Jatropha Genome Database

JcCA0068161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0068161.10 + phase: 0 /pseudo/partial
         (291 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G47510.2 | Symbols: FUM1 | FUM1 (FUMARASE 1); catalytic/ fuma...   491   e-139
AT2G47510.1 | Symbols: FUM1 | FUM1 (FUMARASE 1); catalytic/ fuma...   491   e-139
AT5G50950.2 | Symbols:  | fumarate hydratase, putative / fumaras...   481   e-136
AT5G50950.1 | Symbols:  | fumarate hydratase, putative / fumaras...   480   e-136
AT5G50950.3 | Symbols:  | fumarate hydratase, putative / fumaras...   394   e-110

>AT2G47510.2 | Symbols: FUM1 | FUM1 (FUMARASE 1); catalytic/
           fumarate hydratase | chr2:19498614-19502020 FORWARD
          Length = 492

 Score =  491 bits (1265), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/277 (85%), Positives = 250/277 (90%), Gaps = 5/277 (1%)

Query: 1   MATGVVARRLXXXXXXXXXXXXLRFA-SWRLYSTAFREERDTFGPIQVPSDKLWGAQTQR 59
           M+  V +RRL            LR+A S R YST+FREERDTFGPIQVPSDKLWGAQTQR
Sbjct: 1   MSIYVASRRLSGGTTVTA----LRYATSLRSYSTSFREERDTFGPIQVPSDKLWGAQTQR 56

Query: 60  SLQNFEIGGEREQMPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLND 119
           SLQNFEIGGERE+MPEPI+RAFG+LKKCAAKVNMEYGLDP+IGKAIMQAAQEVAEGKLND
Sbjct: 57  SLQNFEIGGERERMPEPIVRAFGVLKKCAAKVNMEYGLDPTIGKAIMQAAQEVAEGKLND 116

Query: 120 HFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVM 179
           HFPLVVWQTGSGTQSNMNANEVIANRAAEILG KRG K VHPNDHVNRSQSSNDTFPTVM
Sbjct: 117 HFPLVVWQTGSGTQSNMNANEVIANRAAEILGRKRGEKCVHPNDHVNRSQSSNDTFPTVM 176

Query: 180 HIAAATEINSRLIPNLKNLHTTLHSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQV 239
           HIAAATEINSRLIP+LK LH+TL SKS EFKDIVKIGRTHTQDATPLTLGQEF GY TQV
Sbjct: 177 HIAAATEINSRLIPSLKTLHSTLESKSFEFKDIVKIGRTHTQDATPLTLGQEFGGYATQV 236

Query: 240 KYGIDRIMCTLPRMYQLAQGGTAVGTGLNTKKGFDVK 276
           KYG++R+ CTLPR+YQLAQGGTAVGTGLNTKKGFDVK
Sbjct: 237 KYGLNRVTCTLPRLYQLAQGGTAVGTGLNTKKGFDVK 273


>AT2G47510.1 | Symbols: FUM1 | FUM1 (FUMARASE 1); catalytic/
           fumarate hydratase | chr2:19498614-19502020 FORWARD
          Length = 492

 Score =  491 bits (1265), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/277 (85%), Positives = 250/277 (90%), Gaps = 5/277 (1%)

Query: 1   MATGVVARRLXXXXXXXXXXXXLRFA-SWRLYSTAFREERDTFGPIQVPSDKLWGAQTQR 59
           M+  V +RRL            LR+A S R YST+FREERDTFGPIQVPSDKLWGAQTQR
Sbjct: 1   MSIYVASRRLSGGTTVTA----LRYATSLRSYSTSFREERDTFGPIQVPSDKLWGAQTQR 56

Query: 60  SLQNFEIGGEREQMPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLND 119
           SLQNFEIGGERE+MPEPI+RAFG+LKKCAAKVNMEYGLDP+IGKAIMQAAQEVAEGKLND
Sbjct: 57  SLQNFEIGGERERMPEPIVRAFGVLKKCAAKVNMEYGLDPTIGKAIMQAAQEVAEGKLND 116

Query: 120 HFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVM 179
           HFPLVVWQTGSGTQSNMNANEVIANRAAEILG KRG K VHPNDHVNRSQSSNDTFPTVM
Sbjct: 117 HFPLVVWQTGSGTQSNMNANEVIANRAAEILGRKRGEKCVHPNDHVNRSQSSNDTFPTVM 176

Query: 180 HIAAATEINSRLIPNLKNLHTTLHSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQV 239
           HIAAATEINSRLIP+LK LH+TL SKS EFKDIVKIGRTHTQDATPLTLGQEF GY TQV
Sbjct: 177 HIAAATEINSRLIPSLKTLHSTLESKSFEFKDIVKIGRTHTQDATPLTLGQEFGGYATQV 236

