLNFACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGSY 240
L+SLNFACLKG+ N+ LERLVA AVPLD L +++ +PQLVDLGVGSY
Sbjct: 181 LMSLNFACLKGETNVAALERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSY 240
Query: 241 VHDPDSETYNKLVTAIQKCKSVRSLSGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGS 300
++PD E++ KL+TAI+K S+RSLSGFLEVAP CLPAF+ IC L SLNLSYA IQG+
Sbjct: 241 ENEPDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAAEIQGN 300
Query: 301 ELTKLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDPYV---GNAAVTEEG 357
L KLI+ C++LQRLWILD IGDKGL VVA+TCK+LQELRVFPSD + NA+VTE G
Sbjct: 301 HLIKLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVG 360
Query: 358 LVAISSGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDEG 417
LVAIS+GCPKLHSILYFC+QMTNAALI VAKNCPNF RFRLCIL+P KPD +T Q LDEG
Sbjct: 361 LVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEG 420
Query: 418 FGAIVHSCKXXXXXXXXXXXXDQVFLYIGMYAEQLEMLSIAFAGDSDKGMQYVLNGCKRL 477
FGAIV +CK DQVFLYIGMYAEQLEMLSIAFAGD+DKGM YVLNGCK++
Sbjct: 421 FGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKM 480
Query: 478 RKLEIRDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPRLNVEIMNENEQ 537
RKLEIRDSPFGNAALL DVG+YETMRSLWMSSCEVTLGGCK LA+ PRLNVEI+NENE
Sbjct: 481 RKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENEN 540
Query: 538 ---AEFGVDDSQKVD 549
+ D+ +KVD
Sbjct: 541 NGMEQNEEDEREKVD 555
>AT3G62980.1 | Symbols: TIR1 | TIR1 (TRANSPORT INHIBITOR RESPONSE
1); auxin binding / protein binding / ubiquitin-protein
ligase | chr3:23273479-23276181 REVERSE
Length = 594
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/545 (58%), Positives = 396/545 (72%), Gaps = 8/545 (1%)
Query: 4 FPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIGRFPGL 63
FP+EVLEHVF F+ +DRNSVS VCKSWY IE + R KVFIGNCYA+SP VI RFP +
Sbjct: 9 FPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKV 68
Query: 64 KSITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXXXRS 123
+S+ LKGKPHFADFNLVP+ WGG+VYPWIEA + LEE+RLKRMVV +S
Sbjct: 69 RSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKS 128
Query: 124 FVNFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTSLVS 183
F NFK LVL SCEGF+TDGLAA+AA CRNL+ELDL+E +V+D GHWLS FPD+ TSLVS
Sbjct: 129 FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188
Query: 184 LNFACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGSYVHD 243
LN +CL +++ LERLV AVPL+ L +L ++PQL +LG G Y +
Sbjct: 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAE 248
Query: 244 PDSETYNKLVTAIQKCKSVRSLSGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGSELT 303
+ Y+ L A+ CK +R LSGF + P LPA + +C LT+LNLSYA +Q +L
Sbjct: 249 VRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYA-TVQSYDLV 307
Query: 304 KLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDPYV--GNAAVTEEGLVAI 361
KL+ C KLQRLW+LD I D GLEV+ASTCKDL+ELRVFPS+P+V N A+TE+GLV++
Sbjct: 308 KLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367
Query: 362 SSGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDEGFGAI 421
S GCPKL S+LYFC+QMTNAALIT+A+N PN TRFRLCI++P PD +T++PLD GFGAI
Sbjct: 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAI 427
Query: 422 VHSCKXXXXXXXXXXXXDQVFLYIGMYAEQLEMLSIAFAGDSDKGMQYVLNGCKRLRKLE 481
V CK D+VF YIG YA+++EMLS+AFAGDSD GM +VL+GC LRKLE
Sbjct: 428 VEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLE 487
Query: 482 IRDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPRLNVEIMNENEQAEFG 541
IRD PFG+ ALL + K ETMRSLWMSSC V+ G CK L +KMP+LNVE+++E G
