Jatropha Genome Database

JcCA0070351.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0070351.20 + phase: 0 /TE/partial
         (443 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21000.1 | Symbols:  | unknown protein | chr3:7363921-7365138...   110   2e-24
AT1G34070.1 | Symbols:  | unknown protein | chr1:12402283-124032...    59   7e-09
AT3G20980.1 | Symbols:  | unknown protein | chr3:7355963-7357966...    57   3e-08
AT1G48720.1 | Symbols:  | unknown protein | chr1:18018148-180184...    51   1e-06

>AT3G21000.1 | Symbols:  | unknown protein | chr3:7363921-7365138
           FORWARD
          Length = 405

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 175/408 (42%), Gaps = 74/408 (18%)

Query: 22  YEFWAIKMRTMFISQELWELVENGCED-------------TDDEQKLRENKKKDAKALFF 68
           YE WA   ++  I Q LW++V NG                 ++  K R+   KDAKAL  
Sbjct: 17  YEIWAPITKSTLIEQGLWDVVVNGVPQDPSKNPELAATIQPEELSKWRDFVVKDAKALQI 76

Query: 69  LQQAVSDEIFSHISAAATSKEAWQILK--NEFQGSSKVITVKLQSLRRTFETLQMGDSES 126
           LQ +++D +F    +A+++K+ W +L+  NE     ++  V ++ L +  E L+M D ES
Sbjct: 77  LQSSLTDSVFRKTLSASSAKDVWDLLRKGNEQATIRRLEQVTIRRLEKQLEDLKMVDKES 136

Query: 127 VQAYLSRASKIISQM-RAYGEKITDETVVLKLLRSLSPKFDHVVAAIEESKDLSAYSFDD 185
             +YL +A +I+ ++ RA  EK +D  +   +  +LS  FD + + +EE  D+   +   
Sbjct: 137 GSSYLDKALEILERLGRAKLEK-SDYEICKNVFTTLSGSFDGLDSMLEELIDVHKMTSKS 195

Query: 186 LMGSLQAHESRINKSSTKIEEKAFQ-VKGESFHSKSHDKVXXXXXXXXXXXXXXXXXXXX 244
           L   ++    R+++SST  EE  F  +K     SKS                        
Sbjct: 196 L---VEYFYYRVHESST--EEAIFGLLKDLRLKSKSEK---------------------- 228

Query: 245 XXXXXXEQRQYKDNLIKCYYCDKVGHKEADCWTKQRNEGKQKNEGKHANVAEEEESMLFM 304
                            C  C K  H + DC  +   + ++K         E+E  + + 
Sbjct: 229 ----------------WCGLCYKNNHNQEDCKFRIHTDKEEK---------EDEIVVDYR 263

Query: 305 AHSIDKNAANA----IWFLDSGCSNHMSGTKQLFKELDEKEKTTVRLGDDKVIQVEGKGT 360
             ++    A      IW +      +M+   + F  LD   K TV   D  V+ VEGKG 
Sbjct: 264 LETVPNLGAKTYDDDIWIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGD 323

Query: 361 IAINTRHGNTKLLNDVQFAPSLAYNLLSIGQLMTSGYRIVFDDNSCCI 408
           + I  + G  K + +V F P L  N+LS G++++  Y I       CI
Sbjct: 324 VKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKRYSISTGMQGECI 371


>AT1G34070.1 | Symbols:  | unknown protein | chr1:12402283-12403209
           FORWARD
          Length = 308

 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 6/118 (5%)

Query: 83  AAATSKEAWQILKNEFQGSSKVITVKLQSLRRTFETLQMGDSESVQAYLSRASKIISQMR 142
            ++TS++ W  +KN+F+ +     ++L S  RT +   +GD   V  Y  +  K+   +R
Sbjct: 91  TSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKD---IGDMR-VADYYRKMKKLADSLR 146

Query: 143 AYGEKITDETVVLKLLRSLSPKFDHVVAAIEESKDLSAYSFDDLMGSLQAHESRINKS 200
                +TD  +V+ +L  L+PKFD+++  I+  +     SFDD    LQ  E R+ ++
Sbjct: 147 NVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFP--SFDDAATMLQEEEDRLKRA 202


>AT3G20980.1 | Symbols:  | unknown protein | chr3:7355963-7357966
           FORWARD
          Length = 405

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 316 IWFLDSGCSNHMSGTKQLFKELDEKEKTTVRL--GDDK---VIQVEGKGTIAINTRHGNT 370
           IW + S  SNHM+   + F  LD   K  V+   GD     V  VEG G +   T  GN 
Sbjct: 268 IWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSETTVAMVEGIGDVTFITNEGN- 326

Query: 371 KLLNDVQFAPSLAYNLLSIGQLMTSGYRIVFDDNS-CCIEDKKTG 414
           K + +V + P +  N LS+ QL  +G+ +  +  + C + D+ TG
Sbjct: 327 KTIKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFVWDRTTG 371


>AT1G48720.1 | Symbols:  | unknown protein |
          chr1:18018148-18018441 FORWARD
          Length = 97

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 55/93 (59%), Gaps = 9/93 (9%)

Query: 7  ATSTQPL-IPLFKGESYEFWAIKMRTMFISQELWELVENGCEDTDDE------QK--LRE 57
          A++  P  +P+    +Y+ W+++M+ +  + ++WE+VE G  + ++E      QK  LR+
Sbjct: 2  ASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRD 61

Query: 58 NKKKDAKALFFLQQAVSDEIFSHISAAATSKEA 90
          ++K+D KAL  + Q + ++ F  +  A ++K+ 
Sbjct: 62 SRKRDKKALCLIYQGLDEDTFEKVVEATSAKDG 94