Jatropha Genome Database
- JcCA0066941.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0066941.10 + phase: 0 /partial
(189 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03270.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 355 1e-98
AT4G14240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 342 1e-94
AT4G14240.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 321 2e-88
AT4G14230.1 | Symbols: | CBS domain-containing protein-related ... 316 7e-87
AT4G33700.1 | Symbols: | CBS domain-containing protein | chr4:1... 237 4e-63
AT2G14520.1 | Symbols: | CBS domain-containing protein | chr2:6... 235 1e-62
AT5G52790.1 | Symbols: | CBS domain-containing protein-related ... 228 2e-60
AT1G47330.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 223 5e-59
>AT1G03270.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF21
(InterPro:IPR002550), Cystathionine beta-synthase, core
(InterPro:IPR000644); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G14240.1); Has 6515
Blast hits to 6357 proteins in 1347 species: Archae -
64; Bacteria - 4189; Metazoa - 291; Fungi - 188; Plants
- 123; Viruses - 0; Other Eukaryotes - 1660 (source:
NCBI BLink). | chr1:799191-802436 FORWARD
Length = 499
Score = 355 bits (910), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/189 (89%), Positives = 181/189 (95%)
Query: 1 SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
SLGLVELEILQ+SGSS EKKQAA I+PVV+KQHQLLVTLLLCNA AMEALPICLDKIFHP
Sbjct: 59 SLGLVELEILQQSGSSAEKKQAAAILPVVKKQHQLLVTLLLCNAAAMEALPICLDKIFHP 118
Query: 61 FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
FVAVLLSVTFVLAFGE+IPQAICSRYGL VGANF+WLVRILMIICYPIAYPIGK+LDA +
Sbjct: 119 FVAVLLSVTFVLAFGEIIPQAICSRYGLAVGANFLWLVRILMIICYPIAYPIGKVLDAVI 178
Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
GH+D LFRRAQLKALVSIH QEAGKGGELTH+ET IISGALDL++KTAEEAMTPIESTFS
Sbjct: 179 GHNDTLFRRAQLKALVSIHSQEAGKGGELTHEETMIISGALDLSQKTAEEAMTPIESTFS 238
Query: 181 LDVNSKLDW 189
LDVN+KLDW
Sbjct: 239 LDVNTKLDW 247
>AT4G14240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF21
(InterPro:IPR002550), Cystathionine beta-synthase, core
(InterPro:IPR000644); BEST Arabidopsis thaliana protein
match is: CBS domain-containing protein-related
(TAIR:AT4G14230.1); Has 6770 Blast hits to 6657 proteins
in 1347 species: Archae - 62; Bacteria - 4461; Metazoa -
254; Fungi - 179; Plants - 121; Viruses - 0; Other
Eukaryotes - 1693 (source: NCBI BLink). |
chr4:8204712-8207273 REVERSE
Length = 494
Score = 342 bits (876), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/189 (87%), Positives = 176/189 (93%)
Query: 1 SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
SLGLVELEILQRSG+ EKKQAA I PVVQKQHQLLVTLLLCNA AME LPI LDK+F+
Sbjct: 61 SLGLVELEILQRSGTPNEKKQAAAIFPVVQKQHQLLVTLLLCNAMAMEGLPIYLDKLFNE 120
Query: 61 FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
+VA++LSVTFVLAFGEVIPQAIC+RYGL VGANFVWLVRILM +CYPIA+PIGKILD L
Sbjct: 121 YVAIILSVTFVLAFGEVIPQAICTRYGLAVGANFVWLVRILMTLCYPIAFPIGKILDLVL 180
Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
GH+DALFRRAQLKALVSIH QEAGKGGELTHDETTIISGALDLTEKTA+EAMTPIESTFS