Sbjct: 488 IRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDER-----G 542
Query: 542 VDDSQ 546
DS+
Sbjct: 543 APDSR 547
>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 (GRR1-LIKE PROTEIN
1); auxin binding / protein binding / ubiquitin-protein
ligase | chr4:1405108-1407057 REVERSE
Length = 585
Score = 588 bits (1515), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/534 (53%), Positives = 373/534 (69%), Gaps = 3/534 (0%)
Query: 4 FPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIGRFPGL 63
FP +VLEH+ F+ S+ DRNSVS VCKSW+ E +R++VF+GNCYA+SP V RFP +
Sbjct: 5 FPPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRRFPEM 64
Query: 64 KSITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXXXRS 123
+S+TLKGKPHFAD+NLVP+ WGG+ +PWIEA LEE+R+KRMVV S
Sbjct: 65 RSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEKIAAS 124
Query: 124 FVNFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTSLVS 183
F +FK LVL SCEGF+TDG+AA+AA CRNLR L+L+E VED G WLS FP+S TSLVS
Sbjct: 125 FKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVS 184
Query: 184 LNFACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGSYVHD 243
L+F+CL ++ + LERLV+ AV LD L +L +PQL +LG GS+
Sbjct: 185 LDFSCLDSEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQ 244
Query: 244 PDSETYNKLVTAIQKCKSVRSLSGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGSELT 303
E ++KL A CK ++SLSG +V P LPA + +CP LTSLNLSYA ++ +L
Sbjct: 245 LKPEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYA-TVRMPDLV 303
Query: 304 KLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDPYVG--NAAVTEEGLVAI 361
+L+R C KLQ+LW++D I DKGLE VAS CK+L+ELRVFPS+P + N +TE+GLV +
Sbjct: 304 ELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFV 363
Query: 362 SSGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDEGFGAI 421
S GC KL S+LYFC Q TNAAL T+A+ PN FRLC+++P PD T +PLD+GF AI
Sbjct: 364 SKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAI 423
Query: 422 VHSCKXXXXXXXXXXXXDQVFLYIGMYAEQLEMLSIAFAGDSDKGMQYVLNGCKRLRKLE 481
C+ D+ F YIG +A+++ MLSIAFAGDSD + ++L+GC+ L+KLE
Sbjct: 424 AEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLE 483
Query: 482 IRDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPRLNVEIMNEN 535
IRD PFG+ ALL K ETMRSLWMSSC V+ G CK L++KMPRLNVE+++E+
Sbjct: 484 IRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEH 537
>AT5G49980.1 | Symbols: AFB5 | AFB5 (Auxin F-Box protein 5);
ubiquitin-protein ligase | chr5:20334420-20336531
REVERSE
Length = 619
Score = 511 bits (1315), Expect = e-145, Method: Compositional matrix adjust.
Identities = 264/536 (49%), Positives = 337/536 (62%), Gaps = 8/536 (1%)
Query: 4 FPDEVLEHVFD----FVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIGR 59
FPD VLE+V + F+ S DRN+ S VCKSW+R+E+ +R +VFIGNCYA+SP R+ R
Sbjct: 50 FPDHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARLTQR 109
Query: 60 FPGLKSITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXX 119
F ++S+ LKGKP FADFNL+P DWG PW+ + LE++ LKRM V
Sbjct: 110 FKRVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDDLAL 169
Query: 120 XXRSFVNFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCT 179
SF FK L+LV CEGF T G++ VA CR L+ LDL E EV D W+SCFP+ T
Sbjct: 170 LADSFPGFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEVDWISCFPEDVT 229
Query: 180 SLVSLNFACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGS 239
L SL F C++ IN LE LVA V L L ++L+ +PQL LG GS
Sbjct: 230 CLESLAFDCVEAPINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLLGAPQLTSLGTGS 289
Query: 240 YVHD--PDSETYNKLVTAIQKCKSVRSLSGFLEVAPHCLPAFHLICPTLTSLNLSYAPGI 297
+ HD P SE A + CKSV LSGF E+ P LPA +C LTSLN SYA I
Sbjct: 290 FSHDEEPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNFSYA-NI 348
Query: 298 QGSELTKLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDPYV-GNAAVTEE 356
+I +C KLQ W LD I D+GL+ VA+TCK+L+ELR+FP DP V+E
Sbjct: 349 SPDMFKPIILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPREDSEGPVSEL 408
Query: 357 GLVAISSGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDE 416
GL AIS GC KL SILYFCQ+MTNAA+I +++NCP T FRLCI+ +PD VT +P+DE
Sbjct: 409 GLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDE 468
Query: 417 GFGAIVHSCKXXXXXXXXXXXXDQVFLYIGMYAEQLEMLSIAFAGDSDKGMQYVLNGCKR 476
GFGAIV +CK DQ F Y+G Y + + LS+AFAGDSD +++VL GC R
Sbjct: 469 GFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPR 528
Query: 477 LRKLEIRDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPRLNVEIM 532
L+KLEIRDSPFG+ AL + +Y MR +WMS+C ++ G CK +A+ MP L VE++
Sbjct: 529 LQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVI 584
>AT4G24390.1 | Symbols: | F-box family protein (FBX14) |
chr4:12613909-12615966 REVERSE
Length = 623
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/546 (46%), Positives = 335/546 (61%), Gaps = 9/546 (1%)
Query: 6 DEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIGRFPGLKS 65
+ VLE+V F+TS DRN+VS VC+SWYR+E+ +R +VFIGNCY++SP R+I RF ++S
Sbjct: 56 ENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRS 115
Query: 66 ITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXXXRSFV 125
+ LKGKP FADFNL+P +WG PW+ A + LE++ LKRM V SF
Sbjct: 116 LVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP 175
Query: 126 NFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTSLVSLN 185
FK L LV CEGF T G+A VA CR L+ LDL E EV D W+SCFP+ T L SL+
Sbjct: 176 GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLS 235
Query: 186 FACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGSYVHD-- 243
F C++ IN LE LV V L+ L ++++++PQL LG GS+ D
Sbjct: 236 FDCVESPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNV 295
Query: 244 PDSETYNKLVTAIQKCKSVRSLSGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGSELT 303
P E A + CKS+ LSGF E P L A +C LTSLN SYA I L
Sbjct: 296 PQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYA-NISPHMLK 354
Query: 304 KLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDPYV-GNAAVTEEGLVAIS 362
+I +C ++ W LD I D+GL+ VA+TCK+L+ELR+FP DP V+ GL AIS
Sbjct: 355 PIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGPVSGVGLQAIS 414
Query: 363 SGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDEGFGAIV 422
GC KL SILYFCQ MTN A+ +++NCP T FRLCI+ +PD VT +P+D+GFGAIV
Sbjct: 415 EGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIV 474
Query: 423 HSCKXXXXXXXXXXXXDQVFLYIGMYAEQLEMLSIAFAGDSDKGMQYVLNGCKRLRKLEI 482
+CK D+ F YIG Y + + LS+AFAG+SDK ++YVL GC +L+KLEI
Sbjct: 475 KNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEI 534
Query: 483 RDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPRLNVEIMNENEQAEFGV 542
RDSPFG+ L + +Y MR +W+SSC ++ GGC+ ++ +P + VE+ + G
Sbjct: 535 RDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGAD-----GD 589
Query: 543 DDSQKV 548
DD V
Sbjct: 590 DDEDTV 595
>AT4G24390.2 | Symbols: | F-box family protein (FBX14) |
chr4:12613909-12615966 REVERSE
Length = 623
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/546 (46%), Positives = 335/546 (61%), Gaps = 9/546 (1%)