Query: 240 KYGIDRIMCTLPRMYQLAQGGTAVGTGLNTKKGFDVK 276
           KYG++R+ CTLPR+YQLAQGGTAVGTGLNTKKGFDVK
Sbjct: 237 KYGLNRVTCTLPRLYQLAQGGTAVGTGLNTKKGFDVK 273


>AT5G50950.2 | Symbols:  | fumarate hydratase, putative / fumarase,
           putative | chr5:20729687-20733636 FORWARD
          Length = 499

 Score =  481 bits (1239), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 223/248 (89%), Positives = 237/248 (95%)

Query: 29  RLYSTAFREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGGEREQMPEPIIRAFGILKKCA 88
           R YST FREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGG+RE+MPEPI+RAFG+LKKCA
Sbjct: 33  RSYSTPFREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGGDRERMPEPIVRAFGVLKKCA 92

Query: 89  AKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAE 148
           AKVNMEYGLDP IG+AIM+AAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAE
Sbjct: 93  AKVNMEYGLDPMIGEAIMEAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAE 152

Query: 149 ILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPNLKNLHTTLHSKSIE 208
           ILGHKRG K VHPNDHVNRSQSSNDTFPTVMHIAAATEI SRLIP+LKNLH++L SKS E
Sbjct: 153 ILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAATEITSRLIPSLKNLHSSLESKSFE 212

Query: 209 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRIMCTLPRMYQLAQGGTAVGTGLN 268
           FKDIVKIGRTHTQDATPLTLGQEF GY TQV+YG++R+ CTLPR+YQLAQGGTAVGTGLN
Sbjct: 213 FKDIVKIGRTHTQDATPLTLGQEFGGYATQVEYGLNRVACTLPRIYQLAQGGTAVGTGLN 272

Query: 269 TKKGFDVK 276
           TKKGFDVK
Sbjct: 273 TKKGFDVK 280


>AT5G50950.1 | Symbols:  | fumarate hydratase, putative / fumarase,
           putative | chr5:20729687-20733476 FORWARD
          Length = 510

 Score =  480 bits (1235), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 223/248 (89%), Positives = 237/248 (95%)

Query: 29  RLYSTAFREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGGEREQMPEPIIRAFGILKKCA 88
           R YST FREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGG+RE+MPEPI+RAFG+LKKCA
Sbjct: 33  RSYSTPFREERDTFGPIQVPSDKLWGAQTQRSLQNFEIGGDRERMPEPIVRAFGVLKKCA 92

Query: 89  AKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAE 148
           AKVNMEYGLDP IG+AIM+AAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAE
Sbjct: 93  AKVNMEYGLDPMIGEAIMEAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAE 152

Query: 149 ILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLIPNLKNLHTTLHSKSIE 208
           ILGHKRG K VHPNDHVNRSQSSNDTFPTVMHIAAATEI SRLIP+LKNLH++L SKS E
Sbjct: 153 ILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAATEITSRLIPSLKNLHSSLESKSFE 212

Query: 209 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRIMCTLPRMYQLAQGGTAVGTGLN 268
           FKDIVKIGRTHTQDATPLTLGQEF GY TQV+YG++R+ CTLPR+YQLAQGGTAVGTGLN
Sbjct: 213 FKDIVKIGRTHTQDATPLTLGQEFGGYATQVEYGLNRVACTLPRIYQLAQGGTAVGTGLN 272

Query: 269 TKKGFDVK 276
           TKKGFDVK
Sbjct: 273 TKKGFDVK 280


>AT5G50950.3 | Symbols:  | fumarate hydratase, putative / fumarase,
           putative | chr5:20729999-20733636 FORWARD
          Length = 423

 Score =  394 bits (1013), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 183/204 (89%), Positives = 195/204 (95%)

Query: 73  MPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGT 132
           MPEPI+RAFG+LKKCAAKVNMEYGLDP IG+AIM+AAQEVAEGKLNDHFPLVVWQTGSGT
Sbjct: 1   MPEPIVRAFGVLKKCAAKVNMEYGLDPMIGEAIMEAAQEVAEGKLNDHFPLVVWQTGSGT 60

Query: 133 QSNMNANEVIANRAAEILGHKRGGKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSRLI 192
           QSNMNANEVIANRAAEILGHKRG K VHPNDHVNRSQSSNDTFPTVMHIAAATEI SRLI
Sbjct: 61  QSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAATEITSRLI 120

Query: 193 PNLKNLHTTLHSKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRIMCTLPR 252
           P+LKNLH++L SKS EFKDIVKIGRTHTQDATPLTLGQEF GY TQV+YG++R+ CTLPR
Sbjct: 121 PSLKNLHSSLESKSFEFKDIVKIGRTHTQDATPLTLGQEFGGYATQVEYGLNRVACTLPR 180

Query: 253 MYQLAQGGTAVGTGLNTKKGFDVK 276
           +YQLAQGGTAVGTGLNTKKGFDVK
Sbjct: 181 IYQLAQGGTAVGTGLNTKKGFDVK 204