Sbjct: 181 GHNDALFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAQEAMTPIESTFS 240
Query: 181 LDVNSKLDW 189
LDVNSKLDW
Sbjct: 241 LDVNSKLDW 249
>AT4G14240.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF21
(InterPro:IPR002550), Cystathionine beta-synthase, core
(InterPro:IPR000644); BEST Arabidopsis thaliana protein
match is: CBS domain-containing protein-related
(TAIR:AT4G14230.1); Has 6735 Blast hits to 6622 proteins
in 1349 species: Archae - 62; Bacteria - 4446; Metazoa -
254; Fungi - 179; Plants - 121; Viruses - 0; Other
Eukaryotes - 1673 (source: NCBI BLink). |
chr4:8204712-8207273 REVERSE
Length = 485
Score = 321 bits (823), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/189 (84%), Positives = 169/189 (89%), Gaps = 9/189 (4%)
Query: 1 SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
SLGLVELEILQRS A I PVVQKQHQLLVTLLLCNA AME LPI LDK+F+
Sbjct: 61 SLGLVELEILQRS---------AAIFPVVQKQHQLLVTLLLCNAMAMEGLPIYLDKLFNE 111
Query: 61 FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
+VA++LSVTFVLAFGEVIPQAIC+RYGL VGANFVWLVRILM +CYPIA+PIGKILD L
Sbjct: 112 YVAIILSVTFVLAFGEVIPQAICTRYGLAVGANFVWLVRILMTLCYPIAFPIGKILDLVL 171
Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
GH+DALFRRAQLKALVSIH QEAGKGGELTHDETTIISGALDLTEKTA+EAMTPIESTFS
Sbjct: 172 GHNDALFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAQEAMTPIESTFS 231
Query: 181 LDVNSKLDW 189
LDVNSKLDW
Sbjct: 232 LDVNSKLDW 240
>AT4G14230.1 | Symbols: | CBS domain-containing protein-related |
chr4:8200850-8203130 REVERSE
Length = 495
Score = 316 bits (809), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 154/188 (81%), Positives = 169/188 (89%)
Query: 1 SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
SLGLVELEILQRSG+ EKKQ+A I PVVQKQHQLLVTLLL NA AME LPI LDKIF+
Sbjct: 60 SLGLVELEILQRSGTPKEKKQSAAIFPVVQKQHQLLVTLLLFNALAMEGLPIYLDKIFNE 119
Query: 61 FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
+VA++LSVTFVL GEVIPQAIC+RYGL VGAN VWLVRILM++ YPI++PI K+LD L
Sbjct: 120 YVAIILSVTFVLFVGEVIPQAICTRYGLAVGANLVWLVRILMVLSYPISFPIAKMLDWVL 179
Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
GH+D LFRRAQLKALVSIHG+ AGKGGELTHDETTIISGALDLTEKTA+EAMTPIESTFS
Sbjct: 180 GHNDPLFRRAQLKALVSIHGEAAGKGGELTHDETTIISGALDLTEKTAQEAMTPIESTFS 239
Query: 181 LDVNSKLD 188
LDVNSKLD
Sbjct: 240 LDVNSKLD 247
>AT4G33700.1 | Symbols: | CBS domain-containing protein |
chr4:16176547-16179188 REVERSE
Length = 424
Score = 237 bits (604), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 146/189 (77%), Gaps = 1/189 (0%)
Query: 1 SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
SL LV+LE+L +SG+ +K AA I+PVV+ QH LLVTLL+CNA AME LPI LD +
Sbjct: 38 SLSLVDLEVLAKSGTPEHRKYAAKILPVVKNQHLLLVTLLICNAAAMETLPIFLDGLVTA 97
Query: 61 FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
+ A+L+SVT +L FGE+IPQ+ICSRYGL +GA VR+L+ IC P+A+PI K+LD L
Sbjct: 98 WGAILISVTLILLFGEIIPQSICSRYGLAIGATVAPFVRVLVFICLPVAWPISKLLDFLL 157
Query: 121 GHSD-ALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
GH ALFRRA+LK LV HG EAGKGGELTHDETTII+GAL+L+EK ++AMTPI F
Sbjct: 158 GHRRAALFRRAELKTLVDFHGNEAGKGGELTHDETTIIAGALELSEKMVKDAMTPISDIF 217