Query: 6 DEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIGRFPGLKS 65
+ VLE+V F+TS DRN+VS VC+SWYR+E+ +R +VFIGNCY++SP R+I RF ++S
Sbjct: 56 ENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRS 115
Query: 66 ITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXXXRSFV 125
+ LKGKP FADFNL+P +WG PW+ A + LE++ LKRM V SF
Sbjct: 116 LVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP 175
Query: 126 NFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTSLVSLN 185
FK L LV CEGF T G+A VA CR L+ LDL E EV D W+SCFP+ T L SL+
Sbjct: 176 GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLS 235
Query: 186 FACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGSYVHD-- 243
F C++ IN LE LV V L+ L ++++++PQL LG GS+ D
Sbjct: 236 FDCVESPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNV 295
Query: 244 PDSETYNKLVTAIQKCKSVRSLSGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGSELT 303
P E A + CKS+ LSGF E P L A +C LTSLN SYA I L
Sbjct: 296 PQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYA-NISPHMLK 354
Query: 304 KLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDPYV-GNAAVTEEGLVAIS 362
+I +C ++ W LD I D+GL+ VA+TCK+L+ELR+FP DP V+ GL AIS
Sbjct: 355 PIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGPVSGVGLQAIS 414
Query: 363 SGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDEGFGAIV 422
GC KL SILYFCQ MTN A+ +++NCP T FRLCI+ +PD VT +P+D+GFGAIV
Sbjct: 415 EGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIV 474
Query: 423 HSCKXXXXXXXXXXXXDQVFLYIGMYAEQLEMLSIAFAGDSDKGMQYVLNGCKRLRKLEI 482
+CK D+ F YIG Y + + LS+AFAG+SDK ++YVL GC +L+KLEI
Sbjct: 475 KNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEI 534
Query: 483 RDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPRLNVEIMNENEQAEFGV 542
RDSPFG+ L + +Y MR +W+SSC ++ GGC+ ++ +P + VE+ + G
Sbjct: 535 RDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGAD-----GD 589
Query: 543 DDSQKV 548
DD V
Sbjct: 590 DDEDTV 595
>AT2G39940.1 | Symbols: COI1 | COI1 (CORONATINE INSENSITIVE 1);
protein binding / ubiquitin-protein ligase |
chr2:16672848-16675486 REVERSE
Length = 592
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 260/537 (48%), Gaps = 19/537 (3%)
Query: 6 DEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIGRFPGLKS 65
D+V+E V ++T +DR+S S VC+ W++I+S +RE V + CY +P+R+ RFP L+S
Sbjct: 18 DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRS 77
Query: 66 ITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXXXRSFV 125
+ LKGKP A FNL+P +WGG+V PW+ N L+ + +RM+V ++
Sbjct: 78 LKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARA 137
Query: 126 -NFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTSLVSL 184
+ ++L L C GFTTDGL ++ +CR ++ L ++E + G WL TSL L
Sbjct: 138 DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197
Query: 185 NFACLK-GDINLGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGSYVHD 243
NF + I+ LE +A + L + L + GS D
Sbjct: 198 NFYMTEFAKISPKDLE-TIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNED 256
Query: 244 PD-SETYNKLVTAIQKCKSVRSLSGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGSEL 302
E Y LV + C+ G + P+ +P + L+L YA ++ +
Sbjct: 257 IGMPEKYMNLVFPRKLCR-----LGLSYMGPNEMPILFPFAAQIRKLDLLYAL-LETEDH 310
Query: 303 TKLIRHCRKLQRLWILDCIGDKGLEVVASTCKDLQELRVFPSDPYVG----NAAVTEEGL 358
LI+ C L+ L + IGD+GLEV+A CK L+ LR+ G V++ GL
Sbjct: 311 CTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL 370
Query: 359 VAISSGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCILDPTKPDAVTMQPLDEGF 418
+A++ GC +L + + +TN +L ++ N FRL +LD + + +T PLD G
Sbjct: 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLD--REERITDLPLDNGV 428
Query: 419 GAIVHSCKXXXXXXXXXXX---XDQVFLYIGMYAEQLEMLSIAFAGDSDKGMQYVLNGCK 475
+++ CK D YIG Y+ + + + + G+SD+G+ GC
Sbjct: 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCP 488
Query: 476 RLRKLEIRDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPRLNVEIM 532
L+KLE+R F A+ V K ++R LW+ ++ G + P N+E++
Sbjct: 489 NLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELI 545
>AT4G15475.1 | Symbols: | F-box family protein (FBL4) |
chr4:8845927-8848701 FORWARD
Length = 610
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 123/547 (22%), Positives = 222/547 (40%), Gaps = 71/547 (12%)
Query: 2 NYFPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISPERVIG--- 58
N P+E++ +F + S +R++ S VCK W +E +SR + IG + SP+ I
Sbjct: 9 NCLPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASF--SPDDFISLLS 66
Query: 59 -RFPGLKSITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEEL------RLKRMV 111
RF + SI + + + +L P+ R L + ++
Sbjct: 67 RRFLYITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSS 126
Query: 112 VXXXXXXXXXRSFVNFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWL 171
+ F ++L L+ C ++ GL ++A C +L+ LDLQ V D L
Sbjct: 127 LTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQ---GL 183
Query: 172 SCFPDSCTSLVSLNFACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLD--TLQKILMQS 229
+ C L LN +G ++GV++ +V + + +L+ +
Sbjct: 184 AAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHC 243
Query: 230 PQLVDLGVGS-YVHDPDSETYNKLVTAIQKCKSVRSLS-GFLEVAPHCLPAFHLICPTLT 287
L L + S Y+HD L+ Q C +++L + V A +C +L
Sbjct: 244 KLLEVLYLDSEYIHDKG------LIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLE 297
Query: 288 SLNLSYAPGIQGSELTKLIRHCRKLQRLWILDC--IGDKGLEVVASTCKDLQELRVFPSD 345
L L + + + +KL+ L + DC + KGLE +A CK+L+ + +
Sbjct: 298 RLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEIN--- 354
Query: 346 PYVGNAAVTEEGLVAISSGCPKLHSI-LYFCQQMTNAALITVAKNCPNFTRFRLCILDPT 404
G + G+ AI CP+L + L +CQ++ N+AL + K C + L +D +
Sbjct: 355 ---GCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHL--VDCS 409
Query: 405 KPDAVTMQPLDEGFGAIVHSCKXXXXXXXXXXXXDQVFLYIGMYAEQLEMLSIAFAGD-S 463
+ M + +G L+ L I +
Sbjct: 410 GIGDIAMCSIAKG-------------------------------CRNLKKLHIRRCYEIG 438
Query: 464 DKGMQYVLNGCKRLRKLEIR-DSPFGNAALLMDVGKYETMRSLWMSSC-EVTLGGCKTLA 521
+KG+ + CK L +L +R GN AL+ +GK +++ L +S C +++ G +A
Sbjct: 439 NKGIISIGKHCKSLTELSLRFCDKVGNKALIA-IGKGCSLQQLNVSGCNQISDAGITAIA 497
Query: 522 KKMPRLN 528
+ P+L
Sbjct: 498 RGCPQLT 504
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 283 CPTLTSLNLSYAPGIQGSELTKLIRHCRKLQRLWILDC--IGDKGLEVVASTCKDLQELR 340
C +L L+L GI + + + CR L++L I C IG+KG+ + CK L EL
Sbjct: 397 CKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELS 456
Query: 341 VFPSDPYVGNAAVTEEGLVAISSGCPKLHSILYFCQQMTNAALITVAKNCPNFTRFRLCI 400
+ D VGN A L+AI GC + C Q+++A + +A+ CP T + +
Sbjct: 457 LRFCDK-VGNKA-----LIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISV 510
Query: 401 L 401
L
Sbjct: 511 L 511
>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/ASK1 INTERACTING
PROTEIN 2); ubiquitin-protein ligase |
chr5:26831677-26833260 REVERSE
Length = 527
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 153/401 (38%), Gaps = 67/401 (16%)
Query: 4 FPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISP--ERVIGRFP 61