Query: 180 SLDVNSKLD 188
+D+N+KLD
Sbjct: 218 VIDINAKLD 226
>AT2G14520.1 | Symbols: | CBS domain-containing protein |
chr2:6182362-6184648 REVERSE
Length = 423
Score = 235 bits (600), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 149/189 (78%), Gaps = 1/189 (0%)
Query: 1 SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
S+ LV+LE+L +SG+ ++ AA I+PVV+ QH LL TLL+CNA AMEALPI LD +
Sbjct: 38 SMSLVDLEVLAKSGTPRDRIHAAKILPVVKNQHLLLCTLLICNAAAMEALPIFLDALVTA 97
Query: 61 FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
+ A+L+SVT +L FGE+IPQ++CSR+GL +GA VR+L+ IC P+A+PI K+LD L
Sbjct: 98 WGAILISVTLILLFGEIIPQSVCSRHGLAIGATVAPFVRVLVWICLPVAWPISKLLDFLL 157
Query: 121 GHSD-ALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
GH ALFRRA+LK LV +HG EAGKGGELTHDETTII+GAL+L+EK A++AMTPI TF
Sbjct: 158 GHGRVALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKMAKDAMTPISDTF 217
Query: 180 SLDVNSKLD 188
+D+N+KLD
Sbjct: 218 VIDINAKLD 226
>AT5G52790.1 | Symbols: | CBS domain-containing protein-related |
chr5:21391740-21394327 REVERSE
Length = 500
Score = 228 bits (580), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 150/190 (78%), Gaps = 3/190 (1%)
Query: 1 SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
SL +VELE++ ++G ++K A I+P+V+ QH LL TLL+ NA AMEALPI +D +
Sbjct: 39 SLSIVELEVMIKAGEPHDRKNAEKILPLVKNQHLLLCTLLIGNALAMEALPIFVDSLLPA 98
Query: 61 FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
+ A+L+SVT +LAFGE+IPQA+CSRYGL +GA +LVR+++I+ +P++YPI K+LD L
Sbjct: 99 WGAILISVTLILAFGEIIPQAVCSRYGLSIGAKLSFLVRLIIIVFFPLSYPISKLLDLLL 158
Query: 121 G--HSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIEST 178
G HS L RA+LK+LV +HG EAGKGGELTHDETTIISGALD+++K+A++AMTP+
Sbjct: 159 GKRHS-TLLGRAELKSLVYMHGNEAGKGGELTHDETTIISGALDMSQKSAKDAMTPVSQI 217
Query: 179 FSLDVNSKLD 188
FSLD+N KLD
Sbjct: 218 FSLDINFKLD 227
>AT1G47330.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF21
(InterPro:IPR002550), Cystathionine beta-synthase, core
(InterPro:IPR000644); BEST Arabidopsis thaliana protein
match is: CBS domain-containing protein
(TAIR:AT2G14520.1); Has 6970 Blast hits to 6717 proteins
in 1361 species: Archae - 64; Bacteria - 4382; Metazoa -
390; Fungi - 183; Plants - 125; Viruses - 0; Other
Eukaryotes - 1826 (source: NCBI BLink). |
chr1:17351149-17353739 FORWARD
Length = 527
Score = 223 bits (569), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 146/189 (77%), Gaps = 1/189 (0%)
Query: 1 SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
SLGLV+LE+L +SG ++ A I PVV+ QH LL TLL+ N+ AMEALPI LDKI P
Sbjct: 38 SLGLVDLEVLIKSGRPQDRINAGKIFPVVKNQHLLLCTLLIGNSMAMEALPIFLDKIVPP 97
Query: 61 FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
++A+LLSVT +L FGE++PQA+C+RYGL VGA VR+L+++ +PI+YPI K+LD L
Sbjct: 98 WLAILLSVTLILVFGEIMPQAVCTRYGLKVGAIMAPFVRVLLVLFFPISYPISKVLDWML 157
Query: 121 GHSDA-LFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
G L RRA+LK V+ HG EAGKGG+LT DET+II+GAL+LTEKTA++AMTPI + F
Sbjct: 158 GKGHGVLLRRAELKTFVNFHGNEAGKGGDLTTDETSIITGALELTEKTAKDAMTPISNAF 217
Query: 180 SLDVNSKLD 188
SL++++ L+
Sbjct: 218 SLELDTPLN 226