PDE L HVF F+ + DR S VCK W ++ SR ++ + IS + RF
Sbjct: 46 LPDECLAHVFQFLGAG-DRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMFNRFD 104
Query: 62 GLKSITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXXX 121
+ + L+ D V + RV L R +
Sbjct: 105 SVTKLALR-----CDRKSVSLSDEALAMISVRCLNLTRVKLRGCR----EITDLGMEDFA 155
Query: 122 RSFVNFKSLVLVSCEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTSL 181
++ N K L + SC F G+ A+ +C+ L EL ++ H L PD +S
Sbjct: 156 KNCKNLKKLSVGSCN-FGAKGVNAMLEHCKLLEELSVKRLR-GIHEAAELIHLPDDASS- 212
Query: 182 VSLNFACLKGDINLGVLERLVAXXXXXXXXX------------XXXAVPLDTLQKILMQS 229
SL CLK +N V E L+A A +L +I ++
Sbjct: 213 SSLRSICLKELVNGQVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIANGKSSLSEIHLER 272
Query: 230 PQLVDLGVGSYVHDPDSETYN----------KLVTAIQKCKSVRSL------------SG 267
Q+ D+G+ + + ET + L+ ++CK +R L G
Sbjct: 273 LQVSDIGLSAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEG 332
Query: 268 FLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGSELTKLIRHCRKLQRLWILD--CIGDKG 325
L VA HCL L+ + + ++S A + +C KL+RL + IGD
Sbjct: 333 LLSVAKHCLNLQELVLIGVNATHMSLAA---------IASNCEKLERLALCGSGTIGDTE 383
Query: 326 LEVVASTCKDLQELRVFPSDPYVGNAAVTEEGLVAISSGCP 366
+ +A C L++ + V++ G+ A++ GCP
Sbjct: 384 IACIARKCGALRKF-------CIKGCPVSDRGIEALAVGCP 417
>AT1G21410.1 | Symbols: SKP2A | SKP2A | chr1:7497479-7499386 FORWARD
Length = 360
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 26/191 (13%)
Query: 225 ILMQSPQLVDLGVGSYVHDPDSETYNKLVTAIQKCKSVRSL--SGFLEVAPHCLPAFHLI 282
+L P+ V L + D N + C ++ L S L++ L A
Sbjct: 82 VLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHG 141
Query: 283 CPTLTSLNLSYAPGIQGSELTKLIRHCRKLQRLWILDC---IGDKGLEVVASTCKDLQEL 339
CP LT LNLS + + L R CRKL+ L + C + D LE + + C +Q L
Sbjct: 142 CPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSL 201
Query: 340 RV----FPSDPYV----------------GNAAVTEEGLVAISSGCPKLHSI-LYFCQQM 378
+ SD V G +T+E +VA++ C L S+ LY+C+ +
Sbjct: 202 NLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNI 261
Query: 379 TNAALITVAKN 389
T+ A+ ++A++
Sbjct: 262 TDRAMYSLAQS 272
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | SKP2B; ubiquitin-protein
ligase | chr1:28940888-28942401 FORWARD
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 225 ILMQSPQLVDLGVGSYVHDPDSETYNKLVTAIQKCKSVRSL--SGFLEVAPHCLPAFHLI 282
+L +P+ V L D N + C ++ L S ++ H L +
Sbjct: 82 VLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARG 141
Query: 283 CPTLTSLNLSYAPGIQGSELTKLIRHCRKLQRLWILDC---IGDKGLEVVASTCKDLQEL 339
C LT LNLS + L L R CRKL+ L + C + D L+ + C LQ L
Sbjct: 142 CTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSL 201
Query: 340 RVFPSDPYVGNAAVTEEGLVAISSGCPKLHSI-LYFCQQMTNAALITVAKNCPNFTRFRL 398
+ + ++++G+++++ GCP L ++ L C +T+ +++ +A C + L
Sbjct: 202 NLGWCEN------ISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGL 255
>AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PROTEINE 2);
ubiquitin-protein ligase | chr3:18572788-18574356
FORWARD
Length = 522
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 155/404 (38%), Gaps = 77/404 (19%)
Query: 4 FPDEVLEHVFDFVTSHRDRNSVSQVCKSWYRIESYSREKVFIGNCYAISP--ERVIGRFP 61
PD+ L H+F F+++ DR S V K W ++ +R ++ + I P + RF
Sbjct: 44 LPDDCLAHIFQFLSAG-DRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIFNRFD 102
Query: 62 GLKSITLKGKPHFADFNLVPNDWGGFVYPWIEAFVRNRVGLEELRLKRMVVXXXXXXXXX 121
+ + L+ F+L +D F+ I RV L R
Sbjct: 103 SVTKLALRCDRR--SFSL--SDEALFIVS-IRCSNLIRVKLRGCR--------EITDLGM 149
Query: 122 RSFV-NFKSLVLVSCEG--FTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSC 178
SF N KSL +SC F G+ A+ +C+ L EL L+ RG P
Sbjct: 150 ESFARNCKSLRKLSCGSCTFGAKGINAMLEHCKVLEELSLKR-----IRGLHELAEPIKL 204
Query: 179 TSLVSLNFACLKGDINLGVLERLVAXXXXXXXXXXXXAVPLD-----------TLQKILM 227
+ SL LK +N V LVA D +L +I +
Sbjct: 205 SLSASLRSVFLKELVNGQVFGSLVATRTLKKVKIIRCLGNWDRVFEMNGNGNSSLTEIRL 264
Query: 228 QSPQLVDLGVGSY-----------VHDPDSETYNKLVTAIQKCKSVRSL----------- 265
+ Q+ D+G+ V PD L + +++CK +R L
Sbjct: 265 ERLQVTDIGLFGISKCSNLETLHIVKTPDCSNLG-LASVVERCKLLRKLHIDGWRVKRIG 323
Query: 266 -SGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGSELTKLIRHCRKLQRLWILD--CIG 322
G + VA HCL L+ L ++ +Y L+ + +C+KL+RL + IG
Sbjct: 324 DQGLMSVAKHCLNLQELV---LIGVDATYMS------LSAIASNCKKLERLALCGSGTIG 374
Query: 323 DKGLEVVASTCKDLQELRVFPSDPYVGNAAVTEEGLVAISSGCP 366
D + +A C L++ + +++ G+ A++ GCP
Sbjct: 375 DAEIGCIAEKCVTLRKF-------CIKGCLISDVGVQALALGCP 411
>AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BINDING F BOX
PROTEIN 1); protein binding / ubiquitin-protein ligase |
chr2:10848018-10850275 REVERSE
Length = 628
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 22/236 (9%)
Query: 283 CPTLTSLNLSYAPGIQGSELTKLIRHCRKLQRLWILDC--IGDKGLEVVASTCKDLQELR 340
CP+L SL+L I + L ++ C +L++L + C I DKGL +A +C +L EL
Sbjct: 176 CPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELT 235
Query: 341 VFPSDPYVGNAAVTEEGLVAISSGCPKLHSI-LYFCQQMTNAALITVAKNCP-NFTRFRL 398
+ + + +EGL+AI+ C KL S+ + C + + + ++ N + + +L
Sbjct: 236 LEAC------SRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKL 289
Query: 399 CILDPTKPDAVTMQPLDEGFGAIVHSCKXXXXXXXXXXXXDQVFLYI--GMYAEQLEMLS 456
+L+ T + +V + ++ F + G+ ++L L+
Sbjct: 290 QMLNVTDVSLAVVGHYGLSITDLVLA--------GLSHVSEKGFWVMGNGVGLQKLNSLT 341
Query: 457 I-AFAGDSDKGMQYVLNGCKRLRKLEIRDSPFGNAALLMDVGKYE-TMRSLWMSSC 510
I A G +D G++ V GC ++K I SP + L+ K ++ SL + C
Sbjct: 342 ITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEEC 397
>AT5G01720.1 | Symbols: | F-box family protein (FBL3) |
chr5:267118-270391 REVERSE
Length = 665
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 156/409 (38%), Gaps = 80/409 (19%)
Query: 135 CEGFTTDGLAAVAANCRNLRELDLQEDEVEDHRGHWLSCFPDSCTSLVSLNFACLKGDIN 194
C G D L ++ +C++L++LD + HRG L+ L L+ + I+
Sbjct: 236 CFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRG--LTSLLSGAGYLQRLDLSHCSSVIS 293
Query: 195 LGVLERLVAXXXXXXXXXXXXAVPLDTLQKILMQSPQLVDLGVGSYVHDPDSETYNKLVT 254
L L +V D L+ I L ++ + V S T L +
Sbjct: 294 LDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCV----SVTDEGLSS 349
Query: 255 AIQKCKSVRSL--SGFLEVAPHCLPAFHLICPTLTSLNLSYAPGIQGSELTKLIRHCRKL 312
+ K K +R L + +++ + CP L SL + + + + CR L
Sbjct: 350 LVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLL 409
Query: 313 QRLWILD------------------------C--IGDKGLEVVASTCKDLQELRVFPSDP 346
+ L + D C I DKGL + C +L+EL ++ S
Sbjct: 410 EELDLTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRS-- 467
Query: 347 YVGNAAVTEEGLVAISSGCPKLHSI-LYFCQQMTNAALITVAK----------NCPNFTR 395
+T+ G+ I+ GC L +I + +CQ +T+ +L++++K CPN T
Sbjct: 468 ----VGITDVGISTIAQGCIHLETINISYCQDITDKSLVSLSKCSLLQTFESRGCPNIT- 522
Query: 396 FRLCILDPTKPDAVTMQPLDEGFGAIVHSCKXXXXXXXXX--XXXDQVFLYIGMYAEQLE 453
+G AI CK D L + +++ L+
Sbjct: 523 -------------------SQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFSQNLK 563
Query: 454 MLSIAFAGDSDKGMQYVLN-GCKRLRKLEIRDS----PFGNAALLMDVG 497
++++ ++ G+ + N GC L+ + + +S P G AA L+ G
Sbjct: 564 QINVSDTAVTEVGLLSLANIGC--LQNIAVVNSSGLRPSGVAAALLGCG